Miyakogusa Predicted Gene

Lj0g3v0262609.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262609.1 Non Characterized Hit- tr|C0PH02|C0PH02_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,31.47,3e-18,seg,NULL,CUFF.17290.1
         (368 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g099070.1 | electron carrier/iron ion-binding protein, put...   425   e-119
Medtr4g099070.2 | electron carrier/iron ion-binding protein, put...   420   e-117

>Medtr4g099070.1 | electron carrier/iron ion-binding protein,
           putative | HC | chr4:41023331-41015147 | 20130731
          Length = 359

 Score =  425 bits (1092), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 219/336 (65%), Positives = 253/336 (75%), Gaps = 6/336 (1%)

Query: 34  KSQRGHNKPKCKQCGNVARSRCPYECCKSCCARNQNPCHIHVLKANSTVPEKTPSSGAAP 93
           KSQRG NKPKCKQCGNVARSRCPYE CKSCC++NQNPC IHVLKA ST+P+ TPSSGAAP
Sbjct: 29  KSQRGQNKPKCKQCGNVARSRCPYEQCKSCCSKNQNPCPIHVLKA-STIPDNTPSSGAAP 87

Query: 94  LDQQSLELPHSTNAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAEAINEWRFAKLK 153
           LD++S E P S +AGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDA AINEWRF+KLK
Sbjct: 88  LDRKSFEPPPSISAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWRFSKLK 147

Query: 154 EYKERNIEVENEAFDRYMQNVDLLEEVLXXXXXXXXXXXXXXXXPASTENNETMIPWLKL 213
           EYKERN++ ENEAFDRYMQNVDLLEEVL                  STEN+E MIP LKL
Sbjct: 148 EYKERNVDAENEAFDRYMQNVDLLEEVLSVKQSDEDVSSASEANQTSTENSEVMIPGLKL 207

Query: 214 QISSNSMRSNAVRTRVQQIVDEGLMKLQNSAVDGEI-NEPMDEADEVSKSGKGTERLSAL 272
           Q+ SNS RS+ VR R+++ VD+GL KL+  AVDG+  NE +DE  E S   K TE+LSA+
Sbjct: 208 QLRSNSTRSDGVRIRIKKTVDDGLKKLK-CAVDGDSNNEEIDEVSESSNKRKRTEKLSAI 266

Query: 273 NDLMDKINKARTEEDLKLCLELKSQLFDXXXXXXXXXXXXXXXXXXXKAAEPARDETPAI 332
           +DL+DKINKAR+EEDL+ CLE+K QLF+                    A     D  PA 
Sbjct: 267 SDLLDKINKARSEEDLQSCLEVKLQLFNSDEDSAMVQHTDNEMHQNQTA---EGDAVPAK 323

Query: 333 GLNYSLPKMVVTNEIDQETLNIVDKHFCSLEDVEEL 368
            L+YSLPK+V ++EIDQETLNI+DKHF SLE VE+L
Sbjct: 324 ELDYSLPKLVGSSEIDQETLNIIDKHFSSLEYVEQL 359


>Medtr4g099070.2 | electron carrier/iron ion-binding protein,
           putative | HC | chr4:41023327-41015147 | 20130731
          Length = 358

 Score =  420 bits (1080), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/336 (65%), Positives = 252/336 (75%), Gaps = 7/336 (2%)

Query: 34  KSQRGHNKPKCKQCGNVARSRCPYECCKSCCARNQNPCHIHVLKANSTVPEKTPSSGAAP 93
           KSQRG NKPKCKQCGNVARSRCPYE CKSCC++NQNPC IHVLKA ST+P+ TPSSGAAP
Sbjct: 29  KSQRGQNKPKCKQCGNVARSRCPYEQCKSCCSKNQNPCPIHVLKA-STIPDNTPSSGAAP 87

Query: 94  LDQQSLELPHSTNAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAEAINEWRFAKLK 153
           LD++S E P S  AGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDA AINEWRF+KLK
Sbjct: 88  LDRKSFEPPPSI-AGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWRFSKLK 146

Query: 154 EYKERNIEVENEAFDRYMQNVDLLEEVLXXXXXXXXXXXXXXXXPASTENNETMIPWLKL 213
           EYKERN++ ENEAFDRYMQNVDLLEEVL                  STEN+E MIP LKL
Sbjct: 147 EYKERNVDAENEAFDRYMQNVDLLEEVLSVKQSDEDVSSASEANQTSTENSEVMIPGLKL 206

Query: 214 QISSNSMRSNAVRTRVQQIVDEGLMKLQNSAVDGEI-NEPMDEADEVSKSGKGTERLSAL 272
           Q+ SNS RS+ VR R+++ VD+GL KL+  AVDG+  NE +DE  E S   K TE+LSA+
Sbjct: 207 QLRSNSTRSDGVRIRIKKTVDDGLKKLK-CAVDGDSNNEEIDEVSESSNKRKRTEKLSAI 265

Query: 273 NDLMDKINKARTEEDLKLCLELKSQLFDXXXXXXXXXXXXXXXXXXXKAAEPARDETPAI 332
           +DL+DKINKAR+EEDL+ CLE+K QLF+                    A     D  PA 
Sbjct: 266 SDLLDKINKARSEEDLQSCLEVKLQLFNSDEDSAMVQHTDNEMHQNQTA---EGDAVPAK 322

Query: 333 GLNYSLPKMVVTNEIDQETLNIVDKHFCSLEDVEEL 368
            L+YSLPK+V ++EIDQETLNI+DKHF SLE VE+L
Sbjct: 323 ELDYSLPKLVGSSEIDQETLNIIDKHFSSLEYVEQL 358