Miyakogusa Predicted Gene

Lj0g3v0261909.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261909.1 Non Characterized Hit- tr|B9SDQ1|B9SDQ1_RICCO
Ubiquitin carboxyl-terminal hydrolase, putative
OS=Ric,56.43,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.17233.1
         (316 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g079840.2 | ubiquitin carboxyl-terminal hydrolase-like pro...   353   9e-98
Medtr3g079840.1 | ubiquitin carboxyl-terminal hydrolase-like pro...   353   9e-98
Medtr5g086700.1 | ubiquitin carboxyl-terminal hydrolase-like pro...   350   8e-97
Medtr1g041240.1 | ubiquitin carboxyl-terminal hydrolase-like pro...   347   6e-96
Medtr1g041240.3 | ubiquitin carboxyl-terminal hydrolase-like pro...   347   6e-96
Medtr1g041240.2 | ubiquitin carboxyl-terminal hydrolase-like pro...   347   7e-96
Medtr5g086700.2 | ubiquitin carboxyl-terminal hydrolase-like pro...   342   2e-94

>Medtr3g079840.2 | ubiquitin carboxyl-terminal hydrolase-like protein
            | HC | chr3:36048376-36064377 | 20130731
          Length = 1118

 Score =  353 bits (907), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 174/304 (57%), Positives = 237/304 (77%), Gaps = 6/304 (1%)

Query: 16   ELENGDILCFQRSAH-DSDTDCLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKA 74
            +LE+GDI+CFQ++   D++     P++PS+LE++HNRQVV FRSL+RP ++ F LE+S+ 
Sbjct: 766  QLEDGDIVCFQKAPLVDNEEQVRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFSLEMSRL 825

Query: 75   NGYDDIVKRLARHIGLDDPSKIRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVI 134
              YDD+V+R+A+ +GLDDPSKIRLT HNC+S+QP P PI++RGV +L DMLV+ NQTS I
Sbjct: 826  YTYDDVVERVAQQLGLDDPSKIRLTPHNCYSQQPKPQPIKHRGVDHLSDMLVHYNQTSDI 885

Query: 135  MYYEVLDIPLPQLQDLKCLRVAFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSP 194
            +YYEVLDIPLP+LQ LK L+VAF+++ K+EV+S+ IR+P  STV D++  LK K++LS P
Sbjct: 886  LYYEVLDIPLPELQGLKTLKVAFHHAIKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHP 945

Query: 195  DANLKLLQVLDHKIYKTYSYDEKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFR 252
            DA L+LL+V  HKIYK +  +EKI +I+  + TLR  EIP +EK++GP D LI V HF +
Sbjct: 946  DAELRLLEVFYHKIYKVFPSNEKIENINDQYWTLRAEEIPEEEKNIGPQDRLIHVYHFTK 1005

Query: 253  ETGPKNHNQMKIKRFGEPFMLVIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDP 312
            +T     NQM+I+ FG+PF LVIHEGE L+++KV+IQ KL VP ++F KWKFAFLSL  P
Sbjct: 1006 DTA---QNQMQIQNFGDPFFLVIHEGEALSEIKVRIQKKLQVPDEEFSKWKFAFLSLGRP 1062

Query: 313  NYLQ 316
             YLQ
Sbjct: 1063 EYLQ 1066


>Medtr3g079840.1 | ubiquitin carboxyl-terminal hydrolase-like protein
            | HC | chr3:36048639-36064377 | 20130731
          Length = 1119

 Score =  353 bits (907), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 174/304 (57%), Positives = 237/304 (77%), Gaps = 6/304 (1%)

Query: 16   ELENGDILCFQRSAH-DSDTDCLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKA 74
            +LE+GDI+CFQ++   D++     P++PS+LE++HNRQVV FRSL+RP ++ F LE+S+ 
Sbjct: 767  QLEDGDIVCFQKAPLVDNEEQVRYPDVPSYLEYVHNRQVVHFRSLDRPKEDDFSLEMSRL 826

Query: 75   NGYDDIVKRLARHIGLDDPSKIRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVI 134
              YDD+V+R+A+ +GLDDPSKIRLT HNC+S+QP P PI++RGV +L DMLV+ NQTS I
Sbjct: 827  YTYDDVVERVAQQLGLDDPSKIRLTPHNCYSQQPKPQPIKHRGVDHLSDMLVHYNQTSDI 886

