Miyakogusa Predicted Gene

Lj0g3v0262389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262389.1 Non Characterized Hit- tr|I1M4G6|I1M4G6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19871 PE,74.39,0,FAMILY
NOT NAMED,NULL; seg,NULL; DUF966,Protein of unknown function
DUF966,NODE_36384_length_2231_cov_33.016586.path2.1
         (244 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g084275.1 | auxin-regulated protein | HC | chr2:35459148-3...   331   4e-91
Medtr4g057330.1 | auxin-regulated protein | HC | chr4:20983812-2...   326   1e-89
Medtr4g063130.2 | auxin-regulated protein | HC | chr4:23360647-2...   171   7e-43
Medtr4g063130.1 | auxin-regulated protein | HC | chr4:23360644-2...   171   8e-43
Medtr8g091300.1 | DUF966 domain protein | HC | chr8:38095364-380...   135   2e-32
Medtr1g115370.1 | DUF966 domain protein | HC | chr1:52069779-520...   135   4e-32
Medtr4g057330.2 | auxin-regulated protein | HC | chr4:20983812-2...    95   7e-20
Medtr2g062310.1 | DUF966 domain protein | HC | chr2:26306172-263...    86   3e-17

>Medtr2g084275.1 | auxin-regulated protein | HC |
           chr2:35459148-35463284 | 20130731
          Length = 508

 Score =  331 bits (848), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 171/247 (69%), Positives = 191/247 (77%), Gaps = 4/247 (1%)

Query: 1   MEARVKKYRQ-LSPERAKVWTEKSPKYHQHRKVPVVYYLCRNRQLEHPHFMEVPLSSPHG 59
           MEARVKKYRQ LSPER+KVW EK PKY+++RKVPVVYYLCRNRQLEHPHFMEVP+SSP G
Sbjct: 1   MEARVKKYRQQLSPERSKVWKEKPPKYYKNRKVPVVYYLCRNRQLEHPHFMEVPISSPDG 60

Query: 60  LSLRDVIDKLDALRGRGMAAMYSWSCKRSYKNGFVWHDLSEDDIILPAHGNEYVLKGSEL 119
           L LRDVI KLDALRGRGMA +YSWSCKRSYKNG+VWHDLSEDD+ILPAHGNEYVLKGSEL
Sbjct: 61  LFLRDVIHKLDALRGRGMADLYSWSCKRSYKNGYVWHDLSEDDLILPAHGNEYVLKGSEL 120

Query: 120 FHESNSDGFSPSNNVKTQRLKKLPEPVXXXX-XXXXXXXXXXXXKETRNSDEDDPSPGKR 178
           F ESNSD FSP +NVK Q LK+LPEPV                 +E RNS ED+ SP + 
Sbjct: 121 FCESNSDRFSPISNVKLQSLKRLPEPVSCRSHDEVSSSSSSMNEREGRNSQEDEISPRQH 180

Query: 179 AGSSDVSPESRAGNRGSLSSQLTDDKIHKTDGFADASTQTEVNISWHEIQ--ETCSMGVS 236
            GSSD+SPES  G   S S  LT+ KI+KTD  ADASTQTE   + H+ Q  +TC+ GVS
Sbjct: 181 TGSSDISPESSDGKSDSQSLPLTEYKIYKTDRLADASTQTEECAAKHQSQTHKTCTRGVS 240

Query: 237 TEDVSLE 243
           TED S E
Sbjct: 241 TEDRSSE 247


>Medtr4g057330.1 | auxin-regulated protein | HC |
           chr4:20983812-20980996 | 20130731
          Length = 514

 Score =  326 bits (836), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 162/242 (66%), Positives = 187/242 (77%)

Query: 1   MEARVKKYRQLSPERAKVWTEKSPKYHQHRKVPVVYYLCRNRQLEHPHFMEVPLSSPHGL 60
           ME R+KKYRQ+SP+RAKVWTEK+PKY  + KVPV+YYLCRNRQLEHPHFMEVPLSSP GL
Sbjct: 1   MEGRMKKYRQVSPDRAKVWTEKAPKYQHNLKVPVIYYLCRNRQLEHPHFMEVPLSSPDGL 60

