Miyakogusa Predicted Gene
- Lj0g3v0265619.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0265619.2 Non Characterized Hit- tr|A2XVM7|A2XVM7_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,23.31,0.00000000002,CRM,RNA-binding, CRM domain; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; YhbY-like,RNA-binding,,CUFF.17523.2
(692 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g102850.2 | CRS2-associated factor 1 | HC | chr8:43308642-... 608 e-174
Medtr8g102850.1 | CRS2-associated factor 1 | HC | chr8:43308642-... 585 e-167
Medtr8g069825.1 | CRS2-associated factor 1 | HC | chr8:29482243-... 388 e-108
Medtr7g075885.1 | CRS2-associated factor 1 | HC | chr7:28515935-... 272 6e-73
Medtr0194s0020.1 | CRS2-associated factor 1 | HC | scaffold0194:... 252 9e-67
Medtr0194s0020.2 | CRS2-associated factor 1 | HC | scaffold0194:... 224 1e-58
Medtr0194s0020.3 | CRS2-associated factor 1 | HC | scaffold0194:... 188 1e-47
Medtr6g008410.1 | group IIA intron splicing facilitator CRS1 | H... 65 3e-10
Medtr6g084410.1 | CRS1/YhbY (CRM) domain protein | HC | chr6:315... 57 5e-08
Medtr1g475240.1 | CRS1/YhbY (CRM) domain protein | HC | chr1:332... 57 7e-08
Medtr1g075190.1 | CRS1/YhbY (CRM) domain protein | HC | chr1:332... 57 7e-08
Medtr4g126140.1 | CRS1/YhbY (CRM) domain protein | HC | chr4:524... 55 2e-07
Medtr8g066010.1 | group IIA intron splicing facilitator CRS1 | H... 54 4e-07
Medtr8g104340.3 | CRS1/YhbY (CRM) domain protein, putative | HC ... 52 1e-06
Medtr8g104340.1 | CRS1/YhbY (CRM) domain protein, putative | HC ... 52 2e-06
Medtr8g104340.2 | CRS1/YhbY (CRM) domain protein, putative | HC ... 52 2e-06
>Medtr8g102850.2 | CRS2-associated factor 1 | HC |
chr8:43308642-43312417 | 20130731
Length = 656
Score = 608 bits (1567), Expect = e-174, Method: Compositional matrix adjust.
Identities = 323/582 (55%), Positives = 394/582 (67%), Gaps = 29/582 (4%)
Query: 133 PSDVRIGEDGVSYVVDGAPFEFRYSYTETPAEKPVEIREP-VAPFGPDTVPRPWTGRNPL 191
P +V+I EDGVSYV++GAPFEF+YSYTETP KPV++REP PFGP T+PRPWTGR PL
Sbjct: 61 PENVKISEDGVSYVIEGAPFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPL 120
Query: 192 PPGKLKSFKVFGKLVLPPADKKGTEPVQSPGRCLEELGSRYVEYREEVMGEPLTQDEIND 251
PP K K K F VLPP KKG +PVQSPG L RYV REEV+GEPLT++EIN+
Sbjct: 121 PPSK-KKLKEFDSFVLPPPHKKGVKPVQSPGPFLPGTSPRYVMSREEVLGEPLTKEEINE 179
Query: 252 LVMRTRKSPSHLSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNVCHQLEERT 311
