Miyakogusa Predicted Gene
- Lj0g3v0262609.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0262609.1 Non Characterized Hit- tr|C0PH02|C0PH02_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,31.47,3e-18,seg,NULL,CUFF.17290.1
(368 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g099070.1 | electron carrier/iron ion-binding protein, put... 425 e-119
Medtr4g099070.2 | electron carrier/iron ion-binding protein, put... 420 e-117
>Medtr4g099070.1 | electron carrier/iron ion-binding protein,
putative | HC | chr4:41023331-41015147 | 20130731
Length = 359
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 219/336 (65%), Positives = 253/336 (75%), Gaps = 6/336 (1%)
Query: 34 KSQRGHNKPKCKQCGNVARSRCPYECCKSCCARNQNPCHIHVLKANSTVPEKTPSSGAAP 93
KSQRG NKPKCKQCGNVARSRCPYE CKSCC++NQNPC IHVLKA ST+P+ TPSSGAAP
Sbjct: 29 KSQRGQNKPKCKQCGNVARSRCPYEQCKSCCSKNQNPCPIHVLKA-STIPDNTPSSGAAP 87
Query: 94 LDQQSLELPHSTNAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAEAINEWRFAKLK 153
LD++S E P S +AGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDA AINEWRF+KLK
Sbjct: 88 LDRKSFEPPPSISAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWRFSKLK 147
Query: 154 EYKERNIEVENEAFDRYMQNVDLLEEVLXXXXXXXXXXXXXXXXPASTENNETMIPWLKL 213
EYKERN++ ENEAFDRYMQNVDLLEEVL STEN+E MIP LKL
Sbjct: 148 EYKERNVDAENEAFDRYMQNVDLLEEVLSVKQSDEDVSSASEANQTSTENSEVMIPGLKL 207
Query: 214 QISSNSMRSNAVRTRVQQIVDEGLMKLQNSAVDGEI-NEPMDEADEVSKSGKGTERLSAL 272
Q+ SNS RS+ VR R+++ VD+GL KL+ AVDG+ NE +DE E S K TE+LSA+
Sbjct: 208 QLRSNSTRSDGVRIRIKKTVDDGLKKLK-CAVDGDSNNEEIDEVSESSNKRKRTEKLSAI 266
Query: 273 NDLMDKINKARTEEDLKLCLELKSQLFDXXXXXXXXXXXXXXXXXXXKAAEPARDETPAI 332
+DL+DKINKAR+EEDL+ CLE+K QLF+ A D PA
Sbjct: 267 SDLLDKINKARSEEDLQSCLEVKLQLFNSDEDSAMVQHTDNEMHQNQTA---EGDAVPAK 323
Query: 333 GLNYSLPKMVVTNEIDQETLNIVDKHFCSLEDVEEL 368
L+YSLPK+V ++EIDQETLNI+DKHF SLE VE+L
Sbjct: 324 ELDYSLPKLVGSSEIDQETLNIIDKHFSSLEYVEQL 359
>Medtr4g099070.2 | electron carrier/iron ion-binding protein,
putative | HC | chr4:41023327-41015147 | 20130731
Length = 358
Score = 420 bits (1080), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/336 (65%), Positives = 252/336 (75%), Gaps = 7/336 (2%)
Query: 34 KSQRGHNKPKCKQCGNVARSRCPYECCKSCCARNQNPCHIHVLKANSTVPEKTPSSGAAP 93
KSQRG NKPKCKQCGNVARSRCPYE CKSCC++NQNPC IHVLKA ST+P+ TPSSGAAP
Sbjct: 29 KSQRGQNKPKCKQCGNVARSRCPYEQCKSCCSKNQNPCPIHVLKA-STIPDNTPSSGAAP 87
Query: 94 LDQQSLELPHSTNAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAEAINEWRFAKLK 153
LD++S E P S AGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDA AINEWRF+KLK
Sbjct: 88 LDRKSFEPPPSI-AGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWRFSKLK 146
Query: 154 EYKERNIEVENEAFDRYMQNVDLLEEVLXXXXXXXXXXXXXXXXPASTENNETMIPWLKL 213
EYKERN++ ENEAFDRYMQNVDLLEEVL STEN+E MIP LKL
Sbjct: 147 EYKERNVDAENEAFDRYMQNVDLLEEVLSVKQSDEDVSSASEANQTSTENSEVMIPGLKL 206
Query: 214 QISSNSMRSNAVRTRVQQIVDEGLMKLQNSAVDGEI-NEPMDEADEVSKSGKGTERLSAL 272
Q+ SNS RS+ VR R+++ VD+GL KL+ AVDG+ NE +DE E S K TE+LSA+
Sbjct: 207 QLRSNSTRSDGVRIRIKKTVDDGLKKLK-CAVDGDSNNEEIDEVSESSNKRKRTEKLSAI 265
Query: 273 NDLMDKINKARTEEDLKLCLELKSQLFDXXXXXXXXXXXXXXXXXXXKAAEPARDETPAI 332
+DL+DKINKAR+EEDL+ CLE+K QLF+ A D PA
Sbjct: 266 SDLLDKINKARSEEDLQSCLEVKLQLFNSDEDSAMVQHTDNEMHQNQTA---EGDAVPAK 322
Query: 333 GLNYSLPKMVVTNEIDQETLNIVDKHFCSLEDVEEL 368
L+YSLPK+V ++EIDQETLNI+DKHF SLE VE+L
Sbjct: 323 ELDYSLPKLVGSSEIDQETLNIIDKHFSSLEYVEQL 358