Miyakogusa Predicted Gene

Lj0g3v0263769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0263769.1 Non Characterized Hit- tr|I1PH32|I1PH32_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,42.48,2e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,NODE_18621_length_317_cov_302.246063.path1.1
         (113 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g086250.2 | squamosa promoter-binding-like protein | HC | ...   221   1e-58
Medtr1g086250.1 | squamosa promoter-binding-like protein | HC | ...   220   2e-58
Medtr7g110320.1 | squamosa promoter-binding-like protein | HC | ...   190   2e-49
Medtr7g110320.2 | squamosa promoter-binding-like protein | HC | ...   190   2e-49
Medtr2g046550.3 | squamosa promoter-binding-like protein | HC | ...    90   5e-19
Medtr2g046550.2 | squamosa promoter-binding-like protein | HC | ...    90   5e-19
Medtr2g046550.4 | squamosa promoter-binding-like protein | HC | ...    90   5e-19
Medtr2g046550.1 | squamosa promoter-binding-like protein | HC | ...    90   6e-19

>Medtr1g086250.2 | squamosa promoter-binding-like protein | HC |
           chr1:38604301-38611936 | 20130731
          Length = 811

 Score =  221 bits (562), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 103/113 (91%), Positives = 107/113 (94%)

Query: 1   MAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALE 60
           MAFIFNGQVVIDTSLPFRSNNYSKI TVSPIA PASKR QFSVKGVN++RPATRLMCALE
Sbjct: 351 MAFIFNGQVVIDTSLPFRSNNYSKIWTVSPIAVPASKRAQFSVKGVNLMRPATRLMCALE 410

Query: 61  GKYLVCEDAHESMDQYSEELDGLHCIQFSCAVPVTNGRGFIEIEDQGLSSSFF 113
           GKYLVCEDAHES DQYSEELD L CIQFSC+VPV+NGRGFIEIEDQGLSSSFF
Sbjct: 411 GKYLVCEDAHESTDQYSEELDELQCIQFSCSVPVSNGRGFIEIEDQGLSSSFF 463


>Medtr1g086250.1 | squamosa promoter-binding-like protein | HC |
           chr1:38604282-38611936 | 20130731
          Length = 1003

 Score =  220 bits (561), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 103/113 (91%), Positives = 107/113 (94%)

Query: 1   MAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALE 60
           MAFIFNGQVVIDTSLPFRSNNYSKI TVSPIA PASKR QFSVKGVN++RPATRLMCALE
Sbjct: 543 MAFIFNGQVVIDTSLPFRSNNYSKIWTVSPIAVPASKRAQFSVKGVNLMRPATRLMCALE 602

Query: 61  GKYLVCEDAHESMDQYSEELDGLHCIQFSCAVPVTNGRGFIEIEDQGLSSSFF 113
           GKYLVCEDAHES DQYSEELD L CIQFSC+VPV+NGRGFIEIEDQGLSSSFF
Sbjct: 603 GKYLVCEDAHESTDQYSEELDELQCIQFSCSVPVSNGRGFIEIEDQGLSSSFF 655


>Medtr7g110320.1 | squamosa promoter-binding-like protein | HC |
           chr7:45220920-45210190 | 20130731
          Length = 1001

 Score =  190 bits (483), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/113 (77%), Positives = 97/113 (85%)

Query: 1   MAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALE 60
           MAFIFNGQ+VIDT LPFRSNNY KIL+VSPIA P+SK  QFSVKG+N+ RPATRL+CALE
Sbjct: 542 MAFIFNGQIVIDTPLPFRSNNYGKILSVSPIAIPSSKTAQFSVKGINLTRPATRLLCALE 601

Query: 61  GKYLVCEDAHESMDQYSEELDGLHCIQFSCAVPVTNGRGFIEIEDQGLSSSFF 113
           G YL CED  E MDQ S++LD L CIQFSC+VP  NGRGFIEIEDQGLSSSFF
Sbjct: 602 GNYLDCEDTDEPMDQCSKDLDELQCIQFSCSVPAMNGRGFIEIEDQGLSSSFF 654


>Medtr7g110320.2 | squamosa promoter-binding-like protein | HC |
           chr7:45220920-45211089 | 20130731
          Length = 860

 Score =  190 bits (483), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 88/113 (77%), Positives = 97/113 (85%)

