Miyakogusa Predicted Gene
- Lj0g3v0259639.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0259639.1 Non Characterized Hit- tr|B4FW77|B4FW77_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,26.59,2e-18,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.17102.1
(454 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 701 0.0
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 342 4e-94
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 332 4e-91
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 319 3e-87
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 309 3e-84
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 306 2e-83
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 306 3e-83
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 277 1e-74
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 272 5e-73
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 272 5e-73
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 271 9e-73
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 271 9e-73
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 268 1e-71
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 268 1e-71
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 268 1e-71
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 268 1e-71
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 267 2e-71
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 260 2e-69
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 256 3e-68
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 254 1e-67
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 254 2e-67
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 253 2e-67
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 252 4e-67
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 251 1e-66
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 248 1e-65
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 246 4e-65
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 242 6e-64
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 241 8e-64
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 241 1e-63
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 240 2e-63
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 230 2e-60
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 229 3e-60
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 229 5e-60
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 226 3e-59
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 226 5e-59
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 225 6e-59
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 225 9e-59
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 224 1e-58
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 223 2e-58
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 223 3e-58
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 222 7e-58
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 220 2e-57
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 219 4e-57
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 219 4e-57
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 219 4e-57
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 219 5e-57
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 219 5e-57
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 216 3e-56
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 216 4e-56
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 214 2e-55
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 213 2e-55
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 212 6e-55
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 212 7e-55
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 210 2e-54
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 210 2e-54
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 209 5e-54
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 209 5e-54
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 209 5e-54
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 209 6e-54
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 208 7e-54
Medtr4g113830.1 | organelle transcript processing protein, putat... 208 8e-54
Medtr5g006420.1 | organelle transcript processing protein, putat... 208 8e-54
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 208 9e-54
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 208 1e-53
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 207 1e-53
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 207 1e-53
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 207 1e-53
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 207 1e-53
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 207 1e-53
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 207 2e-53
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 207 2e-53
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 207 2e-53
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 207 2e-53
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 206 3e-53
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 205 7e-53
Medtr3g052720.1 | organelle transcript processing protein, putat... 205 7e-53
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 204 1e-52
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 204 1e-52
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 204 1e-52
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 204 1e-52
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 204 2e-52
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 204 2e-52
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 204 2e-52
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 204 2e-52
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 204 2e-52
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 204 2e-52
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 204 2e-52
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 203 3e-52
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 203 3e-52
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 203 4e-52
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 202 4e-52
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 202 6e-52
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 201 9e-52
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 201 9e-52
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 201 1e-51
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 200 2e-51
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 199 4e-51
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 4e-51
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 5e-51
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 199 6e-51
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 198 9e-51
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 198 9e-51
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 197 1e-50
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 197 2e-50
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 197 2e-50
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 197 2e-50
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 197 2e-50
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 196 3e-50
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 196 4e-50
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 196 4e-50
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 196 4e-50
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 196 5e-50
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 195 8e-50
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 194 1e-49
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 193 3e-49
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 192 4e-49
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 192 5e-49
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 192 6e-49
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 192 6e-49
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 192 6e-49
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 192 7e-49
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 192 7e-49
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 192 8e-49
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 191 9e-49
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 191 1e-48
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 191 1e-48
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 191 2e-48
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 190 2e-48
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 190 2e-48
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 190 2e-48
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 190 3e-48
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 189 4e-48
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 189 5e-48
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 189 6e-48
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 189 6e-48
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 189 7e-48
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 188 1e-47
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 188 1e-47
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 187 2e-47
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 187 2e-47
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 187 2e-47
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 187 2e-47
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 187 2e-47
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 186 4e-47
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 186 6e-47
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 185 8e-47
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 185 1e-46
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 184 1e-46
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 184 1e-46
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 184 2e-46
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 183 2e-46
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 182 4e-46
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 181 9e-46
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 181 1e-45
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 181 1e-45
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 181 1e-45
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 181 1e-45
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 181 2e-45
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 181 2e-45
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 180 2e-45
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 180 3e-45
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 180 3e-45
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 179 4e-45
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 179 4e-45
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 179 4e-45
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 179 5e-45
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 178 8e-45
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 178 1e-44
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 176 4e-44
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 176 4e-44
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 176 4e-44
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 175 7e-44
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 175 8e-44
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 174 1e-43
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 174 1e-43
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 174 2e-43
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 174 2e-43
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 174 2e-43
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 174 2e-43
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 174 2e-43
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 173 3e-43
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 173 3e-43
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 173 3e-43
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 173 3e-43
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 173 4e-43
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 172 5e-43
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 172 5e-43
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 172 5e-43
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 172 6e-43
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 172 6e-43
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 172 7e-43
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 171 9e-43
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 171 1e-42
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 171 1e-42
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 171 2e-42
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 171 2e-42
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 171 2e-42
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 170 2e-42
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 170 3e-42
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 169 4e-42
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 169 4e-42
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 169 4e-42
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 169 5e-42
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 169 5e-42
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 169 6e-42
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 169 6e-42
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 168 1e-41
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 168 1e-41
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 168 1e-41
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 167 2e-41
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 167 2e-41
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 166 4e-41
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 166 6e-41
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 165 8e-41
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 165 1e-40
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 164 1e-40
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 164 2e-40
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 164 2e-40
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 164 2e-40
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 163 3e-40
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 163 4e-40
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 162 5e-40
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 162 9e-40
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 162 9e-40
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 161 1e-39
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 161 1e-39
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 161 1e-39
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 160 2e-39
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 160 3e-39
Medtr1g059720.1 | organelle transcript processing protein, putat... 157 1e-38
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 156 3e-38
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 156 4e-38
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 156 5e-38
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 156 5e-38
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 156 5e-38
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 156 5e-38
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 156 5e-38
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 155 7e-38
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 155 7e-38
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 154 2e-37
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 153 3e-37
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 152 9e-37
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 152 1e-36
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 151 1e-36
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 149 5e-36
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 149 6e-36
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 149 6e-36
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 148 8e-36
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 148 1e-35
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 148 1e-35
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 147 2e-35
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 147 3e-35
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 145 6e-35
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 145 1e-34
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 144 2e-34
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 143 4e-34
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 142 7e-34
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 141 1e-33
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 141 2e-33
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 140 2e-33
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 140 2e-33
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 139 4e-33
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 139 4e-33
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 139 5e-33
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 139 8e-33
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 138 9e-33
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 138 1e-32
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 138 1e-32
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 137 2e-32
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 137 3e-32
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 136 3e-32
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 136 4e-32
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 135 1e-31
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 134 1e-31
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 133 4e-31
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 133 4e-31
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 130 2e-30
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 130 3e-30
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 129 4e-30
Medtr3g117150.1 | organelle transcript processing protein, putat... 129 5e-30
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 129 6e-30
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 129 6e-30
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 128 1e-29
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 128 1e-29
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 128 1e-29
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 127 2e-29
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 127 3e-29
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 125 6e-29
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 125 6e-29
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 125 1e-28
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 125 1e-28
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 124 2e-28
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 123 3e-28
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 122 7e-28
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 122 8e-28
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 8e-28
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 8e-28
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 122 9e-28
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 122 1e-27
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 120 2e-27
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 120 2e-27
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 120 2e-27
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 120 2e-27
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 120 2e-27
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 120 2e-27
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 120 2e-27
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 120 2e-27
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 120 2e-27
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 120 2e-27
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 120 3e-27
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 120 4e-27
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 119 6e-27
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 118 9e-27
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 118 1e-26
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 118 1e-26
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 118 1e-26
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 118 2e-26
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 117 2e-26
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 2e-26
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 117 3e-26
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 117 3e-26
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 117 3e-26
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 117 3e-26
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 117 3e-26
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 117 3e-26
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 116 5e-26
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 116 5e-26
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 7e-26
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 115 8e-26
Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-241338... 115 8e-26
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 115 8e-26
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 9e-26
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 9e-26
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 115 1e-25
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 1e-25
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 1e-25
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 115 1e-25
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 115 1e-25
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 114 1e-25
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 114 1e-25
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 114 1e-25
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 114 1e-25
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 114 2e-25
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 114 2e-25
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 114 2e-25
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 2e-25
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 2e-25
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 114 3e-25
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 114 3e-25
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 3e-25
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 114 3e-25
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 114 3e-25
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 113 3e-25
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 113 3e-25
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 113 3e-25
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 113 4e-25
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 113 4e-25
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 112 7e-25
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 112 9e-25
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 111 1e-24
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 111 2e-24
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 111 2e-24
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 111 2e-24
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 110 2e-24
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 110 2e-24
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 110 2e-24
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 110 4e-24
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 4e-24
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 110 4e-24
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 109 5e-24
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 109 5e-24
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 109 7e-24
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 108 9e-24
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 1e-23
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 108 1e-23
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 108 1e-23
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 1e-23
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 107 3e-23
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 106 5e-23
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 106 6e-23
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 105 7e-23
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 105 7e-23
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 105 9e-23
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 105 1e-22
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 104 2e-22
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 104 2e-22
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 104 2e-22
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 104 2e-22
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 104 2e-22
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 103 3e-22
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 103 3e-22
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 103 4e-22
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 103 4e-22
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 103 5e-22
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 102 6e-22
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 102 7e-22
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 9e-22
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 102 9e-22
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 102 9e-22
Medtr7g011520.1 | pentatricopeptide (PPR) repeat protein | LC | ... 102 9e-22
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 102 1e-21
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 102 1e-21
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 102 1e-21
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 1e-21
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 101 1e-21
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 1e-21
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 100 2e-21
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 100 3e-21
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 100 4e-21
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 5e-21
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 99 6e-21
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 99 6e-21
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 99 6e-21
Medtr7g070420.1 | PPR containing plant-like protein | HC | chr7:... 99 7e-21
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 99 1e-20
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 99 1e-20
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 98 2e-20
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 97 3e-20
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 97 3e-20
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 97 3e-20
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 97 3e-20
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 97 3e-20
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 97 5e-20
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 96 5e-20
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 96 6e-20
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 95 1e-19
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 95 1e-19
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 95 2e-19
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 94 3e-19
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 93 5e-19
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 93 5e-19
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 92 7e-19
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 8e-19
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 92 1e-18
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 92 1e-18
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 92 1e-18
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 92 1e-18
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 92 2e-18
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 2e-18
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 91 2e-18
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 91 2e-18
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 91 2e-18
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 91 2e-18
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 91 3e-18
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 90 4e-18
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 90 5e-18
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 89 7e-18
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 89 8e-18
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 8e-18
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 89 9e-18
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 89 1e-17
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 89 1e-17
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 89 1e-17
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 88 1e-17
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 88 1e-17
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 88 2e-17
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 88 2e-17
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 87 3e-17
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 87 3e-17
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 87 4e-17
Medtr6g079430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 4e-17
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 87 5e-17
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 87 5e-17
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 87 5e-17
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 86 6e-17
Medtr5g018230.2 | PPR containing plant-like protein | HC | chr5:... 86 6e-17
Medtr5g018230.1 | PPR containing plant-like protein | HC | chr5:... 86 6e-17
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 86 7e-17
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 86 9e-17
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 86 9e-17
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 86 9e-17
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 86 9e-17
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 85 1e-16
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 85 1e-16
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 85 1e-16
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 85 1e-16
Medtr1g113010.1 | PPR containing plant-like protein | HC | chr1:... 85 1e-16
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 85 2e-16
Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 85 2e-16
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 3e-16
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 4e-16
Medtr5g042370.1 | PPR containing plant-like protein | HC | chr5:... 84 4e-16
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 5e-16
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 6e-16
Medtr1g040725.1 | acylamino-acid-releasing enzyme, putative | HC... 83 7e-16
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 7e-16
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 82 8e-16
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 82 1e-15
Medtr1g016220.1 | PPR containing plant-like protein | LC | chr1:... 82 1e-15
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 82 2e-15
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 82 2e-15
Medtr6g069200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 2e-15
Medtr6g005000.1 | PPR containing plant-like protein | HC | chr6:... 81 2e-15
Medtr6g478220.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 3e-15
Medtr8g102650.1 | PPR containing plant-like protein | HC | chr8:... 80 4e-15
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 80 5e-15
Medtr1g040765.1 | PPR containing plant-like protein | HC | chr1:... 80 5e-15
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 80 6e-15
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 79 8e-15
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/439 (74%), Positives = 383/439 (87%), Gaps = 1/439 (0%)
Query: 16 SSTARHTHFLLVFAKHFSSY-DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSM 74
S + + FLL + FS+ DVY ANLNI A SRAGNITAARQ+FDK KD+VT+NSM
Sbjct: 7 SISQKQPSFLLFATRLFSTQQDVYFANLNITALSRAGNITAARQLFDKTSQKDIVTYNSM 66
Query: 75 LTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN 134
LTAYW +GF QHS++LF+++P+KN+VSWN+++ C+QND +++AF+YF AMPE+N ASYN
Sbjct: 67 LTAYWQNGFLQHSKSLFNSIPIKNIVSWNSIITACIQNDNINDAFSYFTAMPEKNVASYN 126
Query: 135 AMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN 194
AM+SGF+K GR+ +A+++F+E+P PNVVSYTVMIDGY+K++ G GI RARALFDAMP RN
Sbjct: 127 AMMSGFVKMGRVEEAKKVFEEIPRPNVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRN 186
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
EVSWTVMI+GLVENGL+EEAWE+F RMPQKNVVA TAMITGFCKQGK+DEAW LFQQIRC
Sbjct: 187 EVSWTVMISGLVENGLHEEAWEVFVRMPQKNVVAFTAMITGFCKQGKIDEAWNLFQQIRC 246
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
+D A WNIMITG+AQNGRGEEALNLFSQMVRTGMQPDDL FVSLFTACASLALLD+GRQT
Sbjct: 247 KDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEGRQT 306
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
AL IKHG +SDLSV+NALVTMYSKCG IV SELAF Q S PDIVSWNTIIAAFAQH LY
Sbjct: 307 NALAIKHGLNSDLSVSNALVTMYSKCGEIVISELAFDQISHPDIVSWNTIIAAFAQHGLY 366
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
+AR YFD M+ GV PDGITFL+LLS CCRAGK+DE++NLF+LMVH YGI PRSEHY+C
Sbjct: 367 DRARYYFDHMVTAGVTPDGITFLNLLSACCRAGKVDETVNLFDLMVHKYGILPRSEHYSC 426
Query: 435 LVDVMSRAGQLQRACEIIR 453
+VDVMSRAGQL RAC++I+
Sbjct: 427 VVDVMSRAGQLLRACKVIQ 445
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 262/449 (58%), Gaps = 34/449 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ N+ + + R + AR++FD MP KDVV+WNS+L+ Y +G+ +R +FD MP
Sbjct: 110 DLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP 169
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
KN +SWN ++A V N ++EA F + + + S+N ++ GF++ +L DA+ LF +
Sbjct: 170 EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDK 229
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
MP + +S+ MI GY +GGG+++AR LFD P R+ +WT M++G V+NG+ +EA
Sbjct: 230 MPVRDAISWNTMISGYA---QGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAK 286
Query: 216 ELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY-------- 267
F MP+KN V+ AMI G+ + K+D A LF+ + CR+I+SWN MITGY
Sbjct: 287 TFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQ 346
Query: 268 -----------------------AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
AQ+G EEALN+F ++ + G + F + CA
Sbjct: 347 ARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCAD 406
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
+A L+ G+Q + +K G+ + V NAL+ MY KCGSI ++ F + D+VSWNT+
Sbjct: 407 IAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTM 466
Query: 365 IAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
+A +A+H +A + F+ M GV+PD IT + +LS C G +D F M DYG
Sbjct: 467 LAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYG 526
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ P S+HY C++D++ RAG+L+ A ++IR
Sbjct: 527 VIPTSKHYTCMIDLLGRAGRLEEAQDLIR 555
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 197/380 (51%), Gaps = 44/380 (11%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
S +D+ N + F R + AR +FDKMP +D ++WN+M++ Y G +R LFD
Sbjct: 200 SDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFD 259
Query: 93 AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL 152
P ++V +W AMV+G VQN MLDEA +F MPE+N SYNAMI+G+++ ++ A+ L
Sbjct: 260 ESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIAREL 319
Query: 153 FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
F+ MPC N+ S+ MI GY ++ G IA+AR FD MP+R+ VSW +I G ++G YE
Sbjct: 320 FESMPCRNISSWNTMITGYGQI---GDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYE 376
Query: 213 EAWELFGRMPQK---------------------------------------NVVASTAMI 233
EA +F + Q A++
Sbjct: 377 EALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALL 436
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ K G +DEA F+ I +D+ SWN M+ GYA++G G +AL +F M G++PD++
Sbjct: 437 AMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEI 496
Query: 294 IFVSLFTACASLALLDQGRQT-YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE-LAFG 351
V + +AC+ LLD+G + Y++ +G ++ + + G + +++ L
Sbjct: 497 TMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRN 556
Query: 352 QTSQPDIVSWNTIIAAFAQH 371
QP SW ++ A H
Sbjct: 557 MPFQPGAASWGALLGASRIH 576
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 187/373 (50%), Gaps = 42/373 (11%)
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
++ D++ WN ++ + +G + +F+ MP ++ VS+NAM++G ++N + A N
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
F MPER+ S+N M++G+++ RL DA+RLF MP +VVS+ ++ GY + G +
Sbjct: 103 FDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYA---QNGYVD 159
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEA---------WE---------------- 216
AR +FD MP +N +SW ++ V NG EEA W+
Sbjct: 160 EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKK 219
Query: 217 ------LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQN 270
LF +MP ++ ++ MI+G+ + G + +A LF + RD+ +W M++GY QN
Sbjct: 220 LGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQN 279
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
G +EA F +M + +++ + ++ +D R+ + + ++S
Sbjct: 280 GMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCR----NISSW 331
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
N ++T Y + G I + F Q D VSW IIA +AQ Y +A + F ++ G
Sbjct: 332 NTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES 391
Query: 391 PDGITFLSLLSVC 403
+ TF LS C
Sbjct: 392 LNRATFGCALSTC 404
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV-RTGMQPDDLIFVSLFTACASLA--L 307
+++ DI WN I+ + +NG + AL++F+ M R+ + + +I L + +LA L
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
DQ + DL N ++T Y + + D+ F + D+VSWN++++
Sbjct: 103 FDQMPE-----------RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSG 151
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
+AQ+ +AR FD M + I++ LL+ G+I+E+ LF
Sbjct: 152 YAQNGYVDEAREVFDNM----PEKNSISWNGLLAAYVHNGRIEEACLLF 196
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 164/412 (39%), Positives = 248/412 (60%), Gaps = 3/412 (0%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N I+ + + G + AR+VFD MP ++VV+W SM+ Y G + + LF MP +NVV
Sbjct: 87 NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVV 146
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN 160
SW M+ G ++ +D+A F +PE++ MI G+ + GRL +A+ LF EM N
Sbjct: 147 SWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRN 206
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGR 220
V ++T M+ GY K G + AR LF+ MP RNEVSWT M+ G ++G +EA+ELF
Sbjct: 207 VFTWTTMVSGYAK---NGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEA 263
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
MP K +VA MI F G++ A +F+ ++ RD +WN MI + + G EAL LF
Sbjct: 264 MPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLF 323
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
++M R G+ + +S+ + CASLA LD GRQ +A +++ FD DL V + L+TMY KC
Sbjct: 324 ARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKC 383
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
G +V ++ F + D+V WN++I ++QH L +A + F M + GV+PD +TF+ +L
Sbjct: 384 GDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVL 443
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
S C +GK+ E +F M Y + P EHYAC+VD++ RAG++ A E++
Sbjct: 444 SACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELV 495
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 168/370 (45%), Gaps = 75/370 (20%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
I + + G + AR++FD+M ++V TW +M++ Y +G +R LF+ MP +N VSW
Sbjct: 183 IGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWT 242
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS 163
AM+ G Q+ + EAF F AMP + + N MI ++FG
Sbjct: 243 AMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMI---LQFGL------------------ 281
Query: 164 YTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ 223
G + RAR +F+ M R+E +W MI GL EA LF RM +
Sbjct: 282 -------------AGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQR 328
Query: 224 KNVV---------------------------------------ASTAMITGFCKQGKVDE 244
+ V ++ +IT + K G +
Sbjct: 329 EGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVR 388
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A +F + +D+ WN MITGY+Q+G GEEALN+F M +G+QPD++ F+ + +AC+
Sbjct: 389 AKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSY 448
Query: 305 LALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWN 362
+ +G + + A+ + + + +V + + G + ++ EL +PD + W
Sbjct: 449 SGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWG 508
Query: 363 TIIAAFAQHV 372
++ A H+
Sbjct: 509 ALLGACRNHM 518
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 154/426 (36%), Positives = 256/426 (60%), Gaps = 3/426 (0%)
Query: 28 FAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHS 87
F + + +V NL +A F ++ +A ++F+K+P + V+W +ML + G +
Sbjct: 195 FFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEA 254
Query: 88 RALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC 147
R LFD MP KNVVSWNAM+A VQ+ +DEA F P ++ S+ MI+G+++ G+L
Sbjct: 255 RKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLD 314
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
+A+ ++ +MP +V + T ++ G + + G I A +F + +R+ + W MI G +
Sbjct: 315 EAREVYNQMPYKDVAAKTALMSGLI---QNGRIDEASQVFSQLNKRDAICWNSMIAGYCQ 371
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
+G EA LF +MP KN V+ MI+G+ + G++D A +F+ + R++ SWN +ITG+
Sbjct: 372 SGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGF 431
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
QNG +AL M + G +PD F ++CA+LA L G+Q + L++K G+ +DL
Sbjct: 432 LQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDL 491
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
V+NAL+ MY+KCG + +E F D++SWN++I+ +A + +A F+QM +
Sbjct: 492 FVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSE 551
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G PD +TF+ +LS C AG ++ ++LF M+ + I P +EHY+CLVD++ R G+L+
Sbjct: 552 GTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEE 611
Query: 448 ACEIIR 453
A I+R
Sbjct: 612 AFNIVR 617
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 214/418 (51%), Gaps = 47/418 (11%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +V+ N I + G I A++VF + K+ T+NSM+T + +G +R LFD
Sbjct: 14 SKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDK 73
Query: 94 MPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER------------------------- 128
M +N+VSWN M+AG + N+M++EA F M ER
Sbjct: 74 MSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELF 133
Query: 129 -------NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
+ A +NAMI+G+ K GR DA+++F++MP ++VSY M+ GY + G +
Sbjct: 134 ELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYT---QNGKMG 190
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
A F+ M RN VSW +M+ G V N AWELF ++P N V+ M+ GF + GK
Sbjct: 191 LAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGK 250
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
+ EA LF ++ C+++ SWN MI Y Q+ + +EA+ LF + D + + ++
