Miyakogusa Predicted Gene

Lj0g3v0261399.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261399.1 tr|G7J5I7|G7J5I7_MEDTR Ribonuclease J OS=Medicago
truncatula GN=MTR_3g089020 PE=4
SV=1,82.71,0,Metallo-hydrolase/oxidoreductase,NULL; seg,NULL;
Metallo-beta-lactamase superfamily,Beta-lactamase-l,CUFF.17191.1
         (864 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g089020.1 | RNA-metabolising metallo-beta-lactamase | HC |...  1462   0.0  
Medtr4g103770.1 | RNA-metabolising metallo-beta-lactamase | HC |...  1151   0.0  
Medtr7g014365.1 | hypothetical protein | LC | chr7:4300616-43046...    61   4e-09

>Medtr3g089020.1 | RNA-metabolising metallo-beta-lactamase | HC |
           chr3:33966677-33957369 | 20130731
          Length = 867

 Score = 1462 bits (3784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 716/868 (82%), Positives = 766/868 (88%), Gaps = 7/868 (0%)

Query: 1   MAAFTSLSLSPHTLY-LRPKPPPRXXXXXXXXXXLPGTDG---KAPRKRTRRVEGPRKSM 56
           MA  TSL   PH+L  LR KP               G DG   + P+KR RR+EGPRKSM
Sbjct: 1   MATLTSLPPLPHSLLSLRSKPT--RLSVSASALSASGNDGSTSRVPQKRRRRIEGPRKSM 58

Query: 57  EDSVQRKMEQFYEGADGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDVDELG 116
           EDSVQR+MEQFYEG DGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAG+MFPD D+LG
Sbjct: 59  EDSVQRRMEQFYEGNDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGIMFPDYDDLG 118

Query: 117 VQKVIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKR 176
           VQK+IPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKR
Sbjct: 119 VQKIIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIKKR 178

Query: 177 LKEHGIFLSSRLRVFSTRTKFVAGPFEVEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKI 236
           LKEHGIFL SRL++F T+ KFVAGPFE+EPIRVTHSIPDCCGLVLRCSDGTILHTGDWKI
Sbjct: 179 LKEHGIFLPSRLKIFRTKNKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKI 238

Query: 237 DETPLDGNVFDREALEELSKEGVTLMMSDSTNILSPGRTTSESSVADALLRHISASKGRV 296
           DETPLDG VFDRE LEELSKEGVTLMMSDSTN+LSPGRTTSES VAD+LLRHISASKGRV
Sbjct: 239 DETPLDGKVFDREGLEELSKEGVTLMMSDSTNVLSPGRTTSESVVADSLLRHISASKGRV 298

Query: 297 ITTQFASNLHRIGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPFDPSTLVKVEDID 356
           ITTQFASNLHRIGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPFDPSTLVK EDID
Sbjct: 299 ITTQFASNLHRIGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPFDPSTLVKAEDID 358

Query: 357 AYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLSKEDVVLYSAKVIPGNESRVMEMLN 416
           AYAPKDLLIVTTGSQAEPRAALNLAS+GSSHAFKL+KED+VLYSAKVIPGNESRVMEM+N
Sbjct: 359 AYAPKDLLIVTTGSQAEPRAALNLASFGSSHAFKLTKEDIVLYSAKVIPGNESRVMEMMN 418

Query: 417 RISEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKST 476
           RISEIGSTIVMG+NE LHTSGHAYRGELEEVLRIVKPQHFLP+HGE LFLKEHE LGKST
Sbjct: 419 RISEIGSTIVMGRNENLHTSGHAYRGELEEVLRIVKPQHFLPVHGEYLFLKEHESLGKST 478

Query: 477 GIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSSELFLDERL 536
           GIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTS ELFLDER+
Sbjct: 479 GIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSGELFLDERM 538

