Miyakogusa Predicted Gene

Lj0g3v0260519.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0260519.1 Non Characterized Hit- tr|D8PLJ6|D8PLJ6_SCHCM
Putative uncharacterized protein OS=Schizophyllum
comm,32.18,9e-17,Mpv17_PMP22,Mpv17/PMP22; SUBFAMILY NOT NAMED,NULL;
PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 (MPV17),Mpv,CUFF.17176.1
         (219 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g078760.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...   335   2e-92
Medtr4g078760.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...   320   6e-88
Medtr6g038540.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    65   5e-11
Medtr1g106775.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    63   2e-10
Medtr8g103490.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    57   2e-08
Medtr1g008350.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    55   7e-08
Medtr7g088590.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    49   3e-06
Medtr7g088590.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) fami...    48   7e-06

>Medtr4g078760.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr4:30435130-30437233 | 20130731
          Length = 219

 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 170/221 (76%), Positives = 183/221 (82%), Gaps = 4/221 (1%)

Query: 1   MDAIG--GGHCWFSNWNPLPQPRRRRIRSHSDSPASAAGGGLRFPVQQAANAASLALTGD 58
           MDAIG   G C F  W+P P  RRRRIRS+S SP SA GGG +FP++QA  AASL LTGD
Sbjct: 1   MDAIGFGNGFCGFWKWDPKPDTRRRRIRSNSGSPGSAVGGGYQFPLKQALTAASLTLTGD 60

Query: 59  TIAQVTQRWRKTKKEASSGTVSQDELWSNLSDHDWLRALRMTSYGFLFYGPGSYAWYQCL 118
           TIAQ++ RW K K+  S    SQD L   LS+HD LRALRMTSYGFLFYGPGS+AWYQ L
Sbjct: 61  TIAQLSNRWNKAKE--SGENASQDVLSKLLSEHDLLRALRMTSYGFLFYGPGSFAWYQLL 118

Query: 119 DHFLGKPTVQNLMLKVLLNQVVLGPSVIAVIFAWNNLWQQKLSELPEKYRRDALPTLLYG 178
           DH L KP VQNLMLKVLLNQVVLGP VIAVIFAWNNLWQQKLSELPEKY+RDALPTLLYG
Sbjct: 119 DHCLPKPNVQNLMLKVLLNQVVLGPCVIAVIFAWNNLWQQKLSELPEKYKRDALPTLLYG 178

Query: 179 FRFWIPVSILNFWVVPLQARVAFMSMGSIFWNFYLSSTMSK 219
           FRFWIPVS+LNFWVVPL ARV FMSMGSIFWNFYLSSTM+K
Sbjct: 179 FRFWIPVSVLNFWVVPLPARVGFMSMGSIFWNFYLSSTMNK 219


>Medtr4g078760.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr4:30435130-30437233 | 20130731
          Length = 214

 Score =  320 bits (820), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 165/221 (74%), Positives = 178/221 (80%), Gaps = 9/221 (4%)

Query: 1   MDAIG--GGHCWFSNWNPLPQPRRRRIRSHSDSPASAAGGGLRFPVQQAANAASLALTGD 58
           MDAIG   G C F  W+P P  RRRRIRS+S SP SA GGG +FP++QA  AASL LTGD
Sbjct: 1   MDAIGFGNGFCGFWKWDPKPDTRRRRIRSNSGSPGSAVGGGYQFPLKQALTAASLTLTGD 60

Query: 59  TIAQVTQRWRKTKKEASSGTVSQDELWSNLSDHDWLRALRMTSYGFLFYGPGSYAWYQCL 118
           TIAQ++ RW K K+  S    SQD L   LS+HD LRALRMTSYGFLFYGPGS+AWYQ L
Sbjct: 61  TIAQLSNRWNKAKE--SGENASQDVLSKLLSEHDLLRALRMTSYGFLFYGPGSFAWYQLL 118

Query: 119 DHFLGKPTVQNLMLKVLLNQVVLGPSVIAVIFAWNNLWQQKLSELPEKYRRDALPTLLYG 178
           DH L KP VQNLMLKV     VLGP VIAVIFAWNNLWQQKLSELPEKY+RDALPTLLYG
Sbjct: 119 DHCLPKPNVQNLMLKV-----VLGPCVIAVIFAWNNLWQQKLSELPEKYKRDALPTLLYG 173