Sbjct: 251 IVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETP----YKDCVSWTTMING 306
Query: 302 CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
+ LD+ R+ Y + D++ AL++ + G I ++ F Q ++ D + W
Sbjct: 307 YVRVGKLDEAREVYNQMPY----KDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICW 362
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
N++IA + Q +A + F QM + +++ +++S +AG++D + +F M
Sbjct: 363 NSMIAGYCQSGRMSEALNLFRQMPV----KNAVSWNTMISGYAQAGEMDRATEIFEAM 416
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 250/453 (55%), Gaps = 38/453 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD--- 92
++ R N I+ R G + AR+VFD+M +D W +M++ Y G +R LFD
Sbjct: 44 EMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPD 103
Query: 93 -----------------------------AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
MP++NVVSWN M+ G +N EA + F
Sbjct: 104 AQKSVIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFG 163
Query: 124 AMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
MPERN S+N +++ GR+ DA+RLF EM +VVS+T M+ G K G + A
Sbjct: 164 RMPERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSK---NGRVDAA 220
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVD 243
R +FD MP RN VSW MI G +NG ++EA +LF RMP++++ + M+TGF + G ++
Sbjct: 221 REVFDKMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLN 280
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLIFVSLFTAC 302
A LF + +++ +W M+TGY Q+G EEAL LF++M G++P FV++ AC
Sbjct: 281 RAEQLFHAMPQKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGAC 340
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF--GQTSQPDIVS 360
+ LA L +G+Q + ++ K F V +AL+ MYSKCG ++ F G + D+++
Sbjct: 341 SDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIA 400
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
WN +IAA+A H +A + F++M +G + + +T++ LL+ C AG DE F+ ++
Sbjct: 401 WNGMIAAYAHHGYGNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELL 460
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ I R +HY CL+D+ RAG+L A II
Sbjct: 461 KNRYIQVREDHYTCLIDLCGRAGRLDEALNIIE 493
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 247/450 (54%), Gaps = 38/450 (8%)
Query: 39 RANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD------ 92
R N I+ R G I AR+VFD+M +D W +M++ Y G +R LFD
Sbjct: 3 RCNYFISKLCREGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEK 62
Query: 93 --------------------------AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
MP++NVVSWN M+ G +N EA + F MP
Sbjct: 63 SVIVWTAMVSGYIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMP 122
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARAL 186
ERN S+N +++ GR+ DA+RLF EM +VVS+T M+ G K G + AR +
Sbjct: 123 ERNVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSK---NGRVDDARDV 179
Query: 187 FDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAW 246
FD MP RN VSW MI G +NG ++EA +LF RMP++++ + M+TGF + G ++ A
Sbjct: 180 FDRMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAE 239
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLIFVSLFTACASL 305
LF + +++ +W M+TGY Q+G EEAL LF++M G++P FV++ AC+ L
Sbjct: 240 KLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDL 299
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF--GQTSQPDIVSWNT 363
A L +G+Q + ++ K F V +AL+ MYSKCG ++ F G + D+++WN
Sbjct: 300 AGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNG 359
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY 423
+IAA+A H +A F++M +G + + +T++ LL+ C AG DE F+ ++ +
Sbjct: 360 MIAAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNR 419
Query: 424 GIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ R +HY CL+D+ RAG+L A II
Sbjct: 420 YMQVREDHYTCLIDLCGRAGRLDEALNIIE 449
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/299 (34%), Positives = 164/299 (54%), Gaps = 14/299 (4%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V N + A + G I A ++F++M +DVV+W +M+ +G +R +FD MP
Sbjct: 125 NVVSWNTVMTALAHCGRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDDARDVFDRMP 184
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
++NVVSWNAM+AG QN DEA F MPER+ S+N M++GFI+ G L A++LF
Sbjct: 185 IRNVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEKLFHA 244
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWT----VMINGLVEN--G 209
MP NV+++T M+ GYV + G A LF+ M + + T V + G + G
Sbjct: 245 MPKKNVITWTAMMTGYV---QHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAG 301
Query: 210 LYE--EAWELFGRMP-QKNVVASTAMITGFCKQGKVDEAWTLFQQIRC--RDIASWNIMI 264
L E + ++ + Q++ +A+I + K G A +F D+ +WN MI
Sbjct: 302 LPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMI 361
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
YA +G G EA+ LF++M G Q +D+ +V L TAC+ L D+G + + ++K+ +
Sbjct: 362 AAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRY 420
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 239/418 (57%), Gaps = 3/418 (0%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D N+ ++ + R+G + A+ VFD MP KD ++WN +L Y +G + +R LF++
Sbjct: 109 DAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESKV 168
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
++SWN ++ G V+ ML +A F MP RNA S+N MISG+ + G L A+RLF+E
Sbjct: 169 DWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEE 228
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
P +V ++T M+ YV + G + AR +FD MP + E+++ VMI G V+ + A
Sbjct: 229 SPVRDVFTWTAMVFAYV---QSGMLDEARRVFDEMPGKREMAYNVMIAGYVQYKKMDMAR 285
Query: 216 ELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEE 275
ELF MP +NV + +I+G+ + G + +A LF + RD SW +I GYAQ G E+
Sbjct: 286 ELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCVSWAAIIAGYAQTGHYEK 345
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
+++ +M R G + F + CA +A L G+Q + +K G+D+ V NAL+
Sbjct: 346 VMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLE 405
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
MY KCGSI ++ F + DI+SWNT++A +A+H +A FD M G +PD IT
Sbjct: 406 MYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGFKPDEIT 465
Query: 396 FLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ +L C G D F M DYGI P S+HY C++D++ RAG L+ A ++R
Sbjct: 466 MVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMR 523
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
N + + + G+I A VF++M KD+++WN+ML Y GF + + +FD+M
Sbjct: 400 GNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQALLVFDSMKTAGF 459
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQ 150
+ ++ ++ C + D YF +M + N+ YN MI + G L +A
Sbjct: 460 KPDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAH 519
Query: 151 RLFKEMPC-PNVVSYTVMI 168
L + MP P+ ++ ++
Sbjct: 520 NLMRNMPFEPDAATWGALL 538
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/413 (34%), Positives = 230/413 (55%), Gaps = 5/413 (1%)
Query: 42 LNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS 101
+I++F+ N T +D +V+ N ++ +Y SG + +F M + + +
Sbjct: 15 FSISSFATVTNHTKTHHAYDH-DHSNVIASNQLIASYVRSGDIDSALRVFHNMTVISTTT 73
Query: 102 WNAMV-AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN 160
WN ++ A ++ + A F +PE N SYN M++ ++ + +A+ F MP +
Sbjct: 74 WNTILGAFAKKHGNFERARQLFDKIPEPNTVSYNTMLACYLHHFGIHNARDFFDWMPVRD 133
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGR 220
S+ M+ GY +V+ + AR L AMP +N V+W+ M++G V G + A E F
Sbjct: 134 TASWNTMLSGYAQVRM---MDEARRLLVAMPEKNCVTWSAMVSGYVACGDLDAAVECFYA 190
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
P K+V+ TAMITG+ K G+V A LF ++ + + +WN MI GY NGR E L LF
Sbjct: 191 APMKSVITWTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLF 250
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
M+ TG++P+ L S+ C+ L+ L G+Q + LV K D + +L++MYSKC
Sbjct: 251 KTMLETGVKPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKC 310
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
G + DS F Q + D+V+WN +I+ +AQH KA FD+M ++PD ITF+++L
Sbjct: 311 GDLKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVL 370
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
C AG +D FN MV ++GI R EHY C+VD++ RAG+L A ++++
Sbjct: 371 LACNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRAGRLSEAVDMVK 423
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 195/372 (52%), Gaps = 43/372 (11%)
Query: 41 NLNIAAFSRA-GNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
N + AF++ GN ARQ+FDK+P + V++N+ML Y H ++R FD MP+++
Sbjct: 75 NTILGAFAKKHGNFERARQLFDKIPEPNTVSYNTMLACYLHHFGIHNARDFFDWMPVRDT 134
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF------------------- 140
SWN M++G Q M+DEA AMPE+N +++AM+SG+
Sbjct: 135 ASWNTMLSGYAQVRMMDEARRLLVAMPEKNCVTWSAMVSGYVACGDLDAAVECFYAAPMK 194
Query: 141 ------------IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV-KVKEGGGIARARALF 187
+KFGR+ A+ LF ++ +V++ MI GYV + G+ + +
Sbjct: 195 SVITWTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTML 254
Query: 188 DAMPRRNEVSWTVMINGL-----VENGLYEEAWELFGRMP-QKNVVASTAMITGFCKQGK 241
+ + N +S T ++ G ++ G ++ +L + P ++ A T++I+ + K G
Sbjct: 255 ETGVKPNALSLTSVLLGCSDLSALQTG--KQVHQLVCKSPLSRDTTAVTSLISMYSKCGD 312
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
+ ++W LF QI +D+ +WN MI+GYAQ+G GE+AL+LF +M ++ ++PD + FV++ A
Sbjct: 313 LKDSWDLFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIKPDWITFVAVLLA 372
Query: 302 CASLALLDQGRQTYALVIKH-GFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIV 359
C ++D G + + ++K G + +V + + G + ++ ++ +P
Sbjct: 373 CNHAGMVDLGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRAGRLSEAVDMVKSMPFKPHPA 432
Query: 360 SWNTIIAAFAQH 371
+ T++ A H
Sbjct: 433 IFGTLLGACRIH 444
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/512 (30%), Positives = 263/512 (51%), Gaps = 87/512 (16%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H+H + K + + N I+++++ G+I A +VFD+MP ++ +WN++L+AY
Sbjct: 41 HSHII----KTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSK 96
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMV---AGC--------VQNDML--DEAFNY----FA 123
G LFDAMP ++ VSWN+++ AGC N ML D +FN F+
Sbjct: 97 LGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFS 156
Query: 124 AM----PERNAASYNAMISGFI--------------------KFGRLCDAQRLFKEMPCP 159
+ +R I G + K G + A+++F E+P
Sbjct: 157 TLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEK 216
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG 219
NVV Y +I G ++ G + ++ LF M R+ +SWT MI G +NGL +A ++F
Sbjct: 217 NVVMYNTLIMGLMRC---GRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 273
Query: 220 RMP---------------------------------------QKNVVASTAMITGFCKQG 240
M + N+ ++A++ +CK
Sbjct: 274 EMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCK 333
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
+ A +F+++ C+++ SW M+ GY QNG EEA+ FS M + G++PDD S+ +
Sbjct: 334 NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 393
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
+CA+LA L++G Q +A + G S ++V+NALVT+Y KCGSI DS F + S D V+
Sbjct: 394 SCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVT 453
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
W +++ +AQ + F+ M+A G++PD +TF+ +LS C RAG +++ +F M+
Sbjct: 454 WTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMI 513
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+++GI P +HY C++D+ SRAG+++ A I
Sbjct: 514 NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFI 545
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 207/401 (51%), Gaps = 19/401 (4%)
Query: 25 LLVFAKHFSSYDVYRANLNIAAFSRAGNITAAR----QVFDKMPTKDVVTWNSMLTAYWH 80
+LV+ +H SS + Y A L + +R N T A+ + +P + N+++++Y
Sbjct: 8 VLVWLRHCSSSNHYCALLKLCCETR--NFTKAKNLHSHIIKTLPYPETFLLNNLISSYAK 65
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF 140
G ++ +FD MP N+ SWN +++ + + E F AMP R+ S+N++ISG+
Sbjct: 66 LGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGY 125
Query: 141 IKFGRLCDAQRLFKEMPCP------NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN 194
G + + + + M N ++++ ++ + + G + R + + +
Sbjct: 126 AGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLL---ILASKRGCVKLGRQIHGHVVKFG 182
Query: 195 EVSWTVMINGLVEN----GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQ 250
+S+ + + LV+ G+ A ++F +P+KNVV +I G + G+V+++ LF
Sbjct: 183 FMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFF 242
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
++R RD SW MITG+ QNG +A+++F +M +Q D F S+ TAC + L +
Sbjct: 243 EMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQE 302
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
G+Q +A +I+ + ++ V +ALV MY KC +I +E F + + ++VSW ++ + Q
Sbjct: 303 GKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQ 362
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ +A F M G+ PD T S++S C ++E
Sbjct: 363 NGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEE 403
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
+ +L C + + ++ +IK + + N L++ Y+K GSI + F Q
Sbjct: 21 YCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 80
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
P++ SWNTI++A+++ + FD M R DG+++ SL+S G I +S+
Sbjct: 81 HPNLYSWNTILSAYSKLGRVSEMEYLFDAM----PRRDGVSWNSLISGYAGCGLIYQSVK 136
Query: 415 LFNLMVHDYG 424
+NLM+ + G
Sbjct: 137 AYNLMLKNDG 146
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N + + + G+I + ++F+++ KD VTW ++++ Y G + LF++M +
Sbjct: 423 SNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGL 482
Query: 100 ----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA-----SYNAMISGFIKFGRLCDAQ 150
V++ +++ C + ++++ F +M + Y MI F + GR+ +A+
Sbjct: 483 KPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEAR 542
Query: 151 RLFKEMP-CPNVVSYTVMID-----GYVKVKEGGGIARARALFDAMPRRNEVSWTVMING 204
+MP P+ +S+ ++ G + + G A L + P N S+ ++ +
Sbjct: 543 NFINKMPFSPDAISWATLLSSCRFYGNMDI----GKWAAEFLMELDP-HNTASYVLLSSV 597
Query: 205 LVENGLYEEAWELFGRMPQKNV 226
G +EE L M K +
Sbjct: 598 YAAKGKWEEVARLRKDMRDKGL 619
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/512 (30%), Positives = 263/512 (51%), Gaps = 87/512 (16%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H+H + K + + N I+++++ G+I A +VFD+MP ++ +WN++L+AY
Sbjct: 41 HSHII----KTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSK 96
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMV---AGC--------VQNDML--DEAFNY----FA 123
G LFDAMP ++ VSWN+++ AGC N ML D +FN F+
Sbjct: 97 LGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFS 156
Query: 124 AM----PERNAASYNAMISGFI--------------------KFGRLCDAQRLFKEMPCP 159
+ +R I G + K G + A+++F E+P
Sbjct: 157 TLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEK 216
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG 219
NVV Y +I G ++ G + ++ LF M R+ +SWT MI G +NGL +A ++F
Sbjct: 217 NVVMYNTLIMGLMRC---GRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 273
Query: 220 RMP---------------------------------------QKNVVASTAMITGFCKQG 240
M + N+ ++A++ +CK
Sbjct: 274 EMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDYKDNIFVASALVVMYCKCK 333
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
+ A +F+++ C+++ SW M+ GY QNG EEA+ FS M + G++PDD S+ +
Sbjct: 334 NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVIS 393
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
+CA+LA L++G Q +A + G S ++V+NALVT+Y KCGSI DS F + S D V+
Sbjct: 394 SCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVT 453
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
W +++ +AQ + F+ M+A G++PD +TF+ +LS C RAG +++ +F M+
Sbjct: 454 WTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMI 513
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+++GI P +HY C++D+ SRAG+++ A I
Sbjct: 514 NEHGIVPIQDHYTCMIDLFSRAGRIEEARNFI 545
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 207/401 (51%), Gaps = 19/401 (4%)
Query: 25 LLVFAKHFSSYDVYRANLNIAAFSRAGNITAAR----QVFDKMPTKDVVTWNSMLTAYWH 80
+LV+ +H SS + Y A L + +R N T A+ + +P + N+++++Y
Sbjct: 8 VLVWLRHCSSSNHYCALLKLCCETR--NFTKAKNLHSHIIKTLPYPETFLLNNLISSYAK 65
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF 140
G ++ +FD MP N+ SWN +++ + + E F AMP R+ S+N++ISG+
Sbjct: 66 LGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGY 125
Query: 141 IKFGRLCDAQRLFKEMPCP------NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN 194
G + + + + M N ++++ ++ + + G + R + + +
Sbjct: 126 AGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLL---ILASKRGCVKLGRQIHGHVVKFG 182
Query: 195 EVSWTVMINGLVEN----GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQ 250
+S+ + + LV+ G+ A ++F +P+KNVV +I G + G+V+++ LF
Sbjct: 183 FMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFF 242
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
++R RD SW MITG+ QNG +A+++F +M +Q D F S+ TAC + L +
Sbjct: 243 EMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQE 302
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
G+Q +A +I+ + ++ V +ALV MY KC +I +E F + + ++VSW ++ + Q
Sbjct: 303 GKQVHAYIIRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQ 362
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ +A F M G+ PD T S++S C ++E
Sbjct: 363 NGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEE 403
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
+ +L C + + ++ +IK + + N L++ Y+K GSI + F Q
Sbjct: 21 YCALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMP 80
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
P++ SWNTI++A+++ + FD M R DG+++ SL+S G I +S+
Sbjct: 81 HPNLYSWNTILSAYSKLGRVSEMEYLFDAM----PRRDGVSWNSLISGYAGCGLIYQSVK 136
Query: 415 LFNLMVHDYG 424
+NLM+ + G
Sbjct: 137 AYNLMLKNDG 146
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N + + + G+I + ++F+++ KD VTW ++++ Y G + LF++M +
Sbjct: 423 SNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGL 482
Query: 100 ----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA-----SYNAMISGFIKFGRLCDAQ 150
V++ +++ C + ++++ F +M + Y MI F + GR+ +A+
Sbjct: 483 KPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEAR 542
Query: 151 RLFKEMP-CPNVVSYTVMID-----GYVKVKEGGGIARARALFDAMPRRNEVSWTVMING 204
+MP P+ +S+ ++ G + + G A L + P N S+ ++ +
Sbjct: 543 NFINKMPFSPDAISWATLLSSCRFYGNMDI----GKWAAEFLMELDP-HNTASYVLLSSV 597
Query: 205 LVENGLYEEAWELFGRMPQKNV 226
G +EE L M K +
Sbjct: 598 YAAKGKWEEVARLRKDMRDKGL 619
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 262/513 (51%), Gaps = 89/513 (17%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H+H + K + + N I+++++ G+I A +VFD+MP ++ +WN++L+AY
Sbjct: 32 HSHII----KTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSK 87
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN------ 134
G LFDAMP ++ VSWN++++G ++ ++ + M +N S N
Sbjct: 88 LGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML-KNDGSINLNRITF 146
Query: 135 ------AMISGFIKFGR--------------------LCD----------AQRLFKEMPC 158
A G +K GR L D A+++F E+P
Sbjct: 147 STLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPE 206
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
NVV Y +I G ++ G + ++ LF M R+ +SWT MI G +NGL +A ++F
Sbjct: 207 KNVVMYNTLIMGLMRC---GRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIF 263
Query: 219 GRMP---------------------------------------QKNVVASTAMITGFCKQ 239
M + N+ ++A++ +CK
Sbjct: 264 REMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKC 323
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
+ A +F+++ C+++ SW M+ GY QNG EEA+ FS M + G++PDD S+
Sbjct: 324 KNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVI 383
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
++CA+LA L++G Q +A + G S ++V+NALVT+Y KCGSI DS F + S D V
Sbjct: 384 SSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEV 443
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+W +++ +AQ + F+ M+A G++PD +TF+ +LS C RAG +++ +F M
Sbjct: 444 TWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 503
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
++++GI P +HY C++D+ SRAG+++ A I
Sbjct: 504 INEHGIVPIQDHYTCMIDLFSRAGRIEEARNFI 536
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 195/375 (52%), Gaps = 15/375 (4%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
F++A N+ + + +P + N+++++Y G ++ +FD MP N+ SWN ++
Sbjct: 25 FTKAKNLHS--HIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTIL 82
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP------N 160
+ + + E F AMP R+ S+N++ISG+ G + + + + M N
Sbjct: 83 SAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLN 142
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN----GLYEEAWE 216
++++ ++ + + G + R + + + +S+ + + LV+ G+ A +
Sbjct: 143 RITFSTLL---ILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARK 199
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+F +P+KNVV +I G + G+V+++ LF ++R RD SW MITG+ QNG +A
Sbjct: 200 VFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDA 259
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+++F +M +Q D F S+ TAC + L +G+Q +A +I+ + ++ V +ALV M
Sbjct: 260 IDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEM 319
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y KC +I +E F + + ++VSW ++ + Q+ +A F M G+ PD T
Sbjct: 320 YCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTL 379
Query: 397 LSLLSVCCRAGKIDE 411
S++S C ++E
Sbjct: 380 GSVISSCANLASLEE 394
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
+ +L C + + ++ +IK + + N L++ Y+K GSI + F Q
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMP 71
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
P++ SWNTI++A+++ + FD M R DG+++ SL+S G I +S+
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAM----PRRDGVSWNSLISGYAGCGLIYQSVK 127
Query: 415 LFNLMVHDYG 424
+NLM+ + G
Sbjct: 128 AYNLMLKNDG 137
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N + + + G+I + ++F+++ KD VTW ++++ Y G + LF++M +
Sbjct: 414 SNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGL 473
Query: 100 ----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA-----SYNAMISGFIKFGRLCDAQ 150
V++ +++ C + ++++ F +M + Y MI F + GR+ +A+
Sbjct: 474 KPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEAR 533
Query: 151 RLFKEMP-CPNVVSYTVMID-----GYVKVKEGGGIARARALFDAMPRRNEVSWTVMING 204
+MP P+ +S+ ++ G + + G A L + P N S+ ++ +
Sbjct: 534 NFINKMPFSPDAISWATLLSSCRFYGNMDI----GKWAAEFLMELDP-HNTASYVLLSSV 588
Query: 205 LVENGLYEEAWELFGRMPQKNV 226
G +EE L M K +
Sbjct: 589 YAAKGKWEEVARLRKDMRDKGL 610
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 262/513 (51%), Gaps = 89/513 (17%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H+H + K + + N I+++++ G+I A +VFD+MP ++ +WN++L+AY
Sbjct: 32 HSHII----KTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSK 87
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN------ 134
G LFDAMP ++ VSWN++++G ++ ++ + M +N S N
Sbjct: 88 LGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLML-KNDGSINLNRITF 146
Query: 135 ------AMISGFIKFGR--------------------LCD----------AQRLFKEMPC 158
A G +K GR L D A+++F E+P
Sbjct: 147 STLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPE 206
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
NVV Y +I G ++ G + ++ LF M R+ +SWT MI G +NGL +A ++F
Sbjct: 207 KNVVMYNTLIMGLMRC---GRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIF 263
Query: 219 GRMP---------------------------------------QKNVVASTAMITGFCKQ 239
M + N+ ++A++ +CK
Sbjct: 264 REMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEMYCKC 323
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
+ A +F+++ C+++ SW M+ GY QNG EEA+ FS M + G++PDD S+
Sbjct: 324 KNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVI 383
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
++CA+LA L++G Q +A + G S ++V+NALVT+Y KCGSI DS F + S D V
Sbjct: 384 SSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEV 443
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+W +++ +AQ + F+ M+A G++PD +TF+ +LS C RAG +++ +F M
Sbjct: 444 TWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESM 503
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
++++GI P +HY C++D+ SRAG+++ A I
Sbjct: 504 INEHGIVPIQDHYTCMIDLFSRAGRIEEARNFI 536
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 195/375 (52%), Gaps = 15/375 (4%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
F++A N+ + + +P + N+++++Y G ++ +FD MP N+ SWN ++
Sbjct: 25 FTKAKNLHS--HIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTIL 82
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP------N 160
+ + + E F AMP R+ S+N++ISG+ G + + + + M N
Sbjct: 83 SAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLN 142
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN----GLYEEAWE 216
++++ ++ + + G + R + + + +S+ + + LV+ G+ A +
Sbjct: 143 RITFSTLL---ILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARK 199
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+F +P+KNVV +I G + G+V+++ LF ++R RD SW MITG+ QNG +A
Sbjct: 200 VFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDA 259
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+++F +M +Q D F S+ TAC + L +G+Q +A +I+ + ++ V +ALV M
Sbjct: 260 IDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVEM 319
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y KC +I +E F + + ++VSW ++ + Q+ +A F M G+ PD T
Sbjct: 320 YCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTL 379
Query: 397 LSLLSVCCRAGKIDE 411
S++S C ++E
Sbjct: 380 GSVISSCANLASLEE 394
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
+ +L C + + ++ +IK + + N L++ Y+K GSI + F Q
Sbjct: 12 YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMP 71
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
P++ SWNTI++A+++ + FD M R DG+++ SL+S G I +S+
Sbjct: 72 HPNLYSWNTILSAYSKLGRVSEMEYLFDAM----PRRDGVSWNSLISGYAGCGLIYQSVK 127
Query: 415 LFNLMVHDYG 424
+NLM+ + G
Sbjct: 128 AYNLMLKNDG 137
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N + + + G+I + ++F+++ KD VTW ++++ Y G + LF++M +
Sbjct: 414 SNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGL 473
Query: 100 ----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA-----SYNAMISGFIKFGRLCDAQ 150
V++ +++ C + ++++ F +M + Y MI F + GR+ +A+
Sbjct: 474 KPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEAR 533
Query: 151 RLFKEMP-CPNVVSYTVMID-----GYVKVKEGGGIARARALFDAMPRRNEVSWTVMING 204
+MP P+ +S+ ++ G + + G A L + P N S+ ++ +
Sbjct: 534 NFINKMPFSPDAISWATLLSSCRFYGNMDI----GKWAAEFLMELDP-HNTASYVLLSSV 588
Query: 205 LVENGLYEEAWELFGRMPQKNV 226
G +EE L M K +
Sbjct: 589 YAAKGKWEEVARLRKDMRDKGL 610
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 249/471 (52%), Gaps = 58/471 (12%)
Query: 36 DVYRANLNIAA-FSRAGN--ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
D+ NL I+ FS G+ + R++FD MP +D V+WN++++ Y +G + +F+
Sbjct: 99 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 158
Query: 93 AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC----- 147
+MP +NVVS NA+V G + N +D A +F M ER++AS + ++SG ++ G+L
Sbjct: 159 SMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEI 218
Query: 148 --------------------------------DAQRLF-------------KEMPCPNVV 162
+A+ +F K NVV
Sbjct: 219 LVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVV 278
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP 222
S+ M+ YVK G + AR LFD M R+ SW +I G V+ G EEA +LF MP
Sbjct: 279 SWNSMMMCYVK---AGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMP 335
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+V++ ++I+GF + G + F+ + +++ SWN +I GY +N + A+ LFSQ
Sbjct: 336 IPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQ 395
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M G +PD S+ + L L G+Q + V K DL +NN+L+TMYS+CG
Sbjct: 396 MQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVV-PDLPINNSLITMYSRCGE 454
Query: 343 IVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
I D+ F + D+++WN +I +A H +A F++M + ++P ITF+S+L+
Sbjct: 455 IGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLN 514
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C AG ++E FN M++DYGI PR EH+A LVD++ R GQLQ A ++I
Sbjct: 515 ACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLI 565
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 174/341 (51%), Gaps = 16/341 (4%)
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
D +P +++ N ++ ++ L A F + RN ++N+MI+G+++ + A++
Sbjct: 32 DTIP-QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQ 90
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
LF EMP ++VS+ ++I GY + + R LFD MP+R+ VSW +I+G +NG
Sbjct: 91 LFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRM 150
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
++A E+F MP++NVV+ A++ GF G VD A F+++ RD AS + +++G +NG
Sbjct: 151 DQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFV--SLFTACASLALLDQGRQTYALVI---------K 320
+ + A + + G + DDL++ +L ++++ R + V+ K
Sbjct: 211 KLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGK 270
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
++ N+++ Y K G +V + F + + D SWNT+I + Q +A
Sbjct: 271 RRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKL 330
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
F +M PD +++ S++S + G + F M H
Sbjct: 331 FLEMPI----PDVLSWNSIISGFSQIGDLKRVKEFFENMPH 367
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 249/471 (52%), Gaps = 58/471 (12%)
Query: 36 DVYRANLNIAA-FSRAGN--ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
D+ NL I+ FS G+ + R++FD MP +D V+WN++++ Y +G + +F+
Sbjct: 99 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 158
Query: 93 AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC----- 147
+MP +NVVS NA+V G + N +D A +F M ER++AS + ++SG ++ G+L
Sbjct: 159 SMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEI 218
Query: 148 --------------------------------DAQRLF-------------KEMPCPNVV 162
+A+ +F K NVV
Sbjct: 219 LVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVV 278
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP 222
S+ M+ YVK G + AR LFD M R+ SW +I G V+ G EEA +LF MP
Sbjct: 279 SWNSMMMCYVK---AGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMP 335
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+V++ ++I+GF + G + F+ + +++ SWN +I GY +N + A+ LFSQ
Sbjct: 336 IPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQ 395
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M G +PD S+ + L L G+Q + V K DL +NN+L+TMYS+CG
Sbjct: 396 MQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVV-PDLPINNSLITMYSRCGE 454
Query: 343 IVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
I D+ F + D+++WN +I +A H +A F++M + ++P ITF+S+L+
Sbjct: 455 IGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLN 514
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C AG ++E FN M++DYGI PR EH+A LVD++ R GQLQ A ++I
Sbjct: 515 ACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLI 565
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 174/341 (51%), Gaps = 16/341 (4%)
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
D +P +++ N ++ ++ L A F + RN ++N+MI+G+++ + A++
Sbjct: 32 DTIP-QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQ 90
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
LF EMP ++VS+ ++I GY + + R LFD MP+R+ VSW +I+G +NG
Sbjct: 91 LFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRM 150
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
++A E+F MP++NVV+ A++ GF G VD A F+++ RD AS + +++G +NG
Sbjct: 151 DQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFV--SLFTACASLALLDQGRQTYALVI---------K 320
+ + A + + G + DDL++ +L ++++ R + V+ K
Sbjct: 211 KLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGK 270
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
++ N+++ Y K G +V + F + + D SWNT+I + Q +A
Sbjct: 271 RRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKL 330
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
F +M PD +++ S++S + G + F M H
Sbjct: 331 FLEMPI----PDVLSWNSIISGFSQIGDLKRVKEFFENMPH 367
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 249/471 (52%), Gaps = 58/471 (12%)
Query: 36 DVYRANLNIAA-FSRAGN--ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
D+ NL I+ FS G+ + R++FD MP +D V+WN++++ Y +G + +F+
Sbjct: 99 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 158
Query: 93 AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC----- 147
+MP +NVVS NA+V G + N +D A +F M ER++AS + ++SG ++ G+L
Sbjct: 159 SMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEI 218
Query: 148 --------------------------------DAQRLF-------------KEMPCPNVV 162
+A+ +F K NVV
Sbjct: 219 LVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVV 278
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP 222
S+ M+ YVK G + AR LFD M R+ SW +I G V+ G EEA +LF MP
Sbjct: 279 SWNSMMMCYVK---AGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMP 335
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+V++ ++I+GF + G + F+ + +++ SWN +I GY +N + A+ LFSQ
Sbjct: 336 IPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQ 395
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M G +PD S+ + L L G+Q + V K DL +NN+L+TMYS+CG
Sbjct: 396 MQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVV-PDLPINNSLITMYSRCGE 454
Query: 343 IVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
I D+ F + D+++WN +I +A H +A F++M + ++P ITF+S+L+
Sbjct: 455 IGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLN 514
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C AG ++E FN M++DYGI PR EH+A LVD++ R GQLQ A ++I
Sbjct: 515 ACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLI 565
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 174/341 (51%), Gaps = 16/341 (4%)
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
D +P +++ N ++ ++ L A F + RN ++N+MI+G+++ + A++
Sbjct: 32 DTIP-QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQ 90
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
LF EMP ++VS+ ++I GY + + R LFD MP+R+ VSW +I+G +NG
Sbjct: 91 LFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRM 150
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
++A E+F MP++NVV+ A++ GF G VD A F+++ RD AS + +++G +NG
Sbjct: 151 DQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFV--SLFTACASLALLDQGRQTYALVI---------K 320
+ + A + + G + DDL++ +L ++++ R + V+ K
Sbjct: 211 KLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGK 270
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
++ N+++ Y K G +V + F + + D SWNT+I + Q +A
Sbjct: 271 RRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKL 330
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
F +M PD +++ S++S + G + F M H
Sbjct: 331 FLEMPI----PDVLSWNSIISGFSQIGDLKRVKEFFENMPH 367
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 249/471 (52%), Gaps = 58/471 (12%)
Query: 36 DVYRANLNIAA-FSRAGN--ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
D+ NL I+ FS G+ + R++FD MP +D V+WN++++ Y +G + +F+
Sbjct: 99 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 158
Query: 93 AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC----- 147
+MP +NVVS NA+V G + N +D A +F M ER++AS + ++SG ++ G+L
Sbjct: 159 SMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEI 218
Query: 148 --------------------------------DAQRLF-------------KEMPCPNVV 162
+A+ +F K NVV
Sbjct: 219 LVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVV 278
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP 222
S+ M+ YVK G + AR LFD M R+ SW +I G V+ G EEA +LF MP
Sbjct: 279 SWNSMMMCYVK---AGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMP 335
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+V++ ++I+GF + G + F+ + +++ SWN +I GY +N + A+ LFSQ
Sbjct: 336 IPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQ 395
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M G +PD S+ + L L G+Q + V K DL +NN+L+TMYS+CG
Sbjct: 396 MQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVV-PDLPINNSLITMYSRCGE 454
Query: 343 IVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
I D+ F + D+++WN +I +A H +A F++M + ++P ITF+S+L+
Sbjct: 455 IGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLN 514
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C AG ++E FN M++DYGI PR EH+A LVD++ R GQLQ A ++I
Sbjct: 515 ACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLI 565
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 174/341 (51%), Gaps = 16/341 (4%)
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
D +P +++ N ++ ++ L A F + RN ++N+MI+G+++ + A++
Sbjct: 32 DTIP-QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQ 90
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
LF EMP ++VS+ ++I GY + + R LFD MP+R+ VSW +I+G +NG
Sbjct: 91 LFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRM 150
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
++A E+F MP++NVV+ A++ GF G VD A F+++ RD AS + +++G +NG
Sbjct: 151 DQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNG 210
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFV--SLFTACASLALLDQGRQTYALVI---------K 320
+ + A + + G + DDL++ +L ++++ R + V+ K
Sbjct: 211 KLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGK 270
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
++ N+++ Y K G +V + F + + D SWNT+I + Q +A
Sbjct: 271 RRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKL 330
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
F +M PD +++ S++S + G + F M H
Sbjct: 331 FLEMPI----PDVLSWNSIISGFSQIGDLKRVKEFFENMPH 367
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/471 (33%), Positives = 249/471 (52%), Gaps = 58/471 (12%)
Query: 36 DVYRANLNIAA-FSRAGN--ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
D+ NL I+ FS G+ + R++FD MP +D V+WN++++ Y +G + +F+
Sbjct: 25 DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 84
Query: 93 AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC----- 147
+MP +NVVS NA+V G + N +D A +F M ER++AS + ++SG ++ G+L
Sbjct: 85 SMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLVRNGKLDMAAEI 144
Query: 148 --------------------------------DAQRLF-------------KEMPCPNVV 162
+A+ +F K NVV
Sbjct: 145 LVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVV 204
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP 222
S+ M+ YVK G + AR LFD M R+ SW +I G V+ G EEA +LF MP
Sbjct: 205 SWNSMMMCYVKA---GDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMP 261
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+V++ ++I+GF + G + F+ + +++ SWN +I GY +N + A+ LFSQ
Sbjct: 262 IPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQ 321
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M G +PD S+ + L L G+Q + V K DL +NN+L+TMYS+CG
Sbjct: 322 MQLKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVV-PDLPINNSLITMYSRCGE 380
Query: 343 IVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
I D+ F + D+++WN +I +A H +A F++M + ++P ITF+S+L+
Sbjct: 381 IGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQPTYITFISVLN 440
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C AG ++E FN M++DYGI PR EH+A LVD++ R GQLQ A ++I
Sbjct: 441 ACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAMDLI 491
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 153/297 (51%), Gaps = 15/297 (5%)
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
MI+G+++ + A++LF EMP ++VS+ ++I GY + + R LFD MP+R+
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDC 60
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
VSW +I+G +NG ++A E+F MP++NVV+ A++ GF G VD A F+++ R
Sbjct: 61 VSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGER 120
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV--SLFTACASLALLDQGRQ 313
D AS + +++G +NG+ + A + + G + DDL++ +L ++++ R
Sbjct: 121 DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARH 180
Query: 314 TYALVI---------KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
+ V+ K ++ N+++ Y K G +V + F + + D SWNT+
Sbjct: 181 VFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTV 240
Query: 365 IAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
I + Q +A F +M PD +++ S++S + G + F M H
Sbjct: 241 IGGYVQIGDMEEASKLFLEMPI----PDVLSWNSIISGFSQIGDLKRVKEFFENMPH 293
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 113/249 (45%), Gaps = 25/249 (10%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV N I+ FS+ G++ ++ F+ MP K++++WNS++ Y + + + LF M
Sbjct: 264 DVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQ 323
Query: 96 MKN-------VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCD 148
+K + S ++ G V + + + + N++I+ + + G + D
Sbjct: 324 LKGERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGD 383
Query: 149 AQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMIN 203
A+ +F EM +V+++ MI GY G A+A LF+ M + +++ ++N
Sbjct: 384 ARHVFNEMKLYKDVITWNAMIGGYAF---HGFAAQALELFERMKGLKIQPTYITFISVLN 440
Query: 204 GLVENGLYEEAWELFGRM-------PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR- 255
GL EE F M P+ AS I G +QG++ EA L + +
Sbjct: 441 ACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILG--RQGQLQEAMDLIVNMPVKP 498
Query: 256 DIASWNIMI 264
D A W ++
Sbjct: 499 DKAVWGALL 507
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 252/465 (54%), Gaps = 46/465 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V N + R G++ AR+VFD P K+VV+WN+M+ Y +G ++ LFD +
Sbjct: 164 NVVSWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIE 223
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
+NV++W +M++G + ++EAF F MPE+N S+ AMI GF G +A LF +
Sbjct: 224 CRNVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLD 283
Query: 156 M-------------------------PCPNVVSYTVMIDGYVKVKE-----GGGIAR--- 182
M PC + MI K+ + G + R
Sbjct: 284 MMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYS 343
Query: 183 -------ARALFDA-MPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMIT 234
AR++F+ M ++ S+ MING V+ G +A ELF +P +N +A T MI+
Sbjct: 344 VCGLMDSARSVFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMIS 403
Query: 235 GFCKQGKVDEAWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
G+ G+V +A LF + +D +W +MI GY QN EA+NLF++M+ G P +
Sbjct: 404 GYLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPIN 463
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIK--HGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
+ LF A S+A LD G Q +A+ +K + ++ D+ + N+L++MY+KCG I D+ F
Sbjct: 464 STYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIF 523
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
+ D +SWN++I + H +A + ++ M+ GV PD +TFL +L+ C AG +D
Sbjct: 524 SNMNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVD 583
Query: 411 ESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACE-IIRL 454
+ LF++M++DY + P EHY +++++ RAG+++ A E ++RL
Sbjct: 584 KGCELFSVMLNDYALQPGLEHYVSIINILGRAGRVKDAEEFVLRL 628
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 233/421 (55%), Gaps = 32/421 (7%)
Query: 8 SIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKD 67
S +LKP +HF L + S Y N G + AR + P+ +
Sbjct: 24 SFSLKP-------RSHFPLHYECDESQLLHYLTN---------GFLHEARTILHSFPSGN 67
Query: 68 ----VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
VV W SMLT Y G+ + +R LFD MP +N+V++NAM++ +Q+ M +A +F
Sbjct: 68 IHSRVVHWTSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFD 127
Query: 124 AMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
MPERN S+ AM+SG+ G + DA+++F EMP NVVS+ M+ G ++ G + A
Sbjct: 128 DMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIR---NGDLEEA 184
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVD 243
R +FD P +N VSW MI G VENG ++A +LF ++ +NV+ T+MI+G+C+ G V+
Sbjct: 185 RKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVITWTSMISGYCRVGDVN 244
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF-SQMVRTGMQPDDLIFVSLFTAC 302
EA+ LFQ + +++ SW MI G+A NG EAL LF M + +P++ FVSL AC
Sbjct: 245 EAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYAC 304
Query: 303 ASLALLDQGRQTYALVIKHGF---DSDLSVNNALVTMYSKCGSIVDSELAF-GQTSQPDI 358
A + G+Q +A +I + + D D + +LV MYS CG + + F G D
Sbjct: 305 AGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDD 364
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
S+N++I + Q +KA+ FD V +R + I + ++S AG++ ++ NLF+
Sbjct: 365 QSFNSMINGYVQAGQLHKAQELFD---TVPIR-NKIAWTCMISGYLSAGQVLKASNLFDD 420
Query: 419 M 419
M
Sbjct: 421 M 421
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 208/431 (48%), Gaps = 35/431 (8%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N ++A+ ++G A++ FD MP ++VV+W +ML+ Y G+ +R +FD MP +NVV
Sbjct: 107 NAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLSGYAGLGWIDDARKVFDEMPERNVV 166
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN 160
SWN+MV G ++N L+EA F P++N S+NAMI G+++ GR+ DA+ LF ++ C N