Query: 61  SLRDVIDKLDALRGRGMAAMYSWSCKRSYKNGFVWHDLSEDDIILPAHGNEYVLKGSELF 120
            LRDVIDKL+ALRGRGMA++YSWS KRSYKNGFVWHDL EDD+I PAHGNEYVLKGSELF
Sbjct: 61  YLRDVIDKLNALRGRGMASLYSWSSKRSYKNGFVWHDLCEDDLIQPAHGNEYVLKGSELF 120

Query: 121 HESNSDGFSPSNNVKTQRLKKLPEPVXXXXXXXXXXXXXXXXKETRNSDEDDPSPGKRAG 180
            ESNSD FSP N+VK Q +K LP P                 KETR S +D+ S  +  G
Sbjct: 121 DESNSDRFSPINDVKIQSVKMLPGPSSCRSHDEASSSSSMNGKETRYSQDDEQSHEQHTG 180

Query: 181 SSDVSPESRAGNRGSLSSQLTDDKIHKTDGFADASTQTEVNISWHEIQETCSMGVSTEDV 240
           SSDVSPESRA   G LS  LT+ KI+K DG ADASTQTE +I+  + +++C+ GVST+D 
Sbjct: 181 SSDVSPESRAEKTGPLSLALTEYKIYKADGLADASTQTEDSINRSKTRKSCTRGVSTDDG 240

Query: 241 SL 242
           SL
Sbjct: 241 SL 242


>Medtr4g063130.2 | auxin-regulated protein | HC |
           chr4:23360647-23365038 | 20130731
          Length = 421

 Score =  171 bits (432), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 80/118 (67%), Positives = 92/118 (77%), Gaps = 3/118 (2%)

Query: 9   RQLSPERAKVWTEKSPKYHQHRKVPVVYYLCRNRQLEHPHFMEVPLSSPHGLSLRDVIDK 68
           R+ SPER KVWTE  PK    RKV VVYYL RN  LEHPHFMEVPLSSPHGL L+DVI +
Sbjct: 14  RETSPERTKVWTEPKPK--TPRKVSVVYYLSRNGHLEHPHFMEVPLSSPHGLYLKDVIIR 71

Query: 69  LDALRGRGMAAMYSWSCKRSYKNGFVWHDLSEDDIILPAHGNEYVLKGSELF-HESNS 125
           L+ LRG+GM  MYSWS KRSYKNGFVWHDL+E D I P  G++Y+LKGSE+  HE+ +
Sbjct: 72  LNLLRGKGMPTMYSWSSKRSYKNGFVWHDLTESDFIYPTQGHDYILKGSEILEHETTA 129


>Medtr4g063130.1 | auxin-regulated protein | HC |
           chr4:23360644-23365038 | 20130731
          Length = 422

 Score =  171 bits (432), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 80/118 (67%), Positives = 92/118 (77%), Gaps = 3/118 (2%)

Query: 9   RQLSPERAKVWTEKSPKYHQHRKVPVVYYLCRNRQLEHPHFMEVPLSSPHGLSLRDVIDK 68
           R+ SPER KVWTE  PK    RKV VVYYL RN  LEHPHFMEVPLSSPHGL L+DVI +
Sbjct: 14  RETSPERTKVWTEPKPK--TPRKVSVVYYLSRNGHLEHPHFMEVPLSSPHGLYLKDVIIR 71

Query: 69  LDALRGRGMAAMYSWSCKRSYKNGFVWHDLSEDDIILPAHGNEYVLKGSELF-HESNS 125
           L+ LRG+GM  MYSWS KRSYKNGFVWHDL+E D I P  G++Y+LKGSE+  HE+ +
Sbjct: 72  LNLLRGKGMPTMYSWSSKRSYKNGFVWHDLTESDFIYPTQGHDYILKGSEILEHETTA 129


>Medtr8g091300.1 | DUF966 domain protein | HC |
           chr8:38095364-38096989 | 20130731
          Length = 409

 Score =  135 bits (341), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/137 (55%), Positives = 91/137 (66%), Gaps = 3/137 (2%)

