Miyakogusa Predicted Gene

Lj0g3v0261749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261749.1 Non Characterized Hit- tr|K3Y6I6|K3Y6I6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009827,40.44,2e-19,AA_permease_2,NULL; AMINO ACID
PERMEASE-RELATED,NULL; AMINO ACID TRANSPORTER,Amino acid/polyamine
tr,gene.g20344.t1.1
         (145 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g109380.1 | amino-acid permease BAT1-like protein | HC | c...   167   3e-42
Medtr1g109390.1 | amino-acid permease BAT1-like protein | HC | c...   166   7e-42
Medtr3g096760.1 | amino acid permease | HC | chr3:44281053-44284...    88   2e-18
Medtr3g096760.2 | amino acid permease | HC | chr3:44281053-44284...    88   2e-18

>Medtr1g109380.1 | amino-acid permease BAT1-like protein | HC |
           chr1:49465003-49460060 | 20130731
          Length = 520

 Score =  167 bits (423), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 96/121 (79%)

Query: 1   MILIPSVATERASVKFVFTYFNTDNGDGINSRCYIFLLGLLMSQYTLTGYDASAHMTEET 60
           MI+IP VA ERAS KFVFT+FN+DNG+GINS+ YIFL+GLLMSQYTLTGYDASAHMTEET
Sbjct: 210 MIIIPCVAPERASAKFVFTHFNSDNGEGINSKPYIFLVGLLMSQYTLTGYDASAHMTEET 269

Query: 61  KDAERNGPKXXXXXXXXXXXXXWCYILGISFAVTDIPGLLSDDNEAGGYAIAVRYFIWHS 120
           +DA+ NGPK             W YILGI+FAVTDIP LL+++NEAGGYAIA  +++   
Sbjct: 270 RDADINGPKGIISAVGISVLAGWGYILGITFAVTDIPYLLNENNEAGGYAIAEIFYLAFK 329

Query: 121 R 121
           R
Sbjct: 330 R 330


>Medtr1g109390.1 | amino-acid permease BAT1-like protein | HC |
           chr1:49471955-49467596 | 20130731
          Length = 518

 Score =  166 bits (420), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 98/122 (80%), Gaps = 1/122 (0%)

Query: 1   MILIPSVATERASVKFVFTYFNTDNGDGINSRCYIFLLGLLMSQYTLTGYDASAHMTEET 60
           MILIPSVATERAS KFVFT+FN +NGDGINSR  +FLLGLLMSQYTL+GYDASAHMTEET
Sbjct: 208 MILIPSVATERASNKFVFTHFNAENGDGINSRPCMFLLGLLMSQYTLSGYDASAHMTEET 267

Query: 61  KDAERNGPKXXXXXXXXXXXXXWCYILGISFAVTDIPGLLSDDNEAGGYAIA-VRYFIWH 119
           K A+RNGPK             W YI+GI++AVTDIP LLS++N+AGGYAIA + Y ++ 
Sbjct: 268 KGADRNGPKGIISAVGISIIVGWGYIIGITYAVTDIPYLLSENNDAGGYAIAEIFYQVFK 327

Query: 120 SR 121
           +R
Sbjct: 328 TR 329


>Medtr3g096760.1 | amino acid permease | HC | chr3:44281053-44284896
           | 20130731
          Length = 528

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 4/136 (2%)

Query: 1   MILIPSVATERASVKFVFTYFN-TDNGDGINSRCYIFLLGLLMSQYTLTGYDASAHMTEE 59
           +IL+P VA  + S  +VFT F    +  G++S+ Y  +L  L+SQY+L GYDA+AH+TEE
Sbjct: 210 VILLPLVALTKQSATYVFTNFELASDTTGVSSKPYAVILSFLVSQYSLYGYDAAAHLTEE 269

Query: 60  TKDAERNGPKXXXXXXXXXXXXXWCYILGISFAVTDIPGLLSDDNEAGGYAIAVR--YFI 117
           TK A++NGP              W YIL ++F++ D   L   +NE  G  +  +  Y  
Sbjct: 270 TKGADKNGPIAILGSIGIISVFGWAYILALTFSIQDFGYLYDPNNETAGAFVPAQILYDA 329

Query: 118 WHSRV-DMAMELVVLF 132
           +H R  + A  +V+LF
Sbjct: 330 FHGRYHNSAGAIVLLF 345


>Medtr3g096760.2 | amino acid permease | HC | chr3:44281053-44284896
           | 20130731
          Length = 528

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/136 (37%), Positives = 77/136 (56%), Gaps = 4/136 (2%)

Query: 1   MILIPSVATERASVKFVFTYFN-TDNGDGINSRCYIFLLGLLMSQYTLTGYDASAHMTEE 59
           +IL+P VA  + S  +VFT F    +  G++S+ Y  +L  L+SQY+L GYDA+AH+TEE
Sbjct: 210 VILLPLVALTKQSATYVFTNFELASDTTGVSSKPYAVILSFLVSQYSLYGYDAAAHLTEE 269

Query: 60  TKDAERNGPKXXXXXXXXXXXXXWCYILGISFAVTDIPGLLSDDNEAGGYAIAVR--YFI 117
           TK A++NGP              W YIL ++F++ D   L   +NE  G  +  +  Y  
Sbjct: 270 TKGADKNGPIAILGSIGIISVFGWAYILALTFSIQDFGYLYDPNNETAGAFVPAQILYDA 329

Query: 118 WHSRV-DMAMELVVLF 132
           +H R  + A  +V+LF
Sbjct: 330 FHGRYHNSAGAIVLLF 345