Sbjct: 167 SWNSMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRN 226
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGR 220
V+++T MI GY +V G + A LF MP +N VSWT MI G NG Y EA LF
Sbjct: 227 VITWTSMISGYCRV---GDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLD 283
Query: 221 M-------PQKNVVASTAMIT---GFCKQGKVDEAWTLFQQIRCRDIAS--WNIMITGYA 268
M P + S GF GK A + + + D ++ Y+
Sbjct: 284 MMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYS 343
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV-IKHGFDSDL 327
G + A ++F ++ DD F S+ L + ++ + V I++
Sbjct: 344 VCGLMDSARSVFEGDMKN---CDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKI---- 396
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQ--TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI 385
+++ Y G ++ + F S D ++W +I + Q+ L +A + F +M+
Sbjct: 397 -AWTCMISGYLSAGQVLKASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMM 455
Query: 386 AVGVRPDGITFLSLLSVCCRAGKID-----ESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
A G P T+ L +D +M L + ++Y + + L+ + +
Sbjct: 456 AQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENS----LISMYA 511
Query: 441 RAGQLQRACEI 451
+ G+++ A I
Sbjct: 512 KCGEIEDAYRI 522
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQH 86
VF + D N I + +AG + A+++FD +P ++ + W M++ Y +G
Sbjct: 354 VFEGDMKNCDDQSFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLK 413
Query: 87 SRALFDAMP--MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN---AMISGFI 141
+ LFD MP K+ ++W M+ G VQN+++ EA N FA M + A+ N A++ G +
Sbjct: 414 ASNLFDDMPDSDKDSIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAV 473
Query: 142 KFGRLCDAQRLFKEMPCPNVVSYTV-------MIDGYVKVKEGGGIARARALFDAMPRRN 194
D M + Y +I Y K G I A +F M R+
Sbjct: 474 GSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKC---GEIEDAYRIFSNMNCRD 530
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQ 250
++SW MI GL ++G EA ++ M + V V ++T G VD+ LF
Sbjct: 531 KISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELF- 589
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
++M+ YA E +++ + + R G D FV
Sbjct: 590 ----------SVMLNDYALQPGLEHYVSIINILGRAGRVKDAEEFV 625
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 10/162 (6%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
YDVY N I+ +++ G I A ++F M +D ++WNSM+ G + +++
Sbjct: 497 EYDVYLENSLISMYAKCGEIEDAYRIFSNMNCRDKISWNSMIMGLSDHGRANEALNMYET 556
Query: 94 M----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNA-----ASYNAMISGFIKFG 144
M + V++ ++ C +D+ F+ M A Y ++I+ + G
Sbjct: 557 MLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHYVSIINILGRAG 616
Query: 145 RLCDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARA 185
R+ DA+ +P PN + +I K IAR A
Sbjct: 617 RVKDAEEFVLRLPVEPNHTIWGALIGVCGLSKTDADIARRAA 658
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 227/452 (50%), Gaps = 65/452 (14%)
Query: 60 FDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAF 119
FD + WNS+L+ Y G +++ +FD MP+++ VSWN M++G ++N D +F
Sbjct: 69 FDGSQRNALFIWNSLLSMYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSF 128
Query: 120 NYFAAMPERN-------AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV 172
+F M E N A+ M+SG CD RL ++ V + G+
Sbjct: 129 KFFKQMTESNRVCCRFDKATLTTMLSG-------CDGLRLGISTSVTQMIHGLVFVGGFE 181
Query: 173 KVKEGGG-----------IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM 221
+ G ++ R +FD M RN V+WT +I+GL +N YE++ LF +M
Sbjct: 182 REITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQM 241
Query: 222 P----------------------------------------QKNVVASTAMITGFCKQGK 241
Q ++ +A++ + K G
Sbjct: 242 RCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGS 301
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
+D AW +F+ D S +++ +AQNG EEA+ +F++MV GM+ D + ++
Sbjct: 302 LDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGV 361
Query: 302 CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
L G+Q ++L+IK F + V N LV MYSKCG + DS L F Q +Q + VSW
Sbjct: 362 FGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSW 421
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
N++IAAFA+H +KA ++++M GV P +TFLSLL C AG +++ M L M +
Sbjct: 422 NSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTN 481
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
D+GI PRSEHYAC+VD++ RAG L A + I
Sbjct: 482 DHGISPRSEHYACVVDMLGRAGHLNEAKKFIE 513
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 161/396 (40%), Gaps = 85/396 (21%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
LVF F ++ N I ++ + + R+VFD+M ++VVTW
Sbjct: 174 LVFVGGFER-EITVGNALITSYFKCECFSQGRKVFDEMIERNVVTW-------------- 218
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGF 140
A+++G QN+ +++ FA M N +Y + +
Sbjct: 219 -----------------TAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMAC 261
Query: 141 IKFGRLCDAQR----LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
L D Q+ L+K ++ + ++D Y K G + A +F++ + V
Sbjct: 262 SGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKC---GSLDAAWQIFESAEELDGV 318
Query: 197 SWTVMINGLVENGLYEEAWELFGRM------PQKNVVASTAMITG--------------- 235
S TV++ +NG EEA ++F +M N+V++ + G
Sbjct: 319 SLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLI 378
Query: 236 ----FC--------------KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
FC K G + ++ +F Q+ ++ SWN +I +A++G G +AL
Sbjct: 379 IKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKAL 438
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTM 336
+ +M G+ P D+ F+SL AC+ L+++G + ++ HG +V M
Sbjct: 439 QFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDM 498
Query: 337 YSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ G + ++ + G ++ W ++ A + H
Sbjct: 499 LGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIH 534
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 208/352 (59%), Gaps = 6/352 (1%)
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS 163
A+VA + ++ +A F MPERN ++NAMI G+++ G A F+EMP VS
Sbjct: 91 AIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVS 150
Query: 164 YTVMIDGYVKVKEGGGIARARALFDAMPR--RNEVSWTVMINGLVENGLYEEAWELFGRM 221
++ MI G+ + G AR FD +P ++ V WTVM++G + G E+A E+F M
Sbjct: 151 WSQMIGGFAR---NGDTLTARKFFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELM 207
Query: 222 PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
P++N ++M+ G+CK+G V EA +F++I R++ WN MI GY QNG GE+AL F
Sbjct: 208 PERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFG 267
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+M G +PD+ VS+ +ACA L LD G+Q + ++ G + V + L+ MY+KCG
Sbjct: 268 EMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCG 327
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+V++ L F ++ ++ WN +IA FA + + Y D+M +R D +TF+++LS
Sbjct: 328 DLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITVLS 387
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
C G + E++ + + M +YGI HY C+VD++ RAG+L+ A E+I+
Sbjct: 388 ACAHGGLMSEALEVISKM-EEYGIEMGIRHYGCMVDLLGRAGKLKEAYELIK 438
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 179/384 (46%), Gaps = 45/384 (11%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
K S DV+ +AA+++ G + AR+VFD MP ++VVTWN+M+ Y +G + +
Sbjct: 79 KAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALL 138
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE--RNAASYNAMISGFIKFGRLC 147
F+ MP K VSW+ M+ G +N A +F +P ++ + M+ G+ K G +
Sbjct: 139 AFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMVDGYAKKGEME 198
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
DA+ +F+ MP N ++ M+ GY K G + A A+F +P RN W MI G V+
Sbjct: 199 DAREVFELMPERNYFVWSSMVCGYCK---KGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQ 255
Query: 208 NGLYEEAWELFGRM------PQKNVVAS-------------------------------- 229
NG E+A E FG M P + V S
Sbjct: 256 NGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFV 315
Query: 230 -TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+ +I + K G + A +F+ R++ WN MI G+A NG+ E L +M + +
Sbjct: 316 LSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNI 375
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-E 347
+ D + F+++ +ACA L+ + + + + ++G + + +V + + G + ++ E
Sbjct: 376 RLDAVTFITVLSACAHGGLMSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGKLKEAYE 435
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQH 371
L +P+ +I A H
Sbjct: 436 LIKRMPMKPNETVLGAMIGACWIH 459
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 122/250 (48%), Gaps = 7/250 (2%)
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
T ++ + G+ +A ++F MP++NVV AMI G+ + G A F+++ +
Sbjct: 90 TAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRV 149
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SW+ MI G+A+NG A F ++ D +I+ + A ++ R+ + L+
Sbjct: 150 SWSQMIGGFARNGDTLTARKFFDKVPYE--LKDVVIWTVMVDGYAKKGEMEDAREVFELM 207
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+ + V +++V Y K G ++++E F + ++ WN++IA + Q+ KA
Sbjct: 208 PERNY----FVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKAL 263
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F +M G PD T +S+LS C + G +D + + M+ GI + L+D+
Sbjct: 264 EAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHH-MIECKGIAVNQFVLSGLIDM 322
Query: 439 MSRAGQLQRA 448
++ G L A
Sbjct: 323 YAKCGDLVNA 332
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 8/181 (4%)
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
+ AL L+ Q R D + L AC S L + +A IK G D D+ + A+
Sbjct: 34 KRALVLYKQ-TRHDTTHDPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAI 92
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
V Y+KCG + D+ F + ++V+WN +I + ++ A F++M
Sbjct: 93 VAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNGDAKSALLAFEEMPG----KTR 148
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+++ ++ R G + F+ + ++ + +VD ++ G+++ A E+
Sbjct: 149 VSWSQMIGGFARNGDTLTARKFFDKVPYEL---KDVVIWTVMVDGYAKKGEMEDAREVFE 205
Query: 454 L 454
L
Sbjct: 206 L 206
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 223/419 (53%), Gaps = 12/419 (2%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNV 99
I SR I AR++FDK+P + TWN+M Y +G + + LF + M N
Sbjct: 51 ITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNC 110
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKE 155
++ ++ C + + + E + N+ ++I + K G + DA ++F E
Sbjct: 111 FTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGE 170
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
M NVV +T +I+GY+ G + R LFD P R+ V W+V+I+G +E+ A
Sbjct: 171 MHERNVVVWTAIINGYILC---GDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAAR 227
Query: 216 ELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEE 275
ELF +MP ++ ++ AM+ G+ G+V+ +F ++ R++ SWN +I GY +NG E
Sbjct: 228 ELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSE 287
Query: 276 ALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
L F +M+ G + P+D V++ +AC+ L LD G+ + G+ +L V N L+
Sbjct: 288 TLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLI 347
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
MY+KCG I ++ + F + DI+SWNTII A H A FD+M + G PDG+
Sbjct: 348 DMYAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGV 407
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
TF+ +LS C G + + F MV Y I P+ EHY C+VD++ RAG L +A IR
Sbjct: 408 TFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIR 466
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 171/353 (48%), Gaps = 20/353 (5%)
Query: 29 AKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSR 88
KH + + A I +S+ G + A +VF +M ++VV W +++ Y G R
Sbjct: 137 TKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGR 196
Query: 89 ALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCD 148
LFD P ++VV W+ +++G +++ + A F MP R+ S+NAM++G+ G +
Sbjct: 197 RLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEM 256
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA-----RALFDAMPRRNEVSWTVMIN 203
+++F EMP NV S+ +I GYVK G + R L + N+ + +++
Sbjct: 257 FEKVFDEMPERNVFSWNGLIGGYVK---NGLFSETLESFKRMLVEGHVIPNDFTLVAVLS 313
Query: 204 -----GLVENGLYEEAW-ELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
G ++ G + + E G + N+ +I + K G ++ A +F + +DI
Sbjct: 314 ACSRLGALDMGKWVHVYAESIGY--KGNLFVGNVLIDMYAKCGVIENAVVVFNCLDRKDI 371
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SWN +I G A +G +AL +F +M G +PD + FV + +AC + L+ G +
Sbjct: 372 ISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKS 431
Query: 318 VIKH-GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS--QPDIVSWNTIIAA 367
++ H + +V + + G ++D L F + +PD V W ++ A
Sbjct: 432 MVDHYSIVPQIEHYGCMVDLLGRAG-LLDQALNFIRKMPIEPDAVIWAALLGA 483
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+ N + IT + ++ A LF +I + A+WN M GY QNG + + LF +
Sbjct: 41 EHNDFVAPNFITTCSRFKRIHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGE 100
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
+ R P+ F + +C L + +G + + KHGF S+ V +L+ MYSK G
Sbjct: 101 LNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGC 160
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
+ D+ FG+ + ++V W II + R FD
Sbjct: 161 VEDAYKVFGEMHERNVVVWTAIINGYILCGDVVSGRRLFD 200
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 246/432 (56%), Gaps = 28/432 (6%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKM--PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK 97
+N I + + G + A +VF+ + +DVV+W++++ G ++R LFD MP +
Sbjct: 160 SNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPER 219
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGRLCDA--- 149
NVVSW+AM+ G ++ + + F F M E N+ + MI G GR+ +
Sbjct: 220 NVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQI 279
Query: 150 ----QRLFKEMPCPNVVSYTVM----IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
RL E +V+S T++ + GY + A+ +F M ++ V+W +
Sbjct: 280 HGLVSRLGFEFG--SVLSNTIITMYSLFGYTDM--------AKKVFSGMGNKDLVTWNSL 329
Query: 202 INGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
I+G + N + A+E+F RMP+K++++ TAMI GF G++ +A LF ++ +D W
Sbjct: 330 ISGYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFATDGRIGKAVELFDTLKEKDDFVWT 389
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
++I+G+ N EEAL+ F +M R +P+ L S+ +A ASL L++G Q ++ V+K
Sbjct: 390 VLISGFVSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQIHSHVLKM 449
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
+ DLS+ N+L++ Y+KCG++ D+ F +P++VS+N++I FAQ+ +A S +
Sbjct: 450 NLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNGFGEEALSMY 509
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
+M + P+ +TFL++LS C AG I+E NLFN M YGI P ++HYAC+VD++ R
Sbjct: 510 KRMQNESLEPNRVTFLAVLSACTHAGLIEEGWNLFNTMKSRYGIEPEADHYACMVDLLGR 569
Query: 442 AGQLQRACEIIR 453
AG L A +R
Sbjct: 570 AGLLDEAIHFVR 581
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 188/358 (52%), Gaps = 17/358 (4%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
+ N+ I+ R GN+ AA +F++M K++VTW +MLT Y +G +R LFD MP
Sbjct: 30 ITECNVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPE 89
Query: 97 KNVVSWNAMVAGCVQNDM-LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
+ ++NAM++G ++N + +A+ F + +RN SY AMI G +K + A++L++E
Sbjct: 90 RTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKARKFDLAEKLYRE 149
Query: 156 MPCP--NVVSYTVMIDGYVKVKEGGGIARARALFD--AMPRRNEVSWTVMINGLVENGLY 211
P + V +I+GY+K+ G + A +F+ + +R+ VSW+ ++ GL +G
Sbjct: 150 APHEFRDPVCSNALINGYLKI---GEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRI 206
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN-----IMITG 266
+ A LF RMP++NVV+ +AMI G+ ++G + + LF +R + N IMI G
Sbjct: 207 DNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKG 266
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
GR +E + + + R G + ++ ++ T + D ++ ++ + + D
Sbjct: 267 CGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGM----GNKD 322
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
L N+L++ Y + + F + + D++SW +I FA KA FD +
Sbjct: 323 LVTWNSLISGYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFATDGRIGKAVELFDTL 380
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 182/361 (50%), Gaps = 13/361 (3%)
Query: 65 TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAA 124
+K + N ++ +G + +F+ M KN+V+W AM+ QN + A F
Sbjct: 27 SKFITECNVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDE 86
Query: 125 MPERNAASYNAMISGFIKFG-RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
MPER A+YNAMISG+I+ G + A LF N VSY MI G VK ++ A
Sbjct: 87 MPERTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKARK---FDLA 143
Query: 184 RALFDAMPR--RNEVSWTVMINGLVENGLYEEAWELFGR--MPQKNVVASTAMITGFCKQ 239
L+ P R+ V +ING ++ G EA +F + +++VV+ +A++ G C+
Sbjct: 144 EKLYREAPHEFRDPVCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRD 203
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSL 298
G++D A LF ++ R++ SW+ MI GY + G E LF M R G ++ + +
Sbjct: 204 GRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIM 263
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDI 358
C + + +G Q + LV + GF+ ++N ++TMYS G ++ F D+
Sbjct: 264 IKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDL 323
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
V+WN++I+ + + A F++M D I++ +++ G+I +++ LF+
Sbjct: 324 VTWNSLISGYIYNNEVDAAYEVFERM----PEKDLISWTAMIRGFATDGRIGKAVELFDT 379
Query: 419 M 419
+
Sbjct: 380 L 380
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 192/421 (45%), Gaps = 86/421 (20%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
S DV + + R G I AR +FD+MP ++VV+W++M+ Y G ++ LF
Sbjct: 186 SKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFL 245
Query: 93 AMPMKNVVSWNA-----MVAGC--------------------------VQNDML------ 115
M + VV N+ M+ GC + N ++
Sbjct: 246 DMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLF 305
Query: 116 ---DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV 172
D A F+ M ++ ++N++ISG+I + A +F+ MP +++S+T MI G+
Sbjct: 306 GYTDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFA 365
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK-------- 224
G I +A LFD + +++ WTV+I+G V N YEEA F RM ++
Sbjct: 366 T---DGRIGKAVELFDTLKEKDDFVWTVLISGFVSNEEYEEALHWFVRMSREQCRPNPLT 422
Query: 225 -------------------------------NVVASTAMITGFCKQGKVDEAWTLFQQIR 253
++ ++I+ + K G V +A+ +F +
Sbjct: 423 ISSVLSASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVV 482
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
++ S+N +I G+AQNG GEEAL+++ +M ++P+ + F+++ +AC L+++G
Sbjct: 483 EPNVVSYNSVINGFAQNGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGWN 542
Query: 314 TY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS--QPDIVSWNTIIAAFAQ 370
+ + ++G + + +V + + G ++D + F ++ +P W ++AA
Sbjct: 543 LFNTMKSRYGIEPEADHYACMVDLLGRAG-LLDEAIHFVRSMPLEPHSGVWGALLAASCA 601
Query: 371 H 371
H
Sbjct: 602 H 602
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/352 (36%), Positives = 208/352 (59%), Gaps = 6/352 (1%)
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS 163
A+VA + ++ +A F M ERN ++NAMI G+++ G A F+EMP VS
Sbjct: 91 AIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRVS 150
Query: 164 YTVMIDGYVKVKEGGGIARARALFDAMPR--RNEVSWTVMINGLVENGLYEEAWELFGRM 221
++ MI G+ + G AR FD +P ++ V WT+M++G + G E+A E+F M
Sbjct: 151 WSQMIGGFAR---NGDTLTARKFFDKVPYELKDVVIWTMMVDGYAKKGEMEDAREVFELM 207
Query: 222 PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
P++N ++M+ G+CK+G V EA +F++I R++ WN MI GY QNG GE+AL F
Sbjct: 208 PERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFG 267
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+M G +PD+ VS+ +ACA L LD G+Q + ++ G + V + L+ MY+KCG
Sbjct: 268 EMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCG 327
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+V++ L F ++ ++ WN +IA FA + + Y D+M +RPD +TF+++LS
Sbjct: 328 DLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNIRPDAVTFITVLS 387
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
C G + E++ + + M +YGI HY C+VD++ RAG+L+ A E+I+
Sbjct: 388 ACAHGGLVSEALEVISKM-EEYGIEMGIRHYGCMVDLLGRAGRLKEAYELIK 438
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 178/384 (46%), Gaps = 45/384 (11%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
K S DV+ +AA+++ G + AR+VFD M ++ VTWN+M+ Y +G + +
Sbjct: 79 KAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALL 138
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE--RNAASYNAMISGFIKFGRLC 147
F+ MP K VSW+ M+ G +N A +F +P ++ + M+ G+ K G +
Sbjct: 139 AFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTMMVDGYAKKGEME 198
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
DA+ +F+ MP N ++ M+ GY K G + A A+F +P RN W MI G V+
Sbjct: 199 DAREVFELMPERNYFVWSSMVCGYCK---KGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQ 255
Query: 208 NGLYEEAWELFGRM------PQKNVVAS-------------------------------- 229
NG E+A E FG M P + V S
Sbjct: 256 NGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFV 315
Query: 230 -TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+ +I + K G + A +F+ R++ WN MI G+A NG+ E L +M + +
Sbjct: 316 LSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMEESNI 375
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-E 347
+PD + F+++ +ACA L+ + + + + ++G + + +V + + G + ++ E
Sbjct: 376 RPDAVTFITVLSACAHGGLVSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGRLKEAYE 435
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQH 371
L +P+ +I A H
Sbjct: 436 LIKRMPMKPNETVLGAMIGACWIH 459
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 141/309 (45%), Gaps = 19/309 (6%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV + + +++ G + AR+VF+ MP ++ W+SM+ Y G + A+F +P
Sbjct: 180 DVVIWTMMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRIP 239
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQR 151
++N+ WN+M+AG VQN ++A F M E + + +++S + G L ++
Sbjct: 240 VRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQ 299
Query: 152 LFKEMPCPNVVSYTVMIDGYVKV-KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
+ + C + ++ G + + + G + AR +F++ RN W MI G NG
Sbjct: 300 MHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQ 359
Query: 211 YEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNI 262
E E RM + N+ V +++ G V EA + ++ I +
Sbjct: 360 CNEVLEYLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKMEEYGIEMGIRHYGC 419
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
M+ + GR +EA L +M M+P++ + ++ AC + + Q ++ G
Sbjct: 420 MVDLLGRAGRLKEAYELIKRMP---MKPNETVLGAMIGACWIHSDMKMAEQVMKMI---G 473
Query: 323 FDSDLSVNN 331
DS VN+
Sbjct: 474 VDSAACVNS 482
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 120/250 (48%), Gaps = 7/250 (2%)
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
T ++ + G+ +A ++F M ++N V AMI G+ + G A F+++ +
Sbjct: 90 TAIVAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEMPGKTRV 149
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SW+ MI G+A+NG A F ++ D +I+ + A ++ R+ + L+
Sbjct: 150 SWSQMIGGFARNGDTLTARKFFDKVPYE--LKDVVIWTMMVDGYAKKGEMEDAREVFELM 207
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+ + V +++V Y K G ++++E F + ++ WN++IA + Q+ KA
Sbjct: 208 PERNY----FVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKAL 263
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F +M G PD T +S+LS C + G +D + + M+ GI + L+D+
Sbjct: 264 EAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHH-MIECKGIAVNQFVLSGLIDM 322
Query: 439 MSRAGQLQRA 448
++ G L A
Sbjct: 323 YAKCGDLVNA 332
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
+ AL L+ Q R D + L AC S L + +A IK G D D+ + A+
Sbjct: 34 KRALVLYKQ-TRHDTTHDPTVIPQLLKACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAI 92
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
V Y+KCG + D+ F + + V+WN +I + ++ A F++M
Sbjct: 93 VAAYAKCGVVCDARKVFDLMHERNDVTWNAMIGGYLRNGDAKSALLAFEEM 143
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 244/438 (55%), Gaps = 31/438 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQH-SRALFDAMP--MKNVV 100
+ +++ G I AR++FDKMP + T+N+M++ Y H + L+ +P ++ V
Sbjct: 13 LVVYAKNGQIINARKLFDKMPERTTATYNAMISGYILKARKFHLAEELYREVPCEFRDPV 72
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPE--RNAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
NA++ G ++ +EA F + E R+ S++A++ G + GR+ A++LF MP
Sbjct: 73 CSNALMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFDRMPE 132
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR-----NEVSWTVMINGL-----VEN 208
NVVS++ MIDGY+ E G F M R N + T+MI G V++
Sbjct: 133 RNVVSWSAMIDGYM---EKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGNCGGVKD 189
Query: 209 GL-------------YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
G+ + A+E+F RMP+K++++ TAMI F G++ + LF ++ +
Sbjct: 190 GMQIHGLVSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEK 249
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
D W ++I+G+ N EEAL + +M R G +P+ L S+ A ASL L++G Q +
Sbjct: 250 DDFVWTVLISGFVSNEEYEEALCWYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIH 309
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
+ V+K + DLS+ N+L++ Y+KCG++ D+ F + ++VS N++I F Q+
Sbjct: 310 SHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGFGE 369
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
+A + + +M + P+ +TFL++LS C AG I+E NLF+ M Y P ++HYAC+
Sbjct: 370 EALNMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGRNLFDTMKSRYRNEPDADHYACM 429
Query: 436 VDVMSRAGQLQRACEIIR 453
VD++ RAG L A ++IR
Sbjct: 430 VDLLGRAGLLDEANDLIR 447
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 177/373 (47%), Gaps = 36/373 (9%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
S DV + + R G I AR++FD+MP ++VV+W++M+ Y G ++ F
Sbjct: 100 SKRDVVSWSAVVVGLCRDGRIGYARKLFDRMPERNVVSWSAMIDGYMEKGLFENGFGFFL 159
Query: 93 AMPMKNVVSWNA-----MVAGC-----VQNDM-------------LDEAFNYFAAMPERN 129
M + VV N+ M+ GC V++ M +D A+ F MPE++
Sbjct: 160 EMRREGVVEVNSTTMTIMIKGCGNCGGVKDGMQIHGLVSRLGFEFVDAAYEVFERMPEKD 219
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDA 189
S+ AMI F+ GR+ LF + + +TV+I G+V +E A +
Sbjct: 220 LISWTAMIRRFVTDGRMGKPVELFDTLKEKDDFVWTVLISGFVSNEE---YEEALCWYVR 276
Query: 190 MPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKN----VVASTAMITGFCKQGK 241
M R N ++ + ++ E ++ + + N + ++I+ + K G
Sbjct: 277 MNREGCKPNPLTISSVLAASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGN 336
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
V +A+ +F + ++ S N +I G+ QNG GEEALN++ +M ++P+ + F+++ +A
Sbjct: 337 VTDAYKIFVDVVELNVVSNNSVINGFTQNGFGEEALNMYKRMQNESLEPNRVTFLAVLSA 396
Query: 302 CASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIV 359
C L+++GR + + ++ + D +V + + G + ++ +L T +P
Sbjct: 397 CTHAGLIEEGRNLFDTMKSRYRNEPDADHYACMVDLLGRAGLLDEANDLIRSITVKPHSG 456
Query: 360 SWNTIIAAFAQHV 372
W ++AA + H+
Sbjct: 457 VWGALLAASSAHL 469
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 250/544 (45%), Gaps = 134/544 (24%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM--KN 98
N I + ++ NIT AR++FDK+P D+V ++L+AY SG + ++ LF+A P+ ++
Sbjct: 44 NRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRD 103
Query: 99 VVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGF-------------- 140
VS+NAM+ + A N F M + ++++++S
Sbjct: 104 TVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLH 163
Query: 141 ---IKFGRL----------------------------CDAQRLFKEMPCPNVV--SYTVM 167
IK G L A+++F E P + S+T M
Sbjct: 164 CEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTM 223
Query: 168 IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------ 221
I GYV+ + + AR L D + +V+W MI+G V GLYEEA++ F RM
Sbjct: 224 IAGYVRNDD---LVAARELLDGLTYPIDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQ 280
Query: 222 ---------------------------------------PQKNVVAS--TAMITGFCKQG 240
P + V S A+IT + K
Sbjct: 281 EDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYD 340
Query: 241 KVDEAWTLFQQIRCRDIASWN-------------------------------IMITGYAQ 269
++ EA +F ++ RDI SWN +MI+G AQ
Sbjct: 341 RMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQ 400
Query: 270 NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSV 329
NG GEE L LF+QM G++P D F TAC+ L LD G+Q ++ VI+ G DS LS
Sbjct: 401 NGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSA 460
Query: 330 NNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV 389
NAL+TMYS+CG + +E F D VSWN +IAA AQH KA F+QM+ +
Sbjct: 461 GNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKEDI 520
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
PD ITFL++L+ C AG I E + F+ M YGI P +HYA L+D++ RAG +A
Sbjct: 521 LPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQ 580
Query: 450 EIIR 453
+I+
Sbjct: 581 SVIK 584
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 187/391 (47%), Gaps = 51/391 (13%)
Query: 87 SRALFDAMPMKNVV--SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFG 144
+R +FD P + SW M+AG V+ND L A + ++NAMISG+++ G
Sbjct: 203 ARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRG 262
Query: 145 RLCDAQRLFKEMPCPNV----VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
+A F+ M + +YT +I E G+ R V +
Sbjct: 263 LYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSH 322
Query: 201 MINGLVENGLYE---------EAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQ 251
V N L EA +F +MP +++++ A+++G+ +++EA ++F +
Sbjct: 323 HFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSE 382
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+ R++ +W +MI+G AQNG GEE L LF+QM G++P D F TAC+ L LD G
Sbjct: 383 MPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG 442
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
+Q ++ VI+ G DS LS NAL+TMYS+CG + +E F D VSWN +IAA AQH
Sbjct: 443 QQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQH 502
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVC---------------------------- 403
KA F+QM+ + PD ITFL++L+ C
Sbjct: 503 GHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDH 562
Query: 404 --------CRAGKIDESMNLFNLMVHDYGIP 426
CRAG ++ ++ M + G P
Sbjct: 563 YARLIDLLCRAGMFLKAQSVIKSMPFEAGAP 593
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 137/436 (31%), Positives = 239/436 (54%), Gaps = 20/436 (4%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
F D + N + +++ G I+ A+Q+FDKM +D+ +WN++L+AY G + +F
Sbjct: 61 FQPTDSFIHNQLLHLYAKCGKISDAQQLFDKMSKRDIYSWNALLSAYAKVGLVEDLNLVF 120
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----------NAASYNAMISGFI 141
D M ++ VS+N M+A N + +A +F M E NA + + F
Sbjct: 121 DRMACRDSVSYNTMIACFASNWLSGKALRFFVRMQEDGFRPTQYSYVNALQACSQLLDF- 179
Query: 142 KFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
+ G+ + + E NV + + D Y K G I RAR LFD M +N VSW +M
Sbjct: 180 RLGKQIHGRVVVGEFE-KNVFVWNAVTDLYAKC---GDIDRARWLFDGMVNKNLVSWNLM 235
Query: 202 INGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
I+G V+ G +E F +M + + V ++++ + + G+VD+A +F +I +D
Sbjct: 236 ISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDE 295
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
W MI GYAQ+GR E+AL LFS+M+R ++PD ++ ++CA LA L G+ +
Sbjct: 296 ICWTTMIVGYAQSGREEDALMLFSEMLRGNVRPDSHTISTVVSSCAKLASLYHGQAVHGK 355
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
VI G DS++ V++ALV MY KCG +D+ + F +++ WN++I +AQ+ +A
Sbjct: 356 VILMGVDSNMLVSSALVDMYCKCGVPLDARVIFETMPIKNVIIWNSMILGYAQNGEAEEA 415
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
+ +++M+ +PD I+F+ +LS C + E F+ + + G+ P +HYAC++
Sbjct: 416 LTLYERMLQENFKPDNISFVGVLSACINTNMVKEGRKHFD-SISEQGMTPTLDHYACMII 474
Query: 438 VMSRAGQLQRACEIIR 453
++ R+G + +A ++I+
Sbjct: 475 LLGRSGNIDKALDLIK 490
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/434 (32%), Positives = 234/434 (53%), Gaps = 21/434 (4%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D Y N + +++ G I AR++FD+MP + V WN M++ YW G + + LF M
Sbjct: 118 DHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMG 177
Query: 96 ----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
+NV++W M+ G + L A YF MPER+ S+NAM+SG+ + G + R
Sbjct: 178 DQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIR 237
Query: 152 LFKEMPCPNVV-----SYTVMIDGYVKVKEGG-GIARARALFDAMP-RRNEVSWTVMING 204
LF +M P V ++ +I + + + R L D + R N T +++
Sbjct: 238 LFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDM 297
Query: 205 LVENGLYEEAWELF---GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
+ G E A ++F G ++ V AMI+ + + G + A LF ++ RD SWN
Sbjct: 298 HAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWN 357
Query: 262 IMITGYAQNGRGEEALNLFSQMVRT--GMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
MI GY QNG +A+ LF +M+ + +PD++ VS+F+AC L L G +++
Sbjct: 358 SMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILK 417
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+ +SV N+L+ MYS+CGS+ D+ L F + + D+VS+NT+I+ FA+H ++
Sbjct: 418 VNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIE 477
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
+M G+ PD IT++++L+ C AG +DE LF + P +HYAC++D++
Sbjct: 478 LLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKF-----PDVDHYACMIDML 532
Query: 440 SRAGQLQRACEIIR 453
RAG+L+ A ++I+
Sbjct: 533 GRAGRLEEAMKLIQ 546
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 154/326 (47%), Gaps = 28/326 (8%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPT---KDVVTWNSMLTAYWHSGFPQHSRAL 90
+Y V A L++ A + GN+ AA ++F+++ + V WN+M++AY G ++ L
Sbjct: 287 NYFVKTALLDMHA--KCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHL 344
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM---PERNAASYNAMISGFIKFGRLC 147
FD MP ++ VSWN+M+AG QN +A F M + M+S F G L
Sbjct: 345 FDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLG 404
Query: 148 D------AQRLFKEMPCPNVVS-YTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
+ A + K +S Y +I+ Y + G + A +F M R+ VS+
Sbjct: 405 ELGLGNWAVSILKVNHIQISISVYNSLINMYSRC---GSMQDAVLIFQEMATRDLVSYNT 461
Query: 201 MINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+I+G E+G E+ EL +M + + + A++T G +DE LF+ I+ D
Sbjct: 462 LISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPD 521
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ + MI + GR EEA+ L M M+P I+ SL A + ++ G A
Sbjct: 522 VDHYACMIDMLGRAGRLEEAMKLIQSM---PMEPHAGIYGSLLNATSIHKQVELGELAAA 578
Query: 317 LVIKHGFDSDLSVNNALVT-MYSKCG 341
+ K + S N AL++ +Y+ G
Sbjct: 579 KLFK--VEPHNSGNYALLSNIYASAG 602
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 233/431 (54%), Gaps = 16/431 (3%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D Y A IA++S N+++A VF+++P +V +N ++ AY SG +S F +
Sbjct: 53 DPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLL 112
Query: 96 MKNV-------VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY-----NAMISGFIKF 143
+V ++ ++ GC + A E+ + N++I + +
Sbjct: 113 KMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRC 172
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
G + A ++F M +VVS+ M+ G VK G + A +FD MP R+ VSW M++
Sbjct: 173 GDVEMAMKVFSGMEERDVVSWNSMVGGLVK---NGDLDGALKVFDEMPERDRVSWNTMLD 229
Query: 204 GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
G + G ++A++LF RM ++++V+ + M+ G+ K G +D A LF + +++ W +
Sbjct: 230 GFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTI 289
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I+GYA+ G+ +EA+NL +M ++G++ DD F+S+ ACA +L G++ + ++ F
Sbjct: 290 ISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRF 349
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAF-GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
V N+ + MY+KCG + D+ F G ++ D+VSWN++I F H K+ F+
Sbjct: 350 RCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFN 409
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
M+ G +PD TF+ LL C AG ++E F M YGI P+ EHY C+VD++ R
Sbjct: 410 TMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRG 469
Query: 443 GQLQRACEIIR 453
G L+ A ++R
Sbjct: 470 GHLKEAFWLVR 480
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 176/348 (50%), Gaps = 14/348 (4%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+D++ N I + R G++ A +VF M +DVV+WNSM+ +G + +FD M
Sbjct: 157 WDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEM 216
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFK 154
P ++ VSWN M+ G + +D+AF F M ER+ S++ M+ G+ K G + A+ LF
Sbjct: 217 PERDRVSWNTMLDGFTKAGEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFD 276
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGL 210
P N+V +T +I GY E G + A L D M R ++ + ++ E+G+
Sbjct: 277 RCPVKNLVLWTTIISGYA---EKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGM 333
Query: 211 YEEAWELFGRMPQKNVVASTAMITGF----CKQGKVDEAWTLFQQIRC-RDIASWNIMIT 265
++ + ST ++ F K G VD+A+ +F ++ +D+ SWN MI
Sbjct: 334 LGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIH 393
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT-YALVIKHGFD 324
G+ +G GE+++ LF+ MVR G +PD F+ L AC L+++GR Y++ +G
Sbjct: 394 GFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIV 453
Query: 325 SDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ +V + + G + ++ L +P+ + T++ A H
Sbjct: 454 PQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMH 501
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/530 (30%), Positives = 244/530 (46%), Gaps = 84/530 (15%)
Query: 6 IVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT 65
++ +K AR H ++ FSS +++ N + + + G + AR+VFD M
Sbjct: 25 LLDTCVKSKSVFEARLVHARII-KTQFSS-EIFIQNRLVDVYGKCGFLEDARKVFDHMQQ 82
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
++ +WN++L A G + LF MP ++ SWNAMV+G Q D +EA + M
Sbjct: 83 RNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDM 142
Query: 126 PER----NAASYNAMIS---------------GFIKFGR--------------------L 146
N S+ + +S G I R +
Sbjct: 143 HSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVV 202
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG----------------------GIARAR 184
AQR F +M N+VS+ +I Y + G +A A
Sbjct: 203 ASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASAC 262
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLY---------------EEAWELFGRMPQKNVVAS 229
A A+ ++ VM + N L EA +F RMP ++VV+
Sbjct: 263 ASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSE 322
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
T+M++G+ K V A +F + R++ SWN +I GY QNG EEA+ LF + R +
Sbjct: 323 TSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIW 382
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGF------DSDLSVNNALVTMYSKCGSI 343
P F +L ACA+LA L GRQ + ++KHGF DSD+ V N+L+ MY KCG +
Sbjct: 383 PTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLV 442
Query: 344 VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
D L F + + D VSWN +I +AQ+ +A F +M+ G RPD +T + +LS C
Sbjct: 443 EDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSAC 502
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
AG ++E F M ++G+ P +HY C+VD++ RAG L A +I+
Sbjct: 503 SHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQ 552
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 176/402 (43%), Gaps = 61/402 (15%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG---- 82
+ AK S DVY + + +S+ + +A++ FD M +++V+WNS++T Y +G
Sbjct: 176 LIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGK 235
Query: 83 ------------------------------------FPQHSRALFDAMPMKNVVSWNAMV 106
H+R + ++V NA+V
Sbjct: 236 ALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALV 295
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
+ ++EA F MP R+ S +M+SG+ K + A+ +F M NVVS+
Sbjct: 296 DMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNA 355
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
+I GY + E R L +R + T G + N A GR ++
Sbjct: 356 LIAGYTQNGENEEAVRLFLLL----KRESIWPTHYTFGNLLNACANLADLKLGRQAHTHI 411
Query: 227 V---------------ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
+ ++I + K G V++ +F+++ RD SWN MI GYAQNG
Sbjct: 412 LKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNG 471
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVN 330
G EAL +F +M+ +G +PD + + + +AC+ L+++GR + ++ I+HG
Sbjct: 472 YGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY 531
Query: 331 NALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+V + + G + ++ L +PD V W +++AA H
Sbjct: 532 TCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVH 573
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
F L C + + R +A +IK F S++ + N LV +Y KCG + D+ F
Sbjct: 22 FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQ 81
Query: 355 QPDIVSWNTIIAAFAQ 370
Q + SWN ++ A +
Sbjct: 82 QRNTFSWNAVLGALTK 97
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 238/445 (53%), Gaps = 20/445 (4%)
Query: 24 FLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGF 83
FL K D Y N + +++ G I AR++FD+MP + V WN M++ YW G
Sbjct: 121 FLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGN 180
Query: 84 PQHSRALFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISG 139
+ + LF M +NV++W M+ G + L A YF MPER+ S+NAM+SG
Sbjct: 181 EEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSG 240
Query: 140 FIKFGRLCDAQRLFKEMPCPNVV-----SYTVMIDGYVKVKEGG-GIARARALFDAMP-R 192
+ + G + RLF +M P V ++ +I + + + R L D + R
Sbjct: 241 YAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFR 300
Query: 193 RNEVSWTVMINGLVENGLYEEAWELF---GRMPQKNVVASTAMITGFCKQGKVDEAWTLF 249
N T +++ + G E A ++F G ++ V AMI+ + + G + A LF
Sbjct: 301 PNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLF 360
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTACASLALL 308
++ RD SWN MI GY QNG +A+ LF +M+ + +PD++ VS+F+AC L L
Sbjct: 361 DKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGEL 420
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
G +++ ++ +SV N+L++MYS+CGS+ D+ L F + + D+VS+NT+I+ F
Sbjct: 421 GLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTLISGF 480
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
A+H ++ +M G+ PD IT++++L+ C AG + E LF + P
Sbjct: 481 AEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIKF-----PD 535
Query: 429 SEHYACLVDVMSRAGQLQRACEIIR 453
+HYAC++D++ RAG+L+ A ++I+
Sbjct: 536 VDHYACMIDMLGRAGRLEEAMKLIQ 560
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 143/303 (47%), Gaps = 24/303 (7%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPT---KDVVTWNSMLTAYWHSGFPQHSRAL 90
+Y V A L++ A + GN+ AA ++F+++ + V WN+M++AY G +R L
Sbjct: 302 NYFVKTALLDMHA--KCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHL 359
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM--PERNAASYNAMISGFIKFGRLCD 148
FD MP ++ VSWN+M+AG QN +A F M E + M+S F G L +
Sbjct: 360 FDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGE 419
Query: 149 ------AQRLFKEMPCPNVVS-YTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
A + KE +S Y +I Y + G + A +F M R+ VS+ +
Sbjct: 420 LGLGNWAVSILKENHIQISISVYNSLISMYSRC---GSMQDAVLIFQEMATRDLVSYNTL 476
Query: 202 INGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
I+G E+G E+ EL +M + + + A++T G + E LF+ I+ D+
Sbjct: 477 ISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIKFPDV 536
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+ MI + GR EEA+ L M M+P I+ SL A + ++ G A
Sbjct: 537 DHYACMIDMLGRAGRLEEAMKLIQSM---PMEPHAGIYGSLLNATSIHKQVELGELAAAK 593
Query: 318 VIK 320
+ K
Sbjct: 594 LFK 596
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/540 (27%), Positives = 253/540 (46%), Gaps = 121/540 (22%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
LV + FSS + Y N + +SR+GN+++A Q+F M +D V++NS+++ G+
Sbjct: 309 LVLKQGFSS-ETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYIN 367
Query: 86 HSRALFDAMPMK----NVVSWNAMVAGC--------------------------VQNDML 115
+ ALF M + + V+ ++++ C V+ +L
Sbjct: 368 RALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLL 427
Query: 116 D---------EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVV 162
D A +F A N +N M+ G+ + L + ++F +M PN
Sbjct: 428 DLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQF 487
Query: 163 SY-----------------------------------TVMIDGYVKVKEGGGIARARALF 187
+Y +V+ID Y K G + A +F
Sbjct: 488 TYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAK---HGKLDHALKIF 544
Query: 188 DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS------------------ 229
+ + VSWT MI G ++ + EA LF M + + +
Sbjct: 545 RRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALD 604
Query: 230 ---------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
A+++ + + GKV EA+ F QI +D SWN +++G+A
Sbjct: 605 QGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFA 664
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
Q+G EEALN+F+QM + G++ + F S +A A++A + G+Q + ++ K G+DS+
