Miyakogusa Predicted Gene

Lj0g3v0266239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266239.1 Non Characterized Hit- tr|H0X434|H0X434_OTOGA
Uncharacterized protein (Fragment) OS=Otolemur
garnett,33.58,3e-19,PHOSPHATIDYLINOSITOL
N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL
REGION PROTEI,CUFF.17551.1
         (167 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084540.1 | PIG-P protein | HC | chr2:35702173-35704047 | ...   282   9e-77
Medtr2g022850.1 | PIG-P protein | LC | chr2:7954000-7957420 | 20...   266   8e-72

>Medtr2g084540.1 | PIG-P protein | HC | chr2:35702173-35704047 |
           20130731
          Length = 168

 Score =  282 bits (722), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 139/168 (82%), Positives = 151/168 (89%), Gaps = 1/168 (0%)

Query: 1   MESPHSVNSPRRTLSLSRQRRPYASFPDQDDKT-SGFGLSGDHGPKPSEVYGFLGSITTV 59
           MESP SVNSPRRTLSLSR+RR   SF D DDK  S   LS DHGPKPSEVYGF+GSITTV
Sbjct: 1   MESPRSVNSPRRTLSLSRKRRATVSFLDSDDKNNSASALSADHGPKPSEVYGFVGSITTV 60

Query: 60  VASVIFLVWAYVPESWLHSIGITYYPSRYWALAVPTYVMVSIVLMLGFYIGLNFISTPSP 119
           VA+VIFLVWAYVPESWLHSIGI+YYPSRYWALAVPTY+MV+IVLML FYIGLNF+STPSP
Sbjct: 61  VATVIFLVWAYVPESWLHSIGISYYPSRYWALAVPTYLMVTIVLMLVFYIGLNFMSTPSP 120

Query: 120 ASIYTVFDEFSRDPLSLDCSLAGEEKPIDPISDIGIDRINDVMFNNAA 167
           ASI TV+DEFSRDPL+LD S+ G+EKPIDPISDIGIDRIND MFNN+A
Sbjct: 121 ASINTVYDEFSRDPLTLDSSVEGDEKPIDPISDIGIDRINDAMFNNSA 168


>Medtr2g022850.1 | PIG-P protein | LC | chr2:7954000-7957420 |
           20130731
          Length = 249

 Score =  266 bits (679), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 133/166 (80%), Positives = 144/166 (86%), Gaps = 1/166 (0%)

Query: 2   ESPHSVNSPRRTLSLSRQRRPYASFPDQDDKT-SGFGLSGDHGPKPSEVYGFLGSITTVV 60
           ESP SVNSPRRTLSLSR+RR   SF D DDK  S  GLS DHGPKPSEVYGF+GSITTVV
Sbjct: 83  ESPRSVNSPRRTLSLSRKRRATVSFLDSDDKNNSASGLSRDHGPKPSEVYGFVGSITTVV 142

Query: 61  ASVIFLVWAYVPESWLHSIGITYYPSRYWALAVPTYVMVSIVLMLGFYIGLNFISTPSPA 120
           A+VIFLVWAYVPESWLHSIGI+YYPSRYWALAVPTYVMV+IVLML FYIGLNF+STPSPA
Sbjct: 143 ATVIFLVWAYVPESWLHSIGISYYPSRYWALAVPTYVMVTIVLMLAFYIGLNFMSTPSPA 202

Query: 121 SIYTVFDEFSRDPLSLDCSLAGEEKPIDPISDIGIDRINDVMFNNA 166
           S+  VFDE+SRDPLS D     +EKPIDPISD+GIDRIND MF N+
Sbjct: 203 SLNAVFDEYSRDPLSRDFLEDKDEKPIDPISDVGIDRINDAMFCNS 248