Miyakogusa Predicted Gene

Lj0g3v0263429.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0263429.1 tr|G7JTD7|G7JTD7_MEDTR C2H2-type zinc finger
protein-like protein OS=Medicago truncatula
GN=MTR_4g02,55.1,0.000000000000001, ,CUFF.17366.1
         (99 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g021270.1 | transcriptional regulator superman protein | H...    87   3e-18

>Medtr4g021270.1 | transcriptional regulator superman protein | HC |
           chr4:6890129-6888889 | 20130731
          Length = 336

 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 71/98 (72%), Gaps = 7/98 (7%)

Query: 1   MDARCMNEVSNEDDIDVAMSLNLVVCRAQLTPVQFESIQEAEDRNCKKRKRIDASSSNDQ 60
           +DAR  ++  N+D+ DVAMSLNLV+CR     V+FES +E ED NCKKRK ID+SS  +Q
Sbjct: 215 IDARFRDKGGNDDESDVAMSLNLVLCRTHPL-VEFESTKE-EDFNCKKRK-IDSSS--NQ 269

Query: 61  FFQKSRSVDDRHVHHMQPKVFEFSPINIEELDLELRLG 98
            F  S + D +   +MQ K+FEF+P +IEE+DLELRLG
Sbjct: 270 LFSNSSTFDKQQ--NMQAKMFEFNPNSIEEVDLELRLG 305