Miyakogusa Predicted Gene

Lj0g3v0264869.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264869.1 Non Characterized Hit- tr|I1M061|I1M061_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51915 PE,69.72,0,GB DEF:
VPS13-LIKE PROTEIN,NULL; VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
(VPS13),Vacuolar protei,CUFF.17733.1
         (1040 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g007250.1 | vacuolar protein sorting-associated protein, p...  1366   0.0  

>Medtr2g007250.1 | vacuolar protein sorting-associated protein,
            putative | HC | chr2:875474-913892 | 20130731
          Length = 3509

 Score = 1366 bits (3535), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 678/1034 (65%), Positives = 804/1034 (77%), Gaps = 10/1034 (0%)

Query: 6    KIFQSSPSKCKSGFE--CESGIERTSNVFSIELHLYGIRVHFHDSSCIIGTIMVPTSKTS 63
            K F+ S SKCKS F    ESGI R SN FSIEL L+GIR HFHDSSCIIG+I +PT K+S
Sbjct: 1099 KSFRVSSSKCKSDFGNLLESGIARMSNYFSIELQLFGIRAHFHDSSCIIGSITIPTCKSS 1158

Query: 64   LLLCEDNIDILSSSEGLVLTSSWGPRNFQDYLWGPSSENLSPILNVRVRKPQDKSSAVDL 123
            L  C+DN+DILSSSEGLVLTSSWGP NFQDYLWGP++ NLSPILNVRVRK Q+KSSAVDL
Sbjct: 1159 LSFCDDNMDILSSSEGLVLTSSWGPHNFQDYLWGPATANLSPILNVRVRKTQNKSSAVDL 1218

Query: 124  EISIGVQHVYCMLPSEYLSIIIGYFSLSDWAGDSSGQSSFEEP-----KIETGITYKFEI 178
            E+  G+QHVYCMLPSEYLSIIIGYFSLSDW G S  Q   +E      K E  ITYKFEI
Sbjct: 1219 EVCFGIQHVYCMLPSEYLSIIIGYFSLSDWGGYSGDQFPSDEQGDIVLKNEMNITYKFEI 1278

Query: 179  LDSVLILPVESNEYQFLKVEIPQLYCSFVENLGFDDAMKDIPTKCFVPIQKLAKRNSCLN 238
            LDS L+LPVE+NE++FLK+E+PQ+YCSF+ N GFDD +K+IPT+C VPI KLA+RN+CLN
Sbjct: 1279 LDSDLVLPVENNEHRFLKLELPQIYCSFIVNSGFDDVLKNIPTECLVPIHKLAQRNNCLN 1338

Query: 239  VFGRDLFVSFLLYKNDMLGLATIE-NAEFISTSLIAPINADVWVRIPCRGVTNCKNYSPS 297
            +FGRDL +SFLLY N++LGL T E N EF++ SLIAP+NADVWVRIP  G +N K+ S S
Sbjct: 1339 IFGRDLNISFLLYTNNILGLGTNEWNTEFVTISLIAPLNADVWVRIPLGGESNYKS-SSS 1397

Query: 298  ICFMTSIRSCQLIAEDSHCLDGCLAIRDVIEEFSTIGDQSKCFKSDVLQFLHSKRSLMET 357
            IC MT I SC +IAED +  DGC+A+ DVIE FS+I DQS CFK+DVLQFL SKRSL  T
Sbjct: 1398 ICLMTCISSCHIIAEDIYFFDGCMALWDVIEGFSSIDDQSNCFKTDVLQFLQSKRSLKAT 1457

Query: 358  GVNNPTPMTSTIVLTEVKCCTESLLISCCHRHGDFVKLISKGDLRFTCAASLIDDSLEWL 417
            G  + T M S  +LTEVKCCT+SL+IS CHRH  FV+ ISK DL+FTC+ASL+DDSL WL
Sbjct: 1458 GATSSTLMPSNSILTEVKCCTQSLMISFCHRHEGFVEPISKSDLQFTCSASLVDDSLVWL 1517

Query: 418  ELGFSSLAFYSSHNSVLAKCTSTPISTVVLGICLSKSVDFKNELSFHLPSLDIWLYLSEW 477
            +L FS L  +SSH+SVLAKC ST  S  VLGIC SKS+D  NELS  L SLDIWL+LSEW
Sbjct: 1518 DLRFSRLVIFSSHDSVLAKCASTSCSMFVLGICFSKSIDNMNELSLCLSSLDIWLHLSEW 1577

Query: 478  TEVFKFLNDLSVHLEETPIDVASMSLPXXXXXXXXXXXXXXXXCSLDSEGASAPFATQEI 537
            TE+  FLN L +  E+TPI+ AS  L                    DSE  S PF  Q+ 
Sbjct: 1578 TEIVNFLNHLYLPSEKTPINAASEHLSVDTGISIKEAEVKDDSSFHDSESTSIPFTIQDN 1637

Query: 538  ENVVLMTIRSKNACVKFYIPVSASEEPCVEFQIAESLEVTPLRVSSDVIEEKDTKFLTVS 597
            EN VL+ IRS+N  + F+IP+  SEEP VE Q A+   +T L V SD++EEKD +FLTVS
Sbjct: 1638 ENAVLLIIRSENVRITFHIPIWTSEEPHVELQHAKRQNLTTLSVPSDILEEKDAEFLTVS 1697

Query: 598  FNVNDFDLVMRSRDIHLKSNMEKLSCVIIIVENGRHTSWPLLDIIQVHMDTVLCKNQTNT 657
              VN F+LV+R+RDI LKSN+E+LS V+  V NG HTS PLLDI+QVHMD VL K+ T  
Sbjct: 1698 IEVNGFELVLRNRDIQLKSNIERLSSVMTFVVNGSHTSLPLLDIVQVHMDAVLSKSDTGN 1757

Query: 658  IELKVEILCDHADVWLSHPTLLLLGAVKFDVPKSGSSQYSTSDITFKFQMRKVSILLTDG 717
              + +E++CDH+DVWLSHP   L GA+KFD PKS SSQ ST  I+FKFQ+RKVS+LLTDG
Sbjct: 1758 TTVNMELICDHSDVWLSHPAFYLCGALKFDGPKSESSQNSTGSISFKFQLRKVSVLLTDG 1817

Query: 718  KWSYNGPQLEILVRTILFHAIAIGKHVDCSITGDLQVNYKNIEKVSWEPFIEPWQFLLTL 777
            KWSYNGPQLEILVR+ILFHA A GKH++CS TGDLQVNYKNI KV+WEPF+EPW FL T+
Sbjct: 1818 KWSYNGPQLEILVRSILFHASACGKHLECSFTGDLQVNYKNIGKVAWEPFVEPWHFLFTM 1877

Query: 778  VRDQEMNVLPNRPVSTDIVLGSRTQLNINITESLVECVSHAIEILNDAWGLKGSKDHEGK 837
            VRDQE+++LPNR +STDI+L S TQLNINITESLVECVS   E+L+DA GL G KDHEG 
Sbjct: 1878 VRDQEISILPNRSLSTDIILESTTQLNINITESLVECVSRTAEMLDDALGLMGLKDHEGN 1937

Query: 838  ELSHSSCPQNMSSKRCAAPYVLQNLTSVPLLYHIYHGSSNPDEIFESDENPANYVQPGSA 897
            +L H  C + + +++C APYV+QNLTS PLLYH+YHG  NP++I++ D N A  VQPGSA
Sbjct: 1938 KLLHPPCSEYIFARKCVAPYVIQNLTSAPLLYHVYHGHINPNDIYDLDINHAKCVQPGSA 1997

Query: 898  ISVYMDENDEQRLPHYRHSNSSDSLNEQRSSGFTHHYITVQLDGASMPSDPISMDLVGLT 957
             ++YMDEN +Q L HYR  +SSDSLNEQRSSG  H YI VQL+G SMPS+PISMDLVGLT
Sbjct: 1998 STIYMDENADQ-LSHYRPYHSSDSLNEQRSSGLAHRYIMVQLEGTSMPSNPISMDLVGLT 2056

Query: 958  CFEVNFSKTYDQNGQGGRMNSGATFVVPVVFDVSMLRYSKLIRIYSTVVLLNATSTPLEL 1017
            CF+ NFSK+Y++NG  GRMN+  TFVVPVV DVS LRYSKLIR+YSTVVLLNATST LEL
Sbjct: 2057 CFDANFSKSYNENGNDGRMNTAPTFVVPVVLDVSALRYSKLIRVYSTVVLLNATSTSLEL 2116

Query: 1018 RFDIPFGVSPTVHE 1031
            RFDIPFGV+P + +
Sbjct: 2117 RFDIPFGVAPRIFD 2130