Miyakogusa Predicted Gene

Lj0g3v0263049.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0263049.1 Non Characterized Hit- tr|I1KZ92|I1KZ92_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24762
PE,60.92,2e-19,seg,NULL,CUFF.17328.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g057760.1 | hypothetical protein | HC | chr7:20896572-2090...   159   5e-40
Medtr7g057760.2 | hypothetical protein | HC | chr7:20896580-2090...   111   1e-25

>Medtr7g057760.1 | hypothetical protein | HC |
           chr7:20896572-20900119 | 20130731
          Length = 107

 Score =  159 bits (403), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 80/101 (79%), Positives = 88/101 (87%), Gaps = 1/101 (0%)

Query: 1   MESTSSKVNV-PNSRQSSKRLLFDRRYGWVIDEWKGPAEEALDGGRGMFCIFPLAKALVQ 59
           MESTSS+VNV  +SRQSSKRLLFDRRYGWVIDEWK PAEEALDGGRGMFCI PLAK LVQ
Sbjct: 1   MESTSSRVNVVQSSRQSSKRLLFDRRYGWVIDEWKHPAEEALDGGRGMFCILPLAKNLVQ 60

Query: 60  MASQSINITAITARKAFENPQLSSHQMLQSALDGAVRNFSS 100
           MASQSIN+   +A KA ENPQ+ S QMLQ+ALD +VRNF+S
Sbjct: 61  MASQSINLGVSSAIKASENPQMFSLQMLQNALDDSVRNFAS 101


>Medtr7g057760.2 | hypothetical protein | HC |
           chr7:20896580-20900073 | 20130731
          Length = 88

 Score =  111 bits (278), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/80 (71%), Positives = 64/80 (80%), Gaps = 5/80 (6%)

Query: 21  LFDRRYGWVIDEWKGPAEEALDGGRGMFCIFPLAKALVQMASQSINITAITARKAFENPQ 80
           LF+R     IDEWK PAEEALDGGRGMFCI PLAK LVQMASQSIN+   +A KA ENPQ
Sbjct: 8   LFNR-----IDEWKHPAEEALDGGRGMFCILPLAKNLVQMASQSINLGVSSAIKASENPQ 62

Query: 81  LSSHQMLQSALDGAVRNFSS 100
           + S QMLQ+ALD +VRNF+S
Sbjct: 63  MFSLQMLQNALDDSVRNFAS 82