Miyakogusa Predicted Gene

Lj0g3v0263019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0263019.1 Non Characterized Hit- tr|I1KL09|I1KL09_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11428
PE,81.17,0,DUF1084,Domain of unknown function DUF1084; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.17330.1
         (230 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g033830.1 | tobamovirus multiplication-like protein | HC |...   310   9e-85
Medtr1g033830.2 | tobamovirus multiplication-like protein | HC |...   308   2e-84
Medtr4g094212.1 | tobamovirus multiplication-like protein | HC |...   197   6e-51
Medtr4g094212.2 | tobamovirus multiplication-like protein | HC |...   197   6e-51
Medtr2g022880.1 | tobamovirus multiplication-like protein | HC |...   177   7e-45
Medtr2g022880.2 | tobamovirus multiplication-like protein | HC |...   176   2e-44
Medtr4g131930.1 | tobamovirus multiplication-like protein | HC |...   165   3e-41
Medtr4g131930.2 | tobamovirus multiplication-like protein | HC |...    96   2e-20

>Medtr1g033830.1 | tobamovirus multiplication-like protein | HC |
           chr1:12230012-12237108 | 20130731
          Length = 297

 Score =  310 bits (793), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 155/204 (75%), Positives = 166/204 (81%)

Query: 11  VKLTDSYSWWRDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQLRVPEYGWTTQKVF 70
           ++LTDS +WW DI+DSP WQD IF+TLA LYGVVSA+ALIQLVRIQLRVPEYGWTTQKVF
Sbjct: 21  IELTDSSTWWNDIDDSPLWQDRIFYTLAGLYGVVSAIALIQLVRIQLRVPEYGWTTQKVF 80

Query: 71  HFLNCLVNGVRCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWAEIYYQAR 130
           HFLN +VN VRCLVFIFFRNVQRL PEI QHILLDVPSLAFFTTYALLVLFWAEIYYQAR
Sbjct: 81  HFLNFVVNAVRCLVFIFFRNVQRLQPEIAQHILLDVPSLAFFTTYALLVLFWAEIYYQAR 140

Query: 131 AVSSDGLKPSFYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXXXXXXXXX 190
           AVS+DGLKPSFY INVVVYA+Q         KPVS LVILSK+FFAG+S           
Sbjct: 141 AVSTDGLKPSFYIINVVVYAVQIILWLILWWKPVSVLVILSKVFFAGVSLFAALGFLLYG 200

Query: 191 XXXXXXXQRFPVESKGRRKKLQEV 214
                  QRFPVESKGRRKKLQEV
Sbjct: 201 GRLFLMLQRFPVESKGRRKKLQEV 224


>Medtr1g033830.2 | tobamovirus multiplication-like protein | HC |
           chr1:12230012-12236055 | 20130731
          Length = 224

 Score =  308 bits (790), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 154/203 (75%), Positives = 165/203 (81%)

Query: 11  VKLTDSYSWWRDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQLRVPEYGWTTQKVF 70
           ++LTDS +WW DI+DSP WQD IF+TLA LYGVVSA+ALIQLVRIQLRVPEYGWTTQKVF
Sbjct: 21  IELTDSSTWWNDIDDSPLWQDRIFYTLAGLYGVVSAIALIQLVRIQLRVPEYGWTTQKVF 80

Query: 71  HFLNCLVNGVRCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWAEIYYQAR 130
           HFLN +VN VRCLVFIFFRNVQRL PEI QHILLDVPSLAFFTTYALLVLFWAEIYYQAR
Sbjct: 81  HFLNFVVNAVRCLVFIFFRNVQRLQPEIAQHILLDVPSLAFFTTYALLVLFWAEIYYQAR 140

Query: 131 AVSSDGLKPSFYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXXXXXXXXX 190
           AVS+DGLKPSFY INVVVYA+Q         KPVS LVILSK+FFAG+S           
Sbjct: 141 AVSTDGLKPSFYIINVVVYAVQIILWLILWWKPVSVLVILSKVFFAGVSLFAALGFLLYG 200

Query: 191 XXXXXXXQRFPVESKGRRKKLQE 213
                  QRFPVESKGRRKKLQE
Sbjct: 201 GRLFLMLQRFPVESKGRRKKLQE 223


>Medtr4g094212.1 | tobamovirus multiplication-like protein | HC |
           chr4:37446139-37449467 | 20130731
          Length = 289