Sbjct: 665 QSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETE 724
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
V+NAL+T+Y+KCG+I D+E F + + +SWN++I ++QH ++A F+ M +
Sbjct: 725 VSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDMKQLD 784
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
V P+ +TF+ +LS C G +DE ++ F M + + P+ EHYAC+VD++ R+G L RA
Sbjct: 785 VLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRA 844
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 189/385 (49%), Gaps = 21/385 (5%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS-- 101
I + + G +++A++VF+ + +D V+W +M++ +G+ + + LF M +
Sbjct: 225 IDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICPTP 284
Query: 102 --WNAMVAGCVQNDMLDEAFNYFAAMPERNAASY----NAMISGFIKFGRLCDAQRLFKE 155
++++++ C + + + + ++ +S NA+++ + + G L A+++F
Sbjct: 285 YIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHC 344
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRRNEVSWTVMIN-----GLV 206
M + VSY +I G + + G I RA ALF M + + V+ +++ G +
Sbjct: 345 MSQRDRVSYNSLISG---LAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGAL 401
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
NG ++ + M ++V +++ + K + A F ++ WN+M+ G
Sbjct: 402 PNGKQFHSYAIKAGMTS-DIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVG 460
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
Y Q ++ +F+QM G+ P+ + S+ C +L D G Q + V+K GF +
Sbjct: 461 YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFN 520
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ V++ L+ MY+K G + + F + + D+VSW +IA + QH + +A + F +M
Sbjct: 521 VYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQD 580
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDE 411
G++ D I F S +S C +D+
Sbjct: 581 QGIKSDNIGFASAISACAGIQALDQ 605
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 188/446 (42%), Gaps = 73/446 (16%)
Query: 51 GNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SWNAMV 106
G++ A VFD+MP + + WN + + LF M KNV + ++
Sbjct: 130 GDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVL 189
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
GC N + +F + + + + SGF +C+
Sbjct: 190 RGCSGNAV---SFRFVEQIHAK------TITSGFESSTFICNP----------------- 223
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM----- 221
+ID Y K G ++ A+ +F+ + R+ VSW MI+GL +NG EEA LF +M
Sbjct: 224 LIDLYFK---NGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGI 280
Query: 222 -PQKNVVAS---------------------------------TAMITGFCKQGKVDEAWT 247
P + +S A++T + + G + A
Sbjct: 281 CPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQ 340
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
+F + RD S+N +I+G AQ G AL LF +M +PD + SL +ACAS+
Sbjct: 341 IFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGA 400
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
L G+Q ++ IK G SD+ V +L+ +Y KC I + F ++V WN ++
Sbjct: 401 LPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVG 460
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
+ Q K+ F QM G+ P+ T+ S+L C G D + + V G
Sbjct: 461 YGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQI-HTQVLKTGFQF 519
Query: 428 RSEHYACLVDVMSRAGQLQRACEIIR 453
+ L+D+ ++ G+L A +I R
Sbjct: 520 NVYVSSVLIDMYAKHGKLDHALKIFR 545
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 141/299 (47%), Gaps = 43/299 (14%)
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
++ K C VV +ID Y+ G + A +FD MP R+ W + N + L
Sbjct: 106 KILKMGFCDEVVLCERLIDFYLAF---GDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERL 162
Query: 211 YEEAWELFGRMPQKNV--------------------------VASTAMITGF------C- 237
LF RM KNV + + + +GF C
Sbjct: 163 MGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICN 222
Query: 238 -------KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
K G + A +F+ ++ RD SW MI+G +QNG EEA+ LF QM +G+ P
Sbjct: 223 PLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICP 282
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
IF S+ +AC + + G+Q + LV+K GF S+ V NALVT+YS+ G++ +E F
Sbjct: 283 TPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIF 342
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
SQ D VS+N++I+ AQ +A + F +M +PD +T SLLS C G +
Sbjct: 343 HCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGAL 401
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 150/347 (43%), Gaps = 52/347 (14%)
Query: 74 MLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY 133
++ Y G H+ +F + +VVSW AM+AG Q+D EA N F M ++ S
Sbjct: 527 LIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSD 586
Query: 134 NAMISGFIKFGRLC------DAQRLFKEMPCPNVVSYTVMI-DGYVKV-KEGGGIARARA 185
N GF C D R C + S + I + V + G + A A
Sbjct: 587 NI---GFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYA 643
Query: 186 LFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ---------------------- 223
FD + ++ VSW +++G ++G +EEA +F +M +
Sbjct: 644 AFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIAN 703
Query: 224 -----------------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
S A+IT + K G +D+A F ++ ++ SWN MITG
Sbjct: 704 VRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITG 763
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDS 325
Y+Q+G G EAL LF M + + P+ + FV + +AC+ + L+D+G + ++ H
Sbjct: 764 YSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVP 823
Query: 326 DLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQH 371
+V + + G + ++ + QPD + W T+++A H
Sbjct: 824 KPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVH 870
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP---- 95
+N I +++ G I A + F +MP K+ ++WNSM+T Y G + LF+ M
Sbjct: 726 SNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDMKQLDV 785
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN-----AASYNAMISGFIKFGRLCDAQ 150
+ N V++ +++ C ++DE +YF +M E + Y ++ + G L A+
Sbjct: 786 LPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAK 845
Query: 151 RLFKEMP 157
R +EMP
Sbjct: 846 RFVEEMP 852
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 229 bits (585), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 220/437 (50%), Gaps = 52/437 (11%)
Query: 65 TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAA 124
+ DV +S+L Y +GF +R LFD MP +N VSW M++G +D+ D+A F
Sbjct: 150 SGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFEL 209
Query: 125 MPE----RNAASYNAMISG-----FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK 175
M +N + +++S F+ GR + + K V ++ Y K
Sbjct: 210 MRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAI-KNGLLAIVSVANALVTMYAKC- 267
Query: 176 EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS------ 229
G + A F+ +N ++W+ M+ G + G ++A +LF +M V+ S
Sbjct: 268 --GSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVG 325
Query: 230 ---------------------------------TAMITGFCKQGKVDEAWTLFQQIRCRD 256
+A++ + K G + +A F+ ++ D
Sbjct: 326 VINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPD 385
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ W +ITGY QNG E LNL+ +M + P++L S+ AC+SLA LDQG+Q +A
Sbjct: 386 VVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHA 445
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
+IK+GF ++ + +AL MY+KCGS+ D L F + D++SWN +I+ +Q+ K
Sbjct: 446 RIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNK 505
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
A F++M+ G++PD +TF++LLS C G +D F +M ++ I P EHYAC+V
Sbjct: 506 ALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMV 565
Query: 437 DVMSRAGQLQRACEIIR 453
D++SRAG+L A E I
Sbjct: 566 DILSRAGKLNEAKEFIE 582
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 196/402 (48%), Gaps = 35/402 (8%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPT--KDVVTWNSMLTAYWHSGFPQHSR---ALF 91
+Y N + +++ +++ A +FD + KD V+WNS++ A+ + S +LF
Sbjct: 46 IYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLF 105
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY-------------NAMIS 138
M N V NA V A N + + A S +++++
Sbjct: 106 RRMMRANNVIPNAHTLAGV----FSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLN 161
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA-RARALFDAMPR----R 193
+ K G + DA++LF MP N VS+ MI GY IA +A +F+ M R +
Sbjct: 162 MYCKTGFVFDARKLFDRMPERNTVSWATMISGYAS----SDIADKAVEVFELMRREEEIQ 217
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA----STAMITGFCKQGKVDEAWTLF 249
NE + T +++ L + ++ + ++A + A++T + K G +D+A F
Sbjct: 218 NEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTF 277
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
+ ++ +W+ M+TGYAQ G ++AL LF++M +G+ P + V + AC+ L +
Sbjct: 278 EFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVV 337
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFA 369
+G+Q ++ K GF L V +A+V MY+KCGS+ D+ F QPD+V W +II +
Sbjct: 338 EGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYV 397
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
Q+ Y + + +M V P+ +T S+L C +D+
Sbjct: 398 QNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQ 439
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRC--RDIASWNIMITGYAQNGRGEE---ALNL 279
++ + + + K + A TLF I +D SWN +I ++QN A++L
Sbjct: 45 SIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISL 104
Query: 280 FSQMVR-TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
F +M+R + P+ +F+A ++L+ + G+Q +++ +K G D+ V ++L+ MY
Sbjct: 105 FRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYC 164
Query: 339 KCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
K G + D+ F + + + VSW T+I+ +A + KA F+ M
Sbjct: 165 KTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELM 210
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 229 bits (584), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 220/422 (52%), Gaps = 13/422 (3%)
Query: 41 NLNIAAFSRAGNITAARQVFDK-MPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
N I + N+ A ++ D+ + + ++V+WN ++TAY LFD MP+K+
Sbjct: 12 NYMINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDA 71
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
VSWN M++G + + + F M + IS ++ + L +++
Sbjct: 72 VSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHAL 131
Query: 160 --------NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
NV + +I Y +KE + RA F+ + ++ SW +++ +E G +
Sbjct: 132 AFHLGHYLNVFVGSSLIRAYAGLKEEEALGRA---FNDISMKDVTSWNALVSSYMELGKF 188
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
+A F +MPQ+N+++ T ++ G+ K +V++A ++F + R++ SW MI+GY QN
Sbjct: 189 VDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNK 248
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN 331
R +AL LF M +T +P+ F S+ ACA + L G Q + +IK G +D+
Sbjct: 249 RFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLT 308
Query: 332 ALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRP 391
+LV MY+KCG + + F ++VSWN II +A H L +A FD+M VG P
Sbjct: 309 SLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGT-P 367
Query: 392 DGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
D +TF+++LS C AG ++E F M+ YGI EHY+C+VD+ RAG+ A +
Sbjct: 368 DEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENL 427
Query: 452 IR 453
I+
Sbjct: 428 IK 429
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 207/439 (47%), Gaps = 92/439 (20%)
Query: 16 SSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSML 75
++ + H LL ++ S ++ N+ + A+ + I +FDKMP KD V+WN ML
Sbjct: 21 NNNVKQAHKLL--DENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIML 78
Query: 76 TAYWHSG--------FPQHSRA-------------------------------LFDAMPM 96
+ + + F Q RA F
Sbjct: 79 SGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHALAFHLGHY 138
Query: 97 KNVVSWNAMV---AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
NV ++++ AG + + L AFN + ++ S+NA++S +++ G+ DAQ F
Sbjct: 139 LNVFVGSSLIRAYAGLKEEEALGRAFNDISM---KDVTSWNALVSSYMELGKFVDAQTAF 195
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
+MP N++S+T +++GYVK K+ + +AR++FD M RN VSWT MI+G V+N + +
Sbjct: 196 DQMPQRNIISWTTLVNGYVKNKQ---VNKARSVFDDMSERNVVSWTAMISGYVQNKRFVD 252
Query: 214 AWELFGRMPQ---------------------------------------KNVVASTAMIT 234
A +LF M + +V+ T+++
Sbjct: 253 ALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVD 312
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
+ K G +D A+ +F+ IR +++ SWN +I GYA +G AL F +M G PD++
Sbjct: 313 MYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVG-TPDEVT 371
Query: 295 FVSLFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSIVDSE-LAFGQ 352
FV++ +AC L+++G + + ++ K+G +++ + +V +Y + G ++E L
Sbjct: 372 FVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNM 431
Query: 353 TSQPDIVSWNTIIAAFAQH 371
+PD+V W ++AA H
Sbjct: 432 PFEPDVVLWGALLAACGLH 450
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM---KNVVSWN 103
+++ G++ AA VF+ + K++V+WN+++ Y G + FD M + + V++
Sbjct: 314 YAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMKVVGTPDEVTFV 373
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
+++ CV +++E +F M + Y+ M+ + + GR +A+ L K MP
Sbjct: 374 NVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPF 433
Query: 159 -PNVVSYTVMID--GYVKVKEGGGIA--RARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
P+VV + ++ G E G A R R L + P VS++V+ E G++
Sbjct: 434 EPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHP----VSYSVLSKIQGEKGVWSS 489
Query: 214 AWELFGRMPQKNVVASTAM 232
EL M ++ + TA+
Sbjct: 490 VNELRDTMKERGIKKQTAI 508
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 224/430 (52%), Gaps = 48/430 (11%)
Query: 68 VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE 127
+ +NS+++ Y G + +R +FD M +++ V+WN+M+AG V+N E F F M
Sbjct: 229 IPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQL 288
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS--------YTVMIDGYVKVKEGGG 179
+ + IK L K M C + S T ++ K KE
Sbjct: 289 AGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKE--- 345
Query: 180 IARARALFDAMPR-RNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS--------- 229
+ A +LF M +N VSWT MI+G ++NG ++A LF +M ++ V +
Sbjct: 346 MDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILT 405
Query: 230 --------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
TA++ + K G +A +F+ I +D+ +W+ M
Sbjct: 406 VHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAM 465
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS-LALLDQGRQTYALVIKHG 322
+ GYAQ G EEA LF Q+++ G++P++ F S+ ACAS A +QG+Q +A IK
Sbjct: 466 LAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMR 525
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
++ L V++ALVTMY+K G+I + F + + D+VSWN++I+ ++QH KA FD
Sbjct: 526 LNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFD 585
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M + D +TF+ +++ C AG +++ FN M++D+ I P +HY+C++D+ SRA
Sbjct: 586 EMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRA 645
Query: 443 GQLQRACEII 452
G L++A II
Sbjct: 646 GMLEKAMGII 655
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 201/428 (46%), Gaps = 32/428 (7%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SW 102
+ + N+ R+VFD+M ++VV+W S+L Y +G + LF M + V+ +
Sbjct: 138 YMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTV 197
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
+ ++A V ++ A + E +N++IS + + G L DA+ +F +M
Sbjct: 198 STVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEI 257
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
+ V++ MI GYV+ G +F+ M + ++++ L
Sbjct: 258 RDWVTWNSMIAGYVR---NGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALV 314
Query: 219 GRMPQK--------NVVASTAMITGFCKQGKVDEAWTLFQQI-RCRDIASWNIMITGYAQ 269
M K + + TA++ K ++D+A +LF + +++ SW MI+G Q
Sbjct: 315 KLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQ 374
Query: 270 NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSV 329
NG ++A+NLFSQM R G++P+ + ++ T + + + +A VIK ++ SV
Sbjct: 375 NGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFV----SEMHAEVIKTNYERSSSV 430
Query: 330 NNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV 389
AL+ Y K G+ +D+ F D+++W+ ++A +AQ +A F Q+I G+
Sbjct: 431 GTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGI 490
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC----LVDVMSRAGQL 445
+P+ TF S+++ C E F H Y I R + C LV + ++ G +
Sbjct: 491 KPNEFTFSSVINACASPTAAAEQGKQF----HAYAIKMRLNNALCVSSALVTMYAKRGNI 546
Query: 446 QRACEIIR 453
A E+ +
Sbjct: 547 DSAHEVFK 554
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 164/369 (44%), Gaps = 53/369 (14%)
Query: 84 PQHSRALFDAMPMK--NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFI 141
P + LFD +P + + N ++ ++ EA N F ++ + + +S
Sbjct: 41 PHIAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVF 100
Query: 142 KFGRLCDAQRLFKEMPCP--------NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
+L +++ C +V T ++D Y+K + + R +FD M R
Sbjct: 101 NICAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTE---NVNDGRRVFDEMGER 157
Query: 194 NEVSWTVMINGLVENGLYEEAWELF------GRMPQKNVVAS------------------ 229
N VSWT ++ G NGLY WELF G +P + V++
Sbjct: 158 NVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVH 217
Query: 230 ---------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
++I+ + + G + +A +F ++ RD +WN MI GY +NG+
Sbjct: 218 AMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDL 277
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
E +F++M G++P + F S+ +CASL L + +K GF +D V AL+
Sbjct: 278 EVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALM 337
Query: 335 TMYSKCGSIVDSELAFGQTSQ-PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
SKC + D+ F + ++VSW +I+ Q+ +A + F QM GV+P+
Sbjct: 338 VALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNH 397
Query: 394 ITFLSLLSV 402
T+ ++L+V
Sbjct: 398 FTYSAILTV 406
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 98/179 (54%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+V T+++ + K V++ +F ++ R++ SW ++ GY+ NG LF QM
Sbjct: 127 HVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQ 186
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
G+ P+ ++ A + ++ G Q +A+V+KHGF+ + V N+L+++YS+ G +
Sbjct: 187 YEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLR 246
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
D+ F + D V+WN++IA + ++ + F++M GV+P +TF S++ C
Sbjct: 247 DARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSC 305
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Query: 245 AWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
A LF +I R + N ++ Y+++ + +EALNLF ++ + +QPD+ +F C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
A GRQ + +K G +SV +LV MY K ++ D F + + ++VSW
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
+++A ++ + LY F QM GV P+ T ++++ G + + + + MV
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQV-HAMVVK 222
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+G + L+ + SR G L+ A ++
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDV 251
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 220/443 (49%), Gaps = 51/443 (11%)
Query: 53 ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP--MKNVVSWNAMV-AGC 109
+ +AR VF+K+P+ V + +L AY H+ + LF+ +P K+ +SWN+++ A
Sbjct: 46 LDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASI 105
Query: 110 VQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC--PNVVSYTVM 167
+ ND + A F MP+RN+ S+ +I GF+ GR+ +A+R F MP +V ++ M
Sbjct: 106 ICNDFVT-AVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAM 164
Query: 168 IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV 227
++GY G + A LF MP R+ +SWT +I GL NG +A F M + V
Sbjct: 165 VNGYCN---NGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGV 221
Query: 228 --ASTAMITGFCKQGKV----------------------DE------------------A 245
+ST ++ G K+ DE A
Sbjct: 222 GISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDA 281
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
+F + C+++ W ++TG N + EAL +FS+M+R + P++ F S +C L
Sbjct: 282 CKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGL 341
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
L++GR +A IK G ++ + N+LV MYSKCG I D+ F + ++VSWN++I
Sbjct: 342 EDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNSVI 401
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
AQH A F +M+ GV D IT LLS C R+G + ++ F +
Sbjct: 402 VGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSM 461
Query: 426 PPRSEHYACLVDVMSRAGQLQRA 448
EHYAC+VDV+ R G+++ A
Sbjct: 462 KLTVEHYACMVDVLGRCGEVEEA 484
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 87/199 (43%), Gaps = 29/199 (14%)
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM---VRTGMQPDDLI 294
K K+D A +F +I ++ + ++ YA N EA+NLF+Q+ + + + +I
Sbjct: 42 KNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVI 101
Query: 295 FVSLFTA--CASLALLDQGRQTYAL---VIKHGF-------------------DSDLSVN 330
S+ ++ L D+ Q ++ I HGF D D++
Sbjct: 102 KASIICNDFVTAVKLFDEMPQRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATW 161
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
NA+V Y G + D+ F Q D++SW +II ++ Y+A +F M VG
Sbjct: 162 NAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNM--VGFS 219
Query: 391 PDGITFLSLLSVCCRAGKI 409
GI+ +L+ A KI
Sbjct: 220 GVGISSTTLVCGLSAAAKI 238
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 147/471 (31%), Positives = 252/471 (53%), Gaps = 35/471 (7%)
Query: 15 PSSTARHTHFLLVFAK-----------HFSSY-DVYRANLNIAAFSRAGNITAARQVFDK 62
P ST HF L+++K HF+ Y +V+ N I A ++ A Q+FD+
Sbjct: 42 PHSTYLSNHFTLLYSKFGTFSNALTAFHFTGYPNVFSYNTIIHACAKHNLPNLAHQLFDE 101
Query: 63 MPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SWNAMVAGCVQNDMLDEA 118
+P DVV++N+++ + G + ++F + +V + + +++ V++ L
Sbjct: 102 IPEPDVVSYNTLIAVHARRGECGQAVSVFKEVREVGLVLDGFTLSGVISASVEDVGLVRQ 161
Query: 119 FNYFAAMPERN--AASYNAMISGFIKFGRLCDAQRLFKEMP--CPNVVSYTVMIDGYVKV 174
+ FA + + A+ NA+++ + + GRL +A R+F+EM C ++VS+ MI +
Sbjct: 162 LHCFALLCGYDCYASVCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVSWNAMIVACGQH 221
Query: 175 KEGGGIARARALFDAMPRRN-EVSWTVMINGLVENGLYEE---AWELFGRMPQKNVVAST 230
+EG A+A LF M R EV M + L ++ + G+M + ++
Sbjct: 222 REG---AKALRLFGEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQFHGKMIKSGFHRNS 278
Query: 231 AMITGF------CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGR-GEEALNLFSQM 283
+ +G C + E +F++I D+ WN MI+G++Q+ E+AL+ F +M
Sbjct: 279 HVGSGLIDLYSKCAPHGMLECMKVFEEIPKPDLVLWNTMISGFSQHEDLCEDALSSFREM 338
Query: 284 VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD-LSVNNALVTMYSKCGS 342
R G PDD FV + +AC++L+ G+Q +AL IK + +SVNNA V MYSKCG+
Sbjct: 339 QRVGFCPDDCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVNNAFVAMYSKCGN 398
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ D+ F + + VS N++IA +AQH ++ F+ M+ + P+ ITF+S+LS
Sbjct: 399 LHDARRIFDTMPEQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIVPNNITFISVLSA 458
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
C GK+DE FN+M +GI P +EHY+C++D++ RAG+L +A II
Sbjct: 459 CAHTGKVDEGEKYFNMMKEKFGIEPEAEHYSCMIDLLGRAGKLNKAERIIE 509
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 10/196 (5%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N +A +S+ GN+ AR++FD MP ++ V+ NSM+ Y G S LF+ M + +V
Sbjct: 387 NAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIV 446
Query: 101 SWN----AMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQR 151
N ++++ C +DE YF M E+ A Y+ MI + G+L A+R
Sbjct: 447 PNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGIEPEAEHYSCMIDLLGRAGKLNKAER 506
Query: 152 LFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
+ + MP P + + ++ K +A F + N + ++ N
Sbjct: 507 IIETMPFDPGSIEWAALLGACKKHGNVELAVKAANKFLQLEPYNAAPYVMLSNVYASANR 566
Query: 211 YEEAWELFGRMPQKNV 226
+EEA + M ++ V
Sbjct: 567 WEEAATVKRLMRERGV 582
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
F +L C + G+ +A IK ++N +YSK G+ ++ AF T
Sbjct: 13 FRTLLKQCITQKDFLTGKTLHAFYIKSFIPHSTYLSNHFTLLYSKFGTFSNALTAFHFTG 72
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
P++ S+NTII A A+H L A FD++ PD +++ +L++V R G+ ++++
Sbjct: 73 YPNVFSYNTIIHACAKHNLPNLAHQLFDEI----PEPDVVSYNTLIAVHARRGECGQAVS 128
Query: 415 LFN 417
+F
Sbjct: 129 VFK 131
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 225 bits (573), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 209/429 (48%), Gaps = 51/429 (11%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM----PE 127
NS++ AY+ G + + LFD + +VVSWN+M+ GCV N F M E
Sbjct: 509 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 568
Query: 128 RNAASYNAMISGFIKFGRLCDAQRL--FKEMPC--PNVVSYTVMIDGYVKVKEGGGIARA 183
+ + +++ + G L + L F C VV ++D Y K G + A
Sbjct: 569 VDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKC---GNLNGA 625
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------------- 224
+F M VSWT I V GLY +A LF M K
Sbjct: 626 TEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACS 685
Query: 225 --------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
N+ + A+I + K G V+EA +F +I +DI SWN MI
Sbjct: 686 SSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMI 745
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
GY+QN EAL LF M + +PDD+ + ACA LA LD+GR+ + +++ G+
Sbjct: 746 GGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF 804
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
SDL V ALV MY+KCG +V ++L F + D++SW +IA + H +A S F++M
Sbjct: 805 SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEM 864
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
G+ PD +F +L+ C +G ++E FN M ++ G+ P+ EHYAC+VD+++R G
Sbjct: 865 RIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGN 924
Query: 445 LQRACEIIR 453
L +A + I
Sbjct: 925 LSKAYKFIE 933
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 126/433 (29%), Positives = 198/433 (45%), Gaps = 57/433 (13%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
+ G++ R++FDK+ V WN +++ Y G + S +LF M VV N
Sbjct: 414 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG-NCYT 472
Query: 107 AGCVQNDMLDEAFNYFAAMPE-----------------RNAASYNAMISGFIKFGRLCDA 149
CV FAA+ + N A N++I+ + KFG + A
Sbjct: 473 FTCV--------LKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESA 524
Query: 150 QRLFKEMPCPNVVSYTVMIDG-YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
LF E+ P+VVS+ MI+G V G G+ + EV T +++ LV
Sbjct: 525 HNLFDELSEPDVVSWNSMINGCVVNGFSGNGL---EIFIQMLILGVEVDLTTLVSVLV-- 579
Query: 209 GLYEEAWELFGRMP--------------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
AW G + + VV S ++ + K G ++ A +F ++
Sbjct: 580 -----AWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD 634
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
I SW I Y + G +A+ LF +M G++PD S+ ACA + LD+GR
Sbjct: 635 TTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 694
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
++ VIK+G S+L V NAL+ MY+KCGS+ ++ L F + DIVSWNT+I ++Q+ L
Sbjct: 695 HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLP 754
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF-NLMVHDYGIPPRSEHYA 433
+A F M +PD IT +L C +D+ + +++ Y H A
Sbjct: 755 NEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF---SDLHVA 810
Query: 434 C-LVDVMSRAGQL 445
C LVD+ ++ G L
Sbjct: 811 CALVDMYAKCGLL 823
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 153/317 (48%), Gaps = 12/317 (3%)
Query: 140 FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNE 195
++ G L +++F ++ V + +++ Y K+ G + +LF M + N
Sbjct: 414 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKI---GNFRESVSLFKKMQKLGVVGNC 470
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQ 251
++T ++ G +E + G + + N ++I + K G V+ A LF +
Sbjct: 471 YTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE 530
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+ D+ SWN MI G NG L +F QM+ G++ D VS+ A A++ L G
Sbjct: 531 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLG 590
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
R + +K F ++ +N L+ MYSKCG++ + F + IVSW + IAA+ +
Sbjct: 591 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVRE 650
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
LY A FD+M + GVRPD T S++ C + +D+ ++ + ++ + G+
Sbjct: 651 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN-GMGSNLPV 709
Query: 432 YACLVDVMSRAGQLQRA 448
L+++ ++ G ++ A
Sbjct: 710 TNALINMYAKCGSVEEA 726
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 173/355 (48%), Gaps = 20/355 (5%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +V +N + +S+ GN+ A +VF KM +V+W S + AY G + LFD
Sbjct: 603 SEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDE 662
Query: 94 MPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIKFGR 145
M K ++ + ++V C + LD+ + + + + S NA+I+ + K G
Sbjct: 663 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 722
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR---NEVSWTVMI 202
+ +A+ +F ++P ++VS+ MI GY + A LF M ++ ++++ ++
Sbjct: 723 VEEARLVFSKIPVKDIVSWNTMIGGY---SQNSLPNEALELFLDMQKQFKPDDITMACVL 779
Query: 203 NGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
++ E+ G + ++ ++ + A++ + K G + A LF I +D+
Sbjct: 780 PACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLI 839
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-AL 317
SW +MI GY +G G EA++ F++M G++PD+ F + AC+ LL++G + + ++
Sbjct: 840 SWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSM 899
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ G + L +V + ++ G++ + + +PD W +++ H
Sbjct: 900 RNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIH 954
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 261 NIMITGYAQNGRGEEALNLF--SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
N I + + G A+ L S+ G+ + S+ CA L+ G++ ++++
Sbjct: 340 NAKINKFCEMGDLRNAIELLTKSKSYELGLNS----YCSVLQLCAEKKSLEDGKRVHSVI 395
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
I +G D ++ LV MY CG +V F + + WN +++ +A+ + ++
Sbjct: 396 ISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESV 455
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
S F +M +GV + TF +L GK+ E
Sbjct: 456 SLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE 488
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 139/429 (32%), Positives = 210/429 (48%), Gaps = 51/429 (11%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM----PE 127
NS++ AY+ G + + LFD + +VVSWN+M+ GCV N F M E
Sbjct: 234 NSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 293
Query: 128 RNAASYNAMISGFIKFGRLCDAQRL--FKEMPC--PNVVSYTVMIDGYVKVKEGGGIARA 183
+ + +++ G L + L F C VV ++D Y K G + A
Sbjct: 294 VDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKC---GNLNGA 350
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------------- 224
+F M VSWT +I V GLY +A LF M K
Sbjct: 351 TEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACS 410
Query: 225 --------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
N+ + A+I + K G V+EA +F +I +DI SWN MI
Sbjct: 411 SSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMI 470
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
GY+QN EAL LF M + +PDD+ + ACA LA LD+GR+ + +++ G+
Sbjct: 471 GGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF 529
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
SDL V ALV MY+KCG +V ++L F + D++SW +IA + H +A S F++M
Sbjct: 530 SDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEM 589
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
G+ PD +F ++L+ C +G ++E FN M ++ G+ P+ EHYAC+VD+++R G
Sbjct: 590 RIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGN 649
Query: 445 LQRACEIIR 453
L +A + I
Sbjct: 650 LSKAYKFIE 658
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/425 (29%), Positives = 198/425 (46%), Gaps = 41/425 (9%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
+ G++ R++FDK+ V WN +++ Y G + S +LF M VV N
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG-NCYT 197
Query: 107 AGCVQNDMLDEAFNYFAAMPE-----------------RNAASYNAMISGFIKFGRLCDA 149
CV FAA+ + N A N++I+ + KFG + A
Sbjct: 198 FTCV--------LKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESA 249
Query: 150 QRLFKEMPCPNVVSYTVMIDG-YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE- 207
LF E+ P+VVS+ MI+G V G G+ + EV T +++ LV
Sbjct: 250 HNLFDELSEPDVVSWNSMINGCVVNGFSGNGL---EIFIQMLILGVEVDLTTLVSVLVAC 306
Query: 208 ----NGLYEEAWELFGRMP--QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
N A FG + VV S ++ + K G ++ A +F ++ I SW
Sbjct: 307 ANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWT 366
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
+I Y + G +A+ LF +M G++PD S+ ACA + LD+GR ++ VIK+
Sbjct: 367 SIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN 426
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
G S+L V NAL+ MY+KCGS+ ++ L F + DIVSWNT+I ++Q++L +A F
Sbjct: 427 GMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELF 486
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC-LVDVMS 440
M +PD IT +L C +D+ + ++ H AC LVD+ +
Sbjct: 487 LDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDL--HVACALVDMYA 543
Query: 441 RAGQL 445
+ G L
Sbjct: 544 KCGLL 548
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 155/317 (48%), Gaps = 12/317 (3%)
Query: 140 FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV--- 196
++ G L +++F ++ V + +++ Y K+ G + +LF M + V
Sbjct: 139 YVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKI---GNFRESVSLFKKMQKLGVVGNC 195
Query: 197 -SWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQ 251
++T ++ G +E + G + + N ++I + K G V+ A LF +
Sbjct: 196 YTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE 255
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+ D+ SWN MI G NG L +F QM+ G++ D VS+ ACA++ L G
Sbjct: 256 LSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLG 315
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
R + +K F ++ +N L+ MYSKCG++ + F + IVSW +IIAA+ +
Sbjct: 316 RALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVRE 375
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
LY A FD+M + GVRPD T S++ C + +D+ ++ + ++ + G+
Sbjct: 376 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKN-GMGSNLPV 434
Query: 432 YACLVDVMSRAGQLQRA 448
L+++ ++ G ++ A
Sbjct: 435 TNALINMYAKCGSVEEA 451
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 175/355 (49%), Gaps = 20/355 (5%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +V +N + +S+ GN+ A +VF KM +V+W S++ AY G + LFD
Sbjct: 328 SEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDE 387
Query: 94 MPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIKFGR 145
M K ++ + ++V C + LD+ + + + + S NA+I+ + K G
Sbjct: 388 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS 447
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR---NEVSWTVMI 202
+ +A+ +F ++P ++VS+ MI GY + A LF M ++ ++++ ++
Sbjct: 448 VEEARLVFSKIPVKDIVSWNTMIGGY---SQNLLPNEALELFLDMQKQFKPDDITMACVL 504
Query: 203 NGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
++ E+ G + ++ ++ + A++ + K G + A LF I +D+
Sbjct: 505 PACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLI 564
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-AL 317
SW +MI GY +G G EA++ F++M G++PD+ F ++ AC+ LL++G + + ++
Sbjct: 565 SWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSM 624
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ G + L +V + ++ G++ + + +PD W +++ H
Sbjct: 625 RNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIH 679
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 261 NIMITGYAQNGRGEEALNLF--SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
N I + + G A+ L S+ G+ + S+ CA L+ G++ ++++
Sbjct: 65 NAKINKFCEMGDLRNAIELLTKSKSYELGLNS----YCSVLQLCAEKKSLEDGKRVHSVI 120
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
I +G D ++ LV MY CG +V F + + WN +++ +A+ + ++
Sbjct: 121 ISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESV 180
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
S F +M +GV + TF +L GK+ E
Sbjct: 181 SLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE 213
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 236/468 (50%), Gaps = 49/468 (10%)
Query: 35 YDVYRANL-----NIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
+D+ R +L I +S+ A Q+F++MP +D V+WN++++ + GF A
Sbjct: 205 FDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLA 264
Query: 90 LFDAMPMK----NVVSWNAMVAGCVQN-----------------------------DM-- 114
+F M + N +++ ++++ C DM
Sbjct: 265 MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYA 324
Query: 115 ----LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDG 170
LD A F ++ E + S+N++I+G + FG DA LF +M +VV ++
Sbjct: 325 KCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPT 384
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTV-----MINGLVENGLYEEAWELFGRMPQKN 225
+ V G A L ++ + + +I + G ++A +F MP +N
Sbjct: 385 ILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRN 444
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
++ TAMIT F + G + +A F + R+I +WN M++ Y QNG EE L L+ M
Sbjct: 445 TISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRS 504
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
G+QPD + F + ACA LA++ G Q K G ++SV N++VTMYS+CG I +
Sbjct: 505 NGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKE 564
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
++ F D++SWN ++AAFAQ+ L K F+ M+ +P+ I+++S+LS C
Sbjct: 565 AKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSH 624
Query: 406 AGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G + E + F+ M +GI P +EH++C+VD++ RAG L++A ++I
Sbjct: 625 MGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIE 672
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 199/465 (42%), Gaps = 92/465 (19%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP--MKNVVSWNA 104
+S G A QVF + +++ TWN+M+ A S + LFD MP +K+ VSW
Sbjct: 53 YSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTT 112
Query: 105 MVAGCVQNDMLDEAFNYFAAM---------------------------PERNAASYNAMI 137
M++G QN +F F+ M R A +A++
Sbjct: 113 MISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALV 172
Query: 138 SG----------------FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
S ++K G + A+ +F ++ P++ + MI GY ++ G
Sbjct: 173 SKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMY---GPY 229
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----------------- 224
+A +F+ MP R+EVSW +I+ ++G + +F M +
Sbjct: 230 KALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACA 289
Query: 225 ----------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
++V +I + K G +D A +F+ +R D SWN
Sbjct: 290 STSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNS 349
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+ITG G GE+AL LF+QM R+ + D+ I ++ C+ G + IK G
Sbjct: 350 LITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSG 409
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
S V NA++TMY+KCG ++L F + +SW +I AF++ KAR YFD
Sbjct: 410 MGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFD 469
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
M + +T+ S+LS + G +E + L+ M + G+ P
Sbjct: 470 MMPERNI----VTWNSMLSTYVQNGFSEEGLKLYVSMRSN-GVQP 509
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +V AN + +SR G I A+ FD + KD+++WN+ML A+ +G F+
Sbjct: 543 SLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFED 602
Query: 94 MPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS-----YNAMISGFIKFG 144
M N +S+ ++++GC ++ E +YF +M S ++ M+ + G
Sbjct: 603 MLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAG 662
Query: 145 RLCDAQRLFKEMPC-PNVVSYTVMI 168
L A+ L + MP PN ++ ++
Sbjct: 663 LLEQAKDLIEGMPFKPNATVWSALL 687
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
R+ +A +I G DS L + N L+ MYS CG D+ F +T +I +WNT+I A
Sbjct: 28 RKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSS 87
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
A FD+M V V+ D +++ +++S + G S F+LM+ D ++
Sbjct: 88 SRMSDAEKLFDEM-PVRVK-DSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYD 145
Query: 432 YACLVDVMSRAGQL 445
VM G L
Sbjct: 146 PFSFTSVMKACGSL 159
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 134/469 (28%), Positives = 231/469 (49%), Gaps = 56/469 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+ N + + + G++ A++VF ++P K+ +WN+++ Y G + LFD MP
Sbjct: 139 DIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMP 198
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
++VSWN+++AG V N A + + M + +K D L +E
Sbjct: 199 EPDIVSWNSIIAGLVDNAS-SRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGRE 257
Query: 156 MPCPNVVS--------YTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMI 202
+ C + S + +ID Y K ++ A +FD R + VS W M+
Sbjct: 258 IHCYIIKSGFESSCYCISALIDMYSSCKL---LSEATKIFDQYFRNSSVSESLALWNSML 314
Query: 203 NGLVENGLYEEAWELFGRMPQKNV------------------------------------ 226
+G V NG Y EA + M + V
Sbjct: 315 SGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYE 374
Query: 227 ---VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
V + +I + KQG ++ A LF+++ +D+ +W+ +ITG A+ G + A +LF M
Sbjct: 375 LDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDM 434
Query: 284 VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSI 343
+ G+Q D + + AC+SLA G+Q ++L +K G++S+ V AL+ MY+KCG I
Sbjct: 435 IHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDI 494
Query: 344 VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
D+ FG S+ D +SW +II AQ+ +A S +MI G +P+ IT L +L+ C
Sbjct: 495 EDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTAC 554
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+G ++E+ ++FN + ++G+ P EHY C+VD++ +AG+ + A ++I
Sbjct: 555 RHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLI 603
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 217/497 (43%), Gaps = 70/497 (14%)
Query: 9 IALKPTPSSTARHTHFLLV-FAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKD 67
I + ++ + H+H + F H ++ N I+ +S+ +I AR +FD+MP ++
Sbjct: 14 IRFRSIKNAKSLHSHIIKSGFCNH-----IFILNNMISVYSKCSSIIDARNMFDEMPHRN 68
Query: 68 VVTWNSMLTAYWHSGFPQHSRALFDAM-----PMKNVVSWNAMVAGC------------- 109
+V+W +M++ +S P + +L++ M N ++A++ C
Sbjct: 69 IVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVH 128
Query: 110 -------------VQNDMLD---------EAFNYFAAMPERNAASYNAMISGFIKFGRLC 147
+ N +LD +A F +P +NA S+N +I G+ K G +
Sbjct: 129 YHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLID 188
Query: 148 DAQRLFKEMPCPNVVSYTVMIDG-----------YVKVKEGGGIARARALFDAMPRRNEV 196
DA +LF +MP P++VS+ +I G +V + G G+ F ++ +
Sbjct: 189 DAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGC 248
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQI---- 252
S +M+ + + + +E + +A+I + + EA +F Q
Sbjct: 249 SDELMLGREIHCYIIKSGFE-------SSCYCISALIDMYSSCKLLSEATKIFDQYFRNS 301
Query: 253 -RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+A WN M++G+ NG EAL++ S M R+G++ D F + C + L
Sbjct: 302 SVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLA 361
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
Q + VI G++ D V + L+ +Y+K GSI ++ F + D+V+W+++I A+
Sbjct: 362 SQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARF 421
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
A S F MI +G++ D +L C + +L + G
Sbjct: 422 GSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKK-GYESEGVV 480
Query: 432 YACLVDVMSRAGQLQRA 448
L+D+ ++ G ++ A
Sbjct: 481 TTALIDMYAKCGDIEDA 497
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 169/417 (40%), Gaps = 87/417 (20%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRAL 90
+D Y ++ + N++ A QV + T D V + ++ Y G ++ L
Sbjct: 340 FDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRL 399
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIK-------- 142
F+ +P K+VV+W++++ GC + AF+ F M + +IS +K
Sbjct: 400 FERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASH 459
Query: 143 -FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
G+ + L K VV+ T +ID Y K G I A +LF + + +SWT +
Sbjct: 460 QHGKQVHSLCLKKGYESEGVVT-TALIDMYAKC---GDIEDALSLFGCLSEIDTMSWTSI 515
Query: 202 INGLVENGLYEEAWELFGRMPQKNVVASTAMITGF---CKQ-GKVDEAWTLFQQIR---- 253
I G +NG EEA L +M + + I G C+ G V+EAW +F I
Sbjct: 516 IVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHG 575
Query: 254 ---CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
C + +N M+ Q GR EEA+ L S+M +PD I+ SL AC + +
Sbjct: 576 LIPCPE--HYNCMVDILGQAGRFEEAVKLISEM---PFKPDKTIWSSLLGACGTY----K 626
Query: 311 GRQTYALVIKHGFDS---DLSVNNALVTMYSKCGSIVDS--------------------- 346
R +V +H + D+SV L +Y+ G + DS
Sbjct: 627 NRDLANIVAEHLLATSPEDVSVYIMLSNVYAALG-MWDSVSKVRETVKKIGKKRAGKIFY 685
