Miyakogusa Predicted Gene

Lj0g3v0261889.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261889.1 tr|G7LEE7|G7LEE7_MEDTR Ubiquitin
carboxyl-terminal hydrolase family protein OS=Medicago truncatula
G,39.68,6e-17,seg,NULL,CUFF.17229.1
         (127 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g107200.1 | MATH (meprin and TRAF-C-like) domain protein |...    90   6e-19
Medtr7g107160.1 | MATH domain protein | LC | chr7:43693556-43690...    89   1e-18
Medtr7g107170.1 | hypothetical protein | LC | chr7:43696455-4369...    85   1e-17
Medtr8g011730.1 | MATH domain protein | LC | chr8:3242928-324428...    75   1e-14
Medtr1g042160.2 | MATH domain protein | HC | chr1:15824709-15827...    67   4e-12
Medtr1g042160.1 | MATH domain protein | HC | chr1:15824760-15827...    67   4e-12
Medtr2g034780.1 | hypothetical protein | LC | chr2:13334670-1333...    49   9e-07

>Medtr7g107200.1 | MATH (meprin and TRAF-C-like) domain protein | LC
           | chr7:43710995-43709256 | 20130731
          Length = 378

 Score = 89.7 bits (221), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 3/125 (2%)

Query: 2   FKQWAFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEM 61
           F +WAFT LG+VL+FLK  K KDM   +C+             GF L WLEPHVQ A  M
Sbjct: 256 FTEWAFTALGRVLYFLKTRKAKDMNDQACKDLQILWEELEIF-GFDLAWLEPHVQFALRM 314

Query: 62  KSYFDKANKVRKLKDKVKAFYRETRCLRVKRKFFQLGLELARNNLAKEEEGYEERDLDTV 121
           KSY +K  ++  LK+  +    E   L+ K    ++ L +AR+ L   EEG+   DL+  
Sbjct: 315 KSYVEKDVQMEMLKENAEGIALEMERLKTKLATLEVDLNIARDLLM--EEGFNGIDLNVE 372

Query: 122 LGYGT 126
           LGYG 
Sbjct: 373 LGYGI 377


>Medtr7g107160.1 | MATH domain protein | LC | chr7:43693556-43690971
           | 20130731
          Length = 447

 Score = 89.0 bits (219), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/123 (42%), Positives = 64/123 (52%)

Query: 2   FKQWAFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEM 61
           F++WAFT LG+VL+FLK  K KDM   SC              GF L+WLE HVQ A  M
Sbjct: 322 FREWAFTALGRVLYFLKTRKGKDMNDLSCSMDLQIFWEELQPFGFDLSWLEYHVQSALGM 381

Query: 62  KSYFDKANKVRKLKDKVKAFYRETRCLRVKRKFFQLGLELARNNLAKEEEGYEERDLDTV 121
           KS+ +K  +V K KD V A   E   L  K     + L  A++ L    E  EE DLD  
Sbjct: 382 KSFLEKMKEVEKQKDNVVALEMEKERLMAKLATVNVNLYAAKDVLMLIAEDLEEIDLDAE 441

Query: 122 LGY 124
           LG+
Sbjct: 442 LGF 444


>Medtr7g107170.1 | hypothetical protein | LC |
           chr7:43696455-43695357 | 20130731
          Length = 269

 Score = 85.1 bits (209), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 3/125 (2%)

Query: 2   FKQWAFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEM 61
           F   AF  LG+V++FLK  K +DM   +C+              F + WL+PHVQ A  +
Sbjct: 145 FTDLAFAALGRVIYFLKTRKVRDMNDQACKDLQVLWEELEKFK-FDMAWLDPHVQSALGI 203

Query: 62  KSYFDKANKVRKLKDKVKAFYRETRCLRVKRKFFQLGLELARNNLAKEEEGYEERDLDTV 121
           KSY +KA +V KLKD V A   E+  L+ K    +  L++ RN L  + +G+EERDLD+ 
Sbjct: 204 KSYVEKAVEVEKLKDNVAAVELESGRLKAKLIAARANLDMERNLL--KTKGFEERDLDSE 261

Query: 122 LGYGT 126
           LG G+
Sbjct: 262 LGCGS 266



 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/66 (43%), Positives = 36/66 (54%)

