Miyakogusa Predicted Gene

Lj0g3v0264179.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0264179.1 tr|B9H866|B9H866_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_761186 PE=4
SV=1,57.84,9e-19,seg,NULL,gene.g20529.t1.1
         (118 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g063590.1 | MATE efflux family protein | HC | chr8:2656283...   129   4e-31
Medtr5g090290.1 | MATE efflux family protein | HC | chr5:3931518...   112   1e-25
Medtr5g087930.1 | MATE efflux family protein | HC | chr5:3813925...    69   7e-13
Medtr4g048000.1 | MATE efflux family protein | HC | chr4:1694770...    55   1e-08
Medtr2g088400.1 | MATE efflux family protein | HC | chr2:3726293...    47   6e-06
Medtr2g088400.2 | MATE efflux family protein | HC | chr2:3726293...    46   8e-06

>Medtr8g063590.1 | MATE efflux family protein | HC |
           chr8:26562836-26558291 | 20130731
          Length = 509

 Score =  129 bits (325), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 74/111 (66%), Positives = 81/111 (72%), Gaps = 6/111 (5%)

Query: 1   MALIEN-QPLIV----EENXXXXXXXXXXXXXTVEEMLGSEQISIRGWLKLIAWESRVLW 55
           MA  EN QPLI     EE               VEE+LG  +IS+ GWLKLIAWESR+LW
Sbjct: 1   MASTENYQPLITAVEDEEWSNPNVVMRDLSSERVEEILG-RRISVVGWLKLIAWESRLLW 59

Query: 56  YLSGASIIVSVFSFMFTFATLMFTGHLGSLPLAGASIACIGIQGLAFGIMV 106
           YLSGASI+VS F FMF+  TLMFTGHLGSLPLAGASIACIGIQGLAFGIM+
Sbjct: 60  YLSGASIVVSAFCFMFSTVTLMFTGHLGSLPLAGASIACIGIQGLAFGIMI 110


>Medtr5g090290.1 | MATE efflux family protein | HC |
           chr5:39315188-39318110 | 20130731
          Length = 573

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 56/103 (54%), Positives = 71/103 (68%)

Query: 4   IENQPLIVEENXXXXXXXXXXXXXTVEEMLGSEQISIRGWLKLIAWESRVLWYLSGASII 63
           +ENQP +V  +              +EE L    I +R WLKL+AWESR+LW LSGASI+
Sbjct: 1   MENQPFLVGLDSHSHTHIADLSSDAIEEFLEHRPIGLRWWLKLVAWESRLLWILSGASIV 60

Query: 64  VSVFSFMFTFATLMFTGHLGSLPLAGASIACIGIQGLAFGIMV 106
           V + +FM +F T+MF GHLGSL LAGASIA +GIQGLA+GIM+
Sbjct: 61  VYLCNFMLSFVTMMFCGHLGSLELAGASIASVGIQGLAYGIML 103


>Medtr5g087930.1 | MATE efflux family protein | HC |
           chr5:38139251-38135354 | 20130731
          Length = 465

 Score = 69.3 bits (168), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/79 (48%), Positives = 47/79 (59%), Gaps = 20/79 (25%)

Query: 28  TVEEMLGSEQISIRGWLKLIAWESRVLWYLSGASIIVSVFSFMFTFATLMFTGHLGSLPL 87
            VEE+L    + +R WLKL+AWES                     F T++F GHLGSL L
Sbjct: 25  DVEELLEHRPVELRWWLKLVAWES--------------------CFVTMIFCGHLGSLKL 64

Query: 88  AGASIACIGIQGLAFGIMV 106
           AGASIA +GIQGLA+GIM+
Sbjct: 65  AGASIATVGIQGLAYGIML 83


>Medtr4g048000.1 | MATE efflux family protein | HC |
           chr4:16947707-16929374 | 20130731
          Length = 519

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 1/79 (1%)

Query: 29  VEEMLGSEQISIRGWLKLIAW-ESRVLWYLSGASIIVSVFSFMFTFATLMFTGHLGSLPL 87
           +E +L    +     +KL  W E ++L+YL+  S+IV + +++ + +T +F+GHLG+L L
Sbjct: 43  LERILSDTSVPFVKRIKLATWVEFKLLFYLAAPSVIVYLINYVMSMSTQIFSGHLGNLEL 102

Query: 88  AGASIACIGIQGLAFGIMV 106
           A AS+   GIQ  A+G+M+
Sbjct: 103 AAASLGNNGIQIFAYGLML 121


>Medtr2g088400.1 | MATE efflux family protein | HC |
           chr2:37262932-37267773 | 20130731
          Length = 507

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 40/57 (70%)

Query: 50  ESRVLWYLSGASIIVSVFSFMFTFATLMFTGHLGSLPLAGASIACIGIQGLAFGIMV 106
           E R+L+ L+  ++ V + +++ + +T +F+GHLG+L LA AS+   GIQ  A+G+M+
Sbjct: 53  ELRLLFLLAAPAVFVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLML 109


>Medtr2g088400.2 | MATE efflux family protein | HC |
           chr2:37262932-37267773 | 20130731
          Length = 461

 Score = 45.8 bits (107), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 40/57 (70%)

Query: 50  ESRVLWYLSGASIIVSVFSFMFTFATLMFTGHLGSLPLAGASIACIGIQGLAFGIMV 106
           E R+L+ L+  ++ V + +++ + +T +F+GHLG+L LA AS+   GIQ  A+G+M+
Sbjct: 53  ELRLLFLLAAPAVFVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLML 109