Miyakogusa Predicted Gene

Lj0g3v0262599.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262599.2 Non Characterized Hit- tr|I1MVA1|I1MVA1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32333
PE,74.54,0,XendoU,Endoribonuclease XendoU; seg,NULL; EndoU-like,NULL;
SUBFAMILY NOT NAMED,NULL; PLACENTAL PROTE,CUFF.17292.2
         (431 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g099100.2 | poly(U)-specific endoribonuclease-B-like prote...   663   0.0  
Medtr4g099100.1 | poly(U)-specific endoribonuclease-B-like prote...   662   0.0  

>Medtr4g099100.2 | poly(U)-specific endoribonuclease-B-like protein
           | HC | chr4:41027757-41033026 | 20130731
          Length = 419

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/438 (75%), Positives = 357/438 (81%), Gaps = 26/438 (5%)

Query: 1   MEGLIKGLADVILGANXXXXXXXXXXXXXEERSRSSWAEVVXXXXXXXXXXXXXXXXXXX 60
           M+GLIKGL DV LG N             +ERSRSSW+EVV                   
Sbjct: 1   MDGLIKGLIDVALGGNNNHDQQDNDR---DERSRSSWSEVVSGDQEKDSDH--------- 48

Query: 61  XRFSNRPHREKEEEESWRDDS-----YSHKEKYRPQ--REECESESFNSPNRPPKLIEDN 113
                  H +KEE E+W+D+S       HKE+YRPQ  R+E ESE+FNSPNR  K  E N
Sbjct: 49  -------HPQKEEVETWQDNSNRHSPRPHKEQYRPQTQRQEYESETFNSPNRHNKSDEGN 101

Query: 114 NDGWQTVGKPSRQTHKVPKENWNSYKLPADEQQYSNEVEAGAGVEPSQSELGDLSRACEK 173
           NDGWQTVGKPS+QTHKVPK+NWNSYK PADEQQYSNEVE G+ VEPS+ EL DLSRACEK
Sbjct: 102 NDGWQTVGKPSKQTHKVPKDNWNSYKRPADEQQYSNEVEVGSRVEPSEDELADLSRACEK 161

Query: 174 LWDLDSNRLVPGKDYEIDCGEGKKAYQKQDMAQGSLFTWVSDDVFRKPTFARFLSLLDNY 233
           LWDLD NRL PGKDYEIDCGEGKK YQK DMAQGSLFTWVSDDVFRKPT+ARFLSLLDNY
Sbjct: 162 LWDLDLNRLTPGKDYEIDCGEGKKVYQKDDMAQGSLFTWVSDDVFRKPTYARFLSLLDNY 221

Query: 234 NPHQGSKEVVTSEERQEQASFIEEISRTAPIKYLHKFLVSKGIASGSYQDFKRMMTSLWF 293
           NPHQGSKEVVTSEE+QEQASFIEEISRTAPIKYLHKFL SK I SGS QDFKR++TSLWF
Sbjct: 222 NPHQGSKEVVTSEEKQEQASFIEEISRTAPIKYLHKFLASKRITSGSSQDFKRLLTSLWF 281

Query: 294 DLYGRGGTSGSSSAFEHVFVGEIKQQGEVSGFHNWLQFYLEEAKGRVDYQGYLFPRRRGE 353
           DLY R GTSGSSSAFEHVFVGEIKQ  EVSGFHNWLQFYLEE KG VDYQGY+FPRRRGE
Sbjct: 282 DLYSRCGTSGSSSAFEHVFVGEIKQTSEVSGFHNWLQFYLEETKGAVDYQGYIFPRRRGE 341

Query: 354 IPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYAGEEDNHIQLGPYEINV 413
           +PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCF+AG EDNHIQ+GPY +N+
Sbjct: 342 VPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFFAGTEDNHIQIGPYPVNI 401

Query: 414 KCYRLGERIGSVFPIAES 431
           KCYR G+RIGSVFPIA+S
Sbjct: 402 KCYRFGDRIGSVFPIADS 419


>Medtr4g099100.1 | poly(U)-specific endoribonuclease-B-like protein
           | HC | chr4:41027738-41033129 | 20130731
          Length = 442

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/445 (73%), Positives = 358/445 (80%), Gaps = 17/445 (3%)

Query: 1   MEGLIKGLADVILGANXXXXXXXXXXXXXEERSRSSWAEVVXXXXXXXXXXXXXXX---- 56
           M+GLIKGL DV LG N             +ERSRSSW+EVV                   
Sbjct: 1   MDGLIKGLIDVALGGNNNHDQQDNDR---DERSRSSWSEVVSGDQEKDSDHHPQKEEVET 57

Query: 57  -XXXXXRFSNRPHREKE---------EEESWRDDSYSHKEKYRPQREECESESFNSPNRP 106
                 R S RPH+E+          E E++   +  +KE+YRPQ++E ESE+FN+ NRP
Sbjct: 58  WQDNSNRHSPRPHKEQYRPQTQRQEYESETFNSPNRHNKEQYRPQQQEYESETFNTSNRP 117

Query: 107 PKLIEDNNDGWQTVGKPSRQTHKVPKENWNSYKLPADEQQYSNEVEAGAGVEPSQSELGD 166
            K  E NNDGWQTVGKPS+QTHKVPK+NWNSYK PADEQQYSNEVE G+ VEPS+ EL D
Sbjct: 118 NKSDEGNNDGWQTVGKPSKQTHKVPKDNWNSYKRPADEQQYSNEVEVGSRVEPSEDELAD 177

Query: 167 LSRACEKLWDLDSNRLVPGKDYEIDCGEGKKAYQKQDMAQGSLFTWVSDDVFRKPTFARF 226
           LSRACEKLWDLD NRL PGKDYEIDCGEGKK YQK DMAQGSLFTWVSDDVFRKPT+ARF
Sbjct: 178 LSRACEKLWDLDLNRLTPGKDYEIDCGEGKKVYQKDDMAQGSLFTWVSDDVFRKPTYARF 237

Query: 227 LSLLDNYNPHQGSKEVVTSEERQEQASFIEEISRTAPIKYLHKFLVSKGIASGSYQDFKR 286
           LSLLDNYNPHQGSKEVVTSEE+QEQASFIEEISRTAPIKYLHKFL SK I SGS QDFKR
Sbjct: 238 LSLLDNYNPHQGSKEVVTSEEKQEQASFIEEISRTAPIKYLHKFLASKRITSGSSQDFKR 297

Query: 287 MMTSLWFDLYGRGGTSGSSSAFEHVFVGEIKQQGEVSGFHNWLQFYLEEAKGRVDYQGYL 346
           ++TSLWFDLY R GTSGSSSAFEHVFVGEIKQ  EVSGFHNWLQFYLEE KG VDYQGY+
Sbjct: 298 LLTSLWFDLYSRCGTSGSSSAFEHVFVGEIKQTSEVSGFHNWLQFYLEETKGAVDYQGYI 357

Query: 347 FPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYAGEEDNHIQL 406
           FPRRRGE+PDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCF+AG EDNHIQ+
Sbjct: 358 FPRRRGEVPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFFAGTEDNHIQI 417

Query: 407 GPYEINVKCYRLGERIGSVFPIAES 431
           GPY +N+KCYR G+RIGSVFPIA+S
Sbjct: 418 GPYPVNIKCYRFGDRIGSVFPIADS 442