Miyakogusa Predicted Gene

Lj0g3v0265009.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0265009.1 tr|A9PAL7|A9PAL7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595591 PE=2
SV=1,35.57,3e-19,seg,NULL; UGPI4_ARATH_Q84MC0;,NULL,CUFF.17492.1
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g105305.1 | glycoprotein membrane precursor GPI-anchored p...   307   3e-84
Medtr5g005710.1 | glycoprotein membrane precursor GPI-anchored p...   257   5e-69
Medtr7g113640.1 | glycoprotein membrane precursor GPI-anchored p...   115   3e-26
Medtr1g082770.1 | glycoprotein membrane precursor GPI-anchored p...   107   6e-24
Medtr1g082830.1 | glycoprotein membrane precursor GPI-anchored p...   100   6e-22
Medtr1g082790.1 | glycoprotein membrane precursor GPI-anchored p...    74   6e-14

>Medtr1g105305.1 | glycoprotein membrane precursor GPI-anchored
           protein | HC | chr1:47417106-47416033 | 20130731
          Length = 199

 Score =  307 bits (787), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 149/199 (74%), Positives = 166/199 (83%)

Query: 1   MVLPKFXXXXXXXXXXXXXXXXXYPTECADDEKDNLYQGINKYRASINLKALAKNENADC 60
           MVLPKF                 YP +C DDEKDNLYQGINKYRAS+NLK+L KN+NADC
Sbjct: 1   MVLPKFSPLFWILFSSYVIFLMNYPVKCDDDEKDNLYQGINKYRASLNLKSLTKNKNADC 60

Query: 61  LADQIAEQFKNQPCTNTTGANTVPGTEPQFSNYPNLLAKCHLAISDTQDRTVMPACVPNL 120
           LAD+IA+QFKNQPCTNTTGANTVPGTEPQFSNYPNLLAKC LAISDT+D  VMPACVP L
Sbjct: 61  LADKIADQFKNQPCTNTTGANTVPGTEPQFSNYPNLLAKCQLAISDTRDGAVMPACVPGL 120

Query: 121 VPSLVLSNFTGSLYSDSLNDTKYTGIGIGSEDNWIVVVLTTNTPAGNFAPYSSNGANLIS 180
              LVL+NFT SLYS +LNDT+YTGIGIGSEDNWIVVVLTT+TP GNFAPYSSN ANLIS
Sbjct: 121 ASGLVLANFTKSLYSQNLNDTQYTGIGIGSEDNWIVVVLTTDTPTGNFAPYSSNSANLIS 180

Query: 181 KMGLIHCSMLVLVGIVFLL 199
           K+G+I+CS+L+L G +FLL
Sbjct: 181 KVGMIYCSILLLAGKIFLL 199


>Medtr5g005710.1 | glycoprotein membrane precursor GPI-anchored
           protein | HC | chr5:583141-585062 | 20130731
          Length = 201

 Score =  257 bits (656), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 121/182 (66%), Positives = 149/182 (81%), Gaps = 6/182 (3%)

Query: 24  YPTECADDEKDNLYQGINKYRASINLKALAKNENADCLADQIAEQFKNQPCTNTTGANTV 83
           +   C  DE+D+LYQG+N YR S+NL +L KNENA+C A+++A+QFKN+PCTNTTGANT+
Sbjct: 20  HSVHCDHDEEDDLYQGVNMYRTSLNLTSLTKNENANCFAEKLADQFKNKPCTNTTGANTI 79

Query: 84  PGTEPQFSNYPNLLAKCHLAISDTQDRTVMPACVPNLVPSLVLSNFTGSLYSDSLNDTKY 143
           PGTEPQF NY +LL KCHL IS+T+D +VMPACVP LVPS+VLSNFT SLYS +LND+K+
Sbjct: 80  PGTEPQFPNYEDLLTKCHLNISNTRDGSVMPACVPGLVPSIVLSNFTQSLYSQNLNDSKF 139

Query: 144 TGIGIGSEDNWIVVVLTTNTPAGNFAPYS------SNGANLISKMGLIHCSMLVLVGIVF 197
           TGIGIGSEDNWIVVVLTTNT  G+F P S      SNG N I+K+GL++CS+L+LVG V 
Sbjct: 140 TGIGIGSEDNWIVVVLTTNTSDGSFVPESSSGDETSNGENFITKIGLVYCSLLLLVGNVI 199

Query: 198 LL 199
           L 
Sbjct: 200 LF 201


>Medtr7g113640.1 | glycoprotein membrane precursor GPI-anchored
           protein | HC | chr7:46835440-46833848 | 20130731
          Length = 195

 Score =  115 bits (287), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/144 (43%), Positives = 95/144 (65%), Gaps = 3/144 (2%)

Query: 29  ADDEKDNLYQGINKYRASINLKALAKNENADCLADQIAEQFKNQPCTNTTGANTV--PGT 86
           + D++D++ +GIN +R + NL  L KN+ A CLAD++AE+ ++ PC        V  PG 
Sbjct: 26  SSDKEDSVLKGINSFRQTKNLAPLNKNDKAHCLADEVAEEIEDTPCEKVNQYYPVSGPGG 85

Query: 87  EPQFSNYPNLLAKCHLAISDTQDRTVMPACVPNLVPSLVLSNFTGS-LYSDSLNDTKYTG 145
             +  N    + KC + I+ T D  ++P CV  L P++VLSN+T S +Y+  LN++KYTG
Sbjct: 86  NQRIPNLQKHIDKCDININTTTDGVILPVCVSKLEPTVVLSNYTHSDIYAKFLNNSKYTG 145

Query: 146 IGIGSEDNWIVVVLTTNTPAGNFA 169
           +G+GSED+W+V+VLTTNT  G F+
Sbjct: 146 VGLGSEDDWMVLVLTTNTTTGTFS 169


>Medtr1g082770.1 | glycoprotein membrane precursor GPI-anchored
           protein | HC | chr1:36835511-36836249 | 20130731
          Length = 201

 Score =  107 bits (268), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 88/148 (59%), Gaps = 3/148 (2%)

Query: 28  CADDEKDNLYQGINKYRASINLKALAKNENADCLADQIAEQFKNQPCTNTTGAN-TVPGT 86
           C + EKD L   IN YR  +NL  L K +   CLA++IA   +++ C         +PG 
Sbjct: 30  CGEKEKD-LLHDINTYRKVLNLPILEKTDKPSCLANKIANDLEHKHCEEFHNYYPNIPGK 88

Query: 87  EPQFSNYPNLLAKCHLAISDTQDRTVMPACVPNLVPSLVLSNFT-GSLYSDSLNDTKYTG 145
            P+  N+   + KC + I+ T+D  +MP CVP L    + SN+T  S ++  LN++KY  
Sbjct: 89  NPKIPNFEKSVEKCKININTTKDGVIMPMCVPKLDQDDLFSNYTKNSHFTKYLNNSKYII 148

Query: 146 IGIGSEDNWIVVVLTTNTPAGNFAPYSS 173
            G+GSED+W+V++++TNT +G+F+  +S
Sbjct: 149 AGVGSEDDWMVLIISTNTTSGDFSSANS 176


>Medtr1g082830.1 | glycoprotein membrane precursor GPI-anchored
           protein | LC | chr1:36846949-36847715 | 20130731
          Length = 218

 Score =  100 bits (250), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 4/171 (2%)

Query: 31  DEKDNLYQGINKYRASINLKALAKNENADCLADQIAEQFKNQPCTNTTGANTVPGTEPQF 90
           D  D+L   IN YR ++NL  L KN  A CLA++IA   +++ C      + +PG  P+ 
Sbjct: 47  DPDDDLLHDINTYRKALNLPILEKNYKASCLANRIAYDLEDKHCEYFHDFHPLPGINPEI 106

Query: 91  SNYPNLLAKCHLAISDTQDRTVMPACVPNLV-PSLVLSNFT-GSLYSDSLNDTKYTGIGI 148
            N+   + KC + I+ T+D  VMP CVP ++  + + SN+T  S ++  LN++KYT  G+
Sbjct: 107 PNFQRSVKKCDININTTRDGVVMPVCVPEIMHENDLFSNYTKNSRFTPYLNNSKYTLAGV 166

Query: 149 GSEDNWIVVVLTTNTPAGNF--APYSSNGANLISKMGLIHCSMLVLVGIVF 197
           G + + +V+++ TNT +G+F  A Y  +GA+      L+  + L L   +F
Sbjct: 167 GHDLDKMVLIIGTNTASGDFSSATYLLHGASKGRHWLLMTTAFLSLFVFLF 217


>Medtr1g082790.1 | glycoprotein membrane precursor GPI-anchored
           protein | HC | chr1:36838954-36840861 | 20130731
          Length = 168

 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)

Query: 25  PTECADDEKDNLYQGINKYRASINLKALAKNENADCLADQIAEQFKNQPCTNTTGANTVP 84
           P     D++++L   IN YR   NL  L +N +A CLA + A   K++ C +    + +P
Sbjct: 40  PWWRWGDKENDLLHDINIYRKVQNLPILEENYDASCLAIKFAYDLKDKHCEDFHDFHPLP 99

Query: 85  GTEPQFSNYPNLLAKCHLAISDTQDRTVMPACVPNLVPSLVLSNFT-GSLYSDSLNDTKY 143
              P   N+   + KC++ I+ T+D  +M  CVP L    + SN+T  S +++ LN++KY
Sbjct: 100 SRNPSIPNFQKSVWKCNITINTTKDWVLMRVCVPGLDEDDLFSNYTRDSHFTEYLNNSKY 159

Query: 144 T 144
           T
Sbjct: 160 T 160