Miyakogusa Predicted Gene

Lj0g3v0266109.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266109.1 Non Characterized Hit- tr|I1KFA1|I1KFA1_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,76.32,0.00000005,
,CUFF.17544.1
         (38 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0004s0130.1 | structural constituent of cell wall protein, ...    60   6e-10
Medtr2g090365.1 | PHD finger and bromo-adjacent-like domain prot...    51   3e-07
Medtr2g090360.2 | structural constituent of cell wall protein, p...    49   1e-06
Medtr2g090360.1 | structural constituent of cell wall protein, p...    49   2e-06

>Medtr0004s0130.1 | structural constituent of cell wall protein,
          putative | HC | scaffold0004:37626-31693 | 20130731
          Length = 527

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 33/38 (86%)

Query: 1  MFPATSYSPPEYSLSQDVIATIEKSMKNSADNLMQCLE 38
          +FPA +Y+PPE SLSQDVIAT+EKSMK  ADNLM+ LE
Sbjct: 57 VFPAPAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLE 94


>Medtr2g090365.1 | PHD finger and bromo-adjacent-like domain
          protein, putative | HC | chr2:38471494-38475361 |
          20130731
          Length = 453

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 31/39 (79%), Gaps = 1/39 (2%)

Query: 1  MFPATSYSPPEYSLSQDVIATI-EKSMKNSADNLMQCLE 38
          + PAT+Y+ PE SLSQDVIATI EKSMK   DNLMQ L+
Sbjct: 47 IVPATAYNSPEVSLSQDVIATIVEKSMKTCTDNLMQFLD 85


>Medtr2g090360.2 | structural constituent of cell wall protein,
          putative | LC | chr2:38466128-38468084 | 20130731
          Length = 480

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)

Query: 2  FPATSYSPPEYSLSQDVIA-TIEKSMKNSADNLMQCLE 38
          FPAT+Y+ PE SLSQ+VIA T+EKSMK   D+LM+ LE
Sbjct: 35 FPATAYNSPEVSLSQEVIATTVEKSMKTCTDDLMRFLE 72


>Medtr2g090360.1 | structural constituent of cell wall protein,
          putative | LC | chr2:38464803-38468087 | 20130731
          Length = 500

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 31/38 (81%), Gaps = 1/38 (2%)

Query: 2  FPATSYSPPEYSLSQDVIA-TIEKSMKNSADNLMQCLE 38
          FPAT+Y+ PE SLSQ+VIA T+EKSMK   D+LM+ LE
Sbjct: 55 FPATAYNSPEVSLSQEVIATTVEKSMKTCTDDLMRFLE 92