Miyakogusa Predicted Gene

Lj0g3v0266139.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266139.1 Non Characterized Hit- tr|I1JGV4|I1JGV4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29324
PE,43.93,0.00000000006,seg,NULL; VQ,VQ,CUFF.17545.1
         (276 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g099400.1 | VQ motif protein | HC | chr3:45565108-45563608...   107   1e-23

>Medtr3g099400.1 | VQ motif protein | HC | chr3:45565108-45563608 |
           20130731
          Length = 310

 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 103/296 (34%), Gaps = 41/296 (13%)

Query: 16  RDHYLRHLNKLXXXXXXXXX--XXXXTFHNNLXXXXXXXXXXXXXXXXXXXXXXXXVYNI 73
           RD YLRHLNKL               TF                            VYNI
Sbjct: 21  RDQYLRHLNKLSHKISKPIINNKKQPTFE-----PIQPQTQTQTQNLNNPLQHQPPVYNI 75

Query: 74  NKNDFRDVVQKLTGSPAHDRISTXXXXXXXXXXX--------------TNRPPQLMNSAM 119
           NKNDFRDVVQKLTGSPAHDRI T                         TNRPP L+N   
Sbjct: 76  NKNDFRDVVQKLTGSPAHDRIITPPPIQQPKPQSSRLQRIRPPPLPHITNRPPPLLNHRP 135

Query: 120 PRXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXTVHAPAESPISAYMRDLQF 179
                                       R            TVHA AESPISAYMRDLQ 
Sbjct: 136 NLLQPQNFNFNFNAVNFNHNSNNFPGLGRPQAPLSPLPPFPTVHAAAESPISAYMRDLQN 195

Query: 180 LLPTMDSKNFSGFX-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXX 220
              T+DSK FSGF                                               
Sbjct: 196 FCSTIDSKGFSGFSPLPLPTVLPPQPEQQQQQENQPPPQQEVVPPPPPPATVAHSTSSFQ 255

Query: 221 XXXXXXXFGCLNSPMSSYPLLSPGRLPFSPNSGQLGFXXXXXXXXXXXXXXRWRGL 276
                  FGCLNS ++SYPLLSPG L FSPNSG LGF              RWR +
Sbjct: 256 MPSSPGPFGCLNSQLASYPLLSPGLL-FSPNSGNLGFPQLPLSPTVPAPSPRWREI 310