Query: 1   MAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALE 60
           MAFIFNGQ+VIDT LPFRSNNY KIL+VSPIA P+SK  QFSVKG+N+ RPATRL+CALE
Sbjct: 542 MAFIFNGQIVIDTPLPFRSNNYGKILSVSPIAIPSSKTAQFSVKGINLTRPATRLLCALE 601

Query: 61  GKYLVCEDAHESMDQYSEELDGLHCIQFSCAVPVTNGRGFIEIEDQGLSSSFF 113
           G YL CED  E MDQ S++LD L CIQFSC+VP  NGRGFIEIEDQGLSSSFF
Sbjct: 602 GNYLDCEDTDEPMDQCSKDLDELQCIQFSCSVPAMNGRGFIEIEDQGLSSSFF 654


>Medtr2g046550.3 | squamosa promoter-binding-like protein | HC |
           chr2:20453791-20462574 | 20130731
          Length = 790

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 73/116 (62%), Gaps = 4/116 (3%)

Query: 1   MAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALE 60
           +A ++NGQ+V+D      S    +IL + P+A  A++ V+F+VKG+++   + RL+CALE
Sbjct: 323 VAILYNGQLVLDVPSRLGSPQNCQILCIKPLAVSANEDVKFTVKGLSLFLSSARLLCALE 382

Query: 61  GKYLVCEDAHESMDQYSEELDGLHCIQ---FSCAVPVTNGRGFIEIEDQGLSSSFF 113
           GKYLV +  ++ +D     + G H +Q   FSC +P   GRGFIE+ED  LSS  F
Sbjct: 383 GKYLVEDMCYDLIDGADAAI-GHHELQTLSFSCHIPNMTGRGFIEVEDNSLSSCSF 437


>Medtr2g046550.2 | squamosa promoter-binding-like protein | HC |
           chr2:20453791-20462497 | 20130731
          Length = 790

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 73/116 (62%), Gaps = 4/116 (3%)

Query: 1   MAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALE 60
           +A ++NGQ+V+D      S    +IL + P+A  A++ V+F+VKG+++   + RL+CALE
Sbjct: 323 VAILYNGQLVLDVPSRLGSPQNCQILCIKPLAVSANEDVKFTVKGLSLFLSSARLLCALE 382

Query: 61  GKYLVCEDAHESMDQYSEELDGLHCIQ---FSCAVPVTNGRGFIEIEDQGLSSSFF 113
           GKYLV +  ++ +D     + G H +Q   FSC +P   GRGFIE+ED  LSS  F
Sbjct: 383 GKYLVEDMCYDLIDGADAAI-GHHELQTLSFSCHIPNMTGRGFIEVEDNSLSSCSF 437


>Medtr2g046550.4 | squamosa promoter-binding-like protein | HC |
           chr2:20453789-20462574 | 20130731
          Length = 790

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 73/116 (62%), Gaps = 4/116 (3%)

Query: 1   MAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALE 60
           +A ++NGQ+V+D      S    +IL + P+A  A++ V+F+VKG+++   + RL+CALE
Sbjct: 323 VAILYNGQLVLDVPSRLGSPQNCQILCIKPLAVSANEDVKFTVKGLSLFLSSARLLCALE 382

Query: 61  GKYLVCEDAHESMDQYSEELDGLHCIQ---FSCAVPVTNGRGFIEIEDQGLSSSFF 113
           GKYLV +  ++ +D     + G H +Q   FSC +P   GRGFIE+ED  LSS  F
Sbjct: 383 GKYLVEDMCYDLIDGADAAI-GHHELQTLSFSCHIPNMTGRGFIEVEDNSLSSCSF 437


>Medtr2g046550.1 | squamosa promoter-binding-like protein | HC |
           chr2:20453789-20462574 | 20130731
          Length = 1025

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 73/116 (62%), Gaps = 4/116 (3%)

Query: 1   MAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAAPASKRVQFSVKGVNMIRPATRLMCALE 60
           +A ++NGQ+V+D      S    +IL + P+A  A++ V+F+VKG+++   + RL+CALE
Sbjct: 558 VAILYNGQLVLDVPSRLGSPQNCQILCIKPLAVSANEDVKFTVKGLSLFLSSARLLCALE 617

Query: 61  GKYLVCEDAHESMDQYSEELDGLHCIQ---FSCAVPVTNGRGFIEIEDQGLSSSFF 113
           GKYLV +  ++ +D     + G H +Q   FSC +P   GRGFIE+ED  LSS  F
Sbjct: 618 GKYLVEDMCYDLIDGADAAI-GHHELQTLSFSCHIPNMTGRGFIEVEDNSLSSCSF 672