Query: 537 RIALDGIIVISMEIFRPKNLDNFAENTLKGKIRITTRCLWLDKGKLIDAIYKAARAALSS 596
           RIALDGIIV+SMEIFRPKNL++ A NTLKGKIRITTRCLWLDKGKL+DA+YKAA AALSS
Sbjct: 539 RIALDGIIVVSMEIFRPKNLESLAGNTLKGKIRITTRCLWLDKGKLLDALYKAAHAALSS 598

Query: 597 CPVNSPLSHLERTVAEVLRKMVRKYSGKRPEVIAIAIENPAAVLADEINTKLSGKSHVAP 656
           CPV SPL H+ERTV+EVLRKMVRKYSGKRPEVIAIAIENP AV ADEINTKLSGKS V P
Sbjct: 599 CPVKSPLPHMERTVSEVLRKMVRKYSGKRPEVIAIAIENPGAVFADEINTKLSGKSQVGP 658

Query: 657 GTSTLRKAIAGHGKENQYTTLKTRDDGIDVEGLVPEEETTTSGAEGDLSNSEDSDDFLKP 716
           G ST R+++  H KENQ T L+ RDDGID+EGL+ E ET T+ AEGDLS+S +SD+F KP
Sbjct: 659 GISTFRRSVDEHRKENQSTALQIRDDGIDIEGLLVEIETITTAAEGDLSDSGESDEFWKP 718

Query: 717 FIASFKEKSVNANNGYVSRNEHKFNIKKDDSEDTNEAKSEETSNSXXXXXXXXXXXXXXX 776
           FIAS  EKS+ ANNGYVSR EHK N K+DDSED +EAKSEE S+S               
Sbjct: 719 FIASSVEKSIKANNGYVSRKEHKSNTKQDDSEDIDEAKSEEMSDSEPESSKSEKKNKWKT 778

Query: 777 XXXXRLISMRGKLRDRFQVVKGRMALWEEISQNLLADGISRSPGQCKSLWTSLVLKYEEI 836
               +LI +R  LRDRF+VVKGRMALWEEISQ+LLADGISRSPGQCKSLWTSL LKYEEI
Sbjct: 779 EEVKKLIDLRSDLRDRFKVVKGRMALWEEISQSLLADGISRSPGQCKSLWTSLALKYEEI 838

Query: 837 KN-TDGNKSWQYREDMERAMSNEETPAT 863
           KN  D  K+WQY EDMER +S++ETPAT
Sbjct: 839 KNGKDSRKNWQYLEDMERILSSDETPAT 866


>Medtr4g103770.1 | RNA-metabolising metallo-beta-lactamase | HC |
           chr4:42916986-42924712 | 20130731
          Length = 721

 Score = 1151 bits (2978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/686 (82%), Positives = 614/686 (89%), Gaps = 10/686 (1%)

Query: 1   MAAFTSLSLSP----HTLYLRPKPPPRXXXXXXXXXXLP-GTDG-KAPRKRTRRVEGPRK 54
           M    S+SLS     +T + R  P  R          LP  TDG K   KR RR+EGPRK
Sbjct: 1   MVTCNSISLSHNLHFYTRFHRLHPTRRSHYCRFRSNALPRDTDGAKVVHKRPRRIEGPRK 60

Query: 55  SMEDSVQRKMEQFYEGADGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDVDE 114
           SMEDSVQRKMEQFYEG+DGPPLRVLPIGGLGEIGMNCMLVGNHDRYIL+DAGVMFP  DE
Sbjct: 61  SMEDSVQRKMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILVDAGVMFPGDDE 120

Query: 115 LGVQKVIPDTTFIRKWSHKIEALVITHGHEDHIGALPWVIPALDSNTPIFASSFTMELIK 174
           LGVQK+IPDTTFI+KWSHKIEA+VITHGHEDHIGALPWVIP LDS TP+FASSFTMELI+
Sbjct: 121 LGVQKIIPDTTFIKKWSHKIEAVVITHGHEDHIGALPWVIPMLDSQTPVFASSFTMELIR 180