Query: 135  MYYEVLDIPLPQLQDLKCLRVAFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSP 194
            +YYEVLDIPLP+LQ LK L+VAF+++ K+EV+S+ IR+P  STV D++  LK K++LS P
Sbjct: 887  LYYEVLDIPLPELQGLKTLKVAFHHAIKDEVVSHTIRLPKQSTVGDVLDDLKTKVELSHP 946

Query: 195  DANLKLLQVLDHKIYKTYSYDEKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFR 252
            DA L+LL+V  HKIYK +  +EKI +I+  + TLR  EIP +EK++GP D LI V HF +
Sbjct: 947  DAELRLLEVFYHKIYKVFPSNEKIENINDQYWTLRAEEIPEEEKNIGPQDRLIHVYHFTK 1006

Query: 253  ETGPKNHNQMKIKRFGEPFMLVIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDP 312
            +T     NQM+I+ FG+PF LVIHEGE L+++KV+IQ KL VP ++F KWKFAFLSL  P
Sbjct: 1007 DTA---QNQMQIQNFGDPFFLVIHEGEALSEIKVRIQKKLQVPDEEFSKWKFAFLSLGRP 1063

Query: 313  NYLQ 316
             YLQ
Sbjct: 1064 EYLQ 1067


>Medtr5g086700.1 | ubiquitin carboxyl-terminal hydrolase-like protein
            | HC | chr5:37479517-37457082 | 20130731
          Length = 1123

 Score =  350 bits (899), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 174/304 (57%), Positives = 236/304 (77%), Gaps = 6/304 (1%)

Query: 16   ELENGDILCFQRS-AHDSDTDCLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKA 74
            +LE+GDI+CFQ++ A D++     P++PS+LE++HNRQVV FRSL++P ++ F LE+S+ 
Sbjct: 771  QLEDGDIICFQKAPATDNEEHIRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRL 830

Query: 75   NGYDDIVKRLARHIGLDDPSKIRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVI 134
              YDD+V+R+A  +GLDDPSKIRLT HNC+S+QP P PI+YRGV++L DMLV+ NQTS I
Sbjct: 831  FTYDDVVERVAEQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDI 890

Query: 135  MYYEVLDIPLPQLQDLKCLRVAFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSP 194
            +YYEVLDIPLP+LQ LK L+VAF+++TK+EV+ + IR+P  STV D++  LK K++LS P
Sbjct: 891  LYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVLEDLKKKVELSRP 950

Query: 195  DANLKLLQVLDHKIYKTYSYDEKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFR 252
            DA L+LL+V  HKIYK +  +EKI +I+  + TLR  EIP +EK+LGP D LI V HF +
Sbjct: 951  DAELRLLEVFYHKIYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTK 1010

Query: 253  ETGPKNHNQMKIKRFGEPFMLVIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDP 312
            +T     NQM+I+ FGEPF LVIHE ETLA+++++IQ KL VP  +F KWKFAF SL  P
Sbjct: 1011 DT---TQNQMQIQNFGEPFFLVIHECETLAEIRLRIQKKLQVPDDEFGKWKFAFFSLGRP 1067

Query: 313  NYLQ 316
             YL+
Sbjct: 1068 EYLE 1071


>Medtr1g041240.1 | ubiquitin carboxyl-terminal hydrolase-like protein
            | HC | chr1:18377655-18355307 | 20130731
          Length = 1119

 Score =  347 bits (891), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 182/343 (53%), Positives = 245/343 (71%), Gaps = 34/343 (9%)

Query: 1    MVGFPFSCDEEIELYE-----------------------LENGDILCFQRS--AHDSDTD 35
            M GF    DEEI+L+E                       LE+GDI+CFQ+S  A D    
Sbjct: 732  MAGF--DPDEEIDLFEEIKFDPKIMCEHVDQKSTFRDNQLEDGDIICFQKSPPAGDGQQQ 789

Query: 36   CLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKANGYDDIVKRLARHIGLDDPSK 95
               P++PSF E++ NRQVV FR LE+P ++ F LELSK + YDD+V+R+++H+GL+DPSK
Sbjct: 790  YCYPDVPSFFEYVQNRQVVRFRFLEKPKEDEFSLELSKLHTYDDVVERVSQHLGLNDPSK 849

