Miyakogusa Predicted Gene

Lj0g3v0261969.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261969.1 tr|G7IW09|G7IW09_MEDTR Beclin 1 protein
OS=Medicago truncatula GN=MTR_3g018770 PE=4 SV=1,93.65,0,BECLIN
1-RELATED,NULL; BECLIN 1,Beclin family; coiled-coil,NULL; seg,NULL;
APG6,Beclin family,CUFF.17241.1
         (504 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g018770.1 | autophagy protein beclin 1 | HC | chr3:5165817...   942   0.0  

>Medtr3g018770.1 | autophagy protein beclin 1 | HC |
           chr3:5165817-5174556 | 20130731
          Length = 509

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/504 (89%), Positives = 464/504 (92%), Gaps = 1/504 (0%)

Query: 2   KKGRSRTLPADPNVPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSGMQGSSIHGANSVMS 61
           KKGR+R+LP DPNVPRWVCQNCRN LCIVGVDSYADK+FNDPSRSGMQGSSIHGA+SVMS
Sbjct: 6   KKGRNRSLPVDPNVPRWVCQNCRNPLCIVGVDSYADKYFNDPSRSGMQGSSIHGASSVMS 65

Query: 62  TTKMDNSYVVLPKQRPQAQGVPPRPRGDSSQTGKAMEESFVVVYKSESASDGGGTHSLAP 121
           TTKMDNSYVVLPKQRPQ QGVPPRPRGD+S  GK MEESFVVVYKSESASDGGG +SL+P
Sbjct: 66  TTKMDNSYVVLPKQRPQTQGVPPRPRGDTSHPGKTMEESFVVVYKSESASDGGGGNSLSP 125

Query: 122 GADPGGHLQPHTSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVEDVNR 181
           G D GGHL PH SGFNSTITVLTRAFEIATTQTQVEQPLCLDCMR+LSDKLDKEVEDVNR
Sbjct: 126 GVDHGGHLPPHNSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRVLSDKLDKEVEDVNR 185

Query: 182 DIEAYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNTEVNAELREL 241
           DIEAYEACLKRLEGEA+DVLSEADF                       QN EVNAEL+EL
Sbjct: 186 DIEAYEACLKRLEGEAKDVLSEADFLKEKLKIEEEERRLEAAIEETERQNAEVNAELKEL 245

Query: 242 ELKSTRFKELEER-YWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAF 300
           ELKSTRFKELEER YWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAF
Sbjct: 246 ELKSTRFKELEERRYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLNDAF 305

Query: 301 PISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPL 360
           PISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPL
Sbjct: 306 PISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKIIPL 365

Query: 361 GSYPRITDSSNSSYELFGPVNLFWSTRYDKAMTLFLACLKDFAEFAKSKDQENNIPPEKC 420
           GSYPRITD+SNS+YELFGPVNLFWSTRYDKAMTLFLACLKDFAEFAKSKDQENNIPPEKC
Sbjct: 366 GSYPRITDTSNSTYELFGPVNLFWSTRYDKAMTLFLACLKDFAEFAKSKDQENNIPPEKC 425

Query: 421 FKLPYKIDNDKVENNSITQSFNKQENWTKALKYTLCNLKWALYWFVGNTNFQPLSTMVSS 480
           FKLPYKIDNDKVEN SITQSFNKQENWTKALKYTLCNLKWALYWFVGNTNFQPLS MVSS
Sbjct: 426 FKLPYKIDNDKVENYSITQSFNKQENWTKALKYTLCNLKWALYWFVGNTNFQPLSAMVSS 485

Query: 481 HAEVPAVGSLHTKRGTETKSESRN 504
           HAEVPAVGSL+ KRGTE KSESRN
Sbjct: 486 HAEVPAVGSLYPKRGTEAKSESRN 509