LV T KS L++GRDG HNML+N+H HW R+RVC+IKC GVCTVDMDNVC QLEE+T
Sbjct: 180 LVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMDNVCQQLEEKT 239
Query: 312 GGKIIYRKGGTVYLFRGRNYDYRTRPRFPLMLWKPVSPVYPRLVKQVPEGLTLEKATEMR 371
GGK+IYR+GG +YLFRGRNY+++TRPRFPLMLWKPV PVYPRL++QVPEGLTLE+ATEMR
Sbjct: 240 GGKVIYRRGGVIYLFRGRNYNHKTRPRFPLMLWKPVPPVYPRLIQQVPEGLTLEEATEMR 299
Query: 372 QKGSNLIPICKLGKNGVYCDLVKNVREAFEVCDLVRINCEGLTASDYRRIGAKLKDLVPC 431
QKG L PICKLGKNGVY +LV NVREAFE C+LVR+NC+GL SDYR+IGAKL+DLVPC
Sbjct: 300 QKGRTLTPICKLGKNGVYYNLVNNVREAFEECELVRVNCQGLNKSDYRKIGAKLRDLVPC 359
Query: 432 VLLSFENKHILIWRGLNWRSTF--LSNDGEEVNKINVDSEHSNTLPSDEQELSV----LN 485
LLS+EN+HIL+WRG NW+S+F L D +E K + D+++ TL S+ ++S N
Sbjct: 360 TLLSYENEHILMWRGRNWKSSFPDLVEDFKEATKADADNKNDKTLQSEALDVSTPSLNHN 419
Query: 486 SVEHLINEXXXXXXXXXXXXXXXCKVMVPCPSPSENSNLPVSVVTDATLIPVLTHEVDTT 545
VEH+ N KV P P++NS +SVV DA+L V +E +TT
Sbjct: 420 PVEHVSNLSHDTSISFCPDDVTVDKV----PCPTKNSKQSMSVVADASLTKV--YEAETT 473
Query: 546 E---DVLXXXXXXXXXXXXXXXXXXXXXXXIDGMGDPHIDKLQDGFRAAEVS------QP 596
D I G DPH D+L + AA+VS P
Sbjct: 474 NVATDSYGEPESCSNTSPGSNAMLGSRNSNIYGTVDPHADELLNDSGAADVSPLPRAAAP 533
Query: 597 SSSATLLLLEQAVKKGVALVLDEESLDADHIYQTTMAFAKSAPPEPVFKLPRKVVVQKCD 656
LLLEQAV++G ALVLD++SLDAD++Y+TT++FA+SAPP PVF RKV VQK D
Sbjct: 534 FMKGISLLLEQAVEQGNALVLDKDSLDADNVYRTTVSFAQSAPPGPVFMKHRKVAVQKSD 593
Query: 657 NQEG------STLETKGITTVMMKGEKMETSSKIRRKEDFGE 692
QE T T + K E S +IRRKE+F E
Sbjct: 594 KQEALTPETRETTTVTTKGTTVATKGKRERSPRIRRKENFDE 635
>Medtr8g102850.1 | CRS2-associated factor 1 | HC |
chr8:43308642-43312417 | 20130731
Length = 698
Score = 585 bits (1509), Expect = e-167, Method: Compositional matrix adjust.
Identities = 320/620 (51%), Positives = 396/620 (63%), Gaps = 63/620 (10%)
Query: 133 PSDVRIGEDGVSYVVDGAPFEFRYSYTETPAEKPVEIREP-VAPFGPDTVPRPWTGRNPL 191
P +V+I EDGVSYV++GAPFEF+YSYTETP KPV++REP PFGP T+PRPWTGR PL
Sbjct: 61 PENVKISEDGVSYVIEGAPFEFKYSYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPL 120
Query: 192 PPGKLKSFKVFGKLVLPPADKKGTEPVQSPGRCLEELGSRYVEYREEVMGEPLTQDEIND 251
PP K K K F VLPP KKG +PVQSPG L RYV REEV+GEPLT++EIN+
Sbjct: 121 PPSK-KKLKEFDSFVLPPPHKKGVKPVQSPGPFLPGTSPRYVMSREEVLGEPLTKEEINE 179
Query: 252 LVMRTRKSPSHLSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNVCHQLEERT 311
LV T KS L++GRDG HNML+N+H HW R+RVC+IKC GVCTVDMDNVC QLEE+T
Sbjct: 180 LVRSTLKSSRQLNLGRDGFIHNMLDNIHAHWKRRRVCKIKCIGVCTVDMDNVCQQLEEKT 239
