Miyakogusa Predicted Gene

Lj0g3v0264869.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264869.2 tr|A2Q3V3|A2Q3V3_MEDTR C-5 cytosine-specific DNA
methylase; Vacuolar protein sorting-associated prot,78.94,0,GB DEF:
VPS13-LIKE PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
(VPS13),Vacuolar protei,CUFF.17733.2
         (1277 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g007250.1 | vacuolar protein sorting-associated protein, p...  2011   0.0  
Medtr4g123110.1 | calcium-dependent lipid-binding-like protein |...    60   2e-08
Medtr8g078970.1 | DUF1162 family protein | HC | chr8:33685838-33...    57   1e-07

>Medtr2g007250.1 | vacuolar protein sorting-associated protein,
            putative | HC | chr2:875474-913892 | 20130731
          Length = 3509

 Score = 2011 bits (5210), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 992/1282 (77%), Positives = 1088/1282 (84%), Gaps = 17/1282 (1%)

Query: 1    MDENDEQRLPHYRHSNSSDSLNEQRSSGFTHHYITVQLDGASMPSDPISMDLVGLTCFEV 60
            MDEN +Q L HYR  +SSDSLNEQRSSG  H YI VQL+G SMPS+PISMDLVGLTCF+ 
Sbjct: 2002 MDENADQ-LSHYRPYHSSDSLNEQRSSGLAHRYIMVQLEGTSMPSNPISMDLVGLTCFDA 2060

Query: 61   NFSKTYDQNGQGGRMNSGATFVVPVVFDVSMLRYSKLIRIYSTVVLLNATSTPLELRFDI 120
            NFSK+Y++NG  GRMN+  TFVVPVV DVS LRYSKLIR+YSTVVLLNATST LELRFDI
Sbjct: 2061 NFSKSYNENGNDGRMNTAPTFVVPVVLDVSALRYSKLIRVYSTVVLLNATSTSLELRFDI 2120

Query: 121  PFGVSPTILDXXXXXXXXXXXXXXAEAGCVRWRPTGNSYLWSEAHNLSNLLSITGDVGSL 180
            PFGV+P I D              AEAGCVRWRP GNSYLWSEAH LSNLLS+   VG+ 
Sbjct: 2121 PFGVAPRIFDPIHPGQQFPLPLHLAEAGCVRWRPVGNSYLWSEAHKLSNLLSLNTKVGNF 2180

Query: 181  KSFMCYPSLPSSHPFRCCMXXXXXXXXXXGRLKNNVSTDDAKR-YIHHLILSPPLVVYNY 239
            KSF+CYPS PSSHP+RCC+          GR+KNN+  DDAK+ YIHHLILS PLV+ N+
Sbjct: 2181 KSFICYPSHPSSHPYRCCISVKSISLTSSGRVKNNLLVDDAKKHYIHHLILSAPLVINNF 2240

Query: 240  LPEEMLLISESGGVDHTLKVSEVDTSVYHIDPSHDLGLKICIDGFKCSDFKFPRLETFCS 299
            LP+E+LLIS+SGGVDHT ++SEV+TS+YHIDPSHDLGL+I IDGFKC DFKFPRLETFC+
Sbjct: 2241 LPKEILLISKSGGVDHTARISEVETSIYHIDPSHDLGLEIYIDGFKCCDFKFPRLETFCT 2300

Query: 300  MAKFSETKFSFSETLILEPINSNGPVYVTVEKVMDAYSGSRELIIFVPFILYNCMGFPLC 359
            +AKFSETKFS SETLI E  NS+G +YVT EKVMDAYSGSRELIIFVPFILYNCMGFPLC
Sbjct: 2301 VAKFSETKFSLSETLIFESNNSSGHIYVTAEKVMDAYSGSRELIIFVPFILYNCMGFPLC 2360

