Miyakogusa Predicted Gene

Lj0g3v0262759.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262759.1 tr|D2W164|D2W164_NAEGR Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_75104 PE=4
SV=1,29.25,3e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
UAA,UAA transporter; seg,NULL,CUFF.17302.1
         (392 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0028s0090.1 | CRT (chloroquine-resistance transporter)-like...   466   e-131
Medtr5g089340.1 | CRT (chloroquine-resistance transporter)-like ...   449   e-126
Medtr0028s0090.2 | CRT (chloroquine-resistance transporter)-like...   391   e-109
Medtr5g089340.2 | CRT (chloroquine-resistance transporter)-like ...   385   e-107
Medtr3g099780.1 | CRT (chloroquine-resistance transporter)-like ...   310   1e-84
Medtr5g089340.3 | CRT (chloroquine-resistance transporter)-like ...   292   3e-79

>Medtr0028s0090.1 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | scaffold0028:25558-37867 |
           20130731
          Length = 432

 Score =  466 bits (1200), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 258/387 (66%), Positives = 281/387 (72%), Gaps = 11/387 (2%)

Query: 1   MTPLCRRLPTAGAASPFVHIRRQHTSPPAAICDIRRFHQTEQPGFAXXXXXXXXXXXXXA 60
           MT  CRR PTAG  S +  +R     P  +   I   +  ++ G +              
Sbjct: 1   MTSFCRRSPTAGTVSLYGQVRLLQ--PTNSTAGIHYGYSPQRQGISVLQLRRRTWIPV-V 57

Query: 61  EATGHGGAWERSVEGEEEENARPRVGELEPASGRGSVNRXXXXXXXXXXXXXMGVGNRVM 120
           EA+G   A ERS   EE+E  R     +   + R S N+              GVGNRV+
Sbjct: 58  EASG---ARERSDVSEEDEKKR-----IVEDNCRKSENQTVKVVVAAAAVGVFGVGNRVL 109

Query: 121 YKLALVPLKQYPFFLAQLATIGYVIVYFSILYIRYRTGIVTDEMLSVPKTPFLFVXXXXX 180
           YKLALVPLKQYPFFLAQ +T  YVIVYFSILYIRYR GIVTDEML+VPKTPFL V     
Sbjct: 110 YKLALVPLKQYPFFLAQFSTFVYVIVYFSILYIRYRAGIVTDEMLAVPKTPFLIVGLLEA 169

Query: 181 XXXXXXXXXXXXXXXXXIPILSQTFLVWQIFLSIVFLGRRYKVNQLLGCFLVTVGVIITV 240
                            IPILSQTFLVWQI LS +FLGRRYKVNQLLGCFLV +GVIITV
Sbjct: 170 LGAATGMAAGAMLSGASIPILSQTFLVWQILLSTIFLGRRYKVNQLLGCFLVAIGVIITV 229

Query: 241 ASGSGAGKSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDATRKLKGGSLDLFVVNSFG 300
           ASGSGAGKSL+EAGIFWSLLM+VSFLFQAADTVLKEVIF DAT+KLKGGSLDLFVVNSFG
Sbjct: 230 ASGSGAGKSLQEAGIFWSLLMMVSFLFQAADTVLKEVIFSDATQKLKGGSLDLFVVNSFG 289

Query: 301 SAFQALFICLLLPFLSRLWGIPFSQLPNYLKDGAACFLNVGTLSSGCDGAPLLPLLFIIV 360
           SAFQALFICLLLPFLS+LWGIPFSQLPNYLKDGAACFLN+G LSSGCDGAPLLPLLFIIV
Sbjct: 290 SAFQALFICLLLPFLSKLWGIPFSQLPNYLKDGAACFLNIGKLSSGCDGAPLLPLLFIIV 349

Query: 361 NMGFNISLLHLLKISSAVVSCLASTFA 387
           NMGFNISLLHLLKISSAVVSCLA+T A
Sbjct: 350 NMGFNISLLHLLKISSAVVSCLATTVA 376


>Medtr5g089340.1 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | chr5:38832701-38826925 |
           20130731
          Length = 437

 Score =  449 bits (1156), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 243/389 (62%), Positives = 276/389 (70%), Gaps = 11/389 (2%)