Query: 312 GGKIIYRKGGTVYLFRGRNYDYRTRPRFPLMLWKPVSPVYPRLVKQVPEGLTLEKATEMR 371
GGK+IYR+GG +YLFRGRNY+++TRPRFPLMLWKPV PVYPRL++QVPEGLTLE+ATEMR
Sbjct: 240 GGKVIYRRGGVIYLFRGRNYNHKTRPRFPLMLWKPVPPVYPRLIQQVPEGLTLEEATEMR 299
Query: 372 QKGSNLIPICKLGKNGVYCDLVKNVREAFEVCDLVRINCEGLTASDYRRIGAKLKDLVPC 431
QKG L PICKLGKNGVY +LV NVREAFE C+LVR+NC+GL SDYR+IGAKL+DLVPC
Sbjct: 300 QKGRTLTPICKLGKNGVYYNLVNNVREAFEECELVRVNCQGLNKSDYRKIGAKLRDLVPC 359
Query: 432 VLLSFENKHILIWRGLNWRSTF--LSNDGEEVNKINVDSEHSNTLPSDEQELSV----LN 485
LLS+EN+HIL+WRG NW+S+F L D +E K + D+++ TL S+ ++S N
Sbjct: 360 TLLSYENEHILMWRGRNWKSSFPDLVEDFKEATKADADNKNDKTLQSEALDVSTPSLNHN 419
Query: 486 SVEHLINEXXXXXXXXXXXXXXXCKVMVPCPSPSENSNLPV---------------SVVT 530
VEH+ N KV PCP+ + ++ V +V T
Sbjct: 420 PVEHVSNLSHDTSISFCPDDVTVDKV--PCPTKNSKQSMSVVADASLTKVYEAETTNVAT 477
Query: 531 DATLIP----------VLTHEVDTTE-------------DVLXXXXX---XXXXXXXXXX 564
D+ P ++H+ TE D++
Sbjct: 478 DSYGEPESCSNTSPGMTISHDSRHTECPSNAISDSHGTSDIMDDKGFGDCLSTSISGSNA 537
Query: 565 XXXXXXXXIDGMGDPHIDKLQDGFRAAEVS------QPSSSATLLLLEQAVKKGVALVLD 618
I G DPH D+L + AA+VS P LLLEQAV++G ALVLD
Sbjct: 538 MLGSRNSNIYGTVDPHADELLNDSGAADVSPLPRAAAPFMKGISLLLEQAVEQGNALVLD 597
Query: 619 EESLDADHIYQTTMAFAKSAPPEPVFKLPRKVVVQKCDNQEG------STLETKGITTVM 672
++SLDAD++Y+TT++FA+SAPP PVF RKV VQK D QE T T +
Sbjct: 598 KDSLDADNVYRTTVSFAQSAPPGPVFMKHRKVAVQKSDKQEALTPETRETTTVTTKGTTV 657
Query: 673 MKGEKMETSSKIRRKEDFGE 692
K E S +IRRKE+F E
Sbjct: 658 ATKGKRERSPRIRRKENFDE 677
>Medtr8g069825.1 | CRS2-associated factor 1 | HC |
chr8:29482243-29475430 | 20130731
Length = 574
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 240/324 (74%), Gaps = 12/324 (3%)
Query: 136 VRIGEDGVSYVVDGAPFEFRYSYTETPAEKPVEIREPV-APFGPDTVPRPWTGRNPLPPG 194
V IGE GVSY++ GAPFEF++SY+ETP KP+ IREP PF P T+PRPWTG+ PL
Sbjct: 87 VIIGESGVSYLLPGAPFEFQFSYSETPKVKPIAIREPAFLPFEPPTMPRPWTGKAPLKKS 146
Query: 195 KLKSFKVFGKLVLPPADKKGTEPVQSPG-----RCLEELGSRYVEYREEVMGEPLTQDEI 249
K K+ +F PP KG + V+ PG + EE SR EE++GEPL + E+
Sbjct: 147 K-KNIPLFDSFNPPPEGMKGVKKVEMPGPFPVGKFPEEGVSR-----EEILGEPLKKWEV 200
Query: 250 NDLVMRTRKSPSHLSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNVCHQLEE 309
LV +++GRDGLTHNMLE +H+HW R+RVC+I+C+GV TVDMDNVC +EE
Sbjct: 201 QMLVKPMMADNRQVNLGRDGLTHNMLELIHSHWKRRRVCKIRCKGVPTVDMDNVCRHIEE 260
Query: 310 RTGGKIIYRKGGTVYLFRGRNYDYRTRPRFPLMLWKPVSPVYPRLVKQVPEGLTLEKATE 369
+ GGKII+R GG VYLFRGRNY+YRTRP++P+MLWKP +PVYP+L++ PEGLT +A E