 Score =  197 bits (501), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 97/199 (48%), Positives = 131/199 (65%)

Query: 19  WWRDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQLRVPEYGWTTQKVFHFLNCLVN 78
           WW DI+DS  WQ  I++TL   Y  VS +ALIQLVRIQ+RVPEYGWTTQKVFH +N LVN
Sbjct: 21  WWNDIDDSDQWQRGIYYTLCAAYATVSFIALIQLVRIQMRVPEYGWTTQKVFHLMNFLVN 80

Query: 79  GVRCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWAEIYYQARAVSSDGLK 138
           GVR ++F  +++V  + P++ + +L++VP L FF+TY LLVLFWAEIY+QAR+  +  L+
Sbjct: 81  GVRAVLFGLYKSVFAIRPKVFEQVLMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAQKLR 140

Query: 139 PSFYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXXXXXXXXXXXXXXXXQ 198
           P++++IN VVY IQ             A +  +KLF A IS                  +
Sbjct: 141 PAYFSINGVVYLIQICIWIYMTASKTVAGIEAAKLFLAVISFCAALGFLLYGGRLFFLLR 200

Query: 199 RFPVESKGRRKKLQEVCSL 217
           RFP+ES+GR+KKL EV S+
Sbjct: 201 RFPIESRGRQKKLYEVGSV 219


>Medtr4g094212.2 | tobamovirus multiplication-like protein | HC |
           chr4:37446151-37449551 | 20130731
          Length = 289

 Score =  197 bits (501), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 97/199 (48%), Positives = 131/199 (65%)

Query: 19  WWRDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQLRVPEYGWTTQKVFHFLNCLVN 78
           WW DI+DS  WQ  I++TL   Y  VS +ALIQLVRIQ+RVPEYGWTTQKVFH +N LVN
Sbjct: 21  WWNDIDDSDQWQRGIYYTLCAAYATVSFIALIQLVRIQMRVPEYGWTTQKVFHLMNFLVN 80

Query: 79  GVRCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWAEIYYQARAVSSDGLK 138
           GVR ++F  +++V  + P++ + +L++VP L FF+TY LLVLFWAEIY+QAR+  +  L+
Sbjct: 81  GVRAVLFGLYKSVFAIRPKVFEQVLMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAQKLR 140

Query: 139 PSFYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXXXXXXXXXXXXXXXXQ 198
           P++++IN VVY IQ             A +  +KLF A IS                  +
Sbjct: 141 PAYFSINGVVYLIQICIWIYMTASKTVAGIEAAKLFLAVISFCAALGFLLYGGRLFFLLR 200

Query: 199 RFPVESKGRRKKLQEVCSL 217
           RFP+ES+GR+KKL EV S+
Sbjct: 201 RFPIESRGRQKKLYEVGSV 219


>Medtr2g022880.1 | tobamovirus multiplication-like protein | HC |
           chr2:7962710-7966725 | 20130731
          Length = 284

 Score =  177 bits (449), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 99/217 (45%), Positives = 133/217 (61%), Gaps = 15/217 (6%)

Query: 21  RDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQLRVPEYGWTTQKVFHFLNCLVNGV 80
           RD   SP     +F+TL   + ++S +ALIQL+RI+LRVPEYGWTTQK+FH  N +V+GV
Sbjct: 23  RDSTHSP-----LFYTLCASFSLISFIALIQLIRIELRVPEYGWTTQKIFHLFNFIVSGV 77

Query: 81  RCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWAEIYYQARAVSSDGLKPS 140
           R LVF F   V  LHP++L  +LLD+P L FF+TY LLVLFWAEIY+QAR++ +D L+  
Sbjct: 78  RALVFGFHAQVFFLHPKVLTLVLLDLPGLVFFSTYTLLVLFWAEIYHQARSLPTDKLRII 137

Query: 141 FYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXXXXXXXXXXXXXXXXQRF 200
           + ++N  VY IQ              +  + K+F AG+S                  +RF
Sbjct: 138 YISVNGAVYLIQVGFWIYLWLDYNDVVDFIGKIFIAGVSFVAAIGFLIFGGRLFFMLKRF 197

