Miyakogusa Predicted Gene

Lj0g3v0262789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262789.1 Non Characterized Hit- tr|I1M761|I1M761_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=3,57.61,6e-19,
,CUFF.17305.1
         (95 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g089170.1 | heat shock transcription factor | HC | chr5:38...    85   1e-17
Medtr4g011850.1 | heat stress transcription factor B-4b, putativ...    62   8e-11
Medtr3g101870.1 | heat shock transcription factor | HC | chr3:46...    55   2e-08

>Medtr5g089170.1 | heat shock transcription factor | HC |
           chr5:38752543-38751004 | 20130731
          Length = 254

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/94 (53%), Positives = 61/94 (64%), Gaps = 19/94 (20%)

Query: 1   MLLSELSQMKNLYNDIIYFIQNHLKPTTPFDQRS--SSAFPRLVDLDMLPDSRTDVGLRN 58
           MLLSELS MKNLYNDIIYFIQNH+ P +PF+QRS  S+   +LV+LD      +   L N
Sbjct: 172 MLLSELSHMKNLYNDIIYFIQNHVSPASPFEQRSNNSATILKLVELD-----SSSPQLPN 226

Query: 59  MKSCIIKKSLISCNEESNSSVKLFGVPLIGKKKI 92
            K C            ++SSVKLFGVPL GKK++
Sbjct: 227 DKDC------------NSSSVKLFGVPLCGKKRV 248


>Medtr4g011850.1 | heat stress transcription factor B-4b, putative |
           HC | chr4:3020478-3021209 | 20130731
          Length = 139

 Score = 62.4 bits (150), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 43/92 (46%), Positives = 49/92 (53%), Gaps = 34/92 (36%)

Query: 1   MLLSELSQMKNLYNDIIYFIQNHLKPTTPFDQRSSSAFPRLVDLDMLPDSRTDVGLRNMK 60
           MLLSELS MKNLYNDIIYFIQNHL                 V+LD      +   L N K
Sbjct: 76  MLLSELSHMKNLYNDIIYFIQNHL-----------------VELD-----SSSPQLPNDK 113

Query: 61  SCIIKKSLISCNEESNSSVKLFGVPLIGKKKI 92
            C            ++SSVKLFGVPL GKK++
Sbjct: 114 DC------------NSSSVKLFGVPLCGKKRV 133


>Medtr3g101870.1 | heat shock transcription factor | HC |
           chr3:46927481-46925440 | 20130731
          Length = 373

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 1   MLLSELSQMKNLYNDIIYFIQNHLKPTTPFDQRSSS 36
           ML+SEL+ MK LYNDIIYF+QNH+KP  P +  SSS
Sbjct: 207 MLMSELAHMKKLYNDIIYFVQNHVKPVAPSNSYSSS 242