Query: 360  VTETTGEANERGFVIPSYDDLGEKETFSYKKDGLSLLISNHELRADVPCTPMNHLKNHTI 419
            V E + E +ERGFVIPSY D G  ETFS KKDGLSLL SN+ L A V   P ++L +HTI
Sbjct: 2361 VKEASSETDERGFVIPSYYDAGVNETFSDKKDGLSLLASNNGLHASVSREPRSYLDSHTI 2420

Query: 420  SCREDGGPNFVSYKRNSLLFGNYHENLGRQQSKSDSVE------RLASTMRSSSQSTWKD 473
            SCR D  PN       S+ FGNY  NLGRQ+ KS+S        RL +T+ S  QSTW  
Sbjct: 2421 SCRRDDNPN-------SVFFGNYRGNLGRQKRKSNSSFQSSSFGRLKNTLSSGVQSTWNY 2473

Query: 474  SGPCNNEPERVWPCMYSPSPNSSVNDVFVKVSRCFPDDVRKQLPYSLWSNPFYLLPPSGS 533
            SG CNNE ERV P MYSPSP SSVND+FVK+S CF  D R  +PYSLWSN F LLP SGS
Sbjct: 2474 SGSCNNEHERVVPFMYSPSPTSSVNDIFVKMSGCFSKDARDHMPYSLWSNSFSLLPQSGS 2533

Query: 534  STIYVPQLSSNSAFILAVTSSSVAE-YAGRTHAITFQPRYVISNACSKEISYKQKGTDIM 592
            STI+VP L+SNSAFILAVTS SVAE Y GRT+AI FQPRYVISNACSKEI YKQKGTD+ 
Sbjct: 2534 STIFVPHLTSNSAFILAVTSISVAEPYGGRTNAIAFQPRYVISNACSKEIIYKQKGTDVT 2593

Query: 593  FYLGVGEHAHLHWTDTARELLVSICYNESGWQWSGSFLPDHLGDTLLKMRNFVSGTSNMI 652
            FYLG+GEHAHLHWTDT+RELLVSICYNE+GWQWSGSFLPDHLGDT LKMRNFV GTS+MI
Sbjct: 2594 FYLGIGEHAHLHWTDTSRELLVSICYNETGWQWSGSFLPDHLGDTQLKMRNFVLGTSSMI 2653

Query: 653  RVEVQNADISMGDEKVIGSIKGNSGTNLILLSDDGTGYMPYRIDNFSKERLRIYQQKCEM 712
            RVEVQNADISMGDEK++G+IKGNSGTNLILLSDD TGYMPYRIDNFSKE LRIYQQ+CE+
Sbjct: 2654 RVEVQNADISMGDEKIVGNIKGNSGTNLILLSDDDTGYMPYRIDNFSKEILRIYQQRCEV 2713

Query: 713  FDAVIHSYSSYPYTWDEPCYPCRLIVEVPGERVLGSYALDDVKEYMPVHLPSTSEKPERT 772
            FD VIHSY+S PYTWDEP YP RL+VEVPGERVLG YALDDVKEYMPV LPSTSEKPER 
Sbjct: 2714 FDTVIHSYASNPYTWDEPSYPHRLVVEVPGERVLGMYALDDVKEYMPVQLPSTSEKPERI 2773

Query: 773  FFLSVHAEGATKVLSVLDSNYHIFNDVKNSSVQHAAEKRVYDHSQVRPAEYKEKISICIQ 832
            FF+SVHAEGATKVLSVLDSNYHIFN+VK  SV +A EKR+YDH+QVRPAEYK+KISI I 
Sbjct: 2774 FFVSVHAEGATKVLSVLDSNYHIFNEVKKPSVPNATEKRLYDHNQVRPAEYKDKISISIP 2833

Query: 833  YIGISLINSYPQELLFACIKDIEINLLQSLDRQRLSMMISFIQIDNQLHSTPYPVLLSFN 892
             IGISLINSYPQELLFACI DI+INLLQSLDRQRLSM ISFIQIDNQL STPYPV+LSFN
Sbjct: 2834 CIGISLINSYPQELLFACINDIQINLLQSLDRQRLSMRISFIQIDNQLRSTPYPVMLSFN 2893

Query: 893  NGYRSCQVDNTKSRDDVMRTSIEKLNQKSFGSSSSNPVMCLEISKWRKKDISFISFEYIK 952
             GYRS QVD TK RDD  R+ IEK NQ +F SSSS+PV CLEISKW+KKD SF+SFE+IK
Sbjct: 2894 GGYRSRQVDYTKFRDDATRSRIEKSNQMNFSSSSSSPVFCLEISKWKKKDTSFLSFEHIK 2953

Query: 953  MRIADFHLEIEQGVILSLFEFFTNFSSGQQFGIVPSSNHYDGVSLKDSFSFVHTSENFRL 1012
            +R+ADF LEIEQ VILSLFEFFTN SSG Q+G  PSSN Y G SLKDS S V TSENFRL
Sbjct: 2954 LRMADFRLEIEQEVILSLFEFFTNISSGMQYGTKPSSNQYYGTSLKDS-SSVQTSENFRL 3012

Query: 1013 SADQRPLRIAPMFTGKSNRIASLPSVVPIGAPWQEIYLLARTKKKIYIEMLELAPIQLTL 1072
            + DQ PL  AP+F  KS +IASLPS+VPIGAPWQEIYLLART+KK+YIEM ELAPI+LTL
Sbjct: 3013 NGDQSPLGFAPIFNAKSKKIASLPSIVPIGAPWQEIYLLARTQKKVYIEMFELAPIKLTL 3072

Query: 1073 SFSSAPWMLHNRILTSKEFLIHRGLMALADVEGAHIYLKDLTIAHHMASWESIQQILIRH 1132
            SFSSAPWML NRILTSKEFLIHRGLMALADVEGAHIYLKD+TIAHH ASWESIQ+ILIRH
Sbjct: 3073 SFSSAPWMLRNRILTSKEFLIHRGLMALADVEGAHIYLKDITIAHHTASWESIQEILIRH 3132

Query: 1133 YNRQLLHETYKLFGSAGFIGNPLGFARSIGHGIRDFLSVPAKSIMQSPTGLIMGMAQGTT 1192
            YNRQLLHETYKLFGSAG IGNPLGFARS+GHGIRDFLSVPA +IM+SPTGLIMGMA+GTT
Sbjct: 3133 YNRQLLHETYKLFGSAGVIGNPLGFARSMGHGIRDFLSVPANNIMRSPTGLIMGMAEGTT 3192

Query: 1193 SLLSNTLYAISDATSQFSKAARKGIVAFTYDDQAVSRVEKHQATVSSDSKGVINEVLEGL 1252
            SLLSNTLYA+SDA SQFSK ARKGIVAFTYDDQ  SR+EK QATV+SDSKGVINEVLEGL
Sbjct: 3193 SLLSNTLYAVSDAASQFSKVARKGIVAFTYDDQIASRIEKQQATVASDSKGVINEVLEGL 3252

Query: 1253 TGLLQSPIRGAERHGLPGVLSG 1274
            TGLLQSPIRGAE+HGLPGVLSG
Sbjct: 3253 TGLLQSPIRGAEKHGLPGVLSG 3274


>Medtr4g123110.1 | calcium-dependent lipid-binding-like protein | HC |
            chr4:50875754-50826418 | 20130731
          Length = 4257

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/337 (20%), Positives = 150/337 (44%), Gaps = 31/337 (9%)

Query: 562  RTHAITFQPRYVISNACSKEISYKQKGTDIMFYLGVGEHAH-LHWTDTARELLVSICYNE 620
            RT  + FQP  + +N     +  +Q  T  + ++   +      W  +A+   + +  + 
Sbjct: 3422 RTKVVHFQPHTMFTNRIGCSLCLQQCDTQSVVWIHPTDPPKPFEWQSSAKVEFLKLRID- 3480

Query: 621  SGWQWSGSFLPDHLGDTLLKMRNFVSGTSNMIRVEVQNADISMGDEKVIGSIKGNSGTNL 680
             G++WS  F  ++ G   + ++  V      +RV V++       E V    + NS ++ 
Sbjct: 3481 -GYKWSTPFSVNYEGVMRISLKKEVGDERMQLRVAVRSGAKRSRFEVVF---RLNSLSS- 3535

Query: 681  ILLSDDGTGYMPYRIDN---FSKERLRIYQQKCEMFDAVIHSYSSYPYTWDEPCYPCRLI 737
                       PYR++N   F   R+R      + +  ++ + S+  + W++      L 
Sbjct: 3536 -----------PYRVENRSMFLPIRIRQADGIGDSWQLLLPN-SAASFLWEDLGRRRLLE 3583

Query: 738  VEVPGERVLGS--YALDDVKEYMPVHLPSTSEKPERTFFLSVHAEGATKVLSVLDSNYHI 795
            + V G   + S  Y +D++ ++ P+ +   ++ P R   +++  E  T V+ + D    I
Sbjct: 3584 LLVDGTDPMKSLKYDIDEISDHQPLQV---ADGPTRALRVTIVKEEKTNVVKISDWMPEI 3640

Query: 796  FNDVKNSSVQHAAEKRVYDHSQV-RPAEYKEKISICIQYIGISLINSYPQELLFACIKDI 854
               ++  S +H+         Q+    +++  I++ +  +G+S+I+  P+E+L+  I+++
Sbjct: 3641 -EPIRVLSRRHSLSVNDSQKQQLMSDTDFEFHINVDLAELGVSIIDHTPEEILYLSIQNL 3699

Query: 855  EINLLQSLDR--QRLSMMISFIQIDNQLHSTPYPVLL 889
             +     L     R  + +  +Q+DNQL  TP PVL 
Sbjct: 3700 VLAYSTGLGSGISRFKLRMCGLQVDNQLPLTPTPVLF 3736


>Medtr8g078970.1 | DUF1162 family protein | HC |
            chr8:33685838-33657743 | 20130731
          Length = 3164

 Score = 57.4 bits (137), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 85/234 (36%), Gaps = 40/234 (17%)

Query: 555  SVAEYAGRTHAITFQPRYVISNACSKEISYKQ------------------------KGTD 590
            SV E    +  +T  PRYVI N   + I+ +Q                        +G  
Sbjct: 2318 SVGEIVVPSQMVTLVPRYVICNKSEQSITVRQYYFQDEVEGVISINSKQRMSLPLKEGLT 2377

Query: 591  IMFYLGVGEH-AHLHWTDTARELL-VSICYNESGWQWSGSFLPDHLGDTLLKMRNFVSGT 648
                  V E     H  D+   LL V I  NE G  WSG      LG   LK R   + +
Sbjct: 2378 KKREFSVFERLIRKHRIDSDNSLLYVQIQTNEHGLGWSGPVCLASLGHFFLKFRKEGTTS 2437

Query: 649  SNMIRVEVQNADISMGDEKVIGSIKGNSGTNLIL-LSDDGTGYMPYRIDNFSKERLRIYQ 707
             N +    Q A + + +E          G+ L+L         +PYRI N        Y 
Sbjct: 2438 DNKM---TQFAAVHVAEE----------GSTLVLSFYKPPNSSLPYRIQNCLHSLSITYY 2484

Query: 708  QKCEMFDAVIHSYSSYPYTWDEPCYPCRLIVEVPGERVLGSYALDDVKEYMPVH 761
            QK  +   V+    S  Y WD+   P RL+V +     L    LD V+ + P +
Sbjct: 2485 QKGSLEPEVLGPAGSADYVWDDLTLPHRLVVRINDSLQLREIKLDKVRAWTPFY 2538