Miyakogusa Predicted Gene

Lj0g3v0260419.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0260419.1 Non Characterized Hit- tr|I1M8E5|I1M8E5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42083
PE,81.65,0,seg,NULL; coiled-coil,NULL,CUFF.17163.1
         (654 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g022045.1 | plant/F18O14-17 protein | HC | chr1:6796922-67...   920   0.0  

>Medtr1g022045.1 | plant/F18O14-17 protein | HC |
           chr1:6796922-6794973 | 20130731
          Length = 649

 Score =  920 bits (2378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/632 (73%), Positives = 510/632 (80%), Gaps = 15/632 (2%)

Query: 31  TTPINPESCSAQSELDHDSFNKEPVANHLNNQQVLLSKLEELVRNLSDVVARLESKLQTP 90
           + P++PESCS QS  + +S ++    +   NQQVLL+KLEELVRNLSD+VARLESK    
Sbjct: 25  SDPLSPESCSLQSPSNDESVSESKANSDNFNQQVLLNKLEELVRNLSDIVARLESKQPQQ 84

Query: 91  PPLEMAQEKGRVAETKGAESGDVDGGSSNIDK-----EIDGRPRDGERARGMSVTKYTPF 145
              ++ QEK R  + KG    DVD G S+  K     E +G+ ++GERA+GMSVTKYTPF
Sbjct: 85  EVPKVVQEKSRFTQIKG----DVDDGRSSDKKVVEDVEFEGKAQNGERAKGMSVTKYTPF 140

Query: 146 WSERFQFASALKLDSDATCINVLPFKDHEGLSKYVAVSDEKRRVYVFLRNGDVLVEFDTS 205
           WSERFQFASA+KLDSDATCINVLPFKDHEGLSKYVAVSDEK RVYVFLRNGDVLVEFDT 
Sbjct: 141 WSERFQFASAVKLDSDATCINVLPFKDHEGLSKYVAVSDEKGRVYVFLRNGDVLVEFDTL 200

Query: 206 MESPITAMVSYTSAYKNESFVVTGHGNGEILIHRVWEGSGGDDWSSLFMENVGKFVSPEN 265
           ++SPITAMVSYTSAYKNESFVVTGH NG +LIHRVWEGS G+DWSS+FMENVGKF SPEN
Sbjct: 201 LDSPITAMVSYTSAYKNESFVVTGHENGGMLIHRVWEGSSGEDWSSVFMENVGKFASPEN 260

Query: 266 HVSRLPVTVLEVHFVGRMKYILSADTSGKIKVFKENGSFYGSVMPSSRPLVFLKQRLMFL 325
           H + L +T+LEVHFVGRMKYILSAD SGKIKVFKENG FYGSV PS+RPLVFLKQRLMFL
Sbjct: 261 HENGLAITLLEVHFVGRMKYILSADISGKIKVFKENGVFYGSVTPSARPLVFLKQRLMFL 320

Query: 326 TETGAGSLDLRGMKIRETECEGLNHSVARTYVFDATERSKAYGVTSEGDLIYVLLLGDVM 385
           TETGAGSLDLRGMKIRE+ECEGLNHS+AR YVFDATERSKAYG TS+GDLIYVLLLGDVM
Sbjct: 321 TETGAGSLDLRGMKIRESECEGLNHSLARGYVFDATERSKAYGFTSDGDLIYVLLLGDVM 380

Query: 386 NFKCRVRYKKKFDMDEPVALQAIKGYLLIVNPKKVLVFNVSSPHYVRVGVPRPVFSSSID 445
           NFKCRVRYKKKF+MDEP+ALQAIKGYLLIVNPKKV VFNVSSPHYVR+GVPRPVFSSSID
Sbjct: 381 NFKCRVRYKKKFEMDEPLALQAIKGYLLIVNPKKVFVFNVSSPHYVRIGVPRPVFSSSID 440

Query: 446 EIRSSFLNYPTTSSDTETRVMIPLIASDREKXXXXXXXXXXXXMYHSNLPIFKGDFNTML 505
           E+RSSFLN+PT S D E RVMIPLIASDREK            MYHSNLPI+KG+FNTML
Sbjct: 441 ELRSSFLNHPTPSLDDEARVMIPLIASDREKLVIVGLGGGYVGMYHSNLPIYKGEFNTML 500

Query: 506 WTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFSSTSASTGAPLXXXXXXXXX--XXX 563
           WTSPVLFF+LFLFGAWHFFAKKKEALTSWGPDDP +S S   GAPL              
Sbjct: 501 WTSPVLFFVLFLFGAWHFFAKKKEALTSWGPDDPLASAS---GAPLASSSSGERSFVDSS 557

Query: 564 XXXXXXXMELXXXXXXX-XXXXXXXXXXXXXXXAASSYRLGSADHNPRPASVDPEFRAAS 622
                  M+L                       AAS+YRLGSADHNPRPASVDP+FRA S
Sbjct: 558 SRTSADVMDLRSGALRGPPPPRRYGSPTRFPAGAASTYRLGSADHNPRPASVDPDFRAGS 617

Query: 623 ELKFRASTMDPPGFPKRRDGMFVGNQVVNDRS 654
           E+K+RASTMDPPGFPKRRDGMFVGNQ VNDRS
Sbjct: 618 EIKYRASTMDPPGFPKRRDGMFVGNQAVNDRS 649