Query: 201 PVESKGRRKKLQEV---------CSLMRLSVVLLIQA 228
           P+ESKGRRKKLQEV         C L+R SV++L+ A
Sbjct: 198 PIESKGRRKKLQEVGFVTIICFTCFLIR-SVMVLVSA 233


>Medtr2g022880.2 | tobamovirus multiplication-like protein | HC |
           chr2:7962718-7966725 | 20130731
          Length = 252

 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 92/194 (47%), Positives = 122/194 (62%), Gaps = 5/194 (2%)

Query: 21  RDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQLRVPEYGWTTQKVFHFLNCLVNGV 80
           RD   SP     +F+TL   + ++S +ALIQL+RI+LRVPEYGWTTQK+FH  N +V+GV
Sbjct: 23  RDSTHSP-----LFYTLCASFSLISFIALIQLIRIELRVPEYGWTTQKIFHLFNFIVSGV 77

Query: 81  RCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWAEIYYQARAVSSDGLKPS 140
           R LVF F   V  LHP++L  +LLD+P L FF+TY LLVLFWAEIY+QAR++ +D L+  
Sbjct: 78  RALVFGFHAQVFFLHPKVLTLVLLDLPGLVFFSTYTLLVLFWAEIYHQARSLPTDKLRII 137

Query: 141 FYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXXXXXXXXXXXXXXXXQRF 200
           + ++N  VY IQ              +  + K+F AG+S                  +RF
Sbjct: 138 YISVNGAVYLIQVGFWIYLWLDYNDVVDFIGKIFIAGVSFVAAIGFLIFGGRLFFMLKRF 197

Query: 201 PVESKGRRKKLQEV 214
           P+ESKGRRKKLQEV
Sbjct: 198 PIESKGRRKKLQEV 211


>Medtr4g131930.1 | tobamovirus multiplication-like protein | HC |
           chr4:55083666-55089675 | 20130731
          Length = 278

 Score =  165 bits (418), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/197 (46%), Positives = 121/197 (61%)

Query: 21  RDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQLRVPEYGWTTQKVFHFLNCLVNGV 80
            DI  + +WQ +IF+ ++  Y VVS VAL QLVRIQLRVPEYGWTTQK+FH +N ++NGV
Sbjct: 12  EDIAATTSWQSSIFYFISSAYAVVSFVALFQLVRIQLRVPEYGWTTQKIFHLMNFILNGV 71

Query: 81  RCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWAEIYYQARAVSSDGLKPS 140
           R LVF     +   HP++   +LLD+P L FF+TY LLVLFWAEIY+QAR++ +D LK  
Sbjct: 72  RALVFGLHTLLFLFHPKVFVLVLLDLPGLLFFSTYTLLVLFWAEIYHQARSLPTDMLKII 131

Query: 141 FYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXXXXXXXXXXXXXXXXQRF 200
           + +IN  +Y IQ            S +    K+F  G+S                  + F
Sbjct: 132 YISINAALYIIQICIWIYLWTDDNSVVEFFGKIFIGGVSFVAALGFLLYGGRLFCMLRHF 191

Query: 201 PVESKGRRKKLQEVCSL 217
           P+ESKGRRKKL EV S+
Sbjct: 192 PIESKGRRKKLHEVGSI 208


>Medtr4g131930.2 | tobamovirus multiplication-like protein | HC |
           chr4:55083666-55089675 | 20130731
          Length = 215

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 81/145 (55%)

Query: 73  LNCLVNGVRCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWAEIYYQARAV 132
           +N ++NGVR LVF     +   HP++   +LLD+P L FF+TY LLVLFWAEIY+QAR++
Sbjct: 1   MNFILNGVRALVFGLHTLLFLFHPKVFVLVLLDLPGLLFFSTYTLLVLFWAEIYHQARSL 60

Query: 133 SSDGLKPSFYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXXXXXXXXXXX 192
            +D LK  + +IN  +Y IQ            S +    K+F  G+S             
Sbjct: 61  PTDMLKIIYISINAALYIIQICIWIYLWTDDNSVVEFFGKIFIGGVSFVAALGFLLYGGR 120

Query: 193 XXXXXQRFPVESKGRRKKLQEVCSL 217
                + FP+ESKGRRKKL EV S+
Sbjct: 121 LFCMLRHFPIESKGRRKKLHEVGSI 145