Miyakogusa Predicted Gene

Lj0g3v0264609.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264609.1 Non Characterized Hit- tr|I1NHW4|I1NHW4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2903
PE=,97.87,1e-17,CHAPERONIN-60KDA, CH60,NULL; CHAPERONIN,Chaperonin
Cpn60/TCP-1,NODE_15647_length_163_cov_172.061356.path1.1
         (47 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g090140.1 | TCP-1/cpn60 chaperonin family protein | HC | c...    92   8e-20
Medtr1g090130.1 | TCP-1/cpn60 chaperonin family protein | HC | c...    90   4e-19
Medtr8g017080.1 | TCP-1/cpn60 chaperonin family protein | HC | c...    76   7e-15
Medtr3g090510.1 | endomembrane-like protein | LC | chr3:41047335...    69   9e-13
Medtr7g060560.1 | endomembrane-like protein | LC | chr7:21891750...    65   2e-11
Medtr1g037030.1 | hypothetical protein | LC | chr1:13620540-1362...    51   3e-07

>Medtr1g090140.1 | TCP-1/cpn60 chaperonin family protein | HC |
           chr1:40381503-40376286 | 20130731
          Length = 574

 Score = 92.4 bits (228), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 45/47 (95%), Positives = 47/47 (100%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           MNAMDLRRGINMAVD+VVTNLKSRARMISTSEEIAQVGTISANG+RE
Sbjct: 142 MNAMDLRRGINMAVDAVVTNLKSRARMISTSEEIAQVGTISANGDRE 188


>Medtr1g090130.1 | TCP-1/cpn60 chaperonin family protein | HC |
           chr1:40370583-40364703 | 20130731
          Length = 576

 Score = 90.1 bits (222), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/47 (93%), Positives = 47/47 (100%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           MNAMDLRRGINMAVD+VVT+LKSRARMISTSEEIAQVGTISANG+RE
Sbjct: 142 MNAMDLRRGINMAVDAVVTSLKSRARMISTSEEIAQVGTISANGDRE 188


>Medtr8g017080.1 | TCP-1/cpn60 chaperonin family protein | HC |
           chr8:5738864-5745918 | 20130731
          Length = 576

 Score = 75.9 bits (185), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 37/47 (78%), Positives = 42/47 (89%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQVGTISANGERE 47
           +N MDLR GIN AVD+V+T+LKSRA MISTSEEI QVGTISANGER+
Sbjct: 143 VNVMDLRNGINKAVDAVITDLKSRAVMISTSEEITQVGTISANGERD 189


>Medtr3g090510.1 | endomembrane-like protein | LC |
           chr3:41047335-41051365 | 20130731
          Length = 394

 Score = 68.9 bits (167), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/36 (91%), Positives = 34/36 (94%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQ 36
           MNAMDLRRGINM VD+VVTNLKSRARMI TSEEIAQ
Sbjct: 125 MNAMDLRRGINMDVDAVVTNLKSRARMIDTSEEIAQ 160


>Medtr7g060560.1 | endomembrane-like protein | LC |
           chr7:21891750-21888765 | 20130731
          Length = 391

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 1   MNAMDLRRGINMAVDSVVTNLKSRARMISTSEEIAQ 36
           MNAMDLRRGINM  D+VVTNLKSRARMI TSEEIA+
Sbjct: 118 MNAMDLRRGINMDFDAVVTNLKSRARMIDTSEEIAK 153


>Medtr1g037030.1 | hypothetical protein | LC |
           chr1:13620540-13623254 | 20130731
          Length = 218

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 26/28 (92%)

Query: 10  INMAVDSVVTNLKSRARMISTSEEIAQV 37
           INM VD+VVTNLKSRARMI TSEEIAQV
Sbjct: 76  INMDVDAVVTNLKSRARMIDTSEEIAQV 103