Sbjct: 261 KAGGKIIHRAGGVVYLFRGRNYNYRTRPQYPVMLWKPAAPVYPKLIQDAPEGLTKAEADE 320
Query: 370 MRQKGSNLIPICKLGKNGVYCDLVKNVREAFEVCDLVRINCEGLTASDYRRIGAKLKDLV 429
+R KG +L+PICKL KNGVY LVK+VR+AFE LV+I+C+GL SDY+++GAKLKDLV
Sbjct: 321 LRMKGKSLLPICKLAKNGVYTTLVKDVRDAFEGSHLVKIDCKGLDPSDYKKLGAKLKDLV 380
Query: 430 PCVLLSFENKHILIWRGLNWRSTF 453
PCVLLSF+++ +LIWRG W+S +
Sbjct: 381 PCVLLSFDDEQVLIWRGKGWKSMY 404
>Medtr7g075885.1 | CRS2-associated factor 1 | HC |
chr7:28515935-28511869 | 20130731
Length = 407
Score = 272 bits (696), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 195/312 (62%), Gaps = 27/312 (8%)
Query: 151 PFEFRYSYTETPAE-KPVEIREP-VAPFGPDTVPRPWTGRNPLPPGKLKSFKVFGKLVLP 208
PF+FR+SYTE+ +P+ +REP +PFGPD + R WTG + P
Sbjct: 86 PFDFRFSYTESSQTVRPIGLREPKYSPFGPDRIDREWTG-----------------VCAP 128
Query: 209 PADKKGTEPVQSPGRCLEELGSRYVEYREEVMGEPLTQDEINDLVMRTR--KSPSHLSIG 266
D K E G +L + RE V G+ LT E LV++ K+ +++G
Sbjct: 129 AVDPKVKE---LDGEEDPKLEDERKKKREHVQGDALTNAERKALVLQCERGKTKRQVNMG 185
Query: 267 RDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNVCHQLEERTGGKIIYRKGGTVYLF 326
RDGLTHNML +H HW +IKC GV TVDM NVC QLE++T GK+I+R GGT+ L+
Sbjct: 186 RDGLTHNMLIEIHNHWKYTEAVRIKCMGVPTVDMKNVCTQLEDKTFGKVIFRHGGTLILY 245
Query: 327 RGRNYDYRTRPRFPLMLWKPVSPVYPRLVKQVPEGLTLEKATEMRQKGSNLIPICKLGKN 386
RGRNY+ R RP P+MLWKP PVYPRL+K +GL++E+ MR++G + + KL KN
Sbjct: 246 RGRNYNSRKRPAIPVMLWKPHEPVYPRLIKTTIDGLSIEETKAMRKRGLAVPALTKLAKN 305
Query: 387 GVYCDLVKNVREAFEVCDLVRINCEGLTASDYRRIGAKLKDLVPCVLLSFENKHILIWRG 446
G Y LV VR+AF C+LVRI+C+GL DY++IG KL+DLVPCVL++F+ + I++WRG
Sbjct: 306 GYYAHLVTMVRDAFLTCELVRIDCQGLERKDYKKIGCKLRDLVPCVLVTFDKEQIVVWRG 365
Query: 447 LNWRSTFLSNDG 458
+++ S DG
Sbjct: 366 NDYK---YSKDG 374
>Medtr0194s0020.1 | CRS2-associated factor 1 | HC |
scaffold0194:8811-11324 | 20130731
Length = 333
Score = 252 bits (643), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 193/326 (59%), Gaps = 44/326 (13%)
Query: 127 NRFLPGPSDVRIGEDGVSYVVDGAPFEFRYSYTET-PAEKPVEIREP--VAPFGPDTVPR 183
N+F P ++ + D PF F YSY+ET P+ KP+ RE +PFGP + R
Sbjct: 38 NKFKQDPPNLPLKSD--------LPFNFMYSYSETHPSIKPISFRESPKFSPFGPGRLDR 89
Query: 184 PWTGRNPLPPGKLKSFKVFGKLVLPPADKKGTEPVQSPGRCLEELGSRYVEYREEVMGEP 243
WTG + PVQ + +R+ E R V+G P
Sbjct: 90 KWTG--------------------------TSAPVQH-----QVDRNRFEEDRNRVLGAP 118
Query: 244 LTQDEINDLVMRTRKS--PSHLSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMD 301