Query: 96   IRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVIMYYEVLDIPLPQLQDLKCLRV 155
            IRLTSHNC+S+QP P PI+YRGV +L +MLV+ NQ S I+YYEVLDIPLP+LQ+LK L++
Sbjct: 850  IRLTSHNCYSQQPKPQPIKYRGVDHLSEMLVHYNQASDILYYEVLDIPLPELQNLKTLKI 909

Query: 156  AFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSPDANLKLLQVLDHKIYKTYSYD 215
            AF++  K+EV+  +IR+  HSTV D+I+ LK+K+ LS PDA L+L++V +HKIYK +  +
Sbjct: 910  AFHHDAKDEVM--IIRLQKHSTVADVINDLKSKVDLSHPDAELRLVEVFNHKIYKIFHVN 967

Query: 216  EKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFRETGPKNHNQMKIKRFGEPFML 273
            EKI +I+ H+ TLR  EIP +EKSLGP D +I V HF ++T     NQM ++ FG+PF L
Sbjct: 968  EKIENINDHYWTLRAEEIPEEEKSLGPHDRMIHVYHFLKDTA---QNQMHVQNFGDPFFL 1024

Query: 274  VIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDPNYLQ 316
            VI EGETLA VK+++Q KL VP ++F KWKFAF+SL  P YLQ
Sbjct: 1025 VIREGETLADVKLRVQKKLQVPNEEFLKWKFAFVSLGRPEYLQ 1067


>Medtr1g041240.3 | ubiquitin carboxyl-terminal hydrolase-like protein
            | HC | chr1:18377688-18355186 | 20130731
          Length = 1117

 Score =  347 bits (891), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 182/343 (53%), Positives = 245/343 (71%), Gaps = 34/343 (9%)

Query: 1    MVGFPFSCDEEIELYE-----------------------LENGDILCFQRS--AHDSDTD 35
            M GF    DEEI+L+E                       LE+GDI+CFQ+S  A D    
Sbjct: 730  MAGF--DPDEEIDLFEEIKFDPKIMCEHVDQKSTFRDNQLEDGDIICFQKSPPAGDGQQQ 787

Query: 36   CLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKANGYDDIVKRLARHIGLDDPSK 95
               P++PSF E++ NRQVV FR LE+P ++ F LELSK + YDD+V+R+++H+GL+DPSK
Sbjct: 788  YCYPDVPSFFEYVQNRQVVRFRFLEKPKEDEFSLELSKLHTYDDVVERVSQHLGLNDPSK 847

Query: 96   IRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVIMYYEVLDIPLPQLQDLKCLRV 155
            IRLTSHNC+S+QP P PI+YRGV +L +MLV+ NQ S I+YYEVLDIPLP+LQ+LK L++
Sbjct: 848  IRLTSHNCYSQQPKPQPIKYRGVDHLSEMLVHYNQASDILYYEVLDIPLPELQNLKTLKI 907

Query: 156  AFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSPDANLKLLQVLDHKIYKTYSYD 215
            AF++  K+EV+  +IR+  HSTV D+I+ LK+K+ LS PDA L+L++V +HKIYK +  +
Sbjct: 908  AFHHDAKDEVM--IIRLQKHSTVADVINDLKSKVDLSHPDAELRLVEVFNHKIYKIFHVN 965

Query: 216  EKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFRETGPKNHNQMKIKRFGEPFML 273
            EKI +I+ H+ TLR  EIP +EKSLGP D +I V HF ++T     NQM ++ FG+PF L
Sbjct: 966  EKIENINDHYWTLRAEEIPEEEKSLGPHDRMIHVYHFLKDTA---QNQMHVQNFGDPFFL 1022

Query: 274  VIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDPNYLQ 316
            VI EGETLA VK+++Q KL VP ++F KWKFAF+SL  P YLQ
Sbjct: 1023 VIREGETLADVKLRVQKKLQVPNEEFLKWKFAFVSLGRPEYLQ 1065


>Medtr1g041240.2 | ubiquitin carboxyl-terminal hydrolase-like protein
            | HC | chr1:18377688-18355186 | 20130731
          Length = 1118

 Score =  347 bits (891), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 182/343 (53%), Positives = 245/343 (71%), Gaps = 34/343 (9%)

Query: 1    MVGFPFSCDEEIELYE-----------------------LENGDILCFQRS--AHDSDTD 35
            M GF    DEEI+L+E                       LE+GDI+CFQ+S  A D    
Sbjct: 731  MAGF--DPDEEIDLFEEIKFDPKIMCEHVDQKSTFRDNQLEDGDIICFQKSPPAGDGQQQ 788