Query: 1   MTPLCRRLPTAGAASPFVHIRRQHTSPPAAICDIRRFHQTEQPGFAXXXXXXXXXXXXXA 60
           M   CRR P AGA      +  + +   A    IR        G++              
Sbjct: 1   MASFCRRCPDAGAIILPAGVTLRRSEMTAGDYGIRY-------GYSPRKTRLLRMKFTVV 53

Query: 61  EATGHGGAWERSVEGEEEENARPRVGEL--EPASGRGSVNRXXXXXXXXXXXXXMGVGNR 118
            A G GG+  R +E     N     G +  +  +GR S N+             MGVGNR
Sbjct: 54  VAAGDGGS-RRIMEKVGPCNYAVEDGSVGNDDVAGR-SGNKAAEVAVAAAATVVMGVGNR 111

Query: 119 VMYKLALVPLKQYPFFLAQLATIGYVIVYFSILYIRYRTGIVTDEMLSVPKTPFLFVXXX 178
           V+YKLALVPLKQYPFFLAQL+T GYVIVYF I+YIR+R GIVTDEMLS+PKTPF+ +   
Sbjct: 112 VLYKLALVPLKQYPFFLAQLSTFGYVIVYFGIMYIRHRAGIVTDEMLSLPKTPFVVIGLL 171

Query: 179 XXXXXXXXXXXXXXXXXXXIPILSQTFLVWQIFLSIVFLGRRYKVNQLLGCFLVTVGVII 238
                              IPILSQTFLVWQI LSI+FLGRRYKVN LLGCFLVT+GV++
Sbjct: 172 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYKVNHLLGCFLVTIGVVV 231

Query: 239 TVASGSGAGKSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDATRKLKGGSLDLFVVNS 298
           TVASG  AG SLK+ G+FWSLLMIVSFL QAADTVLKE+IFLDA +KLKGGS+DLFVVNS
Sbjct: 232 TVASGPDAGNSLKDGGLFWSLLMIVSFLLQAADTVLKELIFLDANKKLKGGSVDLFVVNS 291

Query: 299 FGSAFQALFICLLLPFLSRLWGIPFSQLPNYLKDGAACFLNVGTLSSGCDGAPLLPLLFI 358
           +GSAFQALFICLLLPFLS+LWG+PFSQLPNYLKDGAACFLNVGTLSSGCDGAPLLPLLFI
Sbjct: 292 YGSAFQALFICLLLPFLSKLWGVPFSQLPNYLKDGAACFLNVGTLSSGCDGAPLLPLLFI 351

Query: 359 IVNMGFNISLLHLLKISSAVVSCLASTFA 387
           IVN+GFNI+LLHLLKISSAVVSCLASTF+
Sbjct: 352 IVNIGFNIALLHLLKISSAVVSCLASTFS 380


>Medtr0028s0090.2 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | scaffold0028:25558-37826 |
           20130731
          Length = 345

 Score =  391 bits (1005), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 219/348 (62%), Positives = 242/348 (69%), Gaps = 11/348 (3%)

Query: 1   MTPLCRRLPTAGAASPFVHIRRQHTSPPAAICDIRRFHQTEQPGFAXXXXXXXXXXXXXA 60
           MT  CRR PTAG  S +  +R     P  +   I   +  ++ G +              
Sbjct: 1   MTSFCRRSPTAGTVSLYGQVRLLQ--PTNSTAGIHYGYSPQRQGISVLQLRRRTWIPV-V 57

Query: 61  EATGHGGAWERSVEGEEEENARPRVGELEPASGRGSVNRXXXXXXXXXXXXXMGVGNRVM 120
           EA+G   A ERS   EE+E  R     +   + R S N+              GVGNRV+
Sbjct: 58  EASG---ARERSDVSEEDEKKR-----IVEDNCRKSENQTVKVVVAAAAVGVFGVGNRVL 109

Query: 121 YKLALVPLKQYPFFLAQLATIGYVIVYFSILYIRYRTGIVTDEMLSVPKTPFLFVXXXXX 180
           YKLALVPLKQYPFFLAQ +T  YVIVYFSILYIRYR GIVTDEML+VPKTPFL V     
Sbjct: 110 YKLALVPLKQYPFFLAQFSTFVYVIVYFSILYIRYRAGIVTDEMLAVPKTPFLIVGLLEA 169

