Miyakogusa Predicted Gene

Lj0g3v0262339.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262339.1 Non Characterized Hit- tr|D7TUW0|D7TUW0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.63,3e-17,coiled-coil,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.17272.1
         (531 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g498775.1 | ripening-regulated protein | HC | chr3:4514507...   511   e-145
Medtr3g498775.2 | ripening-regulated protein | HC | chr3:4514507...   509   e-144
Medtr7g114220.1 | ripening-regulated protein | HC | chr7:4711704...   334   1e-91
Medtr1g117130.1 | transmembrane protein, putative | LC | chr1:52...   153   4e-37

>Medtr3g498775.1 | ripening-regulated protein | HC |
           chr3:45145070-45136608 | 20130731
          Length = 573

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 268/375 (71%), Positives = 308/375 (82%), Gaps = 3/375 (0%)

Query: 152 HNNKRFPFDTGLVQ--PKDSGDQRQASALRDEVDMLQEENESILDKLRLEEESCKEAEAR 209
           +  KRFP D  + Q   KD+GDQR+ASALRDE+DMLQEEN+++L+KLRL EE  +E E R
Sbjct: 181 NKEKRFPPDITIRQLNSKDTGDQREASALRDELDMLQEENDALLEKLRLAEEKRQEVETR 240

Query: 210 VRVLEKQVASLGEGVSLEAKLLSRKEAALRQREAALKNSRDCRDGVDTEITSLQAEVENA 269
            R LEKQVASLGEGVSLEAKLLSRKEAALRQREAAL  ++  R+  D ++T+L+ E++N 
Sbjct: 241 SRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALMAAKQTRNERDEDLTALRVEIQNL 300

Query: 270 KIETEAAVRQLNGAESEVKALRSMTQRMILTQKEMEEVVLKRCWLARYWGLAAKYGICAD 329
           K +  AA  Q   AE+E KALRSMTQRMILTQ+EMEEVVLKRCWLARYWGL+ K+GICAD
Sbjct: 301 KDDAAAAEEQRQEAEAEAKALRSMTQRMILTQEEMEEVVLKRCWLARYWGLSVKHGICAD 360

Query: 330 VAVSKYELWSSLAPLPFEVVVSAGQKAEEECWEKGEDAMEKRSKLVPDLNDLIGEGNIES 389
           +A SKYE WSSLAPLPFE+V+SAGQKA+EE W K  D  + RS+ V D+NDL GEGNIES
Sbjct: 361 IAQSKYEHWSSLAPLPFELVISAGQKAKEESWNKSTDGSD-RSQTVRDINDLAGEGNIES 419

Query: 390 MLSVEMGLKELASLKVEDAIVQALAQQRRPNSARQLVSDIKSPGDPKFMEAFELSPEESE 449
           MLSVEMGL+ELASLKVEDA+V ALAQ RRPN  RQ V D KSPGD K+ EAFELS EE+E
Sbjct: 420 MLSVEMGLRELASLKVEDAVVLALAQHRRPNLIRQSVLDSKSPGDAKYSEAFELSEEEAE 479

Query: 450 DVLFKEAWLTYFWRRAKAHSIEEDIAKDRLHFWIGRSGHSPTSHDAVDVEQGLSELRKLG 509
           DVLFKEAWLTYFWRRA  H +EEDIA+DRL FWI RSG SPTSHDAVDVE+ L ELRKLG
Sbjct: 480 DVLFKEAWLTYFWRRALFHGVEEDIAEDRLRFWIARSGQSPTSHDAVDVERDLLELRKLG 539

Query: 510 IEHRLWEASRKEVDQ 524
           IE +LWEASRK +DQ
Sbjct: 540 IEQQLWEASRKGIDQ 554


>Medtr3g498775.2 | ripening-regulated protein | HC |
           chr3:45145070-45136605 | 20130731
          Length = 405

 Score =  509 bits (1312), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/375 (71%), Positives = 308/375 (82%), Gaps = 3/375 (0%)

Query: 152 HNNKRFPFDTGLVQ--PKDSGDQRQASALRDEVDMLQEENESILDKLRLEEESCKEAEAR 209
           +  KRFP D  + Q   KD+GDQR+ASALRDE+DMLQEEN+++L+KLRL EE  +E E R
Sbjct: 13  NKEKRFPPDITIRQLNSKDTGDQREASALRDELDMLQEENDALLEKLRLAEEKRQEVETR 72

Query: 210 VRVLEKQVASLGEGVSLEAKLLSRKEAALRQREAALKNSRDCRDGVDTEITSLQAEVENA 269
            R LEKQVASLGEGVSLEAKLLSRKEAALRQREAAL  ++  R+  D ++T+L+ E++N 
Sbjct: 73  SRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALMAAKQTRNERDEDLTALRVEIQNL 132

Query: 270 KIETEAAVRQLNGAESEVKALRSMTQRMILTQKEMEEVVLKRCWLARYWGLAAKYGICAD 329
           K +  AA  Q   AE+E KALRSMTQRMILTQ+EMEEVVLKRCWLARYWGL+ K+GICAD
Sbjct: 133 KDDAAAAEEQRQEAEAEAKALRSMTQRMILTQEEMEEVVLKRCWLARYWGLSVKHGICAD 192