Query: 347 ----------ELAFGQTSQ---------------PDIVSWNTIIAAFAQHVLYYKAR 378
L G Q PD+VSWN +IA A + Y+ +
Sbjct: 686 EIPFKFYFMEHLHLGHAKQGLNGGVVKVIYPILEPDLVSWNNVIAGLADNASPYEMQ 742
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDI 358
F C + + ++ +IK GF + + + N ++++YSKC SI+D+ F + +I
Sbjct: 10 FRYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNI 69
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGV-RPDGITFLSLLSVC 403
VSW T+++ + ++A S +++MI + +P+ + ++L C
Sbjct: 70 VSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKAC 115
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 222 bits (565), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 220/404 (54%), Gaps = 12/404 (2%)
Query: 59 VFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SWNAMVAGC--VQN 112
VF+++ WN+ + + S F + + F M + V ++ +++ C
Sbjct: 71 VFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCK 130
Query: 113 DMLDEAFN--YFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDG 170
++ ++ + F +++ +I + K G++ DA+++F E+ NVVS+T M+ G
Sbjct: 131 VLVGKSVHGSVFRCGLDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVG 190
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST 230
YV G + +A+ +FD MP RN SW MI G V+ G A +F MP+KNVV+ T
Sbjct: 191 YVT---AGDVVKAKKVFDGMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFT 247
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
M+ G+ K G ++ + LF+Q +D+ +W+ +I+GY QNG EAL +F +M + P
Sbjct: 248 TMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEMESMNVIP 307
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFD-SDLSVNNALVTMYSKCGSIVDSELA 349
D+ + V L +A + L L ++ + V + D V +ALV M +KCG++ +
Sbjct: 308 DEFVLVGLMSAASQLGDLKLAQRVDSYVGNNSIDLQKDHVISALVDMNAKCGNMERALKL 367
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
F + + D+VS+ ++I F+ H A + F++M+ G+ PD F +L+ C +G I
Sbjct: 368 FQEMPERDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLI 427
Query: 410 DESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
D+ FN M +YGI P +H+AC+VD++ R+GQL+ A E+I+
Sbjct: 428 DKGWKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIK 471
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 183/344 (53%), Gaps = 16/344 (4%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ I + + G I+ AR+VF+++ ++VV+W +M+ Y +G ++ +FD MP
Sbjct: 149 DLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWTAMVVGYVTAGDVVKAKKVFDGMP 208
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
++NV SWNAM+ G V+ L A F +MPE+N S+ M+ G+ K G + ++ LF++
Sbjct: 209 LRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMVDGYAKAGDMESSRFLFEQ 268
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
+VV+++ +I GYV + G A +F M N + ++ GL+
Sbjct: 269 AAEKDVVTWSALISGYV---QNGEANEALKVFLEMESMNVIPDEFVLVGLMSAASQLGDL 325
Query: 216 ELFGRMP----------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
+L R+ QK+ V S A++ K G ++ A LFQ++ RD+ S+ MI
Sbjct: 326 KLAQRVDSYVGNNSIDLQKDHVIS-ALVDMNAKCGNMERALKLFQEMPERDLVSYCSMIH 384
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFD 324
G++ +G GE+A+NLF++M+ G+ PD+ F + TAC+ L+D+G + + ++ +G
Sbjct: 385 GFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLIDKGWKYFNSMEENYGIS 444
Query: 325 SDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAA 367
+V + + G + D+ EL +P+ +W +I A
Sbjct: 445 PTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGA 488
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 223/413 (53%), Gaps = 16/413 (3%)
Query: 53 ITAARQVFDKMPTK--DVVTWNSMLTAYW-----HSGFPQHSRALFDAMPMKNVVSWNAM 105
+ AR F+ P D N+++ A++ + GF +++ D + ++ +
Sbjct: 70 VQHARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTFTLI 129
Query: 106 VAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNV 161
+ GC +D + F + + + +++ ++KFG + A+++F EM ++
Sbjct: 130 LKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSL 189
Query: 162 VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM 221
VS+T +I GY + G + AR LFD M R+ ++ VMI+G V+ G + A +LF +M
Sbjct: 190 VSWTAVIVGYARC---GDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFDKM 246
Query: 222 PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
KNV++ T+M+ G+ + G VDEA LF + +++ SWN MI GY QNGR +AL LF
Sbjct: 247 RVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFC 306
Query: 282 QMV-RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
+M ++ +++ VS+ A A L+ LD G + V ++ D + V NALV MY+KC
Sbjct: 307 EMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKC 366
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
G I ++L F + ++ D SWN +I + + +A F M+ G P+ IT S+L
Sbjct: 367 GEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVL 426
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
S C G ++E F M +GI P+ EHY C++D++ RAG+L A ++I+
Sbjct: 427 SACNHCGLVEEGRRCFEAM-ERFGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQ 478
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 167/396 (42%), Gaps = 81/396 (20%)
Query: 3 SSIIVSIALKPTPSSTARHTHFLL--VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVF 60
SS ++ LK S A+ F + V K++ D+Y + + + G++ AR+VF
Sbjct: 122 SSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVF 181
Query: 61 DKMPTKDVVTW-------------------------------NSMLTAYWHSGFPQHSRA 89
D+M + +V+W N M+ Y G +R
Sbjct: 182 DEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARD 241
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
LFD M +KNV+SW +MV G ++ +DEA F MPE+N S+NAMI G+ + GR DA
Sbjct: 242 LFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDA 301
Query: 150 QRLFKEMP---------------CPNVVSYTVM--------------IDGYVKV------ 174
+LF EM P V + + +DG V V
Sbjct: 302 LKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVD 361
Query: 175 --KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVA 228
+ G I +A+ +F+ M ++ SW +ING NG +EA E+F M ++ N +
Sbjct: 362 MYAKCGEIGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQIT 421
Query: 229 STAMITGFCKQGKVDEAWTLFQQIR----CRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
T++++ G V+E F+ + I + MI + GR +EA L M
Sbjct: 422 MTSVLSACNHCGLVEEGRRCFEAMERFGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAM- 480
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
P+++I S AC + + + + +K
Sbjct: 481 --PYDPNEIILTSFLFACCYFEDVSRAERILKVAVK 514
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 221/436 (50%), Gaps = 54/436 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D+V +S++ Y + + LFD MP K+V WN +++ Q+ +EA YF M
Sbjct: 140 DIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMR 199
Query: 127 ----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK------E 176
E ++ + IS + L + + KE+ V+ +D +V +
Sbjct: 200 RFGFEPDSVTITTAISSCARLLDLDRGREIHKEL-----VNSGFRMDSFVSAALVDMYGK 254
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM--------------- 221
G + A +F+ MP + V+W MING G +LF RM
Sbjct: 255 CGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTST 314
Query: 222 ------------------------PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
Q ++ +++++ + K GKV+ A T+F+ +
Sbjct: 315 LMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTT 374
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SWN+MI+GY G+ +AL LF +M ++ ++PD + F S+ AC+ LA L++GR+ + L
Sbjct: 375 VSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNL 434
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+++ ++ V AL+ MY+KCG++ ++ F + D+VSW ++I A+ H Y+A
Sbjct: 435 IVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEA 494
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
F +M+ V+PD +TFL++LS C AG +D+ + FN M++ YGI PR EHY+CL+
Sbjct: 495 LELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLIT 554
Query: 438 VMSRAGQLQRACEIIR 453
++ RAG+L A EI++
Sbjct: 555 LLGRAGRLHEAYEILQ 570
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 191/431 (44%), Gaps = 53/431 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSW-NAMVAGCVQNDMLDEAFNYFAAM 125
DV ++++ Y +++ +FD + +S N ++AG +N M DEA F +
Sbjct: 37 DVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKL 96
Query: 126 -----PERNAASYNAMISGFIKFGRLCDAQR----LFKEMPCPNVVSYTVMIDGYVKVKE 176
+ ++ +Y +++ R+ Q L KE ++V + ++ Y K E
Sbjct: 97 MCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNE 156
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ------------- 223
A LFD MP ++ W +I+ ++G +EEA FG M +
Sbjct: 157 ---FECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTA 213
Query: 224 -----------------KNVV---------ASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
K +V S A++ + K G+++ A +F+Q+ + +
Sbjct: 214 ISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTV 273
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+WN MI GY G G + LF +M G++P S AC+ A L +G+ +
Sbjct: 274 VAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGY 333
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+I++ D+ +N++L+ +Y KCG + +E F + VSWN +I+ + + A
Sbjct: 334 IIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDA 393
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
F +M V PD ITF S+L+ C + +++ + NL+V + + L+D
Sbjct: 394 LRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIV-ERNLGNNEVVMGALLD 452
Query: 438 VMSRAGQLQRA 448
+ ++ G ++ A
Sbjct: 453 MYAKCGAVEEA 463
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 3/233 (1%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-DIASWNIMITGYAQNGRGEEALNLFS 281
Q +V +I+ + D A +F I +I+ N ++ GY +N +EAL LF
Sbjct: 35 QNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFD 94
Query: 282 Q-MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
+ M ++PD + S+ AC L + G+ + ++K G D+ V ++LV MY+KC
Sbjct: 95 KLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKC 154
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
+ F + D+ WNT+I+ + Q + +A YF M G PD +T + +
Sbjct: 155 NEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAI 214
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
S C R +D + +V+ G S A LVD+ + GQL+ A E+
Sbjct: 215 SSCARLLDLDRGREIHKELVNS-GFRMDSFVSAALVDMYGKCGQLEMAIEVFE 266
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 221/436 (50%), Gaps = 54/436 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D+V +S++ Y + + LFD MP K+V WN +++ Q+ +EA YF M
Sbjct: 140 DIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMR 199
Query: 127 ----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK------E 176
E ++ + IS + L + + KE+ V+ +D +V +
Sbjct: 200 RFGFEPDSVTITTAISSCARLLDLDRGREIHKEL-----VNSGFRMDSFVSAALVDMYGK 254
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM--------------- 221
G + A +F+ MP + V+W MING G +LF RM
Sbjct: 255 CGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTST 314
Query: 222 ------------------------PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
Q ++ +++++ + K GKV+ A T+F+ +
Sbjct: 315 LMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTT 374
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SWN+MI+GY G+ +AL LF +M ++ ++PD + F S+ AC+ LA L++GR+ + L
Sbjct: 375 VSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNL 434
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+++ ++ V AL+ MY+KCG++ ++ F + D+VSW ++I A+ H Y+A
Sbjct: 435 IVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEA 494
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
F +M+ V+PD +TFL++LS C AG +D+ + FN M++ YGI PR EHY+CL+
Sbjct: 495 LELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLIT 554
Query: 438 VMSRAGQLQRACEIIR 453
++ RAG+L A EI++
Sbjct: 555 LLGRAGRLHEAYEILQ 570
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 191/431 (44%), Gaps = 53/431 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSW-NAMVAGCVQNDMLDEAFNYFAAM 125
DV ++++ Y +++ +FD + +S N ++AG +N M DEA F +
Sbjct: 37 DVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKL 96
Query: 126 -----PERNAASYNAMISGFIKFGRLCDAQR----LFKEMPCPNVVSYTVMIDGYVKVKE 176
+ ++ +Y +++ R+ Q L KE ++V + ++ Y K E
Sbjct: 97 MCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNE 156
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ------------- 223
A LFD MP ++ W +I+ ++G +EEA FG M +
Sbjct: 157 ---FECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTA 213
Query: 224 -----------------KNVV---------ASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
K +V S A++ + K G+++ A +F+Q+ + +
Sbjct: 214 ISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTV 273
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+WN MI GY G G + LF +M G++P S AC+ A L +G+ +
Sbjct: 274 VAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGY 333
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+I++ D+ +N++L+ +Y KCG + +E F + VSWN +I+ + + A
Sbjct: 334 IIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDA 393
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
F +M V PD ITF S+L+ C + +++ + NL+V + + L+D
Sbjct: 394 LRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIV-ERNLGNNEVVMGALLD 452
Query: 438 VMSRAGQLQRA 448
+ ++ G ++ A
Sbjct: 453 MYAKCGAVEEA 463
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 110/233 (47%), Gaps = 3/233 (1%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-DIASWNIMITGYAQNGRGEEALNLFS 281
Q +V +I+ + D A +F I +I+ N ++ GY +N +EAL LF
Sbjct: 35 QNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFD 94
Query: 282 Q-MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
+ M ++PD + S+ AC L + G+ + ++K G D+ V ++LV MY+KC
Sbjct: 95 KLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKC 154
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
+ F + D+ WNT+I+ + Q + +A YF M G PD +T + +
Sbjct: 155 NEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAI 214
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
S C R +D + +V+ G S A LVD+ + GQL+ A E+
Sbjct: 215 SSCARLLDLDRGREIHKELVNS-GFRMDSFVSAALVDMYGKCGQLEMAIEVFE 266
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 214/415 (51%), Gaps = 24/415 (5%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
AN + + ++G+ + VFD+M +D TWN M++ + SG + ALFD M +++
Sbjct: 180 ANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDI 239
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
+SWN+++AG +A F+ M ++ + G + L L
Sbjct: 240 ISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSV----LSACANLESLKLGK 295
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG 219
+ +Y V D + G + A A EV+ T++ EL G
Sbjct: 296 QIHAYIVRAD----IDISGAVGNALISMYAKSGAVEVARTIV--------------ELRG 337
Query: 220 RMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNL 279
NV+A T+++ G+ K G V+ A +F ++CRD+ +W MI GYAQN ++AL L
Sbjct: 338 -TSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALEL 396
Query: 280 FSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSK 339
F M+ G +P+ ++ + +SLA LD G+Q +A+ I+ S +SV NAL+TMYSK
Sbjct: 397 FRLMISEGPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALITMYSK 456
Query: 340 CGSIVDSELAFGQT-SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
G I D+ F Q ++ D ++W ++I A AQH L +A F+ M+ ++PD IT++
Sbjct: 457 SGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVG 516
Query: 399 LLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+LS C G +++ FNLM + + I P HYAC++D+ RAG ++ A I+
Sbjct: 517 VLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYACMIDLFGRAGLIEEAYNFIK 571
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 216/484 (44%), Gaps = 79/484 (16%)
Query: 10 ALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVV 69
A+K + T R H ++ KH V+ N + +S+ + A ++F +MP +
Sbjct: 20 AIKSRDTVTGRFIHARII--KHGLHLSVFLMNNLLNFYSKTASFNDAHRLFSEMPQRTTF 77
Query: 70 TWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN 129
+WN++L++Y G + +R LFD +P + VSW M+ G Q + A + F M
Sbjct: 78 SWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAIHTFQQMISDG 137
Query: 130 AA----SYNAMISGFIKFGRLCDAQRLFK---EMPCPNVVSY-TVMIDGYVKVKEGGGIA 181
++ +++ + G L +++ ++ VV +++ YVK G
Sbjct: 138 ILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMYVK---SGDSL 194
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
R +A+FD M R++ +W +MI+ +++G ++ A LF +M +++++ ++I G+C Q
Sbjct: 195 RVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQ-- 252
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR-TGMQPDDLIFVSLFT 300
G +AL FS M R + ++PD S+ +
Sbjct: 253 -----------------------------GYDSKALETFSDMFRSSSLKPDKFTLGSVLS 283
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG------------------- 341
ACA+L L G+Q +A +++ D +V NAL++MY+K G
Sbjct: 284 ACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINV 343
Query: 342 ----SIVDSELAFGQTSQP----------DIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
S+++ + G + D+V+W +I +AQ+ L A F MI+
Sbjct: 344 IAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRLMISE 403
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G RP+ T ++LSV +D L + + + S A L+ + S++G ++
Sbjct: 404 GPRPNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNA-LITMYSKSGCIKD 462
Query: 448 ACEI 451
A ++
Sbjct: 463 ARKV 466
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 145/310 (46%), Gaps = 44/310 (14%)
Query: 26 LVFAKHFSSYDVYRANLNIAA---------FSRAGNITAARQVFDKMPTKD--VVTWNSM 74
L K +Y + RA+++I+ ++++G + AR + + T + V+ + S+
Sbjct: 291 LKLGKQIHAY-IVRADIDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSL 349
Query: 75 LTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNA 130
L Y G +R +FD++ ++VV+W AM+ G QN +L +A F M P N+
Sbjct: 350 LNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNS 409
Query: 131 ASYNAMISGFIKFGRLCDAQRL------FKEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
+ A++S F L ++L KE+ +V + +I Y K G I AR
Sbjct: 410 YTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGN--ALITMYSK---SGCIKDAR 464
Query: 185 ALFDAM-PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV---------VASTAMIT 234
+F+ + R+ ++WT MI L ++GL EA ELF M + N+ V S
Sbjct: 465 KVFNQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHITYVGVLSACTHV 524
Query: 235 GFCKQGKVDEAWTLFQQIRCRDI--ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
G +QGK + L + + + + + MI + + G EEA N M ++PD
Sbjct: 525 GLVEQGK--RYFNLMKNVHHIEPTHSHYACMIDLFGRAGLIEEAYNFIKTM---PIEPDG 579
Query: 293 LIFVSLFTAC 302
+ + SL +AC
Sbjct: 580 IAWGSLLSAC 589
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 222/456 (48%), Gaps = 65/456 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + I A+S GN+ AR VFD + KD+V+W M+ Y + F + S LF+ M
Sbjct: 170 DAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMR 229
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
+ N ++G +++ + EAFN + + + G C LF
Sbjct: 230 IMGYKPNNFTISGALKSCLGLEAFNV-------GKSVHGCALKG-------CYDHDLFVG 275
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
+ +++ Y K G I A+ LF+ MP+ + + W++MI ++ +EA
Sbjct: 276 IA---------LLELYAK---SGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEAL 323
Query: 216 ELFGRMPQ---------------------------------------KNVVASTAMITGF 236
+LF RM Q NV S A++ +
Sbjct: 324 DLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVY 383
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
K G+++ + LF+++ R+ +WN +I GY Q G GE A+NLF+ M+ MQP ++ +
Sbjct: 384 AKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYS 443
Query: 297 SLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP 356
S+ A ASLA L+ G Q ++L IK ++ D V N+L+ MY+KCG I D+ L F + ++
Sbjct: 444 SVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKR 503
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
D VSWN +I ++ H + +A + FD M +P+ +TF+ +LS C AG + + F
Sbjct: 504 DEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHF 563
Query: 417 NLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
M DY I P EHY C+V ++ R G+ A ++I
Sbjct: 564 ESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLI 599
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 189/410 (46%), Gaps = 50/410 (12%)
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDE 117
+ + + D+ N +L Y S Q + LFD MP N +S+ + G ++ +
Sbjct: 60 HILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQ 119
Query: 118 AFNY----FAAMPERNAASYNAMISGFIK--FGRLCDAQR--LFKEMPCPNVVSYTVMID 169
A ++ F E N + ++ + LC ++K + T +ID
Sbjct: 120 ALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALID 179
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP------- 222
Y G + AR +FD + ++ VSWT M+ EN YEE+ +LF +M
Sbjct: 180 AY---SVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPN 236
Query: 223 --------------------------------QKNVVASTAMITGFCKQGKVDEAWTLFQ 250
++ A++ + K G++ +A LF+
Sbjct: 237 NFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFE 296
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
++ D+ W++MI YAQ+ R +EAL+LF +M +T + P++ F S+ ACAS LD
Sbjct: 297 EMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDL 356
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
G+Q ++ V+K G +S++ V+NA++ +Y+KCG I +S F + + V+WNTII + Q
Sbjct: 357 GKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQ 416
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
+A + F M+ ++P +T+ S+L ++ + + +L +
Sbjct: 417 LGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTI 466
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 157/323 (48%), Gaps = 6/323 (1%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE-GGGIARARALFDAMPR 192
N +++ +++ L DA +LF EMP N +S+ + GY + + + +F
Sbjct: 74 NILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHE 133
Query: 193 RNEVSWTVMINGLVENGLYEEAWEL----FGRMPQKNVVASTAMITGFCKQGKVDEAWTL 248
N +T ++ LV L W L + + TA+I + +G VD A +
Sbjct: 134 VNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHV 193
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F I C+D+ SW M+ YA+N EE+L LF+QM G +P++ +C L
Sbjct: 194 FDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAF 253
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
+ G+ + +K +D DL V AL+ +Y+K G I+D++ F + + D++ W+ +IA +
Sbjct: 254 NVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARY 313
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
AQ +A F +M V P+ TF S+L C + +D + + ++ +G+
Sbjct: 314 AQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVL-KFGLNSN 372
Query: 429 SEHYACLVDVMSRAGQLQRACEI 451
++DV ++ G+++ + ++
Sbjct: 373 VFVSNAIMDVYAKCGEIENSMKL 395
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 189/399 (47%), Gaps = 40/399 (10%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+D++ + ++++G I A+++F++MP D++ W+ M+ Y S + + LF M
Sbjct: 270 HDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRM 329
Query: 95 PMKNVVSWN----AMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRL 146
+VV N +++ C + LD + + + N NA++ + K G +
Sbjct: 330 RQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEI 389
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN----EVSWTVMI 202
++ +LF+E+P N V++ +I GYV++ +G RA LF M + EV+++ ++
Sbjct: 390 ENSMKLFEELPDRNDVTWNTIIVGYVQLGDG---ERAMNLFTHMLEHDMQPTEVTYSSVL 446
Query: 203 NGLVENGLYEEAWELFG----RMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
E ++ M K+ V + ++I + K G++++A F ++ RD
Sbjct: 447 RASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEV 506
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SWN MI GY+ +G EALNLF M T +P+ L FV + +AC++ LL +G+ + +
Sbjct: 507 SWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESM 566
Query: 319 IKHGFDSDLSVNN--ALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAA-------- 367
K +D + + +V + + G ++ G+ + QP ++ W ++ A
Sbjct: 567 SK-DYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVD 625
Query: 368 ----FAQHVLYYKARS-----YFDQMIAVGVRPDGITFL 397
AQHVL + M A R D + F+
Sbjct: 626 LGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFV 664
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 126/404 (31%), Positives = 218/404 (53%), Gaps = 12/404 (2%)
Query: 59 VFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SWNAMVAGC--VQN 112
VF+++ WN+ + + S F + + F M + V ++ +++ C
Sbjct: 71 VFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVPDSYTYPSVIKACSGTCK 130
Query: 113 DMLDEAFN--YFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDG 170
++ ++ + F +++ ++ + K G + DA+++F E+ NVVS+T M+ G
Sbjct: 131 VLVGKSVHGSVFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVG 190
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST 230
YV G + A+ +FD MP RN SW MI G V+ G A +F MP+KNVV+ T
Sbjct: 191 YVT---AGDVVEAKKVFDEMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFT 247
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
MI G+ K G ++ + LF+Q +D+ +W+ +I+GY QNG EAL +F +M + P
Sbjct: 248 TMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEMESMKVIP 307
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS-VNNALVTMYSKCGSIVDSELA 349
D+ + VSL +A + L L ++ + V D V +ALV M +KCG++ +
Sbjct: 308 DEFVLVSLMSAASQLGDLKLAQRVDSYVDNSSIDLQQDYVISALVDMNAKCGNMERALKL 367
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
F + + D+VS+ ++I F+ H A + F++M+ G+ PD F +L+ C +G +
Sbjct: 368 FREMPKRDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLV 427
Query: 410 DESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
D+ FN M +YGI P +H+AC+VD++ R+GQL+ A E+I+
Sbjct: 428 DKGWKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIK 471
Score = 159 bits (401), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 181/348 (52%), Gaps = 16/348 (4%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ + + + G I AR+VFD++ ++VV+W +M+ Y +G ++ +FD MP
Sbjct: 149 DLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVSWTAMVVGYVTAGDVVEAKKVFDEMP 208
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
++NV SWNAM+ G V+ L A F +MPE+N S+ MI G+ K G + ++ LF++
Sbjct: 209 LRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVSFTTMIDGYAKAGDMESSRFLFEQ 268
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
+VV+++ +I GYV + G A +F M + ++ L+
Sbjct: 269 AAEKDVVAWSALISGYV---QNGEANEALKVFLEMESMKVIPDEFVLVSLMSAASQLGDL 325
Query: 216 ELFGRMP----------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
+L R+ Q++ V S A++ K G ++ A LF+++ RD+ S+ MI
Sbjct: 326 KLAQRVDSYVDNSSIDLQQDYVIS-ALVDMNAKCGNMERALKLFREMPKRDLVSYCSMIH 384
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFD 324
G++ +G GE+A+NLF++M+ G+ PD+ F + TAC+ L+D+G + + ++ +G
Sbjct: 385 GFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSHSGLVDKGWKYFNSMEENYGIS 444
Query: 325 SDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+V + + G + D+ EL +P+ +W +I A H
Sbjct: 445 PTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLH 492
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 198/401 (49%), Gaps = 48/401 (11%)
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQR- 151
KN V W AMV G QN +A +F M E N ++ +++ C ++
Sbjct: 199 KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQV 258
Query: 152 ---LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
+ K NV + ++D Y K G + A+ + + M + VSW ++ G V +
Sbjct: 259 HGFIVKSGFGSNVYVQSALVDMYAKC---GDLKNAKNMLETMEDDDVVSWNSLMVGFVRH 315
Query: 209 GLYEEAWELFGRMPQKNV-------------------------------------VASTA 231
GL EEA LF M +N+ + S A
Sbjct: 316 GLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNA 375
Query: 232 MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
++ + K G +D A+T+F+++ +D+ SW ++TGYAQN EE+L +F M TG+ PD
Sbjct: 376 LVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPD 435
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
I S+ +ACA L LL+ G+Q + IK G SV N+LV MY+KCG + D++ F
Sbjct: 436 QFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFV 495
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
D+++W II +AQ+ + ++D M++ G RPD ITF+ LL C AG +DE
Sbjct: 496 SMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDE 555
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
F M YGI P EHYAC++D+ R+G+L A +++
Sbjct: 556 GRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLL 596
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 200/422 (47%), Gaps = 57/422 (13%)
Query: 33 SSYD-VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
+SY+ +Y+ N + S++G + AR++FDKMP KD +WN+M+++Y + G +R LF
Sbjct: 31 ASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELF 90
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP-ERNAASYNAMIS--------GFIK 142
D K+ ++W+++++G + EAF+ F +M E AS + S G I+
Sbjct: 91 DGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQ 150
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP--RRNEVSWTV 200
G + + K NV T ++D Y K K ++ A LF + R+N V WT
Sbjct: 151 TGEMIHG-FVVKNGFEGNVFVVTGLVDMYAKCK---CVSEAEFLFKGLEFDRKNHVLWTA 206
Query: 201 MINGLVENGLYEEAWELFGRMPQK------------------------------------ 224
M+ G +NG +A E F M +
Sbjct: 207 MVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG 266
Query: 225 ---NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
NV +A++ + K G + A + + + D+ SWN ++ G+ ++G EEAL LF
Sbjct: 267 FGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFK 326
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
M M+ DD F S+ C ++ + + L+IK GF++ V+NALV MY+K G
Sbjct: 327 NMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFENYKLVSNALVDMYAKTG 384
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+ + F + + D++SW +++ +AQ+ + ++ F M GV PD S+LS
Sbjct: 385 DMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILS 444
Query: 402 VC 403
C
Sbjct: 445 AC 446
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 182/370 (49%), Gaps = 24/370 (6%)
Query: 93 AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL 152
A +++ N ++ ++ +++A F MP+++ S+N MIS ++ GRL +A+ L
Sbjct: 30 AASYESIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEAREL 89
Query: 153 FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVEN 208
F C + ++++ +I GY K G A LF +M + ++ + ++
Sbjct: 90 FDGCSCKSSITWSSIISGYCKF---GCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSL 146
Query: 209 GLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRC--RDIASWNI 262
GL + + G + + NV T ++ + K V EA LF+ + ++ W
Sbjct: 147 GLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTA 206
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
M+TGYAQNG G +A+ F M G++ + F ++ TAC+S+ G Q + ++K G
Sbjct: 207 MVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSG 266
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
F S++ V +ALV MY+KCG + +++ D+VSWN+++ F +H L +A F
Sbjct: 267 FGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFK 326
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA----CLVDV 438
M ++ D TF S+L+ CC G I+ VH I E+Y LVD+
Sbjct: 327 NMHGRNMKIDDYTFPSVLN-CCVVGSINPK------SVHGLIIKTGFENYKLVSNALVDM 379
Query: 439 MSRAGQLQRA 448
++ G + A
Sbjct: 380 YAKTGDMDCA 389
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 171/383 (44%), Gaps = 81/383 (21%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+VY + + +++ G++ A+ + + M DVV+WNS++ + G + + LF M
Sbjct: 270 NVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMH 329
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI--SGFIKFGRLCDA 149
+N+ ++ +++ CV + N S + +I +GF + + +A
Sbjct: 330 GRNMKIDDYTFPSVLNCCVVGSI--------------NPKSVHGLIIKTGFENYKLVSNA 375
Query: 150 QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENG 209
++D Y K G + A +F+ M ++ +SWT ++ G +N
Sbjct: 376 -----------------LVDMYAKT---GDMDCAYTVFEKMLEKDVISWTSLVTGYAQNN 415
Query: 210 LYEEAWELFGRM------PQKNVVAS---------------------------------T 230
+EE+ ++F M P + +VAS
Sbjct: 416 SHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYN 475
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
+++ + K G +D+A +F ++ +D+ +W +I GYAQNG+G +L + MV +G +P
Sbjct: 476 SLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRP 535
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSELA 349
D + F+ L AC+ L+D+GR+ + + K +G ++ ++ + G + +++
Sbjct: 536 DFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQL 595
Query: 350 FGQTS-QPDIVSWNTIIAAFAQH 371
Q +PD W ++++A H
Sbjct: 596 LDQMDVKPDATVWKSLLSACRVH 618
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 22/258 (8%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
L+ F +Y + +N + +++ G++ A VF+KM KDV++W S++T Y + +
Sbjct: 360 LIIKTGFENYKLV-SNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHE 418
Query: 86 HSRALFDAMPMKNVVSWNAMVA----GCVQNDMLDEA----FNYFAAMPERNAASYNAMI 137
S +F M + V +VA C + +L+ ++ + + + YN+++
Sbjct: 419 ESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLV 478
Query: 138 SGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRR 193
+ + K G L DA +F M +V+++T +I GY + +G + +DAM R
Sbjct: 479 AMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKG---RNSLKFYDAMVSSGTRP 535
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS-----TAMITGFCKQGKVDEAWTL 248
+ +++ ++ GL +E + F +M + + MI F + GK+DEA L
Sbjct: 536 DFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQL 595
Query: 249 FQQIRCR-DIASWNIMIT 265
Q+ + D W +++
Sbjct: 596 LDQMDVKPDATVWKSLLS 613
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/474 (29%), Positives = 231/474 (48%), Gaps = 64/474 (13%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTA--YWHSGF 83
+ F + FSS + NLN+ + + + F+++ + N + A Y H
Sbjct: 1 MAFRRAFSSSSQFHKNLNLNPKDTTLSHHSEHRRFEEI-IELFCQQNRLKEAVDYLHR-I 58
Query: 84 PQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN----AASYNAMISG 139
PQ S L+ + ++A C+++ L+ A N N +I
Sbjct: 59 PQPSPRLY-----------STLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHM 107
Query: 140 FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWT 199
+ K G L DAQ LF E+P ++ S+ MI GY V G I +AR LFD MP R+ SW
Sbjct: 108 YAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANV---GRIEQARKLFDEMPHRDNFSWN 164
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVVAS------------------------------ 229
+I+G V G Y EA +LF RM Q+N ++
Sbjct: 165 AVISGYVSQGWYMEALDLF-RMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGYLI 223
Query: 230 -----------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
TA++ + K G ++EA +F Q+ +DI SW MI ++GR +E +
Sbjct: 224 RSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFS 283
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
LF ++ +G++P++ F + ACA LA G++ + + + G+D +ALV +YS
Sbjct: 284 LFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYS 343
Query: 339 KCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
KCG+ + F Q +PD+VSW ++I +AQ+ A +F+ ++ G +PD ITF+
Sbjct: 344 KCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVG 403
Query: 399 LLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+LS C AG +D + F+ + +G+ ++HYAC++D+++R+G+ + A II
Sbjct: 404 VLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENII 457
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 200/436 (45%), Gaps = 66/436 (15%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N I +++ G++ A+ +FD++P KD+ +WN+M++ Y + G + +R LFD MP ++
Sbjct: 101 SNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRDN 160
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI----------SGFIKFGRLCDA 149
SWNA+++G V EA + F M E +++ N ++ G+
Sbjct: 161 FSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHG 220
Query: 150 QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENG 209
+ + VV +T ++D Y K G + AR +FD M ++ VSWT MI+ E+G
Sbjct: 221 YLIRSGLELDEVV-WTALLDLYGKC---GSLNEARGIFDQMADKDIVSWTTMIHRCFEDG 276
Query: 210 LYEEAWELF------GRMPQKNV---------------------------------VAST 230
+E + LF G P + A++
Sbjct: 277 RKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAAS 336
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
A++ + K G + A +F Q+ D+ SW +I GYAQNG+ + AL F ++R+G +P
Sbjct: 337 ALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKP 396
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVI-KHGFDSDLSVNNALVTMYSKCGSIVDSE-L 348
D++ FV + +AC L+D G + + V KHG ++ + ++ G ++E +
Sbjct: 397 DEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENI 456
Query: 349 AFGQTSQPDIVSWNTIIAAFAQH----VLYYKARSYFDQMIAVGVRPDG-ITFLSLLSVC 403
+PD W +++ H + A++ F+ + P+ T+++L ++
Sbjct: 457 IDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFE------LEPENPATYITLSNIY 510
Query: 404 CRAGKIDESMNLFNLM 419
AG E + N M
Sbjct: 511 ANAGLWTEETKVRNDM 526
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 95/199 (47%), Gaps = 20/199 (10%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNV 99
+ +S+ GN AR+VF++MP D+V+W S++ Y +G P + F+++ +
Sbjct: 339 VHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDE 398
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERN-----AASYNAMISGFIKFGRLCDAQRLFK 154
+++ +++ C ++D YF ++ E++ A Y +I + GR +A+ +
Sbjct: 399 ITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIID 458
Query: 155 EMPC-PNVVSYTVM-----IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
MP P+ + + I G +++ E A+ALF+ P N ++ + N
Sbjct: 459 NMPMKPDKFLWASLLGGCRIHGNIELAERA----AKALFELEP-ENPATYITLSNIYANA 513
Query: 209 GLYEEAWELFGRMPQKNVV 227
GL+ E ++ M + +V
Sbjct: 514 GLWTEETKVRNDMDNRGIV 532
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 217/442 (49%), Gaps = 68/442 (15%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEA------FNYFAAM 125
N +L+ Y + ++ LF+ +P++NVVSWN M+ V + +E+ F+YF M
Sbjct: 99 NQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRM 158
Query: 126 ------PERNAASYNAMISGFIKFGRL-------CDAQRLFKEMPCPNVVSYTVMIDGYV 172
P+ ++N +I +F + C ++ ++ C ++ Y
Sbjct: 159 LLEMMVPDH--ITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDC---FVGCALVGLYA 213
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP---------- 222
K G + AR +F + R+ V W VM++ V N L EEA+ +F M
Sbjct: 214 KC---GFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFT 270
Query: 223 -------------------------------QKNVVASTAMITGFCKQGKVDEAWTLFQQ 251
+V+ ++A+I + K + +A +F +
Sbjct: 271 FSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDE 330
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+ R++ +WN MI G+ +G G E + L +M+R G PD+L S+ ++C + + +
Sbjct: 331 MSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITET 390
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
Q +A +K LSV N+L++ YSKCGSI + F TSQPD+V+W ++I A+A H
Sbjct: 391 LQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFH 450
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
L K+ F++M++ G++PD I FL +LS C G + + ++ F LM + Y I P SEH
Sbjct: 451 GLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEH 510
Query: 432 YACLVDVMSRAGQLQRACEIIR 453
Y CLVD++ R G + A EI+R
Sbjct: 511 YTCLVDLLGRYGLINEAFEILR 532
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 162/339 (47%), Gaps = 24/339 (7%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV---KVKEGGGIARARALFDAM 190
N ++S ++K DA++LF+E+P NVVS+ +MI V E G+ + F M
Sbjct: 99 NQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRM 158
Query: 191 PRRNEVSWTVMINGLV---------ENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
V + NGL+ E G+ + + V A++ + K G
Sbjct: 159 LLEMMVPDHITFNGLICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVG-CALVGLYAKCGF 217
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
V+ A +F + CRD+ WN+M++ Y N EEA +F+ M + D+ F SL +
Sbjct: 218 VENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSV 277
Query: 302 CASLAL--LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
+ AL D G+Q ++LV++ FDSD+ V +AL+ MY+K +I+D+ F + S ++V
Sbjct: 278 ISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRVFDEMSIRNVV 337
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+WNT+I F H + +M+ G PD +T S++S C A I E+ L
Sbjct: 338 AWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTISSIISSCGYASAITET-----LQ 392
Query: 420 VHDYGIPPRSEHYA----CLVDVMSRAGQLQRACEIIRL 454
VH + + + + L+ S+ G + A + L
Sbjct: 393 VHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFEL 431
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 146/294 (49%), Gaps = 23/294 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ +++ G + AR+VF + +D+V WN M++ Y + P+ + +F++M + +VV+ +
Sbjct: 209 VGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPEEAFRVFNSMRL-DVVNGD 267
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPERNA----ASYN-------AMISGFIKFGRLCDAQRL 152
+ + + D+A Y+ + ++ S++ A+I+ + K + DA+R+
Sbjct: 268 EFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVLVASALINMYAKSENIIDARRV 327
Query: 153 FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
F EM NVV++ MI G+ +G + + L M R + + I+ ++ + Y
Sbjct: 328 FDEMSIRNVVAWNTMIVGFGNHGDGNEVMK---LVKEMLREGFLPDELTISSIISSCGYA 384
Query: 213 EAWELFGRMP--------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
A ++ Q + + ++I+ + K G + A+ F+ D+ +W +I
Sbjct: 385 SAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLI 444
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
YA +G E++ +F +M+ G++PD + F+ + +ACA L+ +G + L+
Sbjct: 445 YAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLHYFKLM 498
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 96/214 (44%), Gaps = 17/214 (7%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYR-ANLNIAAFSRAGNITAARQVF 60
+SSII S + T + + FA S D AN I+A+S+ G+IT+A + F
Sbjct: 374 ISSIISSCGYASAITETLQ----VHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCF 429
Query: 61 DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLD 116
+ D+VTW S++ AY G + S +F+ M + +++ +++ C ++
Sbjct: 430 ELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVT 489
Query: 117 EAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGY 171
+ +YF M ++ Y ++ ++G + +A + + MP G
Sbjct: 490 KGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGS 549
Query: 172 VKVKEGGGIAR--ARALFDAMPRRNEVSWTVMIN 203
K+ +A+ A LF P ++ V++ VM N
Sbjct: 550 CKLHSNMELAKLAAEKLFLIEPEKS-VNYAVMSN 582
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 111/244 (45%), Gaps = 21/244 (8%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
LV + F S DV A+ I ++++ NI AR+VFD+M ++VV WN+M+ + + G
Sbjct: 295 LVLRQSFDS-DVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGN 353
Query: 86 HSRALFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY----NAMI 137
L M + + ++ +++++ C + E A + + + N++I
Sbjct: 354 EVMKLVKEMLREGFLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLI 413
Query: 138 SGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRR 193
S + K G + A + F+ P++V++T +I Y G ++ +F+ M +
Sbjct: 414 SAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAF---HGLAEKSTEMFEKMLSYGIKP 470
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS-----TAMITGFCKQGKVDEAWTL 248
+ +++ +++ GL + F M + T ++ + G ++EA+ +
Sbjct: 471 DRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEI 530
Query: 249 FQQI 252
+ +
Sbjct: 531 LRSM 534
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
A L +G+Q +A +IK GF LS+ N ++++Y KC D++ F + ++VSWN
Sbjct: 71 AKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWN 130
Query: 363 TIIAAFAQHVLYYKAR------SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
+I A ++ SYF +M+ + PD ITF L+ +C + I+ + L
Sbjct: 131 IMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMGVQL 189
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/446 (30%), Positives = 219/446 (49%), Gaps = 58/446 (13%)
Query: 57 RQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLD 116
R F+ PT N+++T Y G +R +FD MP + V+WN ++AG VQN D
Sbjct: 306 RSGFESDPT----VANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTD 361
Query: 117 EAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV 172
EA F AM + ++ ++ + + +K G L + KE+ +V + V D Y+
Sbjct: 362 EAVALFKAMVTSGVKLDSITFASFLPSVLKSGSL----KYCKEVH-SYIVRHGVPFDVYL 416
Query: 173 KVK------EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
K +GG + A F + T MI+G V NGL EA LF + Q+ +
Sbjct: 417 KSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGM 476
Query: 227 VAS---------------------------------------TAMITGFCKQGKVDEAWT 247
V + +++ + K G++D A+
Sbjct: 477 VPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQ 536
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
F+++ +D WN+MI ++QNG+ E A++LF QM +G + D + + +ACA+
Sbjct: 537 FFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPA 596
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
L G++ + V+++ F SD V + L+ MYSKCG + + F + VSWN+IIAA
Sbjct: 597 LYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAA 656
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
+ H + F +M+ G++PD +TFL ++S C AG +DE + F M +YGI
Sbjct: 657 YGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICA 716
Query: 428 RSEHYACLVDVMSRAGQLQRACEIIR 453
R EH+AC+VD+ RAG+L A + I+
Sbjct: 717 RMEHFACMVDLYGRAGRLHEAFDTIK 742