Query: 9   RQLSPERAKVWTEKSPKYHQHRKVPVVYYLCRNRQLEHPHFMEVPLSSPHGLSLRDVIDK 68
           R+ SP+RAK+   K  K    RKV VVYYL RN  LEHPHFMEV LS    L L+DV D+
Sbjct: 10  RETSPDRAKICRMKQ-KVKPIRKVQVVYYLSRNGLLEHPHFMEVTLSPNQPLRLKDVFDR 68

Query: 69  LDALRGRGMAAMYSWSCKRSYKNGFVWHDLSEDDIILPAHGN-EYVLKGSELFHESNSDG 127
           L ALRG GM + YSWS KR+YK+G+VWHDL+  DII P+ G  EYVLKGSEL  E  S+ 
Sbjct: 69  LMALRGSGMPSQYSWSTKRNYKSGYVWHDLALKDIIHPSEGGAEYVLKGSELV-EGCSER 127

Query: 128 FSPSNNVKTQRLKKLPE 144
           F   N    Q +++ PE
Sbjct: 128 FQQLNLSDKQPIQQHPE 144


>Medtr1g115370.1 | DUF966 domain protein | HC |
           chr1:52069779-52068406 | 20130731
          Length = 254

 Score =  135 bits (339), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 62/96 (64%), Positives = 76/96 (79%), Gaps = 1/96 (1%)

Query: 31  KVPVVYYLCRNRQLEHPHFMEVPLSSPHG-LSLRDVIDKLDALRGRGMAAMYSWSCKRSY 89
           KVPV+YYL RN QLEHPH M V +SS HG L L+DVI++L  LRG+G+A MYSWS KRSY
Sbjct: 13  KVPVIYYLSRNGQLEHPHLMYVSISSSHGTLCLQDVINRLSFLRGQGIANMYSWSTKRSY 72

Query: 90  KNGFVWHDLSEDDIILPAHGNEYVLKGSELFHESNS 125
           +NGFVW DLSE+D+I P+  +EYVLKG+ L  E +S
Sbjct: 73  RNGFVWQDLSENDLIYPSSSHEYVLKGTLLIEEPSS 108


>Medtr4g057330.2 | auxin-regulated protein | HC |
           chr4:20983812-20980996 | 20130731
          Length = 409

 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/115 (48%), Positives = 71/115 (61%)

Query: 128 FSPSNNVKTQRLKKLPEPVXXXXXXXXXXXXXXXXKETRNSDEDDPSPGKRAGSSDVSPE 187
           FSP N+VK Q +K LP P                 KETR S +D+ S  +  GSSDVSPE
Sbjct: 23  FSPINDVKIQSVKMLPGPSSCRSHDEASSSSSMNGKETRYSQDDEQSHEQHTGSSDVSPE 82

Query: 188 SRAGNRGSLSSQLTDDKIHKTDGFADASTQTEVNISWHEIQETCSMGVSTEDVSL 242
           SRA   G LS  LT+ KI+K DG ADASTQTE +I+  + +++C+ GVST+D SL
Sbjct: 83  SRAEKTGPLSLALTEYKIYKADGLADASTQTEDSINRSKTRKSCTRGVSTDDGSL 137


>Medtr2g062310.1 | DUF966 domain protein | HC |
           chr2:26306172-26303022 | 20130731
          Length = 427

 Score = 86.3 bits (212), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/91 (42%), Positives = 59/91 (64%), Gaps = 1/91 (1%)

Query: 30  RKVPVVYYLCR-NRQLEHPHFMEVPLSSPHGLSLRDVIDKLDALRGRGMAAMYSWSCKRS 88
           R++ ++Y+L       EHPH + V   + +G+ LRD+   L  +RGR +   ++WS KR 
Sbjct: 9   RRLHIIYFLSHMGGHAEHPHLIRVLHLARNGVYLRDIKRWLGEVRGRDLPESFAWSYKRR 68

Query: 89  YKNGFVWHDLSEDDIILPAHGNEYVLKGSEL 119
           YK+G+VW DL +DD+I P   NEYVLKGS++
Sbjct: 69  YKSGYVWQDLMDDDLITPISDNEYVLKGSQI 99