Miyakogusa Predicted Gene

Lj0g3v0263419.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0263419.1 tr|Q1LYT2|Q1LYT2_ARATH At5g06070 OS=Arabidopsis
thaliana PE=2 SV=1,51.4,9e-19,zf-C2H2_6,NULL; seg,NULL; C2H2 and C2HC
zinc fingers,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ZIN,CUFF.17363.1
         (288 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g021270.1 | transcriptional regulator superman protein | H...   219   2e-57
Medtr5g080660.1 | transcriptional regulator superman protein | L...   115   5e-26
Medtr3g068095.1 | transcriptional regulator superman protein | H...   108   8e-24
Medtr5g014400.1 | palmate-like pentafoliata 1 transcription fact...    96   6e-20
Medtr2g076060.1 | C2H2 type zinc finger transcription factor fam...    87   1e-17
Medtr1g070265.1 | C2H2-type zinc finger protein | LC | chr1:3097...    79   4e-15
Medtr4g064873.1 | transcriptional regulator superman protein | H...    72   8e-13
Medtr7g063220.1 | C2H2 and C2HC zinc finger protein | HC | chr7:...    70   3e-12
Medtr1g075430.1 | transcriptional regulator superman protein | H...    65   6e-11
Medtr1g044225.1 | transcriptional regulator superman protein | H...    62   5e-10
Medtr1g070250.1 | transcriptional regulator superman protein | H...    59   4e-09
Medtr3g011990.1 | zinc finger-like protein | LC | chr3:3157305-3...    54   2e-07
Medtr7g026977.1 | zinc finger-like protein | LC | chr7:9012595-9...    53   3e-07
Medtr3g011970.1 | zinc finger-like protein | HC | chr3:3139591-3...    52   5e-07
Medtr8g466760.1 | zinc finger-like protein | LC | chr8:23851851-...    52   5e-07
Medtr5g008280.1 | zinc finger-like protein | LC | chr5:1724313-1...    51   1e-06
Medtr3g012010.1 | zinc finger-like protein, putative | HC | chr3...    50   2e-06
Medtr2g104900.1 | zinc finger-like protein | HC | chr2:45218425-...    49   5e-06
Medtr5g077370.1 | zinc finger-like protein | HC | chr5:33034672-...    49   6e-06
Medtr3g065020.1 | zinc finger-like protein | HC | chr3:29337344-...    49   6e-06
Medtr3g065020.2 | zinc finger-like protein | HC | chr3:29337031-...    49   6e-06
Medtr3g106230.1 | zinc finger-like protein | HC | chr3:49064784-...    49   8e-06

>Medtr4g021270.1 | transcriptional regulator superman protein | HC |
           chr4:6890129-6888889 | 20130731
          Length = 336

 Score =  219 bits (559), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/324 (46%), Positives = 183/324 (56%), Gaps = 56/324 (17%)

Query: 1   MEQGQCYWMHTKRKYXXXXXXXXXXXX---------XWEEQAFAEDAAGSLVGGCTWPPR 51
           MEQ QC W+ TKRKY                      WEEQAFAEDAA   +GGC WPPR
Sbjct: 1   MEQDQC-WIQTKRKYSMSNSNLASSLTNPSSSCYGDSWEEQAFAEDAAAGSLGGCIWPPR 59

Query: 52  SYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSPQNNEILFPH---------DLETH 102
           SYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ   PQN++IL+ +         ++ TH
Sbjct: 60  SYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ--QPQNDQILYHNHHHHHHHELEIATH 117

Query: 103 --QTPFSAPSLGNYLAPYPPPVYDLAYKTNPNP--DHNFLAXXXXXXXXXXXXXXXXXXX 158
             Q P       N L P  P    +  KTNPN   DH F++                   
Sbjct: 118 HVQNPLIQNVYNNNLFPNSPSCGLVYNKTNPNSHLDH-FVSSTSSPSSASKALFGDETL- 175