Query: 175 KRLKEHGIFLSSRLRVFSTRTKFVAGPFEVEPIRVTHSIPDCCGLVLRCSDGTILHTGDW 234
           KRLK+HGIF+ SRL+VF TR KFVAGPFE+EPI V+HSIPDCCGLVLRCSDGTILHTGDW
Sbjct: 181 KRLKDHGIFVPSRLKVFRTRKKFVAGPFEIEPITVSHSIPDCCGLVLRCSDGTILHTGDW 240

Query: 235 KIDETPLDGNVFDREALEELSKEGVTLMMSDSTNILSPGRTTSESSVADALLRHISASKG 294
           KIDETPLDG VFDREALEELSKEGVTLMMSDSTN+LSPGRT SES VADALLRHISA+KG
Sbjct: 241 KIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTMSESVVADALLRHISAAKG 300

Query: 295 RVITTQFASNLHRIGSVKAAADLTGRKLVFVGMSLRTYLEAAWKDGKAPFDPSTLVKVED 354
           RVITTQF+SN+HR+GS+KAAADLTGRKLVF GMSLRTYL+AAWKDGK P D STLVKVED
Sbjct: 301 RVITTQFSSNIHRLGSLKAAADLTGRKLVFAGMSLRTYLDAAWKDGKVPIDSSTLVKVED 360

Query: 355 IDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFKLSKEDVVLYSAKVIPGNESRVMEM 414
           + AYAPKDLLIVTTGSQAEPRAALNLASYGSSHAF+L+KED VLYSAKVIPGNESRVMEM
Sbjct: 361 MHAYAPKDLLIVTTGSQAEPRAALNLASYGSSHAFELTKEDTVLYSAKVIPGNESRVMEM 420

Query: 415 LNRISEIGSTIVMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGK 474
           LNRISEIG TIVMGKNE LHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGK
Sbjct: 421 LNRISEIGPTIVMGKNECLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGK 480

Query: 475 STGIRHTAVIKNGEMLGVSHLRNRRVLSNGFISLGKENLQLKYSDGDKAFGTSSELFLDE 534
           STGIRHTAVIKNGEMLGVSHLRNR+VLSNGFISLGKENL+LKYSDGDKAFGTSSELF+DE
Sbjct: 481 STGIRHTAVIKNGEMLGVSHLRNRKVLSNGFISLGKENLELKYSDGDKAFGTSSELFIDE 540

Query: 535 RLRIALDGIIVISMEIFRPKNLDNFAENTLKGKIRITTRCLWLDKGKLIDAIYKAARAAL 594
           RLRIALDGIIV+SME+ R ++LD+  ENTLKGKIRITTRCLWLDKGKL+DA++KAA A+L
Sbjct: 541 RLRIALDGIIVVSMEVCRAQSLDSSVENTLKGKIRITTRCLWLDKGKLLDALHKAAHASL 600

Query: 595 SSCPVNSPLSHLERTVAEVLRKMVRKYSGKRPEVIAIAIENPAAVLADEINTKLSGKSHV 654
           SSCPVN PL+H+E+TV+E+LRKMVRKYSGKRPEVIA+AIENP AVLA EINTKLSGKS+V
Sbjct: 601 SSCPVNCPLAHMEKTVSEMLRKMVRKYSGKRPEVIAVAIENPGAVLATEINTKLSGKSYV 660

Query: 655 APGTSTLRKAIAGHGKENQYTTLKTR 680
             G ST R  +    KENQ T ++ R
Sbjct: 661 G-GISTFRNVVH---KENQSTKMQMR 682


>Medtr7g014365.1 | hypothetical protein | LC | chr7:4300616-4304609
           | 20130731
          Length = 593

 Score = 61.2 bits (147), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/42 (71%), Positives = 33/42 (78%)

Query: 715 KPFIASFKEKSVNANNGYVSRNEHKFNIKKDDSEDTNEAKSE 756
           +PFIAS  EKS+ A NGYVSR EHK N KKDDSED +EA SE
Sbjct: 204 RPFIASSVEKSIKATNGYVSRKEHKSNSKKDDSEDIDEANSE 245