Query: 330 VAVSKYELWSSLAPLPFEVVVSAGQKAEEECWEKGEDAMEKRSKLVPDLNDLIGEGNIES 389
           +A SKYE WSSLAPLPFE+V+SAGQKA+EE W K  D  + RS+ V D+NDL GEGNIES
Sbjct: 193 IAQSKYEHWSSLAPLPFELVISAGQKAKEESWNKSTDGSD-RSQTVRDINDLAGEGNIES 251

Query: 390 MLSVEMGLKELASLKVEDAIVQALAQQRRPNSARQLVSDIKSPGDPKFMEAFELSPEESE 449
           MLSVEMGL+ELASLKVEDA+V ALAQ RRPN  RQ V D KSPGD K+ EAFELS EE+E
Sbjct: 252 MLSVEMGLRELASLKVEDAVVLALAQHRRPNLIRQSVLDSKSPGDAKYSEAFELSEEEAE 311

Query: 450 DVLFKEAWLTYFWRRAKAHSIEEDIAKDRLHFWIGRSGHSPTSHDAVDVEQGLSELRKLG 509
           DVLFKEAWLTYFWRRA  H +EEDIA+DRL FWI RSG SPTSHDAVDVE+ L ELRKLG
Sbjct: 312 DVLFKEAWLTYFWRRALFHGVEEDIAEDRLRFWIARSGQSPTSHDAVDVERDLLELRKLG 371

Query: 510 IEHRLWEASRKEVDQ 524
           IE +LWEASRK +DQ
Sbjct: 372 IEQQLWEASRKGIDQ 386


>Medtr7g114220.1 | ripening-regulated protein | HC |
           chr7:47117049-47128270 | 20130731
          Length = 637

 Score =  334 bits (856), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 191/380 (50%), Positives = 263/380 (69%), Gaps = 35/380 (9%)

Query: 154 NKRFPFDTGLVQPKDSGD--QRQASALRDEVDMLQEENESILDKLRLEEESCKEAEARVR 211
           ++R   D G ++ +++ +  QR  + L DE+DMLQEEN+++ +KLR  +E C+EAE RVR
Sbjct: 273 DRRLSLDLGSMKVRENLNPQQRSTTELEDELDMLQEENDNLHEKLRHADERCEEAEMRVR 332

Query: 212 VLEKQVASLGEGVSLEAKLLSRKEAALRQREAAL----KNSRDCRDGVDTEITSLQAEVE 267
            LE+Q+A+LGEGV+L+A+L +RKE  L+QREAA+    KN    + G     TSLQ   E
Sbjct: 333 QLEQQIANLGEGVTLDARLSNRKE--LQQREAAMGIHSKNHGGFQGG-----TSLQTNAE 385

Query: 268 NAKIETEAAVRQLNGAESEVKALRSMTQRMILTQKEMEEVVLKRCWLARYWGLAAKYGIC 327
            A               S ++ L+ +TQRMILT +EMEEVVLKRCWLARYW L  ++GI 
Sbjct: 386 EAI--------------STLEKLQLITQRMILTSEEMEEVVLKRCWLARYWNLCVRHGIH 431

Query: 328 ADVAVSKYELWSSLAPL-PFEVVVSAGQKAEEECWEKGEDAMEKRSKLVPDLNDLIGEGN 386
            ++A +K + WS+ AP  P +VV++AG+KA+ E     ED   +R     DLN+L GEGN
Sbjct: 432 VEIAEAKSKYWSTFAPNNPVDVVLAAGEKAKVETNLDLEDIEYQR-----DLNELSGEGN 486

Query: 387 IESMLSVEMGLKELASLKVEDAIVQALAQQRRPNSARQLVSD-IKSPGDPKFMEAFELSP 445
           IE+ML VE GL+EL SLKVE+A+  ALAQ RRPN  +   SD +K P + +  +AF+LS 
Sbjct: 487 IENMLFVEQGLRELTSLKVEEALAIALAQHRRPNLLKAGFSDDLKLPVEGQ-CDAFQLSQ 545

Query: 446 EESEDVLFKEAWLTYFWRRAKAHSIEEDIAKDRLHFWIGRSGHSPTSHDAVDVEQGLSEL 505
           EE++DV+FK+AWLTY WRRAK H IE +IA +RL +WI  +  +PTS DAVDVE+GL+E+
Sbjct: 546 EEAQDVIFKQAWLTYIWRRAKRHEIEPEIADERLQYWIDHNSKTPTSQDAVDVERGLAEI 605

Query: 506 RKLGIEHRLWEASRKEVDQD 525
           RKLGIE +LW+ SRKE++Q+
Sbjct: 606 RKLGIETQLWDESRKELEQE 625


>Medtr1g117130.1 | transmembrane protein, putative | LC |
           chr1:52980452-52981375 | 20130731
          Length = 146

 Score =  153 bits (387), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 73/86 (84%), Positives = 78/86 (90%)

Query: 240 QREAALKNSRDCRDGVDTEITSLQAEVENAKIETEAAVRQLNGAESEVKALRSMTQRMIL 299
            ++A LK+SRD +DGVD EITSLQAEVENAK+ETEA VRQLNG ESEVK LRSMTQRMIL
Sbjct: 32  NKKATLKSSRDSKDGVDKEITSLQAEVENAKVETEATVRQLNGVESEVKTLRSMTQRMIL 91

Query: 300 TQKEMEEVVLKRCWLARYWGLAAKYG 325
           TQKEMEEVVLKRCWLARYWGLA KYG
Sbjct: 92  TQKEMEEVVLKRCWLARYWGLATKYG 117