Query: 179 FRFWIPVSILNFWVVPLQARVAFMSMGSIFWNFYLSSTMSK 219
           FRFWIPVS+LNFWVVPL ARV FMSMGSIFWNFYLSSTM+K
Sbjct: 174 FRFWIPVSVLNFWVVPLPARVGFMSMGSIFWNFYLSSTMNK 214


>Medtr6g038540.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr6:13814332-13819860 | 20130731
          Length = 244

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 8/145 (5%)

Query: 70  TKKEASSGTVSQDELWSNL------SDHDWLRALRMTSYGFLFYGPGSYAWYQCLDHFLG 123
           TK   SS   +  +L S +      + +D  R  RMT YG L  GP  + ++  L   L 
Sbjct: 67  TKCITSSLIFTAADLTSQMITLPSSASYDLKRTSRMTIYGLLILGPSQHKYFNFLSKILP 126

Query: 124 KPTVQNLMLKVLLNQVVLGPSVIAVIFAWNNLWQ-QKLSELPEKYRRDALPTLLYGFRFW 182
              V   + K+L+ Q + GP +  V F++    Q +   E+  + +RD LPTL+ G  FW
Sbjct: 127 NRDVATTLKKILMGQALFGPVINTVFFSYIGALQGESGPEIVARLKRDLLPTLIGGAMFW 186

Query: 183 IPVSILNFWVVPLQARVAFMSMGSI 207
                + F  VP+  +  F+ M S+
Sbjct: 187 PVCDFVTFKFVPVHLQY-FIEMSSL 210


>Medtr1g106775.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr1:48311526-48306713 | 20130731
          Length = 259

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 5/153 (3%)

Query: 63  VTQRWRKTKKEASSGTVSQDELWSNLSDHDWLRALRMTSYGFLFYGPGSYAWYQCLDHFL 122
           VT     T  + SS T+ +    S     D++R LRM  YG +  GP  + W+  +    
Sbjct: 99  VTSALIYTAADLSSQTIERQSSKS----FDFIRTLRMAGYGMIILGPSLHFWFNFVSKLF 154

Query: 123 GKPTVQNLMLKVLLNQVVLGPSVIAVIFAWN-NLWQQKLSELPEKYRRDALPTLLYGFRF 181
               + + + K+ + Q + GP++  + F+ N  L  +   E+  + +RD LPT+L G  +
Sbjct: 155 PGRDIFSTLKKMAMGQGIYGPAMTVIFFSLNAGLQGENSKEIVARLKRDLLPTMLNGVMY 214

Query: 182 WIPVSILNFWVVPLQARVAFMSMGSIFWNFYLS 214
           W     + F   P+  +    +  S  W  Y++
Sbjct: 215 WPMCDFITFRFAPVHLQPLVSNSFSYLWTIYMT 247


>Medtr8g103490.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr8:43543333-43545462 | 20130731
          Length = 226

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 9/181 (4%)

Query: 43  PVQ-QAANAASLALTGDTIAQ-VTQRWRKTKKEASSGTVSQDELWSNLSDHDWLRALRMT 100
           PV+ Q A +  L   GD  AQ +T     +        +S  +   +    DW R    +
Sbjct: 19  PVRTQVATSGVLWAVGDVTAQYITHSAAASSSSKKRLQLSATKAADDKFVIDWRRVAVTS 78

Query: 101 SYGFLFYGPGSYAWYQCLDHFLGKP------TVQNLMLKVLLNQVVLGPSVIAVIFAWNN 154
            +G  F GP  + WY+ L+ F+         T +++  KV ++ ++ GP  + V F++  
Sbjct: 79  MFGVGFVGPVGHFWYEGLEKFISHKLQLMPQTARSVATKVAMDGLIFGPVHLFVFFSYMG 138

Query: 155 LWQQK-LSELPEKYRRDALPTLLYGFRFWIPVSILNFWVVPLQARVAFMSMGSIFWNFYL 213
           L   K + E+ E  +R+  P L+     W  V + NF  VP++ ++ ++++  +  + +L
Sbjct: 139 LSAGKTIPEVKEDLKRNYFPALVLEGGVWPIVQVFNFRYVPVKYQLLYVNLFCLLDSAFL 198