Query: 45  GFGLTWLEPHVQHAFEMKSYFDKANKVRKLKDKVKAFYRETRCLRVKRKFFQLGLELARN 104
           GF L WL  HVQ A  MK Y +K N+V KLKD V A   E   L+ K    ++ L  AR+
Sbjct: 20  GFYLIWLGLHVQSALGMKCYLEKLNEVEKLKDNVVALELEMERLKSKMATVEINLNAARD 79

Query: 105 NLAKEE 110
            L  E+
Sbjct: 80  LLDAED 85


>Medtr8g011730.1 | MATH domain protein | LC | chr8:3242928-3244284 |
           20130731
          Length = 356

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 15/126 (11%)

Query: 2   FKQWAFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEM 61
           F +WAFT LG+VLHFL   + KDM   +C H            GF L+WL+P+ + A + 
Sbjct: 246 FTEWAFTALGRVLHFLNTKRVKDMNEEACNH-LQILWEELETVGFDLSWLKPYFESAIDK 304

Query: 62  KSYFDKANKVRKLKDKVKAFYRETRCLRVKRKFFQLGLELARNNLAKEEEGYEERDLDTV 121
           KSY  +   V +L+  ++A   +                 AR  L + E+ + ERDLD  
Sbjct: 305 KSYAQRYASVNRLRKTIEALESDH--------------AKAREELIEAEKEFVERDLDAK 350

Query: 122 LGYGTG 127
           LGYG  
Sbjct: 351 LGYGAA 356


>Medtr1g042160.2 | MATH domain protein | HC | chr1:15824709-15827639
           | 20130731
          Length = 309

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 3/118 (2%)

Query: 6   AFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEMKSYF 65
            F  LG+VL+FLK  K +DM   +C+              F +TWLE HV +A  +K Y 
Sbjct: 194 VFAALGKVLYFLKTRKARDMNEQACKDLQVLWEELAKFK-FDITWLESHVHYALGIKRYM 252

Query: 66  DKANKVRKLKDKVKAFYRETRCLRVKRKFFQLGLELARNNLAKEEEGYEERDLDTVLG 123
           +KA +  K+K+ +     E   L+VK    ++ L++ R+ L  + +G++E DLD+ LG
Sbjct: 253 EKALEAEKMKENMVVLELEMERLKVKSLAAEMNLDMERDLL--KSKGFKELDLDSELG 308


>Medtr1g042160.1 | MATH domain protein | HC | chr1:15824760-15827536
           | 20130731
          Length = 309

 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 3/118 (2%)

Query: 6   AFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEMKSYF 65
            F  LG+VL+FLK  K +DM   +C+              F +TWLE HV +A  +K Y 
Sbjct: 194 VFAALGKVLYFLKTRKARDMNEQACKDLQVLWEELAKFK-FDITWLESHVHYALGIKRYM 252

Query: 66  DKANKVRKLKDKVKAFYRETRCLRVKRKFFQLGLELARNNLAKEEEGYEERDLDTVLG 123
           +KA +  K+K+ +     E   L+VK    ++ L++ R+ L  + +G++E DLD+ LG
Sbjct: 253 EKALEAEKMKENMVVLELEMERLKVKSLAAEMNLDMERDLL--KSKGFKELDLDSELG 308


>Medtr2g034780.1 | hypothetical protein | LC |
           chr2:13334670-13335871 | 20130731
          Length = 274

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 6/95 (6%)

Query: 2   FKQWAFTTLGQVLHFLKPTKPKDMTGASCQHXXXXXXXXXXXXGFGLTWLEPHVQHAFEM 61
           + +WAFT LG+VL+FL+ TK  +M     +             GF L+WL P V+  F  
Sbjct: 151 YVEWAFTALGRVLYFLEITKVDEMNEEEFEW-LQLLWDEVQVFGFDLSWLAPQVEFLF-- 207

Query: 62  KSYFDKANKVRKLKDKVKAFYRETRCLRVKRKFFQ 96
            +Y +K +KV KL+++ K+   E R   +  + F+
Sbjct: 208 -NYVEKMSKVNKLEEEKKSL--EVRIQELSMELFE 239