Miyakogusa Predicted Gene

Lj0g3v0264299.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264299.1 tr|G7KDM7|G7KDM7_MEDTR GTP-binding protein ERG
OS=Medicago truncatula GN=MTR_5g020440 PE=3
SV=1,64.52,0,coiled-coil,NULL; P-loop containing nucleoside
triphosphate hydrolases,NULL; Prokaryotic type KH dom,CUFF.17430.1
         (385 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g020440.1 | GTP-binding ERG-like protein | HC | chr5:78093...   413   e-115
Medtr6g024095.1 | GTP-binding ERG-like protein | HC | chr6:85520...   411   e-115
Medtr1g033240.1 | GTP-binding protein Era protein | HC | chr1:11...   365   e-101
Medtr8g077125.1 | GTP-binding protein Era protein | HC | chr8:32...    70   2e-12

>Medtr5g020440.1 | GTP-binding ERG-like protein | HC |
           chr5:7809327-7803289 | 20130731
          Length = 421

 Score =  413 bits (1061), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 191/229 (83%), Positives = 211/229 (92%)

Query: 157 KSLSVGIIGAPNAGKSALTNFMVGTKVAAVSRKTNTTTHEVVGVMTKEDTQICFFDTPGL 216
           KSLSVGIIGAPNAGKS+LTN+MVGTKVAAVSRKTNTTTHEVVGV+TK DTQICFFDTPGL
Sbjct: 136 KSLSVGIIGAPNAGKSSLTNYMVGTKVAAVSRKTNTTTHEVVGVLTKGDTQICFFDTPGL 195

Query: 217 MLNCGGFPYRDVKARVESAWSSVNLYEVLIVIFDVHRHLTRPDSRVIKLVKRMGERSIPN 276
           +LNC GFPY+D KARVESAWSSVNLYEVLIVIFDVHRH+TRPDSRV+KL+KRMGERSIPN
Sbjct: 196 VLNCSGFPYKDAKARVESAWSSVNLYEVLIVIFDVHRHITRPDSRVVKLIKRMGERSIPN 255

Query: 277 QKRILCMNXXXXXXXXXXXXRVAEEFKDLPGYERHFMISGLKGSGVKDLTQYLMEQAVGR 336
           QKR+LCMN            +VAEEF++LPG+ER FMISG+KG+GVKDLTQ+LMEQAV R
Sbjct: 256 QKRVLCMNKIDLVEKKKDLTKVAEEFENLPGFERRFMISGMKGAGVKDLTQFLMEQAVER 315

Query: 337 PWDEDPFTMSEEVMKMIAKEVVRERLLDHVHQEIPYDIEHKLIDWKELR 385
           PW+EDPFTM+EEVMKMI+ EVVRERLLDHVHQEIPYDIEH+LIDWKELR
Sbjct: 316 PWEEDPFTMTEEVMKMISLEVVRERLLDHVHQEIPYDIEHRLIDWKELR 364



 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 12/93 (12%)

Query: 1  MKALRILRRTLHSXXXXXXXXXXXXXVFRAFFSAQPQHDEDPITVTATAPQPSEQDAVFD 60
          MK+LRI + TL+S             VFRAFFSA+P   E         PQP   DA FD
Sbjct: 1  MKSLRIFKNTLYSTPSPKITTT----VFRAFFSAEPLTPE-------PDPQPEHSDATFD 49

Query: 61 SSQYEIPIVHDQTQ-PKPTWEGKYRDRVNTVVF 92
          SS YEIPI+++  + PK +W  KYRDR + +VF
Sbjct: 50 SSHYEIPILNNNDEKPKVSWNKKYRDRTDKLVF 82


>Medtr6g024095.1 | GTP-binding ERG-like protein | HC |
           chr6:8552099-8557850 | 20130731
          Length = 417

 Score =  411 bits (1056), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 190/229 (82%), Positives = 210/229 (91%)

Query: 157 KSLSVGIIGAPNAGKSALTNFMVGTKVAAVSRKTNTTTHEVVGVMTKEDTQICFFDTPGL 216
           KSLSVGIIGAPNAGKS+LTN+MVGTKVAAVSRKTNTTTHEVVGV+TK DTQICFFDTPGL
Sbjct: 132 KSLSVGIIGAPNAGKSSLTNYMVGTKVAAVSRKTNTTTHEVVGVLTKGDTQICFFDTPGL 191

Query: 217 MLNCGGFPYRDVKARVESAWSSVNLYEVLIVIFDVHRHLTRPDSRVIKLVKRMGERSIPN 276
           +LNC GFPY+D KARVESAWSSVNLYEVLIVIFDVHRH+TRPDSRV+KL+KRMGERSIPN
Sbjct: 192 VLNCSGFPYKDAKARVESAWSSVNLYEVLIVIFDVHRHITRPDSRVVKLIKRMGERSIPN 251

Query: 277 QKRILCMNXXXXXXXXXXXXRVAEEFKDLPGYERHFMISGLKGSGVKDLTQYLMEQAVGR 336
           QKR+LCMN            +VAEEF++LPG+ER FMISG+KG+GVKDLTQ+LMEQAV R
Sbjct: 252 QKRVLCMNKIDLVEKKKDLTKVAEEFENLPGFERRFMISGMKGAGVKDLTQFLMEQAVER 311

Query: 337 PWDEDPFTMSEEVMKMIAKEVVRERLLDHVHQEIPYDIEHKLIDWKELR 385
           PW+EDPFTM+EEVMKMI+ EVVRE LLDHVHQEIPYDIEH+LIDWKELR
Sbjct: 312 PWEEDPFTMTEEVMKMISLEVVRESLLDHVHQEIPYDIEHRLIDWKELR 360



 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 52/93 (55%), Gaps = 16/93 (17%)

Query: 1  MKALRILRRTLHSXXXXXXXXXXXXXVFRAFFSAQPQHDEDPITVTATAPQPSEQDAVFD 60
          MK+LRI + TL+S             VFRAFFSA+P             P+P   DA FD
Sbjct: 1  MKSLRIFKNTLYSTPSPKITTT----VFRAFFSAEP-----------LTPEPEHSDATFD 45

Query: 61 SSQYEIPIVHDQTQ-PKPTWEGKYRDRVNTVVF 92
          SS YEIPI+++  + PK TW  KYRDR + +VF
Sbjct: 46 SSHYEIPILNNNDEKPKVTWNKKYRDRTDKLVF 78


>Medtr1g033240.1 | GTP-binding protein Era protein | HC |
           chr1:11942246-11935146 | 20130731
          Length = 391

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/207 (82%), Positives = 187/207 (90%)

Query: 179 VGTKVAAVSRKTNTTTHEVVGVMTKEDTQICFFDTPGLMLNCGGFPYRDVKARVESAWSS 238
           VGTKVAAVSRKTNTTTHEVVGV+TK DTQICFFDTPGL+LNC GFPY+D KARVESAWSS
Sbjct: 128 VGTKVAAVSRKTNTTTHEVVGVLTKGDTQICFFDTPGLVLNCSGFPYKDAKARVESAWSS 187

Query: 239 VNLYEVLIVIFDVHRHLTRPDSRVIKLVKRMGERSIPNQKRILCMNXXXXXXXXXXXXRV 298
           VNLYEVLIVIFDVHRH+TRPDSRV+KL+KRMGERSIPNQKR+LCMN            +V
Sbjct: 188 VNLYEVLIVIFDVHRHITRPDSRVVKLIKRMGERSIPNQKRVLCMNKIDLVEKKKDLTKV 247

Query: 299 AEEFKDLPGYERHFMISGLKGSGVKDLTQYLMEQAVGRPWDEDPFTMSEEVMKMIAKEVV 358
           AEEF++LPG+ER FMISG+KG+GVKDLTQ+LMEQAVGRPW+EDPFTM+EEVMKMI+ EVV
Sbjct: 248 AEEFENLPGFERRFMISGMKGNGVKDLTQFLMEQAVGRPWEEDPFTMTEEVMKMISLEVV 307

Query: 359 RERLLDHVHQEIPYDIEHKLIDWKELR 385
            ERLLDHVHQEIPYDIEH LI WKELR
Sbjct: 308 CERLLDHVHQEIPYDIEHSLIGWKELR 334



 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/93 (45%), Positives = 53/93 (56%), Gaps = 9/93 (9%)

Query: 1  MKALRILRRTLHSXXXXXXXXXXXXXVFRAFFSAQPQHDEDPITVTATAPQPSEQDAVFD 60
          MK+LRI + TL+S             VFRAFFSA+P   E         PQP   DA FD
Sbjct: 1  MKSLRIFKNTLYSTPSPKITTTVTT-VFRAFFSAEPLTPE-------PDPQPEHSDATFD 52

Query: 61 SSQYEIPIVHDQTQ-PKPTWEGKYRDRVNTVVF 92
          SS YE+PI+++  + PK TW  KYRDR + +VF
Sbjct: 53 SSHYELPILNNNDEKPKVTWNKKYRDRTDKLVF 85


>Medtr8g077125.1 | GTP-binding protein Era protein | HC |
           chr8:32768242-32763709 | 20130731
          Length = 473

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 20/232 (8%)

Query: 157 KSLSVGIIGAPNAGKSALTNFMVGTKVAAVSRKTNTTTHEVVGVMTKEDTQICFFDTPGL 216
           KS  V ++G PN GKS L N MVG K++ V+ K  TT H V+ + +  D Q+  +DTPG+
Sbjct: 117 KSGYVALLGKPNVGKSTLANQMVGQKLSIVTDKPQTTRHRVLCICSGSDYQMVLYDTPGV 176

Query: 217 MLNCGGFPYRDVKARVESAW------SSVNLYEVLIVIFDVHRHLTRPDSRVIKLVKRMG 270
           +        ++ + +++S        ++VN  + ++V+ D  +   + D  + + +   G
Sbjct: 177 L--------QEQRHKLDSMMMQNVRSATVNA-DCVLVLVDACKAPEKIDEVLEEAIG--G 225

Query: 271 ERSIPNQKRILCMNXXXXXXXXXXXXRVAEEFKDLPGYERHFMISGLKGSGVKDLTQYLM 330
            +  P    +L MN            ++ E +      +    +S   G GV+D+  +++
Sbjct: 226 HKEKP--PTLLIMNKKDLIKPGEVAKKL-EWYTKFTDVDEVIPVSAKYGHGVEDVKNWIL 282

Query: 331 EQAVGRPWDEDPFTMSEEVMKMIAKEVVRERLLDHVHQEIPYDIEHKLIDWK 382
            +    P       +SE   +    E+VRE++      EIPY  +  +I +K
Sbjct: 283 SKLPNGPAYFPKDIVSEHPERFFVAEIVREKIFLQYRNEIPYVCQVNVISYK 334