Query: 214 S 214
           S
Sbjct: 199 S 199


>Medtr1g008350.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr1:861041-865731 | 20130731
          Length = 214

 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 43  PVQ-QAANAASLALTGDTIAQVTQRWRKTKKEASSGTVSQDELWSNLSDHDWLRALRMTS 101
           PV+ Q  ++  +   GD  AQ    +    +  ++ + SQD+        +W R    + 
Sbjct: 16  PVKTQVISSGFIWGAGDVAAQYVTHYTAKTRGVTNESHSQDD--KKEFKINWKRVSTTSL 73

Query: 102 YGFLFYGPGSYAWYQCLDHF-----LGKP-TVQNLMLKVLLNQVVLGPSVIAVIFAWNNL 155
           +G  F GP  + WY+ LD F     L KP + + +  KV  +  + GP  + V F +   
Sbjct: 74  FGLAFVGPVGHYWYEGLDKFIRHRLLLKPNSFRFVAAKVGADGFLFGPLDLLVFFTYMGF 133

Query: 156 WQQK-LSELPEKYRRDALPTLLYGFRFWIPVSILNFWVVPLQARVAFMSMGSIFWNFYLS 214
              K + ++ E  +RD LP L+     W  V + NF  VP++ ++ +++   +  + +LS
Sbjct: 134 STGKSVPQIKEDVKRDFLPALILEGGIWPVVQVANFRYVPVRYQLLYVNFFCLLDSCFLS 193


>Medtr7g088590.2 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr7:34521820-34525349 | 20130731
          Length = 245

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 21/160 (13%)

Query: 41  RFPVQ-QAANAASLALTGDTIAQVTQRWRKTKKEASSGTVSQDELWSNLSDHDWLRALRM 99
           ++PV  +A  +A L L GD I Q+     +T                     D  R    
Sbjct: 103 KYPVPVKALTSAILNLIGDLICQLVIDKVQTP--------------------DLKRTFLF 142

Query: 100 TSYGFLFYGPGSYAWYQCLDHFLGKPTVQNLMLKVLLNQVVLGPSVIAVIFAWNNLWQQK 159
           +  G +  GP  + WY  L   +  P     +L+++L+Q V  P  + V  +     + +
Sbjct: 143 SFLGLVLVGPTLHFWYLYLSQLVTLPGTSGAILRLVLDQFVFSPIFLGVFLSSLVTLEGR 202

Query: 160 LSELPEKYRRDALPTLLYGFRFWIPVSILNFWVVPLQARV 199
            S+   K +++    +L  ++ WIP   LNF  VP Q ++
Sbjct: 203 PSQAVPKLKQEWFSAVLANWQLWIPFQFLNFRFVPQQFQI 242


>Medtr7g088590.1 | peroxisomal membrane 22 kDa (Mpv17/PMP22) family
           protein | HC | chr7:34521931-34525157 | 20130731
          Length = 257

 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 21/160 (13%)

Query: 41  RFPVQ-QAANAASLALTGDTIAQVTQRWRKTKKEASSGTVSQDELWSNLSDHDWLRALRM 99
           ++PV  +A  +A L L GD I Q+     +T                     D  R    
Sbjct: 103 KYPVPVKALTSAILNLIGDLICQLVIDKVQTP--------------------DLKRTFLF 142

Query: 100 TSYGFLFYGPGSYAWYQCLDHFLGKPTVQNLMLKVLLNQVVLGPSVIAVIFAWNNLWQQK 159
           +  G +  GP  + WY  L   +  P     +L+++L+Q V  P  + V  +     + +
Sbjct: 143 SFLGLVLVGPTLHFWYLYLSQLVTLPGTSGAILRLVLDQFVFSPIFLGVFLSSLVTLEGR 202

Query: 160 LSELPEKYRRDALPTLLYGFRFWIPVSILNFWVVPLQARV 199
            S+   K +++    +L  ++ WIP   LNF  VP Q ++
Sbjct: 203 PSQAVPKLKQEWFSAVLANWQLWIPFQFLNFRFVPQQFQM 242