Query: 159 XXXXXHKISPLNSS--------GDRLYSQKFDI------EEVSKG-MDARCMNEVSNEDD 203
                  ISP NSS         D L S KF +      ++VSKG +DAR  ++  N+D+
Sbjct: 176 -------ISPFNSSESWLNLPGNDILCSTKFQLAVDNFDQKVSKGIIDARFRDKGGNDDE 228

Query: 204 IDVAMSLNLVVCRAQLTPVQFESIQEAEDRNCKKRKRIDASSSNDQFFQKSRSVDDRHVH 263
            DVAMSLNLV+CR     V+FES +E ED NCKKRK ID+SS  +Q F  S + D +   
Sbjct: 229 SDVAMSLNLVLCRTH-PLVEFESTKE-EDFNCKKRK-IDSSS--NQLFSNSSTFDKQ--Q 281

Query: 264 HMQPKVFEFSPINIEELDLELRLG 287
           +MQ K+FEF+P +IEE+DLELRLG
Sbjct: 282 NMQAKMFEFNPNSIEEVDLELRLG 305


>Medtr5g080660.1 | transcriptional regulator superman protein | LC |
           chr5:34522376-34523245 | 20130731
          Length = 234

 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 55/96 (57%), Positives = 64/96 (66%), Gaps = 6/96 (6%)

Query: 7   YWMHTKRKYXXXXXXXXXXXXXWEEQAFAEDAAGSLVGGCTWPPRSYSCSFCRREFRSAQ 66
           YW  TKR+              WEE+AFAEDAA +++ G  WPPR YSC+FC+REFRSAQ
Sbjct: 9   YWFWTKRR------QVQAPIESWEEKAFAEDAARNILNGSMWPPRFYSCNFCKREFRSAQ 62

Query: 67  ALGGHMNVHRKDRARLKQPSSPQNNEILFPHDLETH 102
           ALGGHMN+HR+DRARLKQ  SPQ N  L    L  H
Sbjct: 63  ALGGHMNIHRRDRARLKQNLSPQKNNDLINSSLGNH 98


>Medtr3g068095.1 | transcriptional regulator superman protein | HC |
           chr3:30727183-30725842 | 20130731
          Length = 260

 Score =  108 bits (269), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 56/69 (81%), Gaps = 1/69 (1%)

Query: 29  WEEQAFAEDAAGSLVGGCTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSP 88
           WEE+AFAEDAA  ++GGC WPPRSYSC FC+REFRSAQALGGHMNVHR+DRA+LKQ  + 
Sbjct: 34  WEEKAFAEDAA-RILGGCIWPPRSYSCHFCKREFRSAQALGGHMNVHRRDRAKLKQSLNH 92

Query: 89  QNNEILFPH 97
            N   L  H
Sbjct: 93  HNELELHSH 101


>Medtr5g014400.1 | palmate-like pentafoliata 1 transcription factor
           | HC | chr5:4830733-4831488 | 20130731
          Length = 251

 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 43/62 (69%), Positives = 48/62 (77%), Gaps = 2/62 (3%)

Query: 29  WEEQAFAEDAAGSLVGGCTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSP 88
           WE +AFAED     +   TWPPRSY+C+FCRREFRSAQALGGHMNVHR+DRARL Q   P
Sbjct: 60  WEVRAFAEDTRN--IMNTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHQTQPP 117

Query: 89  QN 90
            N
Sbjct: 118 LN 119


>Medtr2g076060.1 | C2H2 type zinc finger transcription factor
          family protein | HC | chr2:31844759-31844082 | 20130731
          Length = 225

 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 37/52 (71%), Positives = 45/52 (86%), Gaps = 1/52 (1%)

Query: 42 LVGGC-TWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSPQNNE 92
          ++ GC  WPPRSY+CSFCR+EF+SAQALGGHMNVHR+DRARL+Q S P  +E
Sbjct: 40 MMNGCYPWPPRSYTCSFCRKEFKSAQALGGHMNVHRRDRARLRQSSPPTTHE 91


>Medtr1g070265.1 | C2H2-type zinc finger protein | LC |
          chr1:30978693-30978130 | 20130731
          Length = 187

 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 32/39 (82%), Positives = 37/39 (94%)

Query: 45 GCTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLK 83
          G +WP R+YSCSFC+REFRSAQALGGHMNVHR+DRARL+
Sbjct: 29 GTSWPARNYSCSFCKREFRSAQALGGHMNVHRRDRARLR 67


>Medtr4g064873.1 | transcriptional regulator superman protein | HC |
           chr4:24223803-24223252 | 20130731
          Length = 173

 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 32/51 (62%), Positives = 40/51 (78%), Gaps = 1/51 (1%)

Query: 50  PRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSPQNNEILFPHDLE 100
           PRSY C+FC+R F +AQALGGHMN+HRKD+A+LKQ SS  N +   P +LE
Sbjct: 20  PRSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSST-NYQTQLPSNLE 69


>Medtr7g063220.1 | C2H2 and C2HC zinc finger protein | HC |
          chr7:23011049-23010633 | 20130731
          Length = 138

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 29/40 (72%), Positives = 36/40 (90%)

Query: 51 RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSPQN 90
          RSYSC+FC+R F +AQALGGHMN+HR+DRA+LKQ SS +N
Sbjct: 24 RSYSCTFCKRGFSNAQALGGHMNIHRRDRAKLKQQSSEEN 63


>Medtr1g075430.1 | transcriptional regulator superman protein | HC |
           chr1:33406305-33406881 | 20130731
          Length = 191

 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 7/70 (10%)

Query: 51  RSYSCSFCRREFRSAQALGGHMNVHRKDRARL-KQP--SSPQNNEILFPHDLETHQTPFS 107
           RSY C+FC+R F +AQALGGHMN+HRKDRA+  KQP  SS Q     + +D ET   PF+
Sbjct: 18  RSYECTFCKRGFTNAQALGGHMNIHRKDRAKASKQPNSSSSQIGTKFYTND-ETMVFPFA 76

Query: 108 APS---LGNY 114
           +     +GNY
Sbjct: 77  SEQNSFIGNY 86


>Medtr1g044225.1 | transcriptional regulator superman protein | HC |
           chr1:16708226-16707542 | 20130731
          Length = 165

 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 10/89 (11%)

Query: 46  CTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSPQNNEILFPHDLETHQTP 105
           C    RSY C+FC+R F +A+ALGGHMN+HRK+R   K      N+    P  + +  + 
Sbjct: 21  CIVTKRSYDCTFCKRGFTNARALGGHMNIHRKERTTYKAKQGTPNSSPFVPAVVSSQPST 80

Query: 106 FSAPSLGNYLAPYPPPVYDLAY---KTNP 131
           +       Y    PP  YD+ +   KTNP
Sbjct: 81  Y-------YCILEPPRNYDMYHQTSKTNP 102


>Medtr1g070250.1 | transcriptional regulator superman protein | HC
          | chr1:30957093-30955961 | 20130731
          Length = 191

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 6/54 (11%)

Query: 51 RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSS------PQNNEILFPHD 98
          RSY C FC+R F +AQALGGHMN+HRKDRA   + ++      P +++++  HD
Sbjct: 38 RSYECVFCKRGFTTAQALGGHMNIHRKDRANNNKSATKTNFAPPSSSKLVVDHD 91


>Medtr3g011990.1 | zinc finger-like protein | LC |
           chr3:3157305-3156415 | 20130731
          Length = 296

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 28/34 (82%)

Query: 51  RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
           RS+SCSFC+R+F ++QALGGH N H+ +RA  KQ
Sbjct: 98  RSFSCSFCKRQFSTSQALGGHQNAHKAERALEKQ 131


>Medtr7g026977.1 | zinc finger-like protein | LC |
           chr7:9012595-9011525 | 20130731
          Length = 356

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/34 (61%), Positives = 28/34 (82%)

Query: 51  RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
           RS+SC++C+ +F +AQALGGH N HRK+RA  KQ
Sbjct: 148 RSFSCTYCKAKFSTAQALGGHQNAHRKERAFEKQ 181


>Medtr3g011970.1 | zinc finger-like protein | HC |
           chr3:3139591-3138680 | 20130731
          Length = 303

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 28/38 (73%)

Query: 47  TWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
           T  P S+ CSFC+R+F ++QALGGH N H+ +RA  KQ
Sbjct: 94  TSDPVSFLCSFCKRQFSTSQALGGHQNAHKAERALEKQ 131


>Medtr8g466760.1 | zinc finger-like protein | LC |
           chr8:23851851-23852744 | 20130731
          Length = 297

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query: 51  RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
           RS+SCSFC+R+F ++QALGGH N H+ +R   KQ
Sbjct: 98  RSFSCSFCKRQFSTSQALGGHQNAHKAERTLEKQ 131


>Medtr5g008280.1 | zinc finger-like protein | LC |
          chr5:1724313-1725476 | 20130731
          Length = 387

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query: 51 RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
          RS+SC FC+R+F ++QALGGH N H+ +RA  KQ
Sbjct: 46 RSFSCLFCKRKFSTSQALGGHQNAHKAERALKKQ 79


>Medtr3g012010.1 | zinc finger-like protein, putative | HC |
           chr3:3166965-3167882 | 20130731
          Length = 305

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 27/34 (79%)

Query: 51  RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
           +S+SC FC+R+F ++QALGGH N H+ +RA  KQ
Sbjct: 98  KSFSCCFCKRKFSTSQALGGHQNAHKAERALEKQ 131


>Medtr2g104900.1 | zinc finger-like protein | HC |
           chr2:45218425-45217161 | 20130731
          Length = 247

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 29/40 (72%)

Query: 45  GCTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
           G    PR +SC++C+R+F S+QALGGH N H+++R   K+
Sbjct: 75  GNELEPRIFSCNYCQRKFYSSQALGGHQNAHKRERTMAKR 114


>Medtr5g077370.1 | zinc finger-like protein | HC |
           chr5:33034672-33031895 | 20130731
          Length = 237

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 28/35 (80%)

Query: 50  PRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
           PR +SC++C+R+F S+QALGGH N H+++R   K+
Sbjct: 86  PRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKR 120


>Medtr3g065020.1 | zinc finger-like protein | HC |
           chr3:29337344-29334747 | 20130731
          Length = 238

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 27/34 (79%)

Query: 51  RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
           R +SC++CRR+F S+QALGGH N H+++R   K+
Sbjct: 86  RVFSCNYCRRKFYSSQALGGHQNAHKRERTLAKR 119


>Medtr3g065020.2 | zinc finger-like protein | HC |
           chr3:29337031-29334766 | 20130731
          Length = 238

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 27/34 (79%)

Query: 51  RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
           R +SC++CRR+F S+QALGGH N H+++R   K+
Sbjct: 86  RVFSCNYCRRKFYSSQALGGHQNAHKRERTLAKR 119


>Medtr3g106230.1 | zinc finger-like protein | HC |
           chr3:49064784-49065723 | 20130731
          Length = 228

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 13/100 (13%)

Query: 47  TWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRA---RLKQPSSPQNNEILFPHDLETHQ 103
           T  PR ++C++C+R+F S+QALGGH N H+++R+   R ++          F H+   H+
Sbjct: 68  TSEPRFFTCNYCKRKFFSSQALGGHQNAHKRERSIAKRGRRTMFSATGTTSFLHNHLHHR 127

Query: 104 TPFSAPSL------GNYLAPYPPPVYDLAYKTNPNPDHNF 137
               A  L       N + P    V+ +  K    P HNF
Sbjct: 128 YANMASLLPLYGANSNSMRPLSIKVHSIVQK----PIHNF 163