L E+ +LV R R S +++G+ G+THN L+++H HW + +IKC GV T+DMD
Sbjct: 119 LEDQEVAELVERYRHSDCSRQINLGKGGVTHNTLDDIHNHWKKAEAVRIKCLGVPTLDMD 178
Query: 302 NVCHQLEERTGGKIIYRKGGTVYLFRGRNYDYRTRPRFPLMLWKPVSPVYPRLVKQVPEG 361
N+C LE+++GGKIIYR + L+RGR+YD RP PLMLWKP +P+YP+LVK V EG
Sbjct: 179 NICFHLEDKSGGKIIYRNMNILILYRGRHYDPNNRPVIPLMLWKPYAPIYPKLVKNVIEG 238
Query: 362 LTLEKATEMRQKGSNLIPICKLGKNGVYCDLVKNVREAFEVCDLVRINCEGLTASDYRRI 421
LT EK E+R G N P+ KL +NGVY ++V+ VREA + ++VR++C + SD ++I
Sbjct: 239 LTHEKTKELRNMGLNSHPLMKLTRNGVYVNVVERVREALKTEEVVRLDCTHVGTSDCKKI 298
Query: 422 GAKLKDLVPCVLLSFENKHILIWRGL 447
G KL+DLVPCV + F+++ I++WRG+
Sbjct: 299 GVKLRDLVPCVPILFKDEQIVLWRGI 324
>Medtr0194s0020.2 | CRS2-associated factor 1 | HC |
scaffold0194:8811-11324 | 20130731
Length = 306
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 175/305 (57%), Gaps = 44/305 (14%)
Query: 127 NRFLPGPSDVRIGEDGVSYVVDGAPFEFRYSYTET-PAEKPVEIREP--VAPFGPDTVPR 183
N+F P ++ + D PF F YSY+ET P+ KP+ RE +PFGP + R
Sbjct: 38 NKFKQDPPNLPLKSD--------LPFNFMYSYSETHPSIKPISFRESPKFSPFGPGRLDR 89
Query: 184 PWTGRNPLPPGKLKSFKVFGKLVLPPADKKGTEPVQSPGRCLEELGSRYVEYREEVMGEP 243
WTG + PVQ + +R+ E R V+G P
Sbjct: 90 KWTG--------------------------TSAPVQH-----QVDRNRFEEDRNRVLGAP 118
Query: 244 LTQDEINDLVMRTRKS--PSHLSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMD 301
L E+ +LV R R S +++G+ G+THN L+++H HW + +IKC GV T+DMD
Sbjct: 119 LEDQEVAELVERYRHSDCSRQINLGKGGVTHNTLDDIHNHWKKAEAVRIKCLGVPTLDMD 178
Query: 302 NVCHQLEERTGGKIIYRKGGTVYLFRGRNYDYRTRPRFPLMLWKPVSPVYPRLVKQVPEG 361
N+C LE+++GGKIIYR + L+RGR+YD RP PLMLWKP +P+YP+LVK V EG
Sbjct: 179 NICFHLEDKSGGKIIYRNMNILILYRGRHYDPNNRPVIPLMLWKPYAPIYPKLVKNVIEG 238
Query: 362 LTLEKATEMRQKGSNLIPICKLGKNGVYCDLVKNVREAFEVCDLVRINCEGLTASDYRRI 421
LT EK E+R G N P+ KL +NGVY ++V+ VREA + ++VR++C + SD ++I
Sbjct: 239 LTHEKTKELRNMGLNSHPLMKLTRNGVYVNVVERVREALKTEEVVRLDCTHVGTSDCKKI 298
Query: 422 GAKLK 426
G KL+
Sbjct: 299 GVKLR 303
>Medtr0194s0020.3 | CRS2-associated factor 1 | HC |
scaffold0194:8811-11315 | 20130731
Length = 262
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/264 (40%), Positives = 145/264 (54%), Gaps = 44/264 (16%)
Query: 127 NRFLPGPSDVRIGEDGVSYVVDGAPFEFRYSYTET-PAEKPVEIREP--VAPFGPDTVPR 183
N+F P ++ + D PF F YSY+ET P+ KP+ RE +PFGP + R
Sbjct: 38 NKFKQDPPNLPLKSD--------LPFNFMYSYSETHPSIKPISFRESPKFSPFGPGRLDR 89
Query: 184 PWTGRNPLPPGKLKSFKVFGKLVLPPADKKGTEPVQSPGRCLEELGSRYVEYREEVMGEP 243
WTG + PVQ + +R+ E R V+G P