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 207/431 (48%), Gaps = 24/431 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ + I ++ G I A+ +FD++P +D + WN ML Y +G + F M
Sbjct: 211 DLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMR 270
Query: 96 ----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLC 147
N VS+ +++ C ++ + E + N +I+ + K G L
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLF 330
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMIN 203
DA+++F MP + V++ +I GYV + G A ALF AM + + +++ +
Sbjct: 331 DARKIFDIMPQTDTVTWNGLIAGYV---QNGFTDEAVALFKAMVTSGVKLDSITFASFLP 387
Query: 204 GLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
++++G + E+ + + +V +A++ + K G V+ A FQQ D+A
Sbjct: 388 SVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAV 447
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
MI+GY NG EALNLF +++ GM P+ L S+ ACA+LA L G++ + ++
Sbjct: 448 CTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDIL 507
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
K G ++ V +++ MY+K G + + F + D V WN +I +F+Q+ A
Sbjct: 508 KKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAID 567
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY--ACLVD 437
F QM G + D ++ + LS C + L +V + I S+ + + L+D
Sbjct: 568 LFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFI---SDTFVASTLID 624
Query: 438 VMSRAGQLQRA 448
+ S+ G+L A
Sbjct: 625 MYSKCGKLALA 635
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 128/229 (55%), Gaps = 1/229 (0%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
++ +++I + G + +A LF ++ RD WN+M+ GY +NG AL F +M
Sbjct: 211 DLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMR 270
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
+ ++P+ + FV L + CA+ ++ G Q + LVI+ GF+SD +V N ++TMYSKCG++
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLF 330
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
D+ F Q D V+WN +IA + Q+ +A + F M+ GV+ D ITF S L
Sbjct: 331 DARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVL 390
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
++G + + + +V +G+P + LVD+ + G ++ AC+ +
Sbjct: 391 KSGSLKYCKEVHSYIVR-HGVPFDVYLKSALVDIYFKGGDVEMACKTFQ 438
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 166/414 (40%), Gaps = 80/414 (19%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFD 61
L S++ S +LK + H +V +H +DVY + + + + G++ A + F
Sbjct: 386 LPSVLKSGSLK-----YCKEVHSYIV--RHGVPFDVYLKSALVDIYFKGGDVEMACKTFQ 438
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
+ DV +M++ Y +G + LF + +Q M+
Sbjct: 439 QNTLVDVAVCTAMISGYVLNGLNVEALNLFRWL---------------IQEGMVPNCLTM 483
Query: 122 FAAMPERNAASYNAMISGFIKFGR--LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGG 179
+ +P A + +K G+ CD + E C S T M Y K G
Sbjct: 484 ASVLPACAALAS-------LKLGKELHCDILKKGLENVCQVGSSITYM---YAK---SGR 530
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV------------- 226
+ A F MP ++ V W +MI +NG E A +LF +M
Sbjct: 531 LDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSA 590
Query: 227 ---------------------------VASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
VAST +I + K GK+ A ++F + ++ S
Sbjct: 591 CANYPALYYGKELHCFVVRNSFISDTFVAST-LIDMYSKCGKLALARSVFDMMDWKNEVS 649
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALV 318
WN +I Y +GR E L+LF +MV G+QPD + F+ + +AC L+D+G + +
Sbjct: 650 WNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMT 709
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
++G + + +V +Y + G + ++ + PD +W +++ A H
Sbjct: 710 EEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLH 763
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%), Gaps = 1/192 (0%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN +I G++ G + AL F +M+ + + PD F + AC L + + + L
Sbjct: 145 WNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELAR 204
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
GF DL + ++L+ +Y+ G I D++ F + D + WN ++ + ++ + A
Sbjct: 205 SMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALG 264
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
F +M V+P+ ++F+ LLSVC G + + L L++ G ++ +
Sbjct: 265 TFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRS-GFESDPTVANTIITMY 323
Query: 440 SRAGQLQRACEI 451
S+ G L A +I
Sbjct: 324 SKCGNLFDARKI 335
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 146/541 (26%), Positives = 237/541 (43%), Gaps = 127/541 (23%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG------------- 82
D + + I +S+ G I A +VFD++ KD+ + SM+TAY HSG
Sbjct: 66 DCFVGSSLIRLYSQYGKIKDAHKVFDEITNKDIFAYTSMITAYGHSGGSCVYGAFNTAFI 125
Query: 83 ------FPQ--------HSRALFDAMPMKNVVSWNA------MVAGCVQNDMLDE----- 117
P H+ A A+ V A + + +LD
Sbjct: 126 MQQQGMLPNRVTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDVFETTLLDMYHKCG 185
Query: 118 ----AFNYFAAMPER---NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNV--------- 161
A + FA M R S+NA+I+G+++ G+ +A LF+ M C NV
Sbjct: 186 GVGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLPDLLTLAN 245
Query: 162 ------------------------------VSYTVMIDGYVKVKEGGGIARARALFDAMP 191
V+ T ++D Y K+ I +AR LF+ +
Sbjct: 246 AIFCCVELNYLRRGMSIHGYMITMGVELDLVASTALVDLYCKID----ITKARKLFERLG 301
Query: 192 RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAM------------------- 232
++ V + VM+ G +ENGL EA +F M + N + A+
Sbjct: 302 NKDAVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRS 361
Query: 233 --------------------ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGR 272
I + K G V +A +F ++R RD+ SW MI GY +G
Sbjct: 362 IHGYVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGH 421
Query: 273 GEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
++A+ LF + R + D + + L A + L L ++ + + DLSVNN+
Sbjct: 422 IDKAIILFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKDLSVNNS 481
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
L+T Y+KCG + + F Q ++ + SWN +I A+A H Y + FD M A V PD
Sbjct: 482 LITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMHGNYTEVLELFDHMKAGKVTPD 541
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+TF S+L+ C +G ++E + +F +M+ +Y I P HY+C+VD++SRAG+L+ A ++
Sbjct: 542 EVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSCIVDLLSRAGRLREAYNLV 601
Query: 453 R 453
+
Sbjct: 602 K 602
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 118/243 (48%), Gaps = 26/243 (10%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
+H V AN I A+++ G + AR+VF++M T+D+V+W SM+ Y + G +
Sbjct: 368 RHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHIDKAII 427
Query: 90 LFDAMPMKNVVSWNAMVAGCVQN-------DMLDE----AFNYFAAMPERNAASYNAMIS 138
LF + +++ + + G +Q + E ++ +F ++ + N++I+
Sbjct: 428 LFRLLQREHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHG---KDLSVNNSLIT 484
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRN 194
+ K G+LC A+ +F++M + S+ MI Y G LFD M +
Sbjct: 485 TYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAM---HGNYTEVLELFDHMKAGKVTPD 541
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQK-----NVVASTAMITGFCKQGKVDEAWTLF 249
EV++T ++ +GL EE ++FG M ++ N V + ++ + G++ EA+ L
Sbjct: 542 EVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSCIVDLLSRAGRLREAYNLV 601
Query: 250 QQI 252
+ +
Sbjct: 602 KSM 604
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
+ F D+ N I +++ G + AR +F +M + + +WN+M+ AY G
Sbjct: 469 RFFHGKDLSVNNSLITTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMHGNYTEVLE 528
Query: 90 LFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGF 140
LFD M V V++ +++ C + +++E F M + N Y+ ++
Sbjct: 529 LFDHMKAGKVTPDEVTFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSCIVDLL 588
Query: 141 IKFGRLCDAQRLFKEMP 157
+ GRL +A L K MP
Sbjct: 589 SRAGRLREAYNLVKSMP 605
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 186/333 (55%), Gaps = 6/333 (1%)
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
F MP++N S+N+++SG+IK G L + QR F E+P +V+S+ M+ GY K G +
Sbjct: 162 FDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAK---AGKMD 218
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
RA LF MP RN SW MI G V+ G EA ELF MP++N V+ MI G+ K G
Sbjct: 219 RACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGD 278
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR--TGMQPDDLIFVSLF 299
V A LF Q+ +D+ S+N MI YAQ+ + +EAL+LF+ M++ + + PD + S+
Sbjct: 279 VHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVI 338
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
+AC+ L L+ R + + G D + AL+ +Y+KCGSI + F + D+V
Sbjct: 339 SACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYELFHGLRKRDVV 398
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+++ +I + A F++M + P+ +T+ +L+ AG +E F +
Sbjct: 399 AYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCF-IS 457
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+ D GI P +HY +VD++ RAG L A ++I
Sbjct: 458 MKDNGIVPSVDHYGIMVDLLGRAGWLDEAYKLI 490
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 185/377 (49%), Gaps = 45/377 (11%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
VY + + + G++ AR+VFD+MP K+VV+WNS+L+ Y G + FD +P+
Sbjct: 139 VYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPL 198
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM 156
K+V+SWN MV+G + +D A F MPERN AS+N MI+G++ G + +A+ LF M
Sbjct: 199 KDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAM 258
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
P N VS MI GY K G + AR LFD M ++ +S+ MI ++ +EA +
Sbjct: 259 PRRNSVSLITMIAGYSK---SGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALD 315
Query: 217 LFGRM--------PQKNVVAS---------------------------------TAMITG 235
LF M P K +AS TA+I
Sbjct: 316 LFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDL 375
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+ K G +D+A+ LF +R RD+ +++ MI G NGR +A+ LF +M + P+ + +
Sbjct: 376 YAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTY 435
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTS 354
+ TA L ++G + + + +G + +V + + G + ++ +L
Sbjct: 436 TGILTAYNHAGLAEEGYRCFISMKDNGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPM 495
Query: 355 QPDIVSWNTIIAAFAQH 371
QP++ W ++ A H
Sbjct: 496 QPNVGVWGALLLACRLH 512
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 144/316 (45%), Gaps = 55/316 (17%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV N ++ +++AG + A +F +MP ++ +WN+M+T Y G +R LFDAMP
Sbjct: 200 DVISWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTMITGYVDCGSIVEARELFDAMP 259
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
+N VS M+AG ++ + A F M +++ SYNAMI+ + + + +A LF
Sbjct: 260 RRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNV 319
Query: 156 MPCPN------------VVS-----------------------------YTVMIDGYVKV 174
M P+ V+S T +ID Y K
Sbjct: 320 MLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKC 379
Query: 175 KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVAST 230
G I +A LF + +R+ V+++ MI G NG +A ELF RM + N+V T
Sbjct: 380 ---GSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYT 436
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRT 286
++T + G +E + F ++ I + IM+ + G +EA L +M
Sbjct: 437 GILTAYNHAGLAEEGYRCFISMKDNGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKM--- 493
Query: 287 GMQPDDLIFVSLFTAC 302
MQP+ ++ +L AC
Sbjct: 494 PMQPNVGVWGALLLAC 509
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 4/173 (2%)
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
++ +R D SW +I ++Q G+ EA++L+ QM R G+ P S+ +CA +
Sbjct: 59 SILHHLRNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVE 118
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
G + V K GFD+ + V AL+ +Y K G +V + F + ++VSWN++++
Sbjct: 119 DDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLS 178
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+ + + + +FD++ D I++ ++S +AGK+D + LF M
Sbjct: 179 GYIKGGNLDEGQRFFDEI----PLKDVISWNCMVSGYAKAGKMDRACYLFQQM 227
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 110/223 (49%), Gaps = 13/223 (5%)
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
V TA++ +CK G V A +F ++ +++ SWN +++GY + G +E F ++
Sbjct: 139 VYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPL 198
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
D + + + + A +D+ + + + F S N ++T Y CGSIV+
Sbjct: 199 ----KDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFAS----WNTMITGYVDCGSIVE 250
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
+ F + + VS T+IA +++ + AR FDQM D +++ ++++ +
Sbjct: 251 ARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQM----DDKDLLSYNAMIACYAQ 306
Query: 406 AGKIDESMNLFNLMVH-DYGIPPRSEHYACLVDVMSRAGQLQR 447
+ K E+++LFN+M+ D + P A ++ S+ G L+
Sbjct: 307 SSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEH 349
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 142/435 (32%), Positives = 218/435 (50%), Gaps = 53/435 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM- 125
DV N + Y+ Q R LFD M KNVVSW ++AGC+QN +A + F M
Sbjct: 276 DVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMA 335
Query: 126 -----PE--------------------RNAASY-------------NAMISGFIKFGRLC 147
P+ R +Y N +I + K L
Sbjct: 336 RMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLT 395
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL-- 205
DA+++F M ++VSY MI+GY + + + A LF M R + S T++I
Sbjct: 396 DARKVFNLMAAIDLVSYNAMIEGYSRQDK---LCEALDLFREM-RLSLSSPTLLIFVSLL 451
Query: 206 -VENGLY--EEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
V LY E + ++ G + + V A +A+I + K +V +A +F++I+ +DI
Sbjct: 452 GVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIV 511
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
W M +GY Q EE+L L+ + + ++P++ F ++ TA +++A L G+Q + V
Sbjct: 512 VWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQV 571
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
IK GFD D V N LV MY+K GSI ++ AF T+ D WN++IA +AQH KA
Sbjct: 572 IKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKAL 631
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F+ MI G++P+ +TF+ +LS C G +D + F+ M +GI P EHY C+V +
Sbjct: 632 QVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQ-FGIEPGIEHYVCMVSL 690
Query: 439 MSRAGQLQRACEIIR 453
+ RAG+L A E I
Sbjct: 691 LGRAGKLYEAKEFIE 705
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 204/436 (46%), Gaps = 25/436 (5%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
F +D++ N + A+S+ + A ++FD M K++VTW+SM++ Y H + LF
Sbjct: 69 FHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLF 128
Query: 92 -------DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGF 140
+ P + +++ ++V C Q L+ A + + ++ ++I +
Sbjct: 129 VQFMRSCNEKPNEYILA--SVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFY 186
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
K + DA+ LF + ++T +I GY K G + LFD M +
Sbjct: 187 TKHACIDDARLLFDGLQVKTSFTWTTIIAGYSK---QGRSQVSLKLFDQMKEGHVCPDKY 243
Query: 201 MINGLVENGL----YEEAWELFGRMPQKNVVASTAMITGFC----KQGKVDEAWTLFQQI 252
+++ ++ L E ++ + + +V +M+ GF K KV LF ++
Sbjct: 244 VLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRM 303
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
+++ SW +I G QN +AL+LF +M R G PD S+ +C SL L++GR
Sbjct: 304 VDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGR 363
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
Q +A IK D+D V N L+ MY+KC S+ D+ F + D+VS+N +I +++
Sbjct: 364 QVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQD 423
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY 432
+A F +M P + F+SLL V ++ S + L++ YG+
Sbjct: 424 KLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLII-KYGVSLDEFAG 482
Query: 433 ACLVDVMSRAGQLQRA 448
+ L+DV S+ ++ A
Sbjct: 483 SALIDVYSKCSRVGDA 498
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 237/463 (51%), Gaps = 36/463 (7%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H + K S D + ++ + +++ G + A+QVFD M ++ V W +++ Y
Sbjct: 101 HCHIV----KTGSHEDPFLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQ 156
Query: 81 SGFPQHSRALFDAMPMKN---------VVSWNAMVAGCVQNDMLDEAFNYF--AAMPERN 129
+ P+H+ LF+ M + + ++ NA + + + L E + + + +
Sbjct: 157 NSMPKHAIHLFEEMLLHSECYPSNYTLAIALNACTS--LHSLKLGEQLHAYIIKYHVDFD 214
Query: 130 AASYNAMISGFIKF-GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR--ARAL 186
+ NA+ S + K G+L F+ + +V+S+T I + E R L
Sbjct: 215 TSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEML 274
Query: 187 FDAMP-RRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGK 241
D + + NE + T ++ E E ++ + N+ +++ + K G
Sbjct: 275 LDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGC 334
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQ-----------NGRGEEALNLFSQMVRTGMQP 290
+ EA LF+ + ++ +WN MI G+AQ +G EALNLFS++ R+GM+P
Sbjct: 335 IVEAQRLFKGMNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKGIEALNLFSKLNRSGMKP 394
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
D F S+ + C+ + L+QG Q +A IK GF SD+ V ++++ MY+KCGSI + F
Sbjct: 395 DPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSMINMYNKCGSIERASKVF 454
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
+ S ++ W T+I FAQH +A + F+ M VG+RP+ +TF+ +LS C AG ++
Sbjct: 455 LEMSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGIRPNLVTFVGVLSACGSAGMVN 514
Query: 411 ESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
E+ N F +M +Y I P +HY CLVD++ R GQ+Q A ++I+
Sbjct: 515 EAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAFDLIK 557
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 225/452 (49%), Gaps = 26/452 (5%)
Query: 23 HFLLVFAKHFSSYDVYRANLNIAA-----FSRAGNITAARQVFDKMPTKDVVTWNSMLTA 77
H +L+ A S D Y +N+ + + + + + AR+VFD MP +D V WN+M+
Sbjct: 126 HLMLLHAH--SIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMING 183
Query: 78 YWHSGFPQHSRALFDAMPMKNVVSWNAMV------AGCVQNDMLDEAFNYFAAMPERNAA 131
+ S LF M V ++ V A +Q + A
Sbjct: 184 LVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFC 243
Query: 132 SY--NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDA 189
Y +IS + K G + A+ LF+ + P++++Y MI G+ GG + LF
Sbjct: 244 DYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTA---NGGTECSVKLFRE 300
Query: 190 MPRRNEVSWTVMINGLV----ENGLYEEAWELFGRMPQKNVV----ASTAMITGFCKQGK 241
+ E + I GL+ G A + G + ++ STA + K +
Sbjct: 301 LLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNE 360
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
+D A LF + + + +WN MI+GY QNG E A++LF +M++T P+ + ++ +A
Sbjct: 361 IDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSA 420
Query: 302 CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
CA L L G+ + L+ + ++ V+ ALV MY+KCG+I ++ F S+ + V+W
Sbjct: 421 CAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTW 480
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
NT+I + H ++A +++M+ +G P +TFLS+L C AG + E +F+ MV+
Sbjct: 481 NTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVN 540
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
Y I P EHYAC+VD++ R+GQL++A E I+
Sbjct: 541 KYRIEPLIEHYACMVDILGRSGQLEKALEFIK 572
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 181/431 (41%), Gaps = 51/431 (11%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D+ T + + +H+RALF ++P ++ +N +V G ND + + + +
Sbjct: 43 DLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLR 102
Query: 127 ERNAASYNAMISGFI-------KFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGG 179
S + F K L A + NV + ++D Y K
Sbjct: 103 RNTNLSPDNFTYAFAVAACSNDKHLMLLHAHSIIDGYG-SNVFVGSALVDLYCKFSR--- 158
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMIT----- 234
+ AR +FD MP R+ V W MINGLV+N ++++ +LF M V ++ +T
Sbjct: 159 VVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPA 218
Query: 235 ----------------------GFC------------KQGKVDEAWTLFQQIRCRDIASW 260
GFC K G V+ A LF++I D+ ++
Sbjct: 219 AAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAY 278
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
N MI+G+ NG E ++ LF +++ +G + V L + L + +K
Sbjct: 279 NAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVK 338
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
G + +V+ A +Y+K I + F ++ + +V+WN +I+ + Q+ A S
Sbjct: 339 SGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISL 398
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
F +M+ P+ +T ++LS C + G + + +L + + P LVD+ +
Sbjct: 399 FKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHL-IKSENLEPNIYVSTALVDMYA 457
Query: 441 RAGQLQRACEI 451
+ G + A ++
Sbjct: 458 KCGNISEAWQL 468
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 242/529 (45%), Gaps = 112/529 (21%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DVY ++A SR +I A VFDKMP V WN+++T +G + L M
Sbjct: 120 DVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMF 179
Query: 96 MKNV----VSWNAMVAGCVQNDMLD----------------------------------- 116
NV ++ M++ C ++ LD
Sbjct: 180 RMNVRGDNYTFATMLSLCPLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMYFNCGCVV 239
Query: 117 EAFNYFAAMPE--RNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMID- 169
+ + F M RN +YNAMI GF+ R DA +F++M C + V++ ++
Sbjct: 240 DGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFEDAFLMFRDMHRGSVCLSEVTFVSVLSS 299
Query: 170 ---------------------GYVKVKEG--------GGIARARALFDAMPR-RNEVSWT 199
GY V G + AR++F+ M R+ VSW
Sbjct: 300 CCSLRVGCQAQGLAIKMGFDCGYTAVNNATMTMYSFFGKVNEARSVFEIMEESRDLVSWN 359
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVVAS------------------------------ 229
VM++ + + E+A + +M ++ +
Sbjct: 360 VMVSMFFQENINEDAILTYIKMRREGIEPDAFTYGSLLSASDSLQMVEMIHSVLCKNGLN 419
Query: 230 -----TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
A+I+ + + G++ A+ +F + + + SWN +I+G+ NG + L FS ++
Sbjct: 420 KVEVLNALISSYSRNGQIKRAFQIFSDLAYKSLISWNSIISGFVLNGYPMQGLEKFSALL 479
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
T ++P+ + C+ +D G+Q + +++HGFDS++S+ NALVTMYSKCG +
Sbjct: 480 NTHLKPNAYSLSLALSICSCTPDMDHGKQVHGYILRHGFDSEISLGNALVTMYSKCGFLD 539
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM-IAVGVRPDGITFLSLLSVC 403
S F + + D ++WN II+A++QH +A F+ M I+ G++PD TF ++LS C
Sbjct: 540 RSLSVFNEMVERDTITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVLSAC 599
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+G +D++ +F++MV+ YG P +H++C+VD++ R+G L A ++
Sbjct: 600 SHSGLVDDATRIFDIMVNIYGFVPSVDHFSCIVDLLGRSGYLDEAERVV 648
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 226/498 (45%), Gaps = 65/498 (13%)
Query: 10 ALKPTPSSTARHTHFLLVFAKHFSSYDV--------YRANLNIAAFSRAGNITAARQVFD 61
L T ++T++ H + VF S+ + + AN ++ +++A ++ + VFD
Sbjct: 56 TLSTTITATSKTRH-VTVFGNQLHSFAIKTALKAYSHVANSLLSLYAKAHDLVSVELVFD 114
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAF-- 119
+ DV +W ++L+A ++ +FD MP V WNA++ GC N D AF
Sbjct: 115 DIQCPDVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRL 174
Query: 120 ------------NY-FAAM----PERNAASY--------------------NAMISGFIK 142
NY FA M P Y N++I+ +
Sbjct: 175 LKDMFRMNVRGDNYTFATMLSLCPLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMYFN 234
Query: 143 FGRLCDAQRLFKEMP--CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNEV 196
G + D ++F+EM N V+Y MIDG+V V+ A +F M R +EV
Sbjct: 235 CGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVER---FEDAFLMFRDMHRGSVCLSEV 291
Query: 197 SWTVMINGLVENGLYEEAWELFGRM--PQKNVVASTAMITGFCKQGKVDEAWTLFQQI-R 253
++ +++ + +A L +M + A +T + GKV+EA ++F+ +
Sbjct: 292 TFVSVLSSCCSLRVGCQAQGLAIKMGFDCGYTAVNNATMTMYSFFGKVNEARSVFEIMEE 351
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
RD+ SWN+M++ + Q E+A+ + +M R G++PD + SL +A SL +++
Sbjct: 352 SRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAFTYGSLLSASDSLQMVE---M 408
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
++++ K+G + + V NAL++ YS+ G I + F + ++SWN+II+ F +
Sbjct: 409 IHSVLCKNGLNK-VEVLNALISSYSRNGQIKRAFQIFSDLAYKSLISWNSIISGFVLNGY 467
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
+ F ++ ++P+ + LS+C +D + ++ +G
Sbjct: 468 PMQGLEKFSALLNTHLKPNAYSLSLALSICSCTPDMDHGKQVHGYILR-HGFDSEISLGN 526
Query: 434 CLVDVMSRAGQLQRACEI 451
LV + S+ G L R+ +
Sbjct: 527 ALVTMYSKCGFLDRSLSV 544
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 33/198 (16%)
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ-GRQ 313
+ I N +T + + E+L LF++ + + +PD + TA + + G Q
Sbjct: 18 QQILKLNHKLTHLTKTNQFYESLKLFTK-IHSSHKPDHCTLSTTITATSKTRHVTVFGNQ 76
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA------ 367
++ IK + V N+L+++Y+K +V EL F PD+ SW T+++A
Sbjct: 77 LHSFAIKTALKAYSHVANSLLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAISRLSD 136
Query: 368 --FAQHVLYYKARSY-----------------------FDQMIAVGVRPDGITFLSLLSV 402
+A HV + Y M + VR D TF ++LS+
Sbjct: 137 IDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAFRLLKDMFRMNVRGDNYTFATMLSL 196
Query: 403 CCRAGKIDESMNLFNLMV 420
C + +D ++ +++V
Sbjct: 197 CPLSEGLDYGRHVHSVVV 214
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 221/419 (52%), Gaps = 13/419 (3%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN--- 103
+ + ++T+A Q+FD+MP ++VV+W+S++T H+G + +LF M + V N
Sbjct: 2 YIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFT 61
Query: 104 --AMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMP 157
+ + C ++ + +A+ ++ + E N NA ++ ++ G+L +A ++F+ P
Sbjct: 62 FVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSP 121
Query: 158 CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL 217
+ V++ M+ GY++ R + + +E ++ + GL + ++
Sbjct: 122 IRDTVTWNTMMGGYLEFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQV 181
Query: 218 FGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
++ + ++ +++ + K K++E + F +I +D+ SW M G Q G
Sbjct: 182 HAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEP 241
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
AL + ++M + G++P+ + ACA LA +++G+Q + L IK G D D+ V+NAL
Sbjct: 242 RMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNAL 301
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
+ MY+KCG + + F T+ +VSW T+I A AQ+ +A FD+M V P+
Sbjct: 302 LDMYAKCGCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNY 361
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
ITF+ +L C + G +DE + M DYGI P +HY C+V ++ RAG ++ A E+I
Sbjct: 362 ITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELI 420
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 188/335 (56%), Gaps = 19/335 (5%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
N +++ + KFG L +A +LF MP N +S +MI Y+ E G I A+ LFD M R
Sbjct: 117 NHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYL---EMGNIENAKNLFDEMTER 173
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRM------PQKNVVASTAMITGFCKQGKVDEAWT 247
N +W M+ GLV+ GL EEA LF RM P + S + V + +T
Sbjct: 174 NVATWNAMVTGLVKFGLNEEAL-LFSRMNVLGFVPDEYSFGSVLRGCAHLRALSVGDRFT 232
Query: 248 L-FQQIRCR--------DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
L + + R ++ +WN ++ G AQN + L+ + M G +PD + FVS+
Sbjct: 233 LMLRNVGERIIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSV 292
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDI 358
++C+ LA L QG+Q +A VIK G S ++V ++LV+MYSKCGS+ DS AF + + D+
Sbjct: 293 ISSCSELATLCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDV 352
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
V W+++IAA+ H KA F+ + + +TFLSLL C +G D+ ++ F++
Sbjct: 353 VLWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDM 412
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
MV YG+ R EHY C+VD++ R+G L+ A IIR
Sbjct: 413 MVEKYGLKARLEHYTCVVDLLGRSGCLEEAETIIR 447
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 196/408 (48%), Gaps = 25/408 (6%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFD 61
L SI++ + S + H L +F +SS D + +N + +S+ G + A ++FD
Sbjct: 80 LFSILIQSCIPTNSVSLGKQLHSL-IFTSGYSS-DKFISNHLLNFYSKFGELNNAVKLFD 137
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAF-- 119
+MP ++ ++ N M+ AY G ++++ LFD M +NV +WNAMV G V+ + +EA
Sbjct: 138 RMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLF 197
Query: 120 ---NYFAAMPE--------RNAASYNAMISGFIKFGRLCD--AQRLFKEMPCPNVVSYTV 166
N +P+ R A A+ G +F + +R+ K MP N+V++
Sbjct: 198 SRMNVLGFVPDEYSFGSVLRGCAHLRALSVG-DRFTLMLRNVGERIIKWMPNCNLVAWNT 256
Query: 167 MIDGYVKVKEGGGIARARALFD-AMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKN 225
++ G + + G+ + A R + +++ +I+ E + ++ + +
Sbjct: 257 LMAGKAQNRCFDGVLDHYCMMKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEVIKAG 316
Query: 226 ----VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
V +++++ + K G + ++ F + RD+ W+ MI Y +G+ E+A+ LF+
Sbjct: 317 ASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFHGQCEKAIKLFN 376
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI-KHGFDSDLSVNNALVTMYSKC 340
+ M +++ F+SL AC+ L D+G + +++ K+G + L +V + +
Sbjct: 377 DKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRS 436
Query: 341 GSIVDSE-LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
G + ++E + D + W T+++A H AR ++++ +
Sbjct: 437 GCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEEVLRI 484
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 228/445 (51%), Gaps = 22/445 (4%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQH 86
VF F DV+ A + +SR G + A +VF MP KDV +WN+M++ + +G
Sbjct: 147 VFKMGFED-DVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAG 205
Query: 87 SRALFDAMPMKNV----VSWNAMVAGCVQ-NDMLDEAFNYFAAMP---ERNAASYNAMIS 138
+ + + M + V ++ +++ C Q +D+++ + + + + NA+I+
Sbjct: 206 ALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALIN 265
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR------ 192
+ KFGRL DAQ +F +M ++VS+ +I Y ++ + A F M
Sbjct: 266 MYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAY---EQNNDPSTALRFFKGMQLGGIRPD 322
Query: 193 -RNEVSWTVMINGLVENGLYEEAWELFGRMP--QKNVVASTAMITGFCKQGKVDEAWTLF 249
VS T + + L + + R K+VV A++ + K G ++ A T+F
Sbjct: 323 LLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVF 382
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTACASLALL 308
Q+ +D SWN ++TGY QNG EA++ ++ M P+ +VS+ A + + L
Sbjct: 383 DQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGAL 442
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
QG + +A +IK+ D+ V L+ +Y KCG + D+ F + + V WN IIA+
Sbjct: 443 QQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASL 502
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
H +A F M+A V+ D ITF+SLLS C +G +DE F++M +YGI P
Sbjct: 503 GIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPS 562
Query: 429 SEHYACLVDVMSRAGQLQRACEIIR 453
+HY C+VD++ RAG L++A E++R
Sbjct: 563 LKHYGCMVDLLGRAGYLEKAYELVR 587
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 177/368 (48%), Gaps = 29/368 (7%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H L KH DV+ +N I +S+ G + A+ VFD+M +D+V+WNS++ AY
Sbjct: 245 HLHVL----KHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300
Query: 81 SGFPQHSRALFDAMPMK-------NVVSWNAMVAGCVQNDMLDEAFNYFAAMPE---RNA 130
+ P + F M + VVS ++ + + + + + F E ++
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQ-LSDQRISRSILGFVIRREWLDKDV 359
Query: 131 ASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM 190
NA+++ + K G + A +F ++P + +S+ ++ GY + G + A ++ M
Sbjct: 360 VIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYT---QNGLASEAIDAYNMM 416
Query: 191 PR-----RNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGK 241
N+ +W +I G ++ ++ ++ + +V +T +I + K G+
Sbjct: 417 EECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGR 476
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
+++A +LF +I WN +I +GRGEEAL LF M+ ++ D + FVSL +A
Sbjct: 477 LEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSA 536
Query: 302 CASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIV 359
C+ L+D+G++ + ++ K +G L +V + + G + + EL QPD
Sbjct: 537 CSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDAS 596
Query: 360 SWNTIIAA 367
W +++A
Sbjct: 597 IWGALLSA 604
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 14/238 (5%)
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+FG+ +N+V ST +I + G + + + F I ++I SWN +I+ Y + G+ EA
Sbjct: 47 VFGK--SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEA 104
Query: 277 LN----LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
+N LFS ++PD F + AC SL G++ + V K GF+ D+ V +
Sbjct: 105 MNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLV---DGKKVHCCVFKMGFEDDVFVAAS 161
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
LV +YS+ G + + F D+ SWN +I+ F Q+ A ++M GV+ D
Sbjct: 162 LVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMD 221
Query: 393 GITFLSLLSVCCRAGKIDESMN--LFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
IT S+L VC ++ D+ +N L +L V +G+ L+++ S+ G+LQ A
Sbjct: 222 TITVASILPVCAQS---DDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDA 276
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
D F +LF +C ++ + ++ +AL++ G ++ ++ L+ +Y G I S F
Sbjct: 22 DADFNALFNSCVNV---NATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFD 78
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV----GVRPDGITFLSLLSVC 403
+ +I SWN+II+A+ + Y++A + +Q+ ++ +RPD TF +L C
Sbjct: 79 YIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC 134
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 238/485 (49%), Gaps = 57/485 (11%)
Query: 17 STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFD---KMPTKDVVTWNS 73
+T + H L++ ++ V ++ A S +G+++ A +F+ + +V WNS
Sbjct: 42 NTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNS 101
Query: 74 MLTAYWHSGFPQHS-----RALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER 128
++ Y S P S R L+ + N ++ + C + E A +
Sbjct: 102 LIRGYSLSSSPLSSLHLFSRMLYYGV-QPNSHTFPFLFKSCTKAKATHEGKQLHAHALKL 160
Query: 129 ----NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
N + ++I + G + A+ +F + + VS+T +I GYV G + AR
Sbjct: 161 ALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVS---QGCLDDAR 217
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA---------------- 228
LFD +P ++ VSW MI+G V++G +EEA F M + NV+
Sbjct: 218 RLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTR 277
Query: 229 -----------------------STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
+ A+I +CK G+ D A LF I +D+ SWN MI
Sbjct: 278 SGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIG 337
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
GY+ EEAL LF M+R+ ++P+D+ F+ + ACA L LD G+ +A + K+ +S
Sbjct: 338 GYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNS 397
Query: 326 -DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+ S+ +L+ MY+KCG I +E F ++ SWN +++ FA H +A + F +M
Sbjct: 398 SNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEM 457
Query: 385 IAVGV-RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
+ G+ RPD ITF+ +LS C +AG +D F M+ DYGI P+ +HY C++D+++RA
Sbjct: 458 VNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAE 517
Query: 444 QLQRA 448
+ + A
Sbjct: 518 KFEEA 522
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 207/455 (45%), Gaps = 67/455 (14%)
Query: 12 KPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTW 71
K T H H L A HF+ + V+ + +++ ++ G + AR VFDK +D V++
Sbjct: 145 KATHEGKQLHAH-ALKLALHFNPH-VHTSVIHM--YASVGEMDFARLVFDKSSLRDAVSF 200
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
+++T Y G +R LFD +P+K+VVSWNAM++G VQ+ +EA F M E N
Sbjct: 201 TALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVL 260
Query: 132 SYNAMI------SGFIKFGRLCD--AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
+ + G + G L + N+ +ID Y K G A
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKC---GETDIA 317
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS-------------- 229
R LFD + ++ +SW MI G LYEEA LF M + NV +
Sbjct: 318 RELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACL 377
Query: 230 --------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
T++I + K G ++ A +F+ + R++ASWN M
Sbjct: 378 GALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAM 437
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGM-QPDDLIFVSLFTACASLALLDQGRQTY-ALVIKH 321
++G+A +G E AL LFS+MV G+ +PDD+ FV + +AC L+D G Q + +++ +
Sbjct: 438 LSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDY 497
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSY 380
G L ++ + ++ ++E+ +PD W ++++A H R
Sbjct: 498 GISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAH-----GRVE 552
Query: 381 FDQMIA---VGVRPDGITFLSLLS-VCCRAGKIDE 411
F + +A + P+ LLS + AG+ D+
Sbjct: 553 FGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDD 587
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 150/297 (50%), Gaps = 3/297 (1%)
Query: 159 PNVVSYTVMIDGYVKVK--EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
PN ++ + K K G A AL A+ V T +I+ G + A
Sbjct: 129 PNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVH-TSVIHMYASVGEMDFARL 187
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+F + ++ V+ TA+ITG+ QG +D+A LF +I +D+ SWN MI+GY Q+GR EEA
Sbjct: 188 VFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEA 247
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+ F +M + P+ V + +AC + G+ + V +GF S+L + NAL+ M
Sbjct: 248 IVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDM 307
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y KCG + F + D++SWNT+I ++ LY +A + F+ M+ V+P+ +TF
Sbjct: 308 YCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTF 367
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
L +L C G +D + + + + + L+D+ ++ G ++ A + R
Sbjct: 368 LGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFR 424
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 232/451 (51%), Gaps = 26/451 (5%)
Query: 13 PTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWN 72
P P HTHF +H S + + RA N A D+ ++
Sbjct: 81 PNP-----HTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFA----LDRFSFPSLLKAV 131
Query: 73 SMLTAYWHSGFPQHSRA-----LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE 127
S ++A+ H G H A + D ++ AM A C + + +A F M
Sbjct: 132 SKVSAFNH-GLEIHGLASKLGFVDDPFIQTGLI---AMYASCRR---IMDARLLFDKMCH 184
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV-KEGGGIARARAL 186
+A ++N +I G+ + G DA RLF++M ++ +V++ + G ++ R +
Sbjct: 185 PDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTI 244
Query: 187 FDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKV 242
+ + + T +IN G + A +++ + K+++ STAM++G+ K G V
Sbjct: 245 HEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMV 304
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+A +F Q+ RD+ W+ MI+GYA++ + +EAL LF +M++ PD + +S+ +AC
Sbjct: 305 KDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISAC 364
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
+ + L Q + V + GF LSVNNAL+ MY+KCG++V + F + +++SW+
Sbjct: 365 SHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWS 424
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
++I AFA H A F +M V + P+G+TF+ +L C AG ++E LF+ M+++
Sbjct: 425 SMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINE 484
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+GI P EHY C+VD+ RA L++A E+I
Sbjct: 485 HGISPTREHYGCMVDLYCRANFLRKAIELIE 515
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 197/373 (52%), Gaps = 13/373 (3%)
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIK-FGRLCDA 149
F + N + +NA++ CV + ++A ++ M + + S IK L DA
Sbjct: 35 FTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIPSSYSFSSLIKACTLLTDA 94
Query: 150 -------QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMI 202
++K +V T +++ Y + G + AR +FD M R+ +WT MI
Sbjct: 95 VNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSL---GYVCDARKVFDEMSARDVYAWTTMI 151
Query: 203 NGLVENGLYEEAWELFGRMPQ-KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
+ V N E A LF MP+ KN A+I G+ K G ++ F++I +DI SW
Sbjct: 152 SAYVRNNDVESAEILFVEMPEGKNTATWNAVIDGYAKLGNIERVEFFFKEIPSKDIISWT 211
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+++ Y +N R E + LF +MV G + PD++ ++ +ACA L L G++ + ++
Sbjct: 212 TLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGALGFGKEVHFYLMV 271
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
GF D+ + ++L+ MY+KCGS+ S L F + + ++ WN++I A H +A
Sbjct: 272 SGFGIDVYIGSSLIDMYAKCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRM 331
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
F +M G+RP+ +TF+S+L+ C AG I E F M+ DY I P+ EHY C+VD++S
Sbjct: 332 FAEMEREGIRPNRVTFVSVLTACTHAGFIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLS 391
Query: 441 RAGQLQRACEIIR 453
+ G L+ A E+IR
Sbjct: 392 KGGLLEDALEMIR 404
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 164/316 (51%), Gaps = 15/316 (4%)
Query: 68 VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE 127
V +++ Y G+ +R +FD M ++V +W M++ V+N+ ++ A F MPE
Sbjct: 113 VFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAEILFVEMPE 172
Query: 128 -RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARAL 186
+N A++NA+I G+ K G + + FKE+P +++S+T ++ Y+K K G + + L
Sbjct: 173 GKNTATWNAVIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNKRYGEVVK---L 229
Query: 187 FDAMPRR-----NEVSWTVMINGLVENGLYEEAWEL-FGRMPQK---NVVASTAMITGFC 237
F M +EV+ T +I+ G E+ F M +V +++I +
Sbjct: 230 FHEMVNEGKVVPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYA 289
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
K G ++ + +F +++ +++ WN MI G A +G +EAL +F++M R G++P+ + FVS
Sbjct: 290 KCGSLERSLLVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVS 349
Query: 298 LFTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQ 355
+ TAC + +GR+ + +I+ + + +V + SK G + D+ E+ G +
Sbjct: 350 VLTACTHAGFIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFE 409
Query: 356 PDIVSWNTIIAAFAQH 371
P+ W ++ H
Sbjct: 410 PNSFIWGALLNGCKVH 425
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 132/303 (43%), Gaps = 29/303 (9%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPT-KDVVTWNSMLTAYWHSGFPQHSRALF 91
S+ DVY I+A+ R ++ +A +F +MP K+ TWN+++ Y G + F
Sbjct: 140 SARDVYAWTTMISAYVRNNDVESAEILFVEMPEGKNTATWNAVIDGYAKLGNIERVEFFF 199
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRL 146
+P K+++SW +++ ++N E F M + + +IS G L
Sbjct: 200 KEIPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGKVVPDEVAITTVISACAHLGAL 259
Query: 147 CDAQRLFKEMPCP----NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMI 202
+ + + +V + +ID Y K G + R+ +F + +N W MI
Sbjct: 260 GFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKC---GSLERSLLVFYKLKEKNLFCWNSMI 316
Query: 203 NGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQI---RC- 254
+GL +G +EA +F M ++ N V +++T G + E F + C
Sbjct: 317 DGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAGFIQEGRRFFTSMIEDYCI 376
Query: 255 -RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM--QPDDLIFVSLFTACASLALLDQG 311
+ + M+ ++ G E+AL +M+R GM +P+ I+ +L C L+
Sbjct: 377 SPQVEHYGCMVDLLSKGGLLEDAL----EMIR-GMRFEPNSFIWGALLNGCKVHRNLEIA 431
Query: 312 RQT 314
R T
Sbjct: 432 RVT 434
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%)
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
++ A + F QI + +N +I + +AL + M+R+ + P F SL A
Sbjct: 28 INFAISTFTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIPSSYSFSSLIKA 87
Query: 302 CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
C L G+ + V K+GFDS + V LV YS G + D+ F + S D+ +W
Sbjct: 88 CTLLTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYSSLGYVCDARKVFDEMSARDVYAW 147
Query: 362 NTIIAAFAQHVLYYKARSYFDQM 384
T+I+A+ ++ A F +M
Sbjct: 148 TTMISAYVRNNDVESAEILFVEM 170
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 202/386 (52%), Gaps = 26/386 (6%)
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGR 145
+FD M +++V+SWN +V+G N AF F M E N ++ +++S + G
Sbjct: 183 VFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGL 242
Query: 146 LCDAQRLFKEMPCPN----------VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
+ LFK M V+S +DG + KE G D + +N
Sbjct: 243 FDETMELFKVMRIKGIEISGEAVAVVLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNA 302
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
+ + I G L +A ++F + K++V+ A+I+ + G D+A+ +F ++
Sbjct: 303 L---IGIYGKKREDL-GDAHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKS 358
Query: 256 D--------IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
+ + SW+ +I+G+A GR E++L LF QM + + + S+ + CA LA
Sbjct: 359 NGHSPVRPNVISWSAVISGFASKGRLEKSLELFRQMQLAKVMANCVTISSVLSVCAELAA 418
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
L+ GR+ +A I++ D ++ V N LV MY KCG ++ L F D++SWN++I
Sbjct: 419 LNLGRELHAYAIRNLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIGG 478
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
+ H L A FD+MI G+RPD ITF+++LS C AG + NLF+ MV ++ I P
Sbjct: 479 YGMHGLGENAVRTFDEMINAGLRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSIEP 538
Query: 428 RSEHYACLVDVMSRAGQLQRACEIIR 453
EHYAC+VD++ RAG LQ A +I+R
Sbjct: 539 TVEHYACMVDLLGRAGLLQEAHDIVR 564
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIAS--WNIMITGYAQNGRGEEALNLFSQMVRT 286
S +I + + + EA +F +++ WN +I +G A+ ++ QM++
Sbjct: 61 SARLIATYSRFNSISEARKIFTTTPFESLSNLVWNSIIRANVSHGYYNYAVKIYHQMMKF 120
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
G PD + +C+ + + + + V++ GF + + V N LV MY K + D+
Sbjct: 121 GFLPDGFTLPLIIKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDA 180
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F ++SWNT+++ +A + Y A F +M G+ P+ +T+ SLLS R
Sbjct: 181 CKVFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARC 240
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
G DE+M LF +M GI E A ++ V + +QR EI
Sbjct: 241 GLFDETMELFKVM-RIKGIEISGEAVAVVLSVCADMDGVQRGKEI 284
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 131/446 (29%), Positives = 218/446 (48%), Gaps = 52/446 (11%)
Query: 53 ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQ- 111
I A VF+++ ++ V W+ ML Y + +F+ MP+++VV+W +++G +
Sbjct: 154 IREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKR 213
Query: 112 NDMLDEAFNYFAAMPE---------------RNAASYNAMISGFIKFGRLC--------- 147
D + A + F M R A + G + G LC
Sbjct: 214 EDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHG-LCIKDGFDFDN 272
Query: 148 -----------------DAQRLFKEM---PCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
DA+R+++ M C NV +I G V + G + A +F
Sbjct: 273 SVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVAD--SLIGGLVSM---GRVKEAGMIF 327
Query: 188 DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWT 247
+ + +S +MI G +G ++++ +LF +M K++ + MIT + K G++DEA
Sbjct: 328 YGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVK 387
Query: 248 LFQQIRC-RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
LF + + R+ +WN M++GY NG EAL L+ M R ++ F LF ACA L
Sbjct: 388 LFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLC 447
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
QG+ +A + K + ++ V ALV YSKCG + D++ +F P++ +W +I
Sbjct: 448 SFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALIN 507
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
+A H +A S F M+ GV P+ TF+++LS C AG +DE + F+ M +Y I
Sbjct: 508 GYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRIT 567
Query: 427 PRSEHYACLVDVMSRAGQLQRACEII 452
P EHY C+VD++ R+G+++ A E I
Sbjct: 568 PTIEHYTCVVDLLGRSGRVKEAEEFI 593
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 163/389 (41%), Gaps = 103/389 (26%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL--FKE 155
+V+S N +A + L EA + F MP R +S+N MISG+ ++G+ +A L F
Sbjct: 36 HVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMH 95
Query: 156 MPCP--NVVSYTVMI---------------------DGYVKVKEGG-----------GIA 181
C N VS++ + GY + G GI
Sbjct: 96 SSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIR 155
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
A +F+ + N V W++M+ G V+ + +A E+F +MP ++VVA T +I+G+ K+
Sbjct: 156 EAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKR-- 213
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFT 300
++G E AL+LF M R+ + P++ +
Sbjct: 214 ---------------------------EDG-CERALDLFGCMRRSSEVLPNEFTLDCVLR 245
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY------------------SKCGS 342
CA L +L G+ + L IK GFD D SV++AL Y C +
Sbjct: 246 VCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSN 305
Query: 343 IVDSELA--------------FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
+ DS + F ++S N +I +A + K++ F++M
Sbjct: 306 VADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKH 365
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNLFN 417
+ + ++++V + G++DE++ LF+
Sbjct: 366 L----TSLNTMITVYSKNGELDEAVKLFD 390
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 201/473 (42%), Gaps = 83/473 (17%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
V N++IA ++ G + AR +FD+MP + V +WN+M++ Y G + L M
Sbjct: 37 VISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHS 96
Query: 97 K----NVVSWNAMVAGC-----------------------------------VQNDMLDE 117
N VS++A ++ C VQ + E
Sbjct: 97 SCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIRE 156
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
A F + + N ++ M++G+++ + DA +F++MP +VV++T +I GY K ++
Sbjct: 157 AEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRED- 215
Query: 178 GGIARARALFDAMPRRNEV---------------SWTVMINGLVENGL-YEEAWELFGRM 221
G RA LF M R +EV ++ G V +GL ++ ++
Sbjct: 216 -GCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDF---- 270
Query: 222 PQKNVVASTAMITGFCKQGKVDEAWTLFQQI---RCRDIASWNIMITGYAQNGRGEEALN 278
N V S+A+ +C VD+A +++ + C ++A + +I G GR +EA
Sbjct: 271 --DNSV-SSALAEFYCVSDAVDDAKRVYESMVGEACSNVA--DSLIGGLVSMGRVKEA-- 323
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
M+ G++ LI +L A+ Q +++ L K L+ N ++T+YS
Sbjct: 324 ---GMIFYGLRDKTLISNNLMI--KGYAMSGQFKKSKKLFEKMSL-KHLTSLNTMITVYS 377
Query: 339 KCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
K G + ++ F +T + + V+WN++++ + + + +A + M V TF
Sbjct: 378 KNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFS 437
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY--ACLVDVMSRAGQLQRA 448
L C + L H P + Y LVD S+ G L A
Sbjct: 438 VLFRACAYLCSFQQGQLLH---AHLAKTPYQENVYVGTALVDFYSKCGHLADA 487
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 114/218 (52%), Gaps = 5/218 (2%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+V+++ I K GK+ EA +F ++ R ++SWN MI+GY+Q G+ EAL L S M
Sbjct: 36 HVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMH 95
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
+ ++ +++ F + +AC L G+Q ++L+ K G+ V +AL+ Y +C I
Sbjct: 96 SSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIR 155
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS-VC 403
++E+ F + + V W+ ++A + Q + A F++M VR D + + +L+S
Sbjct: 156 EAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKM---PVR-DVVAWTTLISGYA 211
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
R + +++LF M + P C++ V +R
Sbjct: 212 KREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCAR 249
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/434 (31%), Positives = 216/434 (49%), Gaps = 26/434 (5%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
HTH L V H + + LN A + + ++F P D +N+++ + H
Sbjct: 30 HTH-LYVTGLHTHPFFFGKLLLNCAVSISDHVLNYSLRLFHHFPNPDTFMYNTLIRSLSH 88
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF 140
S P L P ++ +L ++F++ A + A+ G
Sbjct: 89 SSTP-----LSSLQPFIQLLR---------HPTLLPDSFSF--AFTLKGIAN-----DGC 127
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
K + F+ ++ T +I Y E G AR +FD M + N V+W
Sbjct: 128 SKRQGIQLHSHAFRHGFDDHIFVGTTLISMYA---ECGCYEYARKVFDEMSQPNVVAWNA 184
Query: 201 MINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
++ G E AW LF RMP +N+ + M+ G+ K G++ A +F +++ RD ASW
Sbjct: 185 VVTACFRCGDVEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASW 244
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+ MI G+A++G +A F +++R +P ++ + +ACA + G+ + + K
Sbjct: 245 STMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEK 304
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARS 379
GF +SVNNAL+ YSKCG++ ++L F S + IVSW ++IAA A H +A
Sbjct: 305 AGFLCIVSVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAALAMHGRADEAIR 364
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
F +M GVRPDG+TF+SLL C +G +++ LF+ M + YGI P EHY C+VD+
Sbjct: 365 VFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLY 424
Query: 440 SRAGQLQRACEIIR 453
RA +LQ+A E IR
Sbjct: 425 GRAARLQKAYEFIR 438
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 167/328 (50%), Gaps = 18/328 (5%)
Query: 55 AARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDM 114
A R FD + ++++ Y G +++R +FD M NVV+WNA+V C +
Sbjct: 139 AFRHGFDD----HIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGD 194
Query: 115 LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV 174
++ A+ F MP RN S+N M++G++K G+L A+R+F EM + S++ MI G+ K
Sbjct: 195 VEGAWGLFERMPVRNLTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTMIVGFAK- 253
Query: 175 KEGGGIARARALFDAMPR-RN---EVSWTVMINGLVENGLYEEAWELFGRMPQKN----V 226
G A F + R RN EVS T +++ + G +E L G M + V
Sbjct: 254 --SGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIV 311
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRD-IASWNIMITGYAQNGRGEEALNLFSQMVR 285
+ A+I + K G VD A +FQ + I SW MI A +GR +EA+ +F +M
Sbjct: 312 SVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAALAMHGRADEAIRVFHEMEE 371
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIV 344
+G++PD + F+SL AC+ L++QG ++ + +G + + +V +Y + +
Sbjct: 372 SGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQ 431
Query: 345 DS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ E P+++ W T++ A + H
Sbjct: 432 KAYEFIRQMPILPNVIIWRTLLGACSIH 459
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 243/472 (51%), Gaps = 51/472 (10%)
Query: 12 KPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTW 71
K + + HTH L K S + + L I + + IT AR++FD+MP + +VTW
Sbjct: 15 KSLTTLKSLHTHIL----KSGSLFSFFGHKL-IDGYIKCSVITEARKLFDEMPNRHIVTW 69
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
NSM++++ G + + L+D M + V+ + + AF+ E A
Sbjct: 70 NSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFK------AFSEMGVSREGQKA 123
Query: 132 SYNAMISGF---------------IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE 176
A++ GF KFG++ DA+ +F + +VV +T +I GY +
Sbjct: 124 HGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGY---NQ 180
Query: 177 GGGIARARALFDAM--PRRNEVSWTV------------MINGLVENGLYEEAWELFGRMP 222
G A +F+ M R +T+ ++NG + +GL ++
Sbjct: 181 RGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKS-------G 233
Query: 223 QKNVVAS-TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
++VVAS T+++T + K V+++ +F + +W I G QNGR E AL++F
Sbjct: 234 LESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFR 293
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+M+R + P+ F S+ AC+SLA+L+ G Q +A+ +K G D + V+ AL+ +Y KCG
Sbjct: 294 EMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCG 353
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
++ + F ++ D+VS NT+I A+AQ+ ++A F++M +G +P+ +TF+S+L
Sbjct: 354 NVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILL 413
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
C AG ++E +F+L+ +++ I +HY C++D++ RA + + A +I
Sbjct: 414 ACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIE 465
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 185/401 (46%), Gaps = 21/401 (5%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
F D + A + +++ G + AR VFD++ KDVV + +++ Y G + +F
Sbjct: 132 FEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVF 191
Query: 92 DAMP----MKNVVSWNAMVAGCVQ-NDMLDEAFNYFAAMP---ERNAASYNAMISGFIKF 143
+ M N + +++ C D+++ + + E AS ++++ + K
Sbjct: 192 EDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKC 251
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNEVSWT 199
+ D+ ++F + + V++T I G V + G A ++F M R N +++
Sbjct: 252 NMVEDSIKVFNSLAYASHVTWTSFIVGLV---QNGREEIALSMFREMIRCSISPNHFTFS 308
Query: 200 VMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
+++ + E ++ + N A+I + K G V++A ++F+ +
Sbjct: 309 SILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTEL 368
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
D+ S N MI YAQNG G EAL LF +M + G +P+ + F+S+ AC + L+++G Q +
Sbjct: 369 DVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIF 428
Query: 316 ALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+L+ H + ++ + + ++ + + PD++ W T++ A H
Sbjct: 429 SLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEV 488
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
A + +M+ R DG T + L ++ AGK D + +
Sbjct: 489 EMAEKFMKKMLDQAPR-DGGTHILLTNIYASAGKWDNVIEM 528
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 234/437 (53%), Gaps = 25/437 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ + I +++ G + A +VF + P DVV W S+++ Y SG P+ + A F M
Sbjct: 141 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 200
Query: 96 MKNVVSWN-----AMVAGCVQ--NDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRL 146
+ VS + ++ + C Q N L + + F + N+++ + K G +
Sbjct: 201 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 260
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM-PRRNEVSWTVMINGL 205
+A LF+EM +++S++ M+ Y + G LF+ M +R + +W +++ L
Sbjct: 261 KNASNLFREMSDKDIISWSTMVACYA---DNGAETDVLDLFNEMLDKRIKPNWVTVVSVL 317
Query: 206 --------VENGL-YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+E G+ E +G + V STA++ + K ++A LF ++ +D
Sbjct: 318 RACACISNLEEGMKIHELAVNYGFEMETTV--STALMDMYMKCFSPEKAVDLFNRMPKKD 375
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ +W ++ +GYA NG E++ +F M+ +G +PD + V + T + L +L Q +A
Sbjct: 376 VIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHA 435
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
VIK+GF+++ + +L+ +Y+KC SI D+ F + D+V+W++IIAA+ H +
Sbjct: 436 FVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEE 495
Query: 377 ARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
A F QM +P+ +TF+S+LS C +G I E +N+F++MV+ Y + P SEHYA +
Sbjct: 496 ALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIM 555
Query: 436 VDVMSRAGQLQRACEII 452
VD++ R G+L A ++I
Sbjct: 556 VDLLGRMGELDMALDVI 572
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 211/429 (49%), Gaps = 26/429 (6%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM-----------P 95
++R +I A ++F + P + V WN++L +Y G + +LF M P
Sbjct: 46 YARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERP 105
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQRLF 153
VS ++ +L + + F + + +A+I + K G++ DA ++F
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF 165
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMINGLVEN 208
E P P+VV +T +I GY ++ G A A F M +VS + + +
Sbjct: 166 MEYPKPDVVLWTSIISGY---EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 222
Query: 209 GLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
++ + G + +K + + +++ + K G + A LF+++ +DI SW+ M+
Sbjct: 223 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV 282
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
YA NG + L+LF++M+ ++P+ + VS+ ACA ++ L++G + + L + +GF+
Sbjct: 283 ACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 342
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+ +V+ AL+ MY KC S + F + + D+++W + + +A + + +++ F M
Sbjct: 343 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNM 402
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
++ G RPD I + +L+ G + +++ L ++ + G A L++V ++
Sbjct: 403 LSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFIGASLIEVYAKCSS 461
Query: 445 LQRACEIIR 453
++ A ++ +
Sbjct: 462 IEDANKVFK 470
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 234/437 (53%), Gaps = 25/437 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ + I +++ G + A +VF + P DVV W S+++ Y SG P+ + A F M
Sbjct: 141 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 200
Query: 96 MKNVVSWN-----AMVAGCVQ--NDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRL 146
+ VS + ++ + C Q N L + + F + N+++ + K G +
Sbjct: 201 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 260
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM-PRRNEVSWTVMINGL 205
+A LF+EM +++S++ M+ Y + G LF+ M +R + +W +++ L
Sbjct: 261 KNASNLFREMSDKDIISWSTMVACYA---DNGAETDVLDLFNEMLDKRIKPNWVTVVSVL 317
Query: 206 --------VENGL-YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+E G+ E +G + V STA++ + K ++A LF ++ +D
Sbjct: 318 RACACISNLEEGMKIHELAVNYGFEMETTV--STALMDMYMKCFSPEKAVDLFNRMPKKD 375
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ +W ++ +GYA NG E++ +F M+ +G +PD + V + T + L +L Q +A
Sbjct: 376 VIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHA 435
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
VIK+GF+++ + +L+ +Y+KC SI D+ F + D+V+W++IIAA+ H +
Sbjct: 436 FVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEE 495
Query: 377 ARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
A F QM +P+ +TF+S+LS C +G I E +N+F++MV+ Y + P SEHYA +
Sbjct: 496 ALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIM 555
Query: 436 VDVMSRAGQLQRACEII 452
VD++ R G+L A ++I
Sbjct: 556 VDLLGRMGELDMALDVI 572
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 211/429 (49%), Gaps = 26/429 (6%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM-----------P 95
++R +I A ++F + P + V WN++L +Y G + +LF M P
Sbjct: 46 YARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERP 105
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQRLF 153
VS ++ +L + + F + + +A+I + K G++ DA ++F
Sbjct: 106 DNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVF 165
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMINGLVEN 208
E P P+VV +T +I GY ++ G A A F M +VS + + +
Sbjct: 166 MEYPKPDVVLWTSIISGY---EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 222
Query: 209 GLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
++ + G + +K + + +++ + K G + A LF+++ +DI SW+ M+
Sbjct: 223 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV 282
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
YA NG + L+LF++M+ ++P+ + VS+ ACA ++ L++G + + L + +GF+
Sbjct: 283 ACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFE 342
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+ +V+ AL+ MY KC S + F + + D+++W + + +A + + +++ F M
Sbjct: 343 METTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNM 402
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
++ G RPD I + +L+ G + +++ L ++ + G A L++V ++
Sbjct: 403 LSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFIGASLIEVYAKCSS 461
Query: 445 LQRACEIIR 453
++ A ++ +
Sbjct: 462 IEDANKVFK 470
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 234/437 (53%), Gaps = 25/437 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ + I +++ G + A +VF + P DVV W S+++ Y SG P+ + A F M
Sbjct: 111 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 170
Query: 96 MKNVVSWN-----AMVAGCVQ--NDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRL 146
+ VS + ++ + C Q N L + + F + N+++ + K G +
Sbjct: 171 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 230
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM-PRRNEVSWTVMINGL 205
+A LF+EM +++S++ M+ Y + G LF+ M +R + +W +++ L
Sbjct: 231 KNASNLFREMSDKDIISWSTMVACYA---DNGAETDVLDLFNEMLDKRIKPNWVTVVSVL 287
Query: 206 --------VENGL-YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+E G+ E +G + V STA++ + K ++A LF ++ +D
Sbjct: 288 RACACISNLEEGMKIHELAVNYGFEMETTV--STALMDMYMKCFSPEKAVDLFNRMPKKD 345
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ +W ++ +GYA NG E++ +F M+ +G +PD + V + T + L +L Q +A
Sbjct: 346 VIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHA 405
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
VIK+GF+++ + +L+ +Y+KC SI D+ F + D+V+W++IIAA+ H +
Sbjct: 406 FVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEE 465
Query: 377 ARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
A F QM +P+ +TF+S+LS C +G I E +N+F++MV+ Y + P SEHYA +
Sbjct: 466 ALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIM 525
Query: 436 VDVMSRAGQLQRACEII 452
VD++ R G+L A ++I
Sbjct: 526 VDLLGRMGELDMALDVI 542
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 210/432 (48%), Gaps = 26/432 (6%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM--------- 94
I + +I A ++F + P + V WN++L +Y G + +LF M
Sbjct: 13 IGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIE 72
Query: 95 --PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQ 150
P VS ++ +L + + F + + +A+I + K G++ DA
Sbjct: 73 ERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAV 132
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMINGL 205
++F E P P+VV +T +I GY ++ G A A F M +VS + +
Sbjct: 133 KVFMEYPKPDVVLWTSIISGY---EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 189
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
+ ++ + G + +K + + +++ + K G + A LF+++ +DI SW+
Sbjct: 190 AQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWS 249
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
M+ YA NG + L+LF++M+ ++P+ + VS+ ACA ++ L++G + + L + +
Sbjct: 250 TMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNY 309
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
GF+ + +V+ AL+ MY KC S + F + + D+++W + + +A + + +++ F
Sbjct: 310 GFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVF 369
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
M++ G RPD I + +L+ G + +++ L ++ + G A L++V ++
Sbjct: 370 RNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFIGASLIEVYAK 428
Query: 442 AGQLQRACEIIR 453
++ A ++ +
Sbjct: 429 CSSIEDANKVFK 440
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 170/355 (47%), Gaps = 29/355 (8%)
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN 160
S++ ++ +Q + A F P R +NA++ + G + LF++M +
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 161 VVSYTVMIDGY---VKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL 217
VS D Y + +K G+ + ++ G V +G ++
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRK------------------LLLGKVIHGFLKKV--- 106
Query: 218 FGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
R+ V S A+I + K G++++A +F + D+ W +I+GY Q+G E AL
Sbjct: 107 --RIDGDMFVGS-ALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELAL 163
Query: 278 NLFSQMVRT-GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
FS+MV + + PD + VS+ +ACA L+ GR + V + G D+ L + N+L+ +
Sbjct: 164 AFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHL 223
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y K GSI ++ F + S DI+SW+T++A +A + F++M+ ++P+ +T
Sbjct: 224 YGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTV 283
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+S+L C ++E M + L V +YG + L+D+ + ++A ++
Sbjct: 284 VSVLRACACISNLEEGMKIHELAV-NYGFEMETTVSTALMDMYMKCFSPEKAVDL 337
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 234/437 (53%), Gaps = 25/437 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ + I +++ G + A +VF + P DVV W S+++ Y SG P+ + A F M
Sbjct: 111 DMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMV 170
Query: 96 MKNVVSWN-----AMVAGCVQ--NDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRL 146
+ VS + ++ + C Q N L + + F + N+++ + K G +
Sbjct: 171 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 230
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM-PRRNEVSWTVMINGL 205
+A LF+EM +++S++ M+ Y + G LF+ M +R + +W +++ L
Sbjct: 231 KNASNLFREMSDKDIISWSTMVACYA---DNGAETDVLDLFNEMLDKRIKPNWVTVVSVL 287
Query: 206 --------VENGL-YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+E G+ E +G + V STA++ + K ++A LF ++ +D
Sbjct: 288 RACACISNLEEGMKIHELAVNYGFEMETTV--STALMDMYMKCFSPEKAVDLFNRMPKKD 345
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ +W ++ +GYA NG E++ +F M+ +G +PD + V + T + L +L Q +A
Sbjct: 346 VIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHA 405
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
VIK+GF+++ + +L+ +Y+KC SI D+ F + D+V+W++IIAA+ H +
Sbjct: 406 FVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEE 465
Query: 377 ARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
A F QM +P+ +TF+S+LS C +G I E +N+F++MV+ Y + P SEHYA +
Sbjct: 466 ALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIM 525
Query: 436 VDVMSRAGQLQRACEII 452
VD++ R G+L A ++I
Sbjct: 526 VDLLGRMGELDMALDVI 542
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 210/432 (48%), Gaps = 26/432 (6%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM--------- 94
I + +I A ++F + P + V WN++L +Y G + +LF M
Sbjct: 13 IGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIE 72
Query: 95 --PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQ 150
P VS ++ +L + + F + + +A+I + K G++ DA
Sbjct: 73 ERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAV 132
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMINGL 205
++F E P P+VV +T +I GY ++ G A A F M +VS + +
Sbjct: 133 KVFMEYPKPDVVLWTSIISGY---EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASAC 189
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
+ ++ + G + +K + + +++ + K G + A LF+++ +DI SW+
Sbjct: 190 AQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWS 249
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
M+ YA NG + L+LF++M+ ++P+ + VS+ ACA ++ L++G + + L + +
Sbjct: 250 TMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNY 309
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
GF+ + +V+ AL+ MY KC S + F + + D+++W + + +A + + +++ F
Sbjct: 310 GFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVF 369
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
M++ G RPD I + +L+ G + +++ L ++ + G A L++V ++
Sbjct: 370 RNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKN-GFENNQFIGASLIEVYAK 428
Query: 442 AGQLQRACEIIR 453
++ A ++ +
Sbjct: 429 CSSIEDANKVFK 440
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 170/355 (47%), Gaps = 29/355 (8%)
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN 160
S++ ++ +Q + A F P R +NA++ + G + LF++M +
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 161 VVSYTVMIDGY---VKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL 217
VS D Y + +K G+ + ++ G V +G ++
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRK------------------LLLGKVIHGFLKKV--- 106
Query: 218 FGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
R+ V S A+I + K G++++A +F + D+ W +I+GY Q+G E AL
Sbjct: 107 --RIDGDMFVGS-ALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELAL 163
Query: 278 NLFSQMVRT-GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
FS+MV + + PD + VS+ +ACA L+ GR + V + G D+ L + N+L+ +
Sbjct: 164 AFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHL 223
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y K GSI ++ F + S DI+SW+T++A +A + F++M+ ++P+ +T
Sbjct: 224 YGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTV 283
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+S+L C ++E M + L V +YG + L+D+ + ++A ++
Sbjct: 284 VSVLRACACISNLEEGMKIHELAV-NYGFEMETTVSTALMDMYMKCFSPEKAVDL 337
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 154/570 (27%), Positives = 251/570 (44%), Gaps = 127/570 (22%)
Query: 5 IIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMP 64
++++I R H +++ KH +VY N I + + G++ A++V + M
Sbjct: 139 VVLNICCGLGDLELGRQVHGMVL--KHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMT 196
Query: 65 TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFN 120
KD V+WNS++TA +G + L + M + NVV+W+A++ G N E+
Sbjct: 197 QKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVE 256
Query: 121 YFAAM------PE-RNAASY--------------------------------NAMISGFI 141
FA M P+ R AS NA++ +
Sbjct: 257 LFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYR 316
Query: 142 KFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNEVS 197
+ G + A ++F + SY MI GY+ E G + +A+ LF M + R+ +S
Sbjct: 317 RCGDMKSAFKIFSKFARKCAASYNTMIVGYL---ENGNVGKAKELFYQMEQEGVERDRIS 373
Query: 198 WTVMINGLVENGLYEEAWELF------GRMP----------------------------- 222
W MI+G V+N ++++A LF G P
Sbjct: 374 WNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAI 433
Query: 223 ----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA---------- 268
Q N A++ +CK + A F +I RD ++WN +I+GYA
Sbjct: 434 VKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRE 493
Query: 269 -------------------------QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
+N + + A+ LF++M + ++PD + AC+
Sbjct: 494 LVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACS 553
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNT 363
LA + +G+Q +A I+ G+DSD + LV MY+KCGSI + + S P++V N
Sbjct: 554 KLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNA 613
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY 423
++ A+A H + F +M+ VRPD +TFLS+LS C AG I F LM Y
Sbjct: 614 MLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLM-ETY 672
Query: 424 GIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
I P +HY C+VD++SRAG+L A ++I+
Sbjct: 673 NITPTLKHYTCMVDLLSRAGKLDEAYQLIK 702
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 110/214 (51%), Gaps = 3/214 (1%)
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM- 288
T ++ + ++AW +F ++ +++ SW ++ + G + LF + + G+
Sbjct: 70 TKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLG 129
Query: 289 -QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
+ D +F + C L L+ GRQ + +V+KHGF +++ V NAL+ MY KCGS+ +++
Sbjct: 130 EKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAK 189
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
+Q D VSWN+II A + + Y+A + M+ + P+ +T+ +++
Sbjct: 190 KVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNA 249
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
ES+ LF MV G+ P + A ++ SR
Sbjct: 250 YDVESVELFARMV-GAGVAPDARTLASVLPACSR 282
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
L G+Q ++ IK GF + V L+ MYS S D+ F + + ++ SW ++
Sbjct: 47 LTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHMFDKMTLKNLHSWTAVLRL 106
Query: 368 FAQHVLYYKARSYFDQMI--AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
L+YK F++ + +G + D F +L++CC G ++ + MV +G
Sbjct: 107 HLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHG-MVLKHGF 165
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEIIR 453
L+D+ + G L A +++
Sbjct: 166 VTNVYVGNALIDMYGKCGSLDEAKKVLE 193
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/422 (30%), Positives = 214/422 (50%), Gaps = 13/422 (3%)
Query: 44 IAAFSRAGNITAARQVFD---KMPTKD-VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
I+A S G + R V KM V+ +++ AY + +R LFD MP +N+
Sbjct: 192 ISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNL 251
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
V+WN M+ G + ++DEA F + +++ S+ MI G+I+ GRL +A +++ M
Sbjct: 252 VTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQT 311
Query: 160 NVVSYTVMIDGYVKV-KEGGGIARARALFDAMPRRNEVSW----TVMINGLVENGLYEEA 214
VMI V G I L + +R + T +I G+ + A
Sbjct: 312 GHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLA 371
Query: 215 WELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
F + ++ + A+ GF K G +D A F ++ RD+ SW+ MI+GYAQ+ +
Sbjct: 372 CLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPK 431
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
AL LF +M+ G++P+++ VS+F+A A+L L +G+ + + + ++ AL+
Sbjct: 432 MALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALI 491
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVS---WNTIIAAFAQHVLYYKARSYFDQMIAVGVRP 391
MY+KCGSI +S L F + ++ S WN II A H F M ++P
Sbjct: 492 DMYAKCGSI-NSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKP 550
Query: 392 DGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ ITF+ +LS CC AG ++ +F M Y + P +HY C++D++ RAG L+ A E+
Sbjct: 551 NPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEM 610
Query: 452 IR 453
IR
Sbjct: 611 IR 612
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/498 (27%), Positives = 224/498 (44%), Gaps = 61/498 (12%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAK---HFSSYDVYRANLN-IAAFSRAGNITAAR 57
L I S KP P HF+ +F H + +D A ++ + + S I+ R
Sbjct: 20 LRHISTSTFTKPNPQ------HFIHIFTNARNHQNHHDSELALVSALKSCSSLSFISQGR 73
Query: 58 QV----FDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQND 113
Q+ F + NS++ Y G ++++ LFD + VS N MV+G V+N
Sbjct: 74 QIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNG 133
Query: 114 MLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM-PCPNVVSYTVMIDGYV 172
+D A F MP + SY MI GF++ G +A +FK+M C V + +++
Sbjct: 134 QIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVIS 193
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE-----NGLYEEAWELFGRMPQKNVV 227
G + R + + + V ++ L+ +G+ EA LF MP++N+V
Sbjct: 194 ACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGV-REARRLFDEMPERNLV 252
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
M+ G+ K G VDEA LF I +D+ SW MI GY Q GR EAL ++ M++TG
Sbjct: 253 TWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTG 312
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG------ 341
P++++ V+L +AC + G Q + V+K GFD + ++ Y+ CG
Sbjct: 313 HGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLAC 372
Query: 342 ------------------------SIVDSEL-AFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
++D L F + D+ SW+T+I+ +AQ
Sbjct: 373 LQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKM 432
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY----GIPPRSEHY 432
A F +M+A G++P+ +T +S+ S G + E + H+Y IP
Sbjct: 433 ALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGK-----LAHEYMRSESIPFNDNLR 487
Query: 433 ACLVDVMSRAGQLQRACE 450
A L+D+ ++ G + A +
Sbjct: 488 AALIDMYAKCGSINSALQ 505
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 167/382 (43%), Gaps = 54/382 (14%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK--- 97
N+ + +++ G + AR++FD + KDV++W +M+ Y G + + ++ AM
Sbjct: 255 NVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHG 314
Query: 98 -NVVSWNAMVAGCVQN-----------------------------------DMLDEAFNY 121
N V +V+ C + M+D A
Sbjct: 315 PNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQ 374
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
F + + S+NA+ +GFIK G + A + F +M +V S++ MI GY + +
Sbjct: 375 FEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHP---K 431
Query: 182 RARALFDAM----PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS----TAMI 233
A LF M + NEV+ + + + G +E M +++ + A+I
Sbjct: 432 MALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALI 491
Query: 234 TGFCKQGKVDEAWTLFQQIR--CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
+ K G ++ A F QIR ++ WN +I G A +G L +FS M R ++P+
Sbjct: 492 DMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPN 551
Query: 292 DLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE-LA 349
+ F+ + +AC L++ G++ + + + + D+ ++ + + G + ++E +
Sbjct: 552 PITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMI 611
Query: 350 FGQTSQPDIVSWNTIIAAFAQH 371
+ DIV W T++AA H
Sbjct: 612 RSMPMEADIVIWGTLLAACRTH 633
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 134/408 (32%), Positives = 209/408 (51%), Gaps = 18/408 (4%)
Query: 60 FDKMPTKDVVTWNSMLTAYWHSGFPQ------HSRALFDAMPMKNVVSWNAMVAGCVQND 113
FD + D N+++ +Y S P + R + ++P N ++ ++ CV +
Sbjct: 76 FDHLHHPDAFLCNTIIRSYLRSSNPSAAFHFYYHRMIAKSVP-PNHYTFPLILKLCVDHG 134
Query: 114 MLDEAFNYFAAMPERNAAS----YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMID 169
E A + + S N++I + FGR+ DA+ +F E ++VSY MID
Sbjct: 135 CKLEGEKGHARVVKFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMID 194
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS 229
GYVK GGI AR LFD M R+ SW MI G V G A ELF MP K+VV+
Sbjct: 195 GYVK---NGGIRDARKLFDEMYERDVFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVSW 251
Query: 230 TAMITGFCKQGKVDEAWTLFQQ---IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT 286
MI G + G V A F Q + R++ SWN ++ + + E L +F +M+ +
Sbjct: 252 NCMIDGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMES 311
Query: 287 G-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
G P++ VS+ TACA+L L+ G ++ + + D+ + L+TMY+KCG++
Sbjct: 312 GEAMPNEATLVSVLTACANLGKLNLGLWVHSYIKSNEIKLDVLLETCLLTMYAKCGAMDL 371
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
+ F + IVSWN++I + H KA F +M G +P+ TF+ +LS C
Sbjct: 372 ASDVFVEMPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQKPNEATFICVLSACSH 431
Query: 406 AGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
AG + E F+LM Y I P+ EHY C+VD+++RAG ++ + E+I
Sbjct: 432 AGMVMEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFVKNSEELIE 479
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 191/380 (50%), Gaps = 19/380 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ N I +S G I AR +F + D+V++N+M+ Y +G + +R LFD M
Sbjct: 154 DLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMIDGYVKNGGIRDARKLFDEMY 213
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
++V SWN M+AG V L A F AMP ++ S+N MI G ++ G + A F +
Sbjct: 214 ERDVFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVSWNCMIDGCVRVGNVSLALEFFNQ 273
Query: 156 MP---CPNVVSYTVMIDGYVKVKEGGGIARARALF----DAMPRRNEVSWTVMIN----- 203
M NVVS+ ++ +V++K G R +AMP NE + ++
Sbjct: 274 MDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAMP--NEATLVSVLTACANL 331
Query: 204 GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
G + GL+ ++ + + +V+ T ++T + K G +D A +F ++ + I SWN M
Sbjct: 332 GKLNLGLWVHSY-IKSNEIKLDVLLETCLLTMYAKCGAMDLASDVFVEMPVKSIVSWNSM 390
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HG 322
I GY +G G++AL +F++M + G +P++ F+ + +AC+ ++ +G + L+ + +
Sbjct: 391 IMGYGLHGNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMVMEGWWYFDLMRRVYK 450
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYF 381
+ + +V + ++ G + +SE + S + W +++ H+ A +
Sbjct: 451 IEPKVEHYGCMVDLLARAGFVKNSEELIEKVSVKGGSAMWGALLSGCRTHLDLELAENVA 510
Query: 382 DQMIAVGVRPDGITFLSLLS 401
++ V + P I+ LLS
Sbjct: 511 KRL--VELEPQDISPYILLS 528
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 231/468 (49%), Gaps = 63/468 (13%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
+A +++ G + A+++FD M +D V WN+M++ + +G ++ FDAM V
Sbjct: 225 MAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSL 284
Query: 100 VSWNAMVAGCVQNDMLDEAFN------YFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
V+WN +++ Q D A + +F P+ ++ +MISGF + GR+ A L
Sbjct: 285 VTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPD--VYTWTSMISGFTQKGRISHALDLL 342
Query: 154 KEM---------------------------------------PCPNVVSYTVMIDGYVKV 174
KEM NV+ +ID Y K
Sbjct: 343 KEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKC 402
Query: 175 KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVAST 230
G + A+ +FD M R+ SW +I G + G +A ELF +M + N++
Sbjct: 403 ---GDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWN 459
Query: 231 AMITGFCKQGKVDEAWTLFQQIRC-----RDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
MITG+ + G D+A LF+ I R+ ASWN +I+G+ Q+G+ ++AL +F M
Sbjct: 460 IMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQF 519
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
+ P+ + +S+ CA+L + ++ + ++ S+LSV+N L+ Y+K G+++
Sbjct: 520 CHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMY 579
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
S+ F + S D VSWN++++++ H A F QM G++P+ TF S+L
Sbjct: 580 SKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGH 639
Query: 406 AGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
AG +DE ++F+ + DY + EHY+ +V ++ R+G+L A + I+
Sbjct: 640 AGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQ 687
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 189/393 (48%), Gaps = 13/393 (3%)
Query: 74 MLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY 133
+++ Y G +R +F+ M ++N+ +W+AM+ GC +N E F AM
Sbjct: 123 LVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPD 182
Query: 134 NAMISGFIKFGRLC---DAQRLFKEMPCPNVVSYTVMIDGYVKV--KEGGGIARARALFD 188
++ ++ C + RL M + ++ + + + G + A+ +FD
Sbjct: 183 EFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFD 242
Query: 189 AMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS----TAMITGFCKQGKVDE 244
M R+ V+W MI+G +NG +A + F M + V S +I+ + + G D
Sbjct: 243 CMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDL 302
Query: 245 AWTLFQQIR----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
A L +++ D+ +W MI+G+ Q GR AL+L +M G++ +++ S +
Sbjct: 303 AIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAAS 362
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
ACA+L L G + +++ +K ++ V N+L+ MY KCG + ++ F S+ D+ S
Sbjct: 363 ACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYS 422
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
WN+II + Q KA F +M P+ IT+ +++ ++G D++++LF +
Sbjct: 423 WNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIE 482
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
D + + L+ ++GQ +A +I R
Sbjct: 483 KDGKTKRNAASWNSLISGFVQSGQKDKALQIFR 515
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 71/328 (21%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF---- 91
+V N I + + G++ AA+ +FD M +DV +WNS++ Y+ +GF + LF
Sbjct: 388 NVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQ 447
Query: 92 --DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFG 144
D+ P N+++WN M+ G +Q+ D+A + F ++ +RNAAS+N++ISGF++ G
Sbjct: 448 ESDSPP--NIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSG 505
Query: 145 RLCDAQRLFKEMP-----------------CPNVVS----------------------YT 165
+ A ++F+ M C N+V+
Sbjct: 506 QKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSN 565
Query: 166 VMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------G 219
++ID Y K G + ++ +F+ + ++ VSW M++ V +G E A +LF G
Sbjct: 566 LLIDSYAK---SGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQG 622
Query: 220 RMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC-----RDIASWNIMITGYAQNGRGE 274
P + AS + G G VDE ++F I + + ++ M+ ++G+
Sbjct: 623 LQPNRGTFASILLAYG--HAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLA 680
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTAC 302
EAL+ M ++P+ ++ +L TAC
Sbjct: 681 EALDFIQSM---PIEPNSSVWGALLTAC 705
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 142/283 (50%), Gaps = 8/283 (2%)
Query: 178 GGIARARALFDAMP----RRNEVSWTVMINGLVENG---LYEEAWELFGRMPQKNVVAST 230
G ++ A + D++ R +++ ++ ++ + +E G + N T
Sbjct: 62 GSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHSRIGLVENVNPFVET 121
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
+++ + K G + A +F ++ R++ +W+ MI G ++N E + LF M+R G+ P
Sbjct: 122 KLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLP 181
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
D+ + + AC L+ GR +++VI+ G + N+++ +Y+KCG + ++ F
Sbjct: 182 DEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIF 241
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
+ D V+WN +I+ F Q+ +A+ YFD M GV P +T+ L+S + G D
Sbjct: 242 DCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCD 301
Query: 411 ESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+++L M +GI P + ++ ++ G++ A ++++
Sbjct: 302 LAIDLMRKM-EWFGIAPDVYTWTSMISGFTQKGRISHALDLLK 343
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 205 bits (522), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 222/428 (51%), Gaps = 15/428 (3%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DVY N I ++ GN+ +A +VF + D+V+WN++L Y + G + ++D MP
Sbjct: 179 DVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLAGYVNLGDVVEAECVYDKMP 238
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
++N ++ N+M+ + + +A + F + ++ S++AMIS + + G +A LF +
Sbjct: 239 VRNTIASNSMIVLFGKEGCIAKARSLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVD 298
Query: 156 MPC----------PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
M + +S + + G+A + D + +N +I+
Sbjct: 299 MNANGVMVDEVVVVSAISACTSLSAVRMGRSVHGLAAKIGIQDYVSLQN-----ALIHLY 353
Query: 206 VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
G +A ++F ++V+ +MI+G+ G V++A LF + +D+ SW+ MI+
Sbjct: 354 SNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMIS 413
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
GYAQ+G EA+ LF +M G++PD+ VS+ +AC +A LD G+ +A + K+ F+
Sbjct: 414 GYAQHGCFSEAVALFQEMQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNV 473
Query: 326 DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI 385
++ + LV MY KCG + ++ F + + +WN +I A + L K+ + F M
Sbjct: 474 NVILGTTLVDMYMKCGCVENALEVFYAMEEKGVSTWNALILGLAMNGLVEKSLNVFADMK 533
Query: 386 AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
P+ ITF+ +L C G +DE F+ M ++ I P +HY C+VD++ RAG L
Sbjct: 534 KTKTLPNEITFMGVLGACRHMGLVDEGRRYFSSMTQEHKIEPNVKHYGCMVDLLGRAGLL 593
Query: 446 QRACEIIR 453
+ A E+I
Sbjct: 594 KEAEELIE 601
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 198/446 (44%), Gaps = 85/446 (19%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+ N +A + G++ A V+DKMP ++ + NSM+ + G +R+LFD +
Sbjct: 210 DLVSWNTLLAGYVNLGDVVEAECVYDKMPVRNTIASNSMIVLFGKEGCIAKARSLFDRIE 269
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY---------------------- 133
K++VSW+AM++ QN M +EA F M
Sbjct: 270 GKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMGRS 329
Query: 134 -----------------NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE 176
NA+I + G + DAQ++F ++VS+ MI GY+
Sbjct: 330 VHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMC-- 387
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------PQK------ 224
G + A+ LFD+M ++ VSW+ MI+G ++G + EA LF M P +
Sbjct: 388 -GYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETAIVSV 446
Query: 225 ---------------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
NV+ T ++ + K G V+ A +F + + +
Sbjct: 447 ISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEKGV 506
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA- 316
++WN +I G A NG E++LN+F+ M +T P+++ F+ + AC + L+D+GR+ ++
Sbjct: 507 STWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYFSS 566
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSE-LAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
+ +H + ++ +V + + G + ++E L PD+ +W ++ A +H
Sbjct: 567 MTQEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIESMPMAPDVATWGALLGACRKHHNNE 626
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLS 401
++I ++PD F LLS
Sbjct: 627 MGERLGRKLIQ--LQPDHDGFHVLLS 650
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
Query: 248 LFQQIRCRDIASWNIMITGYAQ-NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
+F + + WN ++ + + + ++ALN + + PD + L +C +
Sbjct: 100 IFNHLHNPNTFIWNTIMRSHLELHNSPQQALNFYKLFLFQNTSPDHYTYPILLRSCTARV 159
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
+G+Q + V+K GFDSD+ V N L+ +Y+ CG++V + F ++ D+VSWNT++A
Sbjct: 160 SEPEGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWNTLLA 219
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN 417
+ +A +D+M VR + I S++ + + G I ++ +LF+
Sbjct: 220 GYVNLGDVVEAECVYDKM---PVR-NTIASNSMIVLFGKEGCIAKARSLFD 266
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 214/401 (53%), Gaps = 34/401 (8%)
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
K PT + N ++ Y+ G +R +FD M ++N+ SWN M++G V+ M+ +A
Sbjct: 77 KRPTTLIA--NHLIHMYFCCGDYVRARKVFDKMDVRNLYSWNNMISGYVKLGMMKQARGV 134
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP--CP--NVVSYTVMIDGYVKVKEG 177
F MPE++ S+NAM+ G+ GR +A R + M C N ++ ++ VK+KE
Sbjct: 135 FYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYGWMRRVCVGYNEFTFASVLIVCVKLKE- 193
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLV--------------ENGLYEEAWELFGRMPQ 223
F+ ++ V++ G + + G E+A LF M
Sbjct: 194 ---------FELC---RQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKMEDAMRLFDDMTV 241
Query: 224 KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
+++ A T +++G+ G +D A +F Q+ ++ SW +I GYA+NG +AL +F +M
Sbjct: 242 RDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKM 301
Query: 284 VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSI 343
+ ++PD+ F S ACA++A L G+Q +A ++++ + V +A+V MY+KCGS+
Sbjct: 302 IMHRVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVVSAVVDMYAKCGSM 361
Query: 344 VDSELAFGQTSQ-PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ F T D+V WNT+I+A A + +A + M+ GV+P+ T +++L+
Sbjct: 362 ETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLMLNDMLKSGVKPNRNTLVAILNA 421
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
C +G + + + F M +D+G+ P EHYA L+D++ RAG
Sbjct: 422 CSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGRAG 462
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 168/388 (43%), Gaps = 85/388 (21%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
AN I + G+ AR+VFDKM +++ +WN+M++ Y G + +R +F MP K+
Sbjct: 84 ANHLIHMYFCCGDYVRARKVFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDC 143
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN------------------------- 134
VSWNAMV G EA ++ M R YN
Sbjct: 144 VSWNAMVVGYAHCGRFSEALRFYGWM-RRVCVGYNEFTFASVLIVCVKLKEFELCRQIHG 202
Query: 135 -AMISGFI--------------KFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGG 179
++ GF+ K G++ DA RLF +M ++ ++T ++ GY G
Sbjct: 203 QVVVVGFLSNVVVSSSIVDAYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALC---GD 259
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------PQK--------- 224
+ A +F MP++N SWT +I G NG+ +A +F +M P +
Sbjct: 260 MDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFA 319
Query: 225 ------------------------NVVASTAMITGFCKQGKVDEAWTLFQ-QIRCRDIAS 259
N V +A++ + K G ++ A +F +D+
Sbjct: 320 CATIASLKHGKQIHAFLLRNNIRPNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVL 379
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALV 318
WN MI+ A G G+EA+ + + M+++G++P+ V++ AC+ L+ G Q + ++
Sbjct: 380 WNTMISALAHYGYGKEAVLMLNDMLKSGVKPNRNTLVAILNACSHSGLVCDGLQFFKSMT 439
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDS 346
HG DL L+ + + G V+S
Sbjct: 440 NDHGVIPDLEHYAHLIDLLGRAGCFVES 467
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 121/296 (40%), Gaps = 30/296 (10%)
Query: 46 AFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAM 105
A+++ G + A ++FD M +D+ W ++++ Y G + +F MP KN SW A+
Sbjct: 222 AYAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTAL 281
Query: 106 VAGCVQNDMLDEAFNYFAAM------PER---NAASYNAMISGFIKFGRLCDAQRLFKEM 156
+ G +N M +A F M P+ ++ + +K G+ A L +
Sbjct: 282 IGGYARNGMAHKALGVFRKMIMHRVRPDEFTFSSCLFACATIASLKHGKQIHA-FLLRNN 340
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-WTVMINGLVENGLYEEAW 215
PN V + ++D Y K G + AR +F+ +V W MI+ L G +EA
Sbjct: 341 IRPNPVVVSAVVDMYAKC---GSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAV 397
Query: 216 ELFGRM------PQKNVVASTAMITGFCKQGKVDEAWTLFQQIR-----CRDIASWNIMI 264
+ M P +N + A++ G V + F+ + D+ + +I
Sbjct: 398 LMLNDMLKSGVKPNRNTL--VAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLI 455
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+ G E++ + +P D + SL C + GR+ +IK
Sbjct: 456 DLLGRAGCFVESMK---DLFMIDCKPGDHVLYSLLCVCRPNGSIGVGREVAEFLIK 508
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 164/277 (59%), Gaps = 3/277 (1%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFC 237
G + A +LFD + + V+W+ +I G G + A +LF MP++++V+ MITG+
Sbjct: 157 GDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYV 216
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
KQG+++ A LF + +D+ SWN MI GY G ++AL LF++M R G+ PD++ +S
Sbjct: 217 KQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLS 276
Query: 298 LFTACASLALLDQGRQTYALV--IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
L +ACA L L+ G++ +A V I G S L + NAL+ MY+KCG+I +S F +
Sbjct: 277 LLSACADLGDLENGKKVHAKVMEISMGKLSTL-LGNALIDMYAKCGNIKESLDVFWSITD 335
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
D++SWN++I A H ++ S F M + P+ ITF+ +L C AG+IDE
Sbjct: 336 KDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKY 395
Query: 416 FNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
F+LM +Y I P H C+VD++ RAG L+ A + I
Sbjct: 396 FDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFI 432
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 168/348 (48%), Gaps = 28/348 (8%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
+V F S V R L + ++ G++ A +FD DVV W+S++ Y G +
Sbjct: 133 MVLRLGFGSNAVVRNTL-LVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLK 191
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGR 145
+R LF+ MP +++VSWN M+ G V+ ++ A F P ++ S+NAMI+G++ G
Sbjct: 192 VARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGL 251
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
A LF EM RA D + + +S + G
Sbjct: 252 SKQALELFNEM------------------------CRAGVFPDEVTLLSLLSACADL-GD 286
Query: 206 VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
+ENG A + M + + + A+I + K G + E+ +F I +D+ SWN +I
Sbjct: 287 LENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVISWNSVIV 346
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV-IKHGFD 324
G A +G G+E+L+LF M RT + P+++ FV + AC+ +D+G + + L+ ++ +
Sbjct: 347 GMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIE 406
Query: 325 SDLSVNNALVTMYSKCGSIVD-SELAFGQTSQPDIVSWNTIIAAFAQH 371
++ +V M + G + + ++ +P+ + W T++AA H
Sbjct: 407 PNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVH 454
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 114/237 (48%), Gaps = 15/237 (6%)
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
ST+++ + A LF QI D +N+MI G +Q+ A++L+++M R +
Sbjct: 45 STSLVGPTATPTVTNYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFV 104
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
+ D F + AC L ++ G + +V++ GF S+ V N L+ ++KCG + +
Sbjct: 105 KGDSYTFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATS 164
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGK 408
F + + D+V+W+++IA +A+ AR F++M D +++ +++ + G+
Sbjct: 165 LFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEM----PERDLVSWNVMITGYVKQGE 220
Query: 409 IDESMNLF-----------NLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
++ + LF N M+ Y + S+ L + M RAG ++ L
Sbjct: 221 MESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSL 277
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 146/468 (31%), Positives = 232/468 (49%), Gaps = 45/468 (9%)
Query: 6 IVSIALKPTPSSTARHTHFLLVF-AKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMP 64
I ++ LK P + H L+F HFS+ N+ A ++FD MP
Sbjct: 29 IHALFLKHLPQNAPHHFFNRLLFRVLHFSA--------------EKSNLYYAHKLFDTMP 74
Query: 65 T-KDVVTWNSMLTAYW--HSGFPQHSRALFDAMPMKNVV----SWNAMVAGCVQNDMLDE 117
+ W S++ A+ H+ F H + F M K ++ +++ ++ C + E
Sbjct: 75 NCSNCFIWTSLIRAFLSHHTHFC-HCISTFARMHQKGILPSGFTFSLVLNACGRVPAGFE 133
Query: 118 AFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK 173
A + + N A++ + K G +CDA+ +F + +VV++T MI GY K
Sbjct: 134 GKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVAWTAMICGYAK 193
Query: 174 VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMI 233
G + AR LFD M RN +WT M+ G G + A EL+ M K+ V AMI
Sbjct: 194 ---AGRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDEVTWVAMI 250
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWN-----IMITGYAQNGRGEEALNLFSQMVRTGM 288
G+ K G V EA +F +I WN ++ YAQNG EA+ ++ +M R +
Sbjct: 251 AGYGKLGNVSEARRIFDEI----TVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKI 306
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALV--IKHGF-DSDLSVNNALVTMYSKCGSIVD 345
+ D+ V +ACA L + R + +L I+ GF + V+NAL+ M SKCG+I
Sbjct: 307 KVTDVAMVGAISACAQLRDI---RMSNSLTYNIEEGFCEKTHIVSNALIHMQSKCGNIDL 363
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
+ F D+ +++ +IAAFA+H A F +M G++P+ +TF+ +L+ C
Sbjct: 364 AWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACST 423
Query: 406 AGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+G I+E F +M YGI P EHY C+VD++ RAGQL++A +I+
Sbjct: 424 SGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIK 471
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 231/463 (49%), Gaps = 35/463 (7%)
Query: 6 IVSIALKPTPSSTARHTHFLLVF-AKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMP 64
I ++ LK P + H L+F HFS+ N+ A ++FD MP
Sbjct: 29 IHALFLKHLPQNAPHHFFDRLLFRVLHFSA--------------EKSNLYYAHKLFDTMP 74
Query: 65 T-KDVVTWNSMLTAYW-HSGFPQHSRALFDAMPMKNVV----SWNAMVAGCVQNDMLDEA 118
+ W S++ A+ H +H + F M K ++ ++++++ C + + E
Sbjct: 75 NCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFTFSSVLNACGRVPAVFEG 134
Query: 119 FNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV 174
A + + N A++ + K G +CDA+ +F M +VV++T MI GY K
Sbjct: 135 KQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVAWTAMICGYAK- 193
Query: 175 KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMIT 234
G + AR LFD M RN +WT M+ G G + A EL+ M K V AMI
Sbjct: 194 --AGRMVDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKEEVTWVAMIA 251
Query: 235 GFCKQGKVDEAWTLFQQIRCR-DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
G+ K G V EA +F +I + ++ ++ YAQNG EA+ ++ +M R ++ D+
Sbjct: 252 GYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDV 311
Query: 294 IFVSLFTACASLALLDQGRQTYALV--IKHGF-DSDLSVNNALVTMYSKCGSIVDSELAF 350
V +ACA L + R + L I+ GF + V+NAL+ M SKCG+I + F
Sbjct: 312 AMVGAISACAQLRDI---RMSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREF 368
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
D+ +++ +IAAFA+H A F +M G+ P+ +TF+ +L+ C +G I+
Sbjct: 369 NIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIE 428
Query: 411 ESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
E F +M YGI P EHY C+VD++ RAGQL++A +I+
Sbjct: 429 EGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIK 471
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 233/437 (53%), Gaps = 25/437 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ + I +++ G + A +VF + P DVV W S+++ Y SG P+ + A F M
Sbjct: 49 DMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMV 108
Query: 96 MKNVVSWN-----AMVAGCVQ--NDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRL 146
+ VS + ++ + C Q N L + + F + N+++ + K G +
Sbjct: 109 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 168
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF-DAMPRRNEVSWTVMINGL 205
+A LF+EM +++S++ M Y + G LF + + +R + +W +++ L
Sbjct: 169 KNASNLFREMSDKDIISWSTMFACYA---DNGAETDVLDLFIEMLDKRIKPNWVTVVSVL 225
Query: 206 --------VENGL-YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+E G+ E +G + V STA++ + K ++A F ++ +D
Sbjct: 226 RACACISNLEEGMKIHELAVNYGFEMETTV--STALMDMYMKCFSPEKAVDFFNRMPKKD 283
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ +W ++ +GYA NG E++ +F M+ +G +PD + V + T + L +L Q +A
Sbjct: 284 VIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHA 343
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
VIK+GF+++ + +L+ +Y+KC SI D+ F + D+V+W++IIAA+ H +
Sbjct: 344 FVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEE 403
Query: 377 ARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
A +F QM +P+ +TF+S+LS C +G I E +N+F++MV+ Y + P SEHYA +
Sbjct: 404 ALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIM 463
Query: 436 VDVMSRAGQLQRACEII 452
VD++ R G+L A ++I
Sbjct: 464 VDLLGRMGELDMALDLI 480
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 169/329 (51%), Gaps = 13/329 (3%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
+A+I + K G++ DA +F E P P+VV +T ++ GY ++ G A A F M
Sbjct: 54 SALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGY---EQSGSPELALAFFSRMVVS 110
Query: 194 NEVS-----WTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDE 244
+VS + + + ++ + G + +K + + +++ + K G +
Sbjct: 111 EKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKN 170
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A LF+++ +DI SW+ M YA NG + L+LF +M+ ++P+ + VS+ ACA
Sbjct: 171 ASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACAC 230
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
++ L++G + + L + +GF+ + +V+ AL+ MY KC S + F + + D+++W +
Sbjct: 231 ISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVL 290
Query: 365 IAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
+ +A + + +++ F M++ G RPD I + +L+ G + +++ F+ V G
Sbjct: 291 FSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAV-CFHAFVIKNG 349
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
A L++V ++ ++ A ++ +
Sbjct: 350 FENNQFIGASLIEVYAKCSSIEDANKVFK 378
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
+PD+ +CA L L G+ + + K D+D+ V +AL+ +Y+KCG + D+
Sbjct: 12 KPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVE 71
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM-IAVGVRPDGITFLSLLSVCCRAG 407
F + +PD+V W +I++ + Q A ++F +M ++ V PD +T +S+ S C +
Sbjct: 72 VFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLS 131
Query: 408 K---------------IDESMNLFNLMVHDYG 424
+D + L N ++H YG
Sbjct: 132 NFKLGRSVHGFVKRKGLDNKLCLANSLLHLYG 163
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 233/437 (53%), Gaps = 25/437 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ + I +++ G + A +VF + P DVV W S+++ Y SG P+ + A F M
Sbjct: 141 DMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMV 200
Query: 96 MKNVVSWN-----AMVAGCVQ--NDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRL 146
+ VS + ++ + C Q N L + + F + N+++ + K G +
Sbjct: 201 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 260
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF-DAMPRRNEVSWTVMINGL 205
+A LF+EM +++S++ M Y + G LF + + +R + +W +++ L
Sbjct: 261 KNASNLFREMSDKDIISWSTMFACYA---DNGAETDVLDLFIEMLDKRIKPNWVTVVSVL 317
Query: 206 --------VENGL-YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+E G+ E +G + V STA++ + K ++A F ++ +D
Sbjct: 318 RACACISNLEEGMKIHELAVNYGFEMETTV--STALMDMYMKCFSPEKAVDFFNRMPKKD 375
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ +W ++ +GYA NG E++ +F M+ +G +PD + V + T + L +L Q +A
Sbjct: 376 VIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHA 435
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
VIK+GF+++ + +L+ +Y+KC SI D+ F + D+V+W++IIAA+ H +
Sbjct: 436 FVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEE 495
Query: 377 ARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
A +F QM +P+ +TF+S+LS C +G I E +N+F++MV+ Y + P SEHYA +
Sbjct: 496 ALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIM 555
Query: 436 VDVMSRAGQLQRACEII 452
VD++ R G+L A ++I
Sbjct: 556 VDLLGRMGELDMALDLI 572
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 213/431 (49%), Gaps = 30/431 (6%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS----- 101
++R +I A ++F + P K V WN++L +Y G + +LF MKNV S
Sbjct: 46 YARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLF--CQMKNVCSVSIEE 103
Query: 102 ----WNAMVA--GC--VQNDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQR 151
++ +A C ++ +L + + F + + +A+I + K G++ DA
Sbjct: 104 KPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVE 163
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMINGLV 206
+F E P P+VV +T ++ GY ++ G A A F M +VS + +
Sbjct: 164 VFMEYPKPDVVLWTSIVSGY---EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACA 220
Query: 207 ENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+ ++ + G + +K + + +++ + K G + A LF+++ +DI SW+
Sbjct: 221 QLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWST 280
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
M YA NG + L+LF +M+ ++P+ + VS+ ACA ++ L++G + + L + +G
Sbjct: 281 MFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG 340
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
F+ + +V+ AL+ MY KC S + F + + D+++W + + +A + + +++ F
Sbjct: 341 FEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFR 400
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
M++ G RPD I + +L+ G + +++ F+ V G A L++V ++
Sbjct: 401 NMLSSGTRPDAIALVKILTTVSELGILQQAV-CFHAFVIKNGFENNQFIGASLIEVYAKC 459
Query: 443 GQLQRACEIIR 453
++ A ++ +
Sbjct: 460 SSIEDANKVFK 470
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/437 (28%), Positives = 233/437 (53%), Gaps = 25/437 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ + I +++ G + A +VF + P DVV W S+++ Y SG P+ + A F M
Sbjct: 141 DMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMV 200
Query: 96 MKNVVSWN-----AMVAGCVQ--NDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRL 146
+ VS + ++ + C Q N L + + F + N+++ + K G +
Sbjct: 201 VSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSI 260
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF-DAMPRRNEVSWTVMINGL 205
+A LF+EM +++S++ M Y + G LF + + +R + +W +++ L
Sbjct: 261 KNASNLFREMSDKDIISWSTMFACYA---DNGAETDVLDLFIEMLDKRIKPNWVTVVSVL 317
Query: 206 --------VENGL-YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+E G+ E +G + V STA++ + K ++A F ++ +D
Sbjct: 318 RACACISNLEEGMKIHELAVNYGFEMETTV--STALMDMYMKCFSPEKAVDFFNRMPKKD 375
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ +W ++ +GYA NG E++ +F M+ +G +PD + V + T + L +L Q +A
Sbjct: 376 VIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQAVCFHA 435
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
VIK+GF+++ + +L+ +Y+KC SI D+ F + D+V+W++IIAA+ H +
Sbjct: 436 FVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEE 495
Query: 377 ARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
A +F QM +P+ +TF+S+LS C +G I E +N+F++MV+ Y + P SEHYA +
Sbjct: 496 ALKFFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIM 555
Query: 436 VDVMSRAGQLQRACEII 452
VD++ R G+L A ++I
Sbjct: 556 VDLLGRMGELDMALDLI 572
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 213/431 (49%), Gaps = 30/431 (6%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS----- 101
++R +I A ++F + P K V WN++L +Y G + +LF MKNV S
Sbjct: 46 YARYASIHHAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLF--CQMKNVCSVSIEE 103
Query: 102 ----WNAMVA--GC--VQNDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQR 151
++ +A C ++ +L + + F + + +A+I + K G++ DA
Sbjct: 104 KPDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVE 163
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMINGLV 206
+F E P P+VV +T ++ GY ++ G A A F M +VS + +
Sbjct: 164 VFMEYPKPDVVLWTSIVSGY---EQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACA 220
Query: 207 ENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+ ++ + G + +K + + +++ + K G + A LF+++ +DI SW+
Sbjct: 221 QLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWST 280
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
M YA NG + L+LF +M+ ++P+ + VS+ ACA ++ L++G + + L + +G
Sbjct: 281 MFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYG 340
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
F+ + +V+ AL+ MY KC S + F + + D+++W + + +A + + +++ F
Sbjct: 341 FEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFR 400
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
M++ G RPD I + +L+ G + +++ F+ V G A L++V ++
Sbjct: 401 NMLSSGTRPDAIALVKILTTVSELGILQQAV-CFHAFVIKNGFENNQFIGASLIEVYAKC 459
Query: 443 GQLQRACEIIR 453
++ A ++ +
Sbjct: 460 SSIEDANKVFK 470
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 213/426 (50%), Gaps = 47/426 (11%)
Query: 74 MLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE------ 127
++ +Y+ G + + LFD MP ++V++W +M+ G + A+N F M
Sbjct: 47 LIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPN 106
Query: 128 --------RNAASYNAMISG------FIKFGR-----------------LCD----AQRL 152
+ S A++ G IK G CD A+ +
Sbjct: 107 AFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLV 166
Query: 153 FKEMPCPNVVSYTVMIDGYVKVKEG-GGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
F+++ N VS+T +I GY ++ GG+ R +F + S+++ ++ G
Sbjct: 167 FEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSS 226
Query: 212 EEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
++ + + N+ A++ +C+ EA LF ++ +D +WN +I G+
Sbjct: 227 NLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGF 286
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+ E+L +FSQMV G P+ F S+ ACA+LA+L G+Q + +I G D++L
Sbjct: 287 -ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNL 345
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
++NAL+ MY+KCG++ DS F ++VSW +++ + H +A F++M+
Sbjct: 346 ELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGS 405
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G++PD I F+++LS C AG +DE + F LM Y + P + YAC+VD++SRAG+++
Sbjct: 406 GIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKE 465
Query: 448 ACEIIR 453
A E+I
Sbjct: 466 AYELIE 471
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 222 PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
P+ +T +I + +G +EA TLF ++ RD+ +W MITGY A N+F+
Sbjct: 37 PKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFT 96
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD-SDLSVNNALVTMYSK- 339
M+R G++P+ ++ AC SL L G+ + L IK G S + V+NAL+ MY+
Sbjct: 97 NMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATC 156
Query: 340 CGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSL 399
C S+ ++ L F + VSW T+I + + F QM +F
Sbjct: 157 CDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIA 216
Query: 400 LSVCCRAG 407
+S C G
Sbjct: 217 VSACASIG 224
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 27/268 (10%)
Query: 4 SIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKM 63
SI VS S+ + H ++ S+ V A L++ + R + A+Q+F +M
Sbjct: 214 SIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDM--YCRCRCASEAKQLFGEM 271
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAF 119
KD +TWN+++ + + S +F M + N ++ +++A C +L
Sbjct: 272 TQKDTITWNTLIAGF-ETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQ 330
Query: 120 NYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK 175
+ R N NA+I + K G + D+ ++F M N+VS+T M+ GY
Sbjct: 331 QLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHG 390
Query: 176 EGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEAWELFGRM-------PQK 224
G A LF+ M + +++ + +++ GL +E F M P +
Sbjct: 391 HG---KEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDR 447
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQI 252
++ A ++ + G+V EA+ L + +
Sbjct: 448 DIYA--CVVDLLSRAGRVKEAYELIENM 473
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N I +++ GN+ + ++F M ++V+W SM+ Y G + + LF+ M +
Sbjct: 348 SNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGI 407
Query: 100 ----VSWNAMVAGCVQNDMLDEAFNYFAAM-------PERNAASYNAMISGFIKFGRLCD 148
+ + A+++ C ++DE YF M P+R+ Y ++ + GR+ +
Sbjct: 408 KPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDI--YACVVDLLSRAGRVKE 465
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARAL 186
A L + MP S V + G K + I + AL
Sbjct: 466 AYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAAL 503
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 217/435 (49%), Gaps = 53/435 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D + N+++ Y +G + + +F M + VSWNA++AGCV ++ D A M
Sbjct: 218 DQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMK 277
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEM-PCP-------NVVSYTVMIDGYVKVKEGG 178
+ + +S +K + L +++ C ++ +ID Y K +
Sbjct: 278 KSGSCPNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEM-- 335
Query: 179 GIARARALFDAMPRRNEV-SWTVMINGLVENGLYEEAWELFGRMPQKNV----------- 226
+ AR +D MP ++ + + +I+G + G E+A LF + +N+
Sbjct: 336 -MDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVL 394
Query: 227 --VASTAMITGFCKQ------------------------GK---VDEAWTLFQQIRCRDI 257
VAS I CKQ GK +DEA +F++ D+
Sbjct: 395 KSVASLQQIK-VCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDL 453
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++ MIT Y+Q+G EEAL L+ QM ++PD + SL ACA+L+ +QG+Q +
Sbjct: 454 VAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVH 513
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
IK GF SD+ +N+LV MY+KCGSI D++ AF + Q IVSW+ +I AQH +A
Sbjct: 514 AIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEA 573
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
F+QM+ V P+ IT +S+L C AG ++E F M +GI P EH+AC++D
Sbjct: 574 LIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMID 633
Query: 438 VMSRAGQLQRACEII 452
++ R+G+L A E++
Sbjct: 634 LLGRSGKLNEAVELV 648
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 5/208 (2%)
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
L Q R + SW+ +I+ Y QNG +EAL F++M G++ ++ F ++ AC+
Sbjct: 39 LDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKD 98
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
L+ G++ +A+ + GF+SD V+N LV MY+KCG DS+ FG +P +VSWN + +
Sbjct: 99 LNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSC 158
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC--RAGKIDESMNLFNLMVHDYGI 425
Q + F +M+ VRP+ + +L+ C R G I +++ LM +G+
Sbjct: 159 HVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGL-LMKLGHGL 217
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEIIR 453
S + LVD+ ++AG+++ A ++ R
Sbjct: 218 DQFSAN--ALVDMYAKAGRIEDAVDVFR 243
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 183/368 (49%), Gaps = 25/368 (6%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDK-MPTKDVVTWNSMLTAYW 79
HTH L+ F FS + R +L + +S + A + D+ + VV+W+++++ Y
Sbjct: 4 HTH-LIKFG--FSRHSSLRNHL-LTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYV 59
Query: 80 HSGFPQHSRALFDAMPM----KNVVSWNAMVAGC-VQNDM-LDEAFNYFAAMP--ERNAA 131
+GF + + F+ M N ++ ++ C ++ D+ + + + + E +A
Sbjct: 60 QNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAF 119
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
N ++ + K G+ D+++LF + P VVS+ + +V + +A LF M
Sbjct: 120 VSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHV---QSDFLAETVDLFKRMV 176
Query: 192 ----RRNEVSWTVMIN---GLVENGLYEEAWELFGRMPQK-NVVASTAMITGFCKQGKVD 243
R NE S ++++N GL + G+ L ++ + ++ A++ + K G+++
Sbjct: 177 EGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIE 236
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
+A +F+++ D SWN +I G + + AL L ++M ++G P+ S ACA
Sbjct: 237 DAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACA 296
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD-IVSWN 362
++ L D GRQ ++ +K DSDL V L+ +YSKC + D+ A+ D I++ N
Sbjct: 297 AMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGN 356
Query: 363 TIIAAFAQ 370
+I+ ++Q
Sbjct: 357 ALISGYSQ 364
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 169/365 (46%), Gaps = 36/365 (9%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKD-VVTWNSMLTAYWHSGFPQHSRALF 91
S D++ A I +S+ + AR+ +D MPTKD ++ N++++ Y G + + +LF
Sbjct: 316 SDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLF 375
Query: 92 DAMPMKNV-------------VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMIS 138
+ +N+ V+ + C Q L ++ + N+++
Sbjct: 376 FELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYS-----DFYVINSLLD 430
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRN 194
+ K + +A ++F+E ++V+YT MI Y + G A L+ M + +
Sbjct: 431 TYGKCSHIDEASKIFEERTWEDLVAYTSMITAY---SQHGDAEEALKLYLQMQVADIKPD 487
Query: 195 EVSWTVMINGLVENGLYEEAWEL------FGRMPQKNVVASTAMITGFCKQGKVDEAWTL 248
+ ++N YE+ +L FG M ++ AS +++ + K G +++A
Sbjct: 488 PFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMS--DIFASNSLVNMYAKCGSIEDADRA 545
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F +I R I SW+ MI G AQ+G G+EAL +F+QM++ + P+ + VS+ AC L+
Sbjct: 546 FSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLV 605
Query: 309 DQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIA 366
++G+Q + + K G + ++ + + G + ++ EL + D W ++
Sbjct: 606 NEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLG 665
Query: 367 AFAQH 371
A H
Sbjct: 666 AARIH 670
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 110/276 (39%), Gaps = 52/276 (18%)
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMP------------------------------ 222
R VSW+ +I+ V+NG ++EA F M
Sbjct: 46 RTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKV 105
Query: 223 ---------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
+ + S ++ + K G+ ++ LF I + SWN + + + Q+
Sbjct: 106 HAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFL 165
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
E ++LF +MV ++P++ + ACA L GR + L++K G D NAL
Sbjct: 166 AETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANAL 225
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
V MY+K G I D+ F + PD VSWN IIA H A ++M G P+
Sbjct: 226 VDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNV 285
Query: 394 ITFLSLLSVCCRAG-------------KIDESMNLF 416
T S L C G KID +LF
Sbjct: 286 FTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLF 321
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 198/440 (45%), Gaps = 65/440 (14%)
Query: 69 VTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER 128
V S+L Y G + S +F+ M N VSWNAM++G N + +AF++ M E
Sbjct: 205 VVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIEN 264
Query: 129 NAASYNAMISGFIK-FGRLCDAQRLFKEMPCPNVVSY-------------TVMIDGYVKV 174
+ K G L D R C V Y T +I+ Y K
Sbjct: 265 GVSPNKTTFLCISKAVGLLGDINR------CHEVHRYAYEWGLDSNTSVGTALINMYSKC 318
Query: 175 KEGGGIARARALFDAMPRRNEVS--WTVMINGLVENGLYEEAWELFGRMPQKNVVAS--- 229
G + AR LFD+ V+ W MI G + G + EA E+F RM Q +V
Sbjct: 319 ---GVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYT 375
Query: 230 -------------------------------------TAMITGFCKQGKVDEAWTLFQQI 252
A+ + K ++ +F ++
Sbjct: 376 FCCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEISVLNALADAYVKCESLEAGEKVFYKM 435
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
+DI SW M+T Y Q +AL +FSQM G P+ F S+ TAC L LL+ G+
Sbjct: 436 EKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYGQ 495
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
Q + L+ K D++ + +AL+ MYSKCG++ +++ F + S PD V+W II+ +AQH
Sbjct: 496 QIHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERISNPDTVTWTAIISTYAQHG 555
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY 432
L A F +M V+ + +T L +L C G +++ + +FN M YG+ P EHY
Sbjct: 556 LVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEIFNQMEGTYGVVPEMEHY 615
Query: 433 ACLVDVMSRAGQLQRACEII 452
AC+VD++ R G+L A I
Sbjct: 616 ACVVDLLGRVGRLDEAVAFI 635
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/438 (27%), Positives = 195/438 (44%), Gaps = 56/438 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
++V N ++ AY +R +FD M +NV SW M+ ++ A F M
Sbjct: 102 NLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMML 161
Query: 127 ER----NAASYNAMISGFIK-----FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
E+ + +++A++ + FG + AQ + + VV T +++ Y K+
Sbjct: 162 EQGLLLDGFAFSAVLQSCVGLDSVVFGEMVHAQVVVRGFLMHAVVG-TSLLNLYAKL--- 217
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------GRMPQK------- 224
G + +F+ M N+VSW MI+G NGLY +A++ G P K
Sbjct: 218 GMCECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCIS 277
Query: 225 --------------------------NVVASTAMITGFCKQGKVDEAWTLFQQ--IRCRD 256
N TA+I + K G + +A LF C
Sbjct: 278 KAVGLLGDINRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLV 337
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
A WN MITGY+Q G EAL +F++M + ++PD F +F + A L L ++ +
Sbjct: 338 NAPWNAMITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHG 397
Query: 317 LVIKHGFDS-DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
+ +K GFD+ ++SV NAL Y KC S+ E F + + DIVSW T++ A+ Q +
Sbjct: 398 VALKCGFDAMEISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWG 457
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
KA + F QM G P+ TF S+++ C ++ + L+ + S + L
Sbjct: 458 KALAIFSQMCNEGFAPNHFTFSSVITACGGLCLLEYGQQIHGLIC-KASLDAESCIESAL 516
Query: 436 VDVMSRAGQLQRACEIIR 453
+D+ S+ G L A I
Sbjct: 517 IDMYSKCGNLTEAKNIFE 534
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 1/226 (0%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+ N+V ++ + K D A +F + R++ SW +MI ++G AL LF
Sbjct: 100 RDNLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCM 159
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M+ G+ D F ++ +C L + G +A V+ GF V +L+ +Y+K G
Sbjct: 160 MLEQGLLLDGFAFSAVLQSCVGLDSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGM 219
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
S F + + VSWN +I+ F + LY +A + MI GV P+ TFL +
Sbjct: 220 CECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKA 279
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
G I+ + +++G+ + L+++ S+ G L A
Sbjct: 280 VGLLGDINRCHEVHRY-AYEWGLDSNTSVGTALINMYSKCGVLCDA 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 129/286 (45%), Gaps = 50/286 (17%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
F + ++ N A+ + ++ A +VF KM KD+V+W +M+TAY + A+F
Sbjct: 404 FDAMEISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIF 463
Query: 92 DAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC 147
M + N ++++++ C +L+ Y I G I L
Sbjct: 464 SQMCNEGFAPNHFTFSSVITACGGLCLLE----------------YGQQIHGLICKASL- 506
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
DA+ + + +ID Y K G + A+ +F+ + + V+WT +I+ +
Sbjct: 507 DAESCIE----------SALIDMYSKC---GNLTEAKNIFERISNPDTVTWTAIISTYAQ 553
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGFC------KQGKVDEAWTLFQQIR-----CRD 256
+GL E+A +LF +M Q V A+ +T C G V++ +F Q+ +
Sbjct: 554 HGLVEDALQLFRKMEQSAVKANA--VTLLCILFACSHGGMVEDGLEIFNQMEGTYGVVPE 611
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ + ++ + GR +EA+ +M ++PD++++ +L AC
Sbjct: 612 MEHYACVVDLLGRVGRLDEAVAFIDKM---PIEPDEMVWQTLLGAC 654
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 18/198 (9%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NV 99
I +S+ GN+T A+ +F+++ D VTW ++++ Y G + + LF M N
Sbjct: 517 IDMYSKCGNLTEAKNIFERISNPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANA 576
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAM-------PERNAASYNAMISGFIKFGRLCDAQRL 152
V+ ++ C M+++ F M PE Y ++ + GRL +A
Sbjct: 577 VTLLCILFACSHGGMVEDGLEIFNQMEGTYGVVPEME--HYACVVDLLGRVGRLDEAVAF 634
Query: 153 FKEMPC-PNVVSYTVMIDGYVKVKEGG--GIARARALFDAMPRRNEVSWTVMI-NGLVEN 208
+MP P+ + + ++ G ++ G A+ + P S V++ N +E+
Sbjct: 635 IDKMPIEPDEMVWQTLL-GACRIHGNAELGETAAQKILSTQPEPEHSSTYVLLSNTYIES 693
Query: 209 GLYEEAWELFGRMPQKNV 226
GL E+ L M ++ +
Sbjct: 694 GLLEDGIGLRDVMKERGI 711
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF-DSD-LSVNNALVTMYSKCGSIVDS 346
QP+ + L +C L Q + V+K GF D D L N +V YSKC +
Sbjct: 63 QPNIQPLIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSA 122
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F S+ ++ SW +I A +H Y A F M+ G+ DG F ++L C
Sbjct: 123 RKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGL 182
Query: 407 GKIDESMNLFNLMVH 421
+ +F MVH
Sbjct: 183 DSV-----VFGEMVH 192
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 239/531 (45%), Gaps = 111/531 (20%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S D Y A+ I + + G AR+VFD MP ++VV W +++ Y G + + +LF
Sbjct: 101 STDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQ 160
Query: 94 MPMKNV----------------VSWNAMVAGC-----------VQNDM---------LDE 117
M + + V + + GC + N M +++
Sbjct: 161 MRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIED 220
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP----------NVVSYTV- 166
F M R+ S+N+++S + + G LC+ L K M +V+S V
Sbjct: 221 CRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVS 280
Query: 167 -------------------MIDGYVKVK------EGGGIARARALFDAMPRRNEVSWTVM 201
++D +++ +GG I A +F+ ++ V WT M
Sbjct: 281 TGDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAM 340
Query: 202 INGLVENGLYEEAWELFGRM------PQKNVVAST------------------------- 230
I+GLV+N ++A +F +M P +AS
Sbjct: 341 ISGLVQNENADKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSIHGYILRQKL 400
Query: 231 --------AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+++T + K G +D+++ +F ++ RD+ SWN ++ GYAQNG +A +LF++
Sbjct: 401 SLDTAAHNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNE 460
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M PD + VSL CAS L G+ + VI++G + V+ +LV MY KCG
Sbjct: 461 MRSCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFVIRNGLRPCILVDTSLVDMYCKCGD 520
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ ++ F D+VSW+ IIA + H A + + + ++P+ + FLS+LS
Sbjct: 521 LDSAQRCFNLMPSQDLVSWSAIIAGYGYHGKGETALRLYSKFLETRIKPNHVIFLSILSS 580
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
C G ID+ +N++ M D+G P EH+AC+VD++ RAG+++ A + +
Sbjct: 581 CSHNGLIDQGLNIYESMTRDFGFVPNLEHHACMVDLLCRAGKVEEAYNLYK 631
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 113/236 (47%), Gaps = 20/236 (8%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S D N + +++ G++ + VFD+M +D+V+WN+++ Y +G + +LF+
Sbjct: 401 SLDTAAHNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNE 460
Query: 94 M----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY-----NAMISGFIKFG 144
M + ++ ++V GC L + RN +++ + K G
Sbjct: 461 MRSCHQTPDSITIVSLVQGCASTGQLHPG-KWIHGFVIRNGLRPCILVDTSLVDMYCKCG 519
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF-DAMPRRNEVSWTVMI- 202
L AQR F MP ++VS++ +I GY +G R + F + + N V + ++
Sbjct: 520 DLDSAQRCFNLMPSQDLVSWSAIIAGYGYHGKGETALRLYSKFLETRIKPNHVIFLSILS 579
Query: 203 ----NGLVENGL--YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQI 252
NGL++ GL YE FG +P N+ M+ C+ GKV+EA+ L++++
Sbjct: 580 SCSHNGLIDQGLNIYESMTRDFGFVP--NLEHHACMVDLLCRAGKVEEAYNLYKRM 633
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
S+N +I ++ G + L ++ M+ + D F SL AC+ L L G + V
Sbjct: 36 SYNALINRHSTQGAHRQVLITYTSMLNANIPSDAYTFPSLLKACSFLNLFHLGNSLHQRV 95
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
I +G +D + ++L+ Y K G + F + ++V W T+I +++ +A
Sbjct: 96 IVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAF 155
Query: 379 SYFDQMIAVGVRPDGITFLSLL-------SVCCRAG-----KIDESMNLFNLMVHDYGIP 426
S F QM G++P +T LSLL V C G +NL N MV+ YG
Sbjct: 156 SLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIFYGFMSDLNLLNSMVNLYGKC 215
Query: 427 PRSEHYACLVDVMSR 441
E L + M R
Sbjct: 216 GSIEDCRKLFEFMDR 230
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 203 bits (517), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 199/389 (51%), Gaps = 9/389 (2%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
N+++ Y P +R +FD M N V+W +++ D AF F +MPE+
Sbjct: 111 NALIDMYGKCFNPNDARKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEI 170
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPCPNVV-----SYTVMIDGYVKVKEG--GGIARAR 184
++N +I+ + G + LFKEM C N+ +++ ++ + E G +
Sbjct: 171 AWNIIIAAHARCGEVEACLHLFKEM-CENLYQPDQWTFSALMSACTESMESLHGCMMHCF 229
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDE 244
+ EV+ ++ ++ + + +A ++F N V+ A+I K G +
Sbjct: 230 VIKSGWSTAMEVNNSI-VSFYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQK 288
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A FQQ ++I SW MI GY +NG G+ AL+LF M R Q DDL+ ++ ACAS
Sbjct: 289 ALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACAS 348
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
LA+L G+ ++ +I G D L V N+L+ MY+KCG I S+LA + D+VSWN++
Sbjct: 349 LAILVHGKMVHSCIIHLGLDKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSM 408
Query: 365 IAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
+ AF + +A F +M+A GVRPD +TF LL C G IDE F M +YG
Sbjct: 409 LFAFGLNGRGNEAICMFREMVASGVRPDEVTFTGLLMTCSHLGLIDEGFAFFQSMSLEYG 468
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ +H AC+VD++ R G + A + R
Sbjct: 469 LVQGMDHVACMVDMLGRGGYVAEAQSLAR 497
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 162/378 (42%), Gaps = 60/378 (15%)
Query: 39 RANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKN 98
RA I + +R+G I AR++FD+MP +D V WN+MLTAY G Q + LFD+M
Sbjct: 7 RATSEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRI- 65
Query: 99 VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
+D + F+Y AA+ N+ + + I K L +P
Sbjct: 66 -------------SDSKPDNFSYSAAI---NSCAGASDIRFGTKLHSLVVVSGYQSSLPV 109
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
N +ID Y K AR +FD M NEV+W ++ ++ A+E+F
Sbjct: 110 AN-----ALIDMYGKCFNPN---DARKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIF 161
Query: 219 GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
MP+K +A WNI+I +A+ G E L+
Sbjct: 162 RSMPEKVEIA-------------------------------WNIIIAAHARCGEVEACLH 190
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
LF +M QPD F +L +AC G + VIK G+ + + VNN++V+ Y+
Sbjct: 191 LFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYA 250
Query: 339 KCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
K D+ F + VSWN II A + KA F Q + +++ S
Sbjct: 251 KLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNI----VSWTS 306
Query: 399 LLSVCCRAGKIDESMNLF 416
++ R G D +++LF
Sbjct: 307 MIVGYTRNGNGDLALSLF 324
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 106/206 (51%), Gaps = 9/206 (4%)
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
++ +T+ I + G++ A LF ++ RD +WN M+T Y++ G ++ +LF M R
Sbjct: 5 LIRATSEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRR 64
Query: 286 -TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
+ +PD+ + + +CA + + G + ++LV+ G+ S L V NAL+ MY KC +
Sbjct: 65 ISDSKPDNFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPN 124
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG--ITFLSLLSV 402
D+ F + + + V+W +++ A+A + A F M P+ I + +++
Sbjct: 125 DARKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSM------PEKVEIAWNIIIAA 178
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPR 428
R G+++ ++LF M + P +
Sbjct: 179 HARCGEVEACLHLFKEMCENLYQPDQ 204
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDML 115
A +VF+ + V+WN+++ A+ G Q + F P KN+VSW +M+ G +N
Sbjct: 258 AVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNG 317
Query: 116 DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV--------- 166
D A + F M +RN+ + +++G + A + +M ++ +
Sbjct: 318 DLALSLFