Miyakogusa Predicted Gene

Lj0g3v0264699.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264699.1 Non Characterized Hit- tr|I1L5T0|I1L5T0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,51.28,0.000000000000006,seg,NULL,CUFF.17470.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g004130.1 | SnRK1-interacting protein, putative | HC | chr...   124   3e-29
Medtr4g035350.1 | SnRK1-interacting protein | HC | chr4:12163687...    84   6e-17

>Medtr6g004130.1 | SnRK1-interacting protein, putative | HC |
           chr6:129762-132289 | 20130731
          Length = 211

 Score =  124 bits (312), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/163 (57%), Positives = 107/163 (65%), Gaps = 22/163 (13%)

Query: 11  AFS-SKIISLSSYDRT--KKGSLE---LGFVR--RDFGVKGRIGTLSLKCSLERXXXXXX 62
           AFS  K I L+S+ +T  K+ S+E   + F R  R  GV        +KCS+ER      
Sbjct: 2   AFSVCKTIPLTSFYKTSTKEVSIEPSSIWFTRKTRSIGV--------IKCSIERSNSSDG 53

Query: 63  XXXXXXXXXXXXYVVPLDNSFPFSNSS-CITRPLAEILRDLNKRIPDTIVKAHVPDDPSA 121
                       YVVPLD+SF FSNSS  ITRPLAEILRDLNKRIPDT+VK  +    SA
Sbjct: 54  KKGVVSNSN---YVVPLDDSFSFSNSSSTITRPLAEILRDLNKRIPDTLVKPPIDPSSSA 110

Query: 122 STFIP--WYHANRMLSFYAPGWCGEIRDVIFSDNGSVTVVYRL 162
           S+ I   WYHANRMLSFYAPGWCGEIRDVIFSDNG+VTVVYRL
Sbjct: 111 SSSIFIPWYHANRMLSFYAPGWCGEIRDVIFSDNGTVTVVYRL 153


>Medtr4g035350.1 | SnRK1-interacting protein | HC |
           chr4:12163687-12159845 | 20130731
          Length = 186

 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 37/76 (48%), Positives = 56/76 (73%), Gaps = 1/76 (1%)

Query: 88  SSCITRPLAEILRDLNKRIPDTIVKAHVPDDPSASTFIPWYHANRMLSFYAPGWCGEIRD 147
           +S I RPL+EIL++LNK++PD++VK  V  D     +IPW+  NR+L+ +AP W GE+R+
Sbjct: 56  TSGICRPLSEILKELNKKVPDSLVKTRVEKDGFHIRYIPWHTVNRVLNLHAPEWSGEVRN 115

Query: 148 VIFS-DNGSVTVVYRL 162
           + +S D  SV+VVYR+
Sbjct: 116 IAYSADAKSVSVVYRV 131