Query: 36   CLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKANGYDDIVKRLARHIGLDDPSK 95
               P++PSF E++ NRQVV FR LE+P ++ F LELSK + YDD+V+R+++H+GL+DPSK
Sbjct: 789  YCYPDVPSFFEYVQNRQVVRFRFLEKPKEDEFSLELSKLHTYDDVVERVSQHLGLNDPSK 848

Query: 96   IRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVIMYYEVLDIPLPQLQDLKCLRV 155
            IRLTSHNC+S+QP P PI+YRGV +L +MLV+ NQ S I+YYEVLDIPLP+LQ+LK L++
Sbjct: 849  IRLTSHNCYSQQPKPQPIKYRGVDHLSEMLVHYNQASDILYYEVLDIPLPELQNLKTLKI 908

Query: 156  AFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSPDANLKLLQVLDHKIYKTYSYD 215
            AF++  K+EV+  +IR+  HSTV D+I+ LK+K+ LS PDA L+L++V +HKIYK +  +
Sbjct: 909  AFHHDAKDEVM--IIRLQKHSTVADVINDLKSKVDLSHPDAELRLVEVFNHKIYKIFHVN 966

Query: 216  EKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFRETGPKNHNQMKIKRFGEPFML 273
            EKI +I+ H+ TLR  EIP +EKSLGP D +I V HF ++T     NQM ++ FG+PF L
Sbjct: 967  EKIENINDHYWTLRAEEIPEEEKSLGPHDRMIHVYHFLKDTA---QNQMHVQNFGDPFFL 1023

Query: 274  VIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDPNYLQ 316
            VI EGETLA VK+++Q KL VP ++F KWKFAF+SL  P YLQ
Sbjct: 1024 VIREGETLADVKLRVQKKLQVPNEEFLKWKFAFVSLGRPEYLQ 1066


>Medtr5g086700.2 | ubiquitin carboxyl-terminal hydrolase-like protein
            | HC | chr5:37479368-37457121 | 20130731
          Length = 1120

 Score =  342 bits (878), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 173/304 (56%), Positives = 233/304 (76%), Gaps = 9/304 (2%)

Query: 16   ELENGDILCFQRS-AHDSDTDCLLPNIPSFLEHMHNRQVVCFRSLERPNDEGFYLELSKA 74
            +LE+GDI+CFQ++ A D++     P++PS+LE++HNRQVV FRSL++P ++ F LE+S+ 
Sbjct: 771  QLEDGDIICFQKAPATDNEEHIRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRL 830

Query: 75   NGYDDIVKRLARHIGLDDPSKIRLTSHNCFSRQPNPDPIRYRGVKNLLDMLVNCNQTSVI 134
              YDD+V+R+A  +GLDDPSKIRLT HNC+S+QP P PI+YRGV++L DMLV+ NQTS I
Sbjct: 831  FTYDDVVERVAEQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDI 890

Query: 135  MYYEVLDIPLPQLQDLKCLRVAFYYSTKNEVLSYLIRMPNHSTVMDMISQLKNKLQLSSP 194
            +YYEVLDIPLP+LQ LK L+VAF+++TK+EV+ + IR+P  STV D++  LK K++LS P
Sbjct: 891  LYYEVLDIPLPELQGLKTLKVAFHHATKDEVVIHTIRLPKQSTVGDVLEDLKKKVELSRP 950

Query: 195  DANLKLLQVLDHKIYKTYSYDEKIGDISSHH-TLRVVEIP-DEKSLGPSDILIPVSHFFR 252
            DA L+LL+V  HKIYK +  +EKI +I+  + TLR  EIP +EK+LGP D LI V HF +
Sbjct: 951  DAELRLLEVFYHKIYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTK 1010

Query: 253  ETGPKNHNQMKIKRFGEPFMLVIHEGETLAKVKVKIQSKLHVPAKDFDKWKFAFLSLDDP 312
            +T     NQM    FGEPF LVIHE ETLA+++++IQ KL VP  +F KWKFAF SL  P
Sbjct: 1011 DT---TQNQMN---FGEPFFLVIHECETLAEIRLRIQKKLQVPDDEFGKWKFAFFSLGRP 1064

Query: 313  NYLQ 316
             YL+
Sbjct: 1065 EYLE 1068