Sbjct: 90 KWTG--------------------------TSAPVQH-----QVDRNRFEEDRNRVLGAP 118
Query: 244 LTQDEINDLVMRTRKS--PSHLSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMD 301
L E+ +LV R R S +++G+ G+THN L+++H HW + +IKC GV T+DMD
Sbjct: 119 LEDQEVAELVERYRHSDCSRQINLGKGGVTHNTLDDIHNHWKKAEAVRIKCLGVPTLDMD 178
Query: 302 NVCHQLEERTGGKIIYRKGGTVYLFRGRNYDYRTRPRFPLMLWKPVSPVYPRLVKQVPEG 361
N+C LE+++GGKIIYR + L+RGR+YD RP PLMLWKP +P+YP+LVK V EG
Sbjct: 179 NICFHLEDKSGGKIIYRNMNILILYRGRHYDPNNRPVIPLMLWKPYAPIYPKLVKNVIEG 238
Query: 362 LTLEKATEMRQKGSNLIPICKLGK 385
LT EK E+R G N P+ KL K
Sbjct: 239 LTHEKTKELRNMGLNSHPLMKLSK 262
>Medtr6g008410.1 | group IIA intron splicing facilitator CRS1 | HC |
chr6:2256928-2245549 | 20130731
Length = 1045
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 244 LTQDEINDLVMRTRKSPSHLSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNV 303
LT EI L + + +G+ G+T ++ +H W R V ++ C +C ++M
Sbjct: 151 LTDGEILRLRELGYQMKQKIKVGKAGVTEGIVNGIHERWRRSEVVRVVCEDLCRINMKRT 210
Query: 304 CHQLEERTGGKIIYRKGGTVYLFRGRNYDY 333
LE +TGG +++R G + L+RG +Y Y
Sbjct: 211 HDILERKTGGLVVWRSGSKIILYRGIDYKY 240
>Medtr6g084410.1 | CRS1/YhbY (CRM) domain protein | HC |
chr6:31586826-31594407 | 20130731
Length = 820
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 250 NDLVMRTRKSPSHL----SIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNVCH 305
++L+ R R+ HL S+ + GLT ++E +H W ++ + ++K +M + H
Sbjct: 215 DELLRRLRREGMHLRERVSVPKAGLTQEVMEKIHESWRKKELVRLKFHEELAKNM-RIAH 273
Query: 306 QL-EERTGGKIIYRKGGTVYLFRGRNY 331
Q+ E RTGG + +R G + ++RG+NY
Sbjct: 274 QIVERRTGGLVTWRAGSVMIVYRGKNY 300
>Medtr1g475240.1 | CRS1/YhbY (CRM) domain protein | HC |
chr1:33263693-33269751 | 20130731
Length = 838
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 244 LTQDEINDLVMRTRKSPSHLSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNV 303
L + E+ L+ T IG G+T ++ +H W + ++K G ++M +
Sbjct: 211 LPESELRRLLKLTFMKKHKTRIGGGGVTQAAVDKIHERWKTSEIVRLKFEGDAALNMKRM 270
Query: 304 CHQLEERTGGKIIYRKGGTVYLFRGRNY 331
LE++TGG +I+R G +V L+RG +Y
Sbjct: 271 HEILEKKTGGLVIWRSGNSVSLYRGVSY 298
>Medtr1g075190.1 | CRS1/YhbY (CRM) domain protein | HC |
chr1:33243553-33249532 | 20130731
Length = 838
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%)
Query: 244 LTQDEINDLVMRTRKSPSHLSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNV 303
L + E+ L+ T IG G+T ++ +H W + ++K G ++M +
Sbjct: 211 LPESELRRLLKLTFMKKHKTRIGGGGVTQAAVDKIHERWKTSEIVRLKFEGDAALNMKRM 270
Query: 304 CHQLEERTGGKIIYRKGGTVYLFRGRNY 331
LE++TGG +I+R G +V L+RG +Y
Sbjct: 271 HEILEKKTGGLVIWRSGNSVSLYRGVSY 298
>Medtr4g126140.1 | CRS1/YhbY (CRM) domain protein | HC |
chr4:52429589-52424702 | 20130731
Length = 744
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 263 LSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNVCHQLEERTGGKIIYRKGGT 322
S+G G+T +++ +H WM V + K + +M LE +TGG +++R G +
Sbjct: 194 FSVGVAGITQELVDAIHEKWMVDEVVKFKFDSPLSANMKRAHQILESKTGGIVVWRSGSS 253
Query: 323 VYLFRGRNY 331
+ L+RG +Y
Sbjct: 254 IVLYRGMSY 262
>Medtr8g066010.1 | group IIA intron splicing facilitator CRS1 | HC |
chr8:27412601-27414644 | 20130731
Length = 373
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 263 LSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNVCHQLEERTGGKIIYRKGGT 322
+G G+TH +++ +H WM V + K + +M LE +TGG +++R G +
Sbjct: 9 FGVGVAGITHELVDAIHEKWMVDEVVKFKFDSPLSANMKRANQILESKTGGIVVWRLGSS 68
Query: 323 VYLFRGRNY 331
+ L+RG +Y
Sbjct: 69 IVLYRGMSY 77
>Medtr8g104340.3 | CRS1/YhbY (CRM) domain protein, putative | HC |
chr8:43946209-43952280 | 20130731
Length = 463
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 49/89 (55%)
Query: 244 LTQDEINDLVMRTRKSPSHLSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNV 303
L ++E++ L +SI + GLT ++L+ +H W + ++K +M+
Sbjct: 106 LEKEELSRLRTMGIHLKQKISIPKSGLTRSVLQRIHHQWNTNELVKLKFHQQLVQNMNLA 165
Query: 304 CHQLEERTGGKIIYRKGGTVYLFRGRNYD 332
+ ++ RTGG +I+R G ++++RG++Y
Sbjct: 166 HNIVQRRTGGLVIWRSGSVMWVYRGKSYQ 194
>Medtr8g104340.1 | CRS1/YhbY (CRM) domain protein, putative | HC |
chr8:43946209-43953260 | 20130731
Length = 634
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 42/69 (60%)
Query: 263 LSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNVCHQLEERTGGKIIYRKGGT 322
+SI + GLT ++L+ +H W + ++K +M+ + ++ RTGG +I+R G
Sbjct: 125 ISIPKSGLTRSVLQRIHHQWNTNELVKLKFHQQLVQNMNLAHNIVQRRTGGLVIWRSGSV 184
Query: 323 VYLFRGRNY 331
++++RG++Y
Sbjct: 185 MWVYRGKSY 193
>Medtr8g104340.2 | CRS1/YhbY (CRM) domain protein, putative | HC |
chr8:43946209-43953260 | 20130731
Length = 523
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 42/69 (60%)
Query: 263 LSIGRDGLTHNMLENVHTHWMRQRVCQIKCRGVCTVDMDNVCHQLEERTGGKIIYRKGGT 322
+SI + GLT ++L+ +H W + ++K +M+ + ++ RTGG +I+R G
Sbjct: 125 ISIPKSGLTRSVLQRIHHQWNTNELVKLKFHQQLVQNMNLAHNIVQRRTGGLVIWRSGSV 184
Query: 323 VYLFRGRNY 331
++++RG++Y
Sbjct: 185 MWVYRGKSY 193