Miyakogusa Predicted Gene

Lj0g3v0261509.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261509.1 Non Characterized Hit- tr|I3SGU5|I3SGU5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,65.75,1e-18,seg,NULL; Tocopherol_cycl,Tocopherol
cyclase,CUFF.17203.1
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g110160.1 | tocopherol cyclase | HC | chr3:51129466-511341...    97   4e-21

>Medtr3g110160.1 | tocopherol cyclase | HC | chr3:51129466-51134136
           | 20130731
          Length = 479

 Score = 97.1 bits (240), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/73 (65%), Positives = 51/73 (69%), Gaps = 1/73 (1%)

Query: 28  HRVSLKLXXXXXXXXXXXXRLHVAPIAYSPTPPNRDLRTPHSGYHFDGSARKFFEGWYFK 87
           H  S KL                 PI YSPTPPNR LRTPHSGYHFDG+ARKFFEGWYFK
Sbjct: 32  HNRSFKLIIAHNSHTEQQQSQSSKPI-YSPTPPNRQLRTPHSGYHFDGTARKFFEGWYFK 90

Query: 88  VSIPERRQSFCFI 100
           VSIPE+RQSFCF+
Sbjct: 91  VSIPEKRQSFCFM 103