Query: 181 XXXXXXXXXXXXXXXXXIPILSQTFLVWQIFLSIVFLGRRYKVNQLLGCFLVTVGVIITV 240
                            IPILSQTFLVWQI LS +FLGRRYKVNQLLGCFLV +GVIITV
Sbjct: 170 LGAATGMAAGAMLSGASIPILSQTFLVWQILLSTIFLGRRYKVNQLLGCFLVAIGVIITV 229

Query: 241 ASGSGAGKSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDATRKLKGGSLDLFVVNSFG 300
           ASGSGAGKSL+EAGIFWSLLM+VSFLFQAADTVLKEVIF DAT+KLKGGSLDLFVVNSFG
Sbjct: 230 ASGSGAGKSLQEAGIFWSLLMMVSFLFQAADTVLKEVIFSDATQKLKGGSLDLFVVNSFG 289

Query: 301 SAFQALFICLLLPFLSRLWGIPFSQLPNYLKDGAACFLNVGTLSSGCD 348
           SAFQALFICLLLPFLS+LWGIPFSQLPNYLKDGAACFLN+G LSSG +
Sbjct: 290 SAFQALFICLLLPFLSKLWGIPFSQLPNYLKDGAACFLNIGKLSSGFE 337


>Medtr5g089340.2 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | chr5:38831970-38826925 |
           20130731
          Length = 324

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/245 (78%), Positives = 212/245 (86%)

Query: 143 YVIVYFSILYIRYRTGIVTDEMLSVPKTPFLFVXXXXXXXXXXXXXXXXXXXXXXIPILS 202
           YVIVYF I+YIR+R GIVTDEMLS+PKTPF+ +                      IPILS
Sbjct: 23  YVIVYFGIMYIRHRAGIVTDEMLSLPKTPFVVIGLLEALAAATGMAAGAILSGASIPILS 82

Query: 203 QTFLVWQIFLSIVFLGRRYKVNQLLGCFLVTVGVIITVASGSGAGKSLKEAGIFWSLLMI 262
           QTFLVWQI LSI+FLGRRYKVN LLGCFLVT+GV++TVASG  AG SLK+ G+FWSLLMI
Sbjct: 83  QTFLVWQILLSIIFLGRRYKVNHLLGCFLVTIGVVVTVASGPDAGNSLKDGGLFWSLLMI 142

Query: 263 VSFLFQAADTVLKEVIFLDATRKLKGGSLDLFVVNSFGSAFQALFICLLLPFLSRLWGIP 322
           VSFL QAADTVLKE+IFLDA +KLKGGS+DLFVVNS+GSAFQALFICLLLPFLS+LWG+P
Sbjct: 143 VSFLLQAADTVLKELIFLDANKKLKGGSVDLFVVNSYGSAFQALFICLLLPFLSKLWGVP 202

Query: 323 FSQLPNYLKDGAACFLNVGTLSSGCDGAPLLPLLFIIVNMGFNISLLHLLKISSAVVSCL 382
           FSQLPNYLKDGAACFLNVGTLSSGCDGAPLLPLLFIIVN+GFNI+LLHLLKISSAVVSCL
Sbjct: 203 FSQLPNYLKDGAACFLNVGTLSSGCDGAPLLPLLFIIVNIGFNIALLHLLKISSAVVSCL 262

Query: 383 ASTFA 387
           ASTF+
Sbjct: 263 ASTFS 267


>Medtr3g099780.1 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | chr3:45782380-45789933 |
           20130731
          Length = 422

 Score =  310 bits (795), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 153/270 (56%), Positives = 194/270 (71%)

Query: 113 MGVGNRVMYKLALVPLKQYPFFLAQLATIGYVIVYFSILYIRYRTGIVTDEMLSVPKTPF 172
           + V NRV+YKLALVP+  YPFFLAQL T GYV++YFSILYIRYR GIVT+EML++PK  F
Sbjct: 95  LAVANRVLYKLALVPMSNYPFFLAQLNTFGYVVIYFSILYIRYRLGIVTNEMLAIPKWRF 154

Query: 173 LFVXXXXXXXXXXXXXXXXXXXXXXIPILSQTFLVWQIFLSIVFLGRRYKVNQLLGCFLV 232
             +                      IPIL+QTFLVWQ+  S + L RRY +NQ++GC LV
Sbjct: 155 FVIGFLEALGLVSGMSAGAILPGPVIPILNQTFLVWQLMFSALILRRRYSINQIVGCLLV 214

Query: 233 TVGVIITVASGSGAGKSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDATRKLKGGSLD 292
             GV+I ++SGS AG+ L +    W  LMIVS  FQA  +++KE +FLD++ +LK  SLD
Sbjct: 215 AAGVVIAISSGSNAGQMLSKVDFVWPALMIVSCAFQAGASIIKEFVFLDSSTRLKQKSLD 274

Query: 293 LFVVNSFGSAFQALFICLLLPFLSRLWGIPFSQLPNYLKDGAACFLNVGTLSSGCDGAPL 352
           +FVVNSFGS FQALF+ L LP +S L GIPF QLP+YLK GA CFLN+G   +GC+GAPL
Sbjct: 275 IFVVNSFGSGFQALFVLLFLPLISNLKGIPFVQLPSYLKSGAGCFLNIGAGKTGCEGAPL 334

Query: 353 LPLLFIIVNMGFNISLLHLLKISSAVVSCL 382
           LPLL+++ N+ FNISLL++LK SSAVV+ L
Sbjct: 335 LPLLYVVTNLAFNISLLNVLKSSSAVVASL 364


>Medtr5g089340.3 | CRT (chloroquine-resistance transporter)-like
           transporter, putative | HC | chr5:38832701-38826925 |
           20130731
          Length = 336

 Score =  292 bits (748), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 166/311 (53%), Positives = 194/311 (62%), Gaps = 11/311 (3%)

Query: 1   MTPLCRRLPTAGAASPFVHIRRQHTSPPAAICDIRRFHQTEQPGFAXXXXXXXXXXXXXA 60
           M   CRR P AGA      +  + +   A    IR        G++              
Sbjct: 1   MASFCRRCPDAGAIILPAGVTLRRSEMTAGDYGIRY-------GYSPRKTRLLRMKFTVV 53

Query: 61  EATGHGGAWERSVEGEEEENARPRVGEL--EPASGRGSVNRXXXXXXXXXXXXXMGVGNR 118
            A G GG+  R +E     N     G +  +  +GR S N+             MGVGNR
Sbjct: 54  VAAGDGGS-RRIMEKVGPCNYAVEDGSVGNDDVAGR-SGNKAAEVAVAAAATVVMGVGNR 111

Query: 119 VMYKLALVPLKQYPFFLAQLATIGYVIVYFSILYIRYRTGIVTDEMLSVPKTPFLFVXXX 178
           V+YKLALVPLKQYPFFLAQL+T GYVIVYF I+YIR+R GIVTDEMLS+PKTPF+ +   
Sbjct: 112 VLYKLALVPLKQYPFFLAQLSTFGYVIVYFGIMYIRHRAGIVTDEMLSLPKTPFVVIGLL 171

Query: 179 XXXXXXXXXXXXXXXXXXXIPILSQTFLVWQIFLSIVFLGRRYKVNQLLGCFLVTVGVII 238
                              IPILSQTFLVWQI LSI+FLGRRYKVN LLGCFLVT+GV++
Sbjct: 172 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYKVNHLLGCFLVTIGVVV 231

Query: 239 TVASGSGAGKSLKEAGIFWSLLMIVSFLFQAADTVLKEVIFLDATRKLKGGSLDLFVVNS 298
           TVASG  AG SLK+ G+FWSLLMIVSFL QAADTVLKE+IFLDA +KLKGGS+DLFVVNS
Sbjct: 232 TVASGPDAGNSLKDGGLFWSLLMIVSFLLQAADTVLKELIFLDANKKLKGGSVDLFVVNS 291

Query: 299 FGSAFQALFIC 309
           +GSAFQ    C
Sbjct: 292 YGSAFQVYDQC 302