Miyakogusa Predicted Gene

Lj0g3v0265559.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0265559.1 Non Characterized Hit- tr|I1MTS4|I1MTS4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27624 PE,73.94,0,EB1
dimerisation domain-like,NULL; Calponin-homology domain,
CH-domain,Calponin homology domain; no ,CUFF.17509.1
         (198 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0036s0210.1 | RP/EB family microtubule-associated protein |...   287   4e-78
Medtr4g108330.1 | RP/EB family microtubule-associated protein | ...   255   2e-68
Medtr5g016520.1 | RP/EB family microtubule-associated protein | ...   162   1e-40

>Medtr0036s0210.1 | RP/EB family microtubule-associated protein | HC
           | scaffold0036:80265-85368 | 20130731
          Length = 274

 Score =  287 bits (735), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 141/180 (78%), Positives = 154/180 (85%), Gaps = 1/180 (0%)

Query: 3   QHIEVSRLVKGRPLDNLEFLQWMKRYCDSVNGGIMNENYNPVERRCKGGKDRNNRSLKSA 62
           +HIEV+RLVKGRPLDNLEFLQW+KRYCDSVNGGIMNENYNPVERR KGGKDRN +SL+S+
Sbjct: 88  KHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRIKGGKDRNVKSLRSS 147

Query: 63  KSLPVNTMNNSGSGHTLSPNKTCGPKQSRXXXXXXXXXXLAEIQALSKQVTDLKLSVDLL 122
           KSL  NT NN+GSG  LSPN+  GPK SR           AEIQALSKQVTDLK+SVDLL
Sbjct: 148 KSLQSNTTNNTGSGE-LSPNRNSGPKISRSSGGSDGTNSSAEIQALSKQVTDLKISVDLL 206

Query: 123 EKERDFYFSKLRDIEILCQTTELENEPMSVAVKKILYAADASESPLEEAQEYLNQTLHAV 182
           EKERDFYFSKLRDIEILCQT+ELENEP+SVA+KKILYAADA ES LEEAQ Y+NQTL  V
Sbjct: 207 EKERDFYFSKLRDIEILCQTSELENEPISVAIKKILYAADAKESALEEAQAYINQTLDDV 266


>Medtr4g108330.1 | RP/EB family microtubule-associated protein | HC
           | chr4:44937960-44942067 | 20130731
          Length = 290

 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/179 (68%), Positives = 144/179 (80%), Gaps = 2/179 (1%)

Query: 3   QHIEVSRLVKGRPLDNLEFLQWMKRYCDSVNGGIMNENYNPVERRCKGGKDRNNRSLKSA 62
           +HIEVSRLVKGRPLDNLEFLQW+KRYCDS+NGGIMNENYNPVERR K GKDR+  SLK +
Sbjct: 88  KHIEVSRLVKGRPLDNLEFLQWLKRYCDSINGGIMNENYNPVERRVKVGKDRS--SLKKS 145

Query: 63  KSLPVNTMNNSGSGHTLSPNKTCGPKQSRXXXXXXXXXXLAEIQALSKQVTDLKLSVDLL 122
           KSL  N MNNSGSG+TL PN+T   K  R           AEIQ LSK++TDLK +VD L
Sbjct: 146 KSLQTNIMNNSGSGNTLGPNRTSVAKPFRSSGGAGGDNSSAEIQTLSKEITDLKFTVDRL 205

Query: 123 EKERDFYFSKLRDIEILCQTTELENEPMSVAVKKILYAADASESPLEEAQEYLNQTLHA 181
           EKERDFYF+KLRD+EI+CQT E+E+ P++VA+KKILYA DA ES L+EAQ+YLNQ ++ 
Sbjct: 206 EKERDFYFAKLRDVEIICQTPEVEDIPVTVAIKKILYATDAKESALDEAQDYLNQAMNV 264


>Medtr5g016520.1 | RP/EB family microtubule-associated protein | HC
           | chr5:5934758-5937281 | 20130731
          Length = 333

 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/191 (49%), Positives = 119/191 (62%), Gaps = 16/191 (8%)

Query: 1   MWQHIEVSRLVKGRPLDNLEFLQWMKRYCDSVNGGIMNENYNPVERR--CKGGKDRNNRS 58
           + +HIEVS+LVKGRPLDNLEF+QWMKRYCDSVN G    +YNP+ERR  C+GG      S
Sbjct: 86  ITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNSG--QHSYNPLERREMCRGGG--REVS 141

Query: 59  LKSAKSLPVNTMNNSG-----SGHT-----LSPNKTCGPKQSRXXXXXXXXXXLAEIQAL 108
            KSA S P N   ++      S HT     +S      P  ++           +   A 
Sbjct: 142 KKSAHSQPSNKGGSTSHRPPQSSHTARRNDVSTANHANPVAAKAAKPAAAAAAASAAPAY 201

Query: 109 SKQVTDLKLSVDLLEKERDFYFSKLRDIEILCQTTELENEPMSVAVKKILYAADASESPL 168
            +Q+T+LKLS+D LEKERDFYF+KLRDIEILCQT E+E+  +  A++KILYA D + S L
Sbjct: 202 DQQITELKLSIDSLEKERDFYFAKLRDIEILCQTPEVEHSAVFAAIQKILYATDDNGSEL 261

Query: 169 EEAQEYLNQTL 179
           EEAQ  L   L
Sbjct: 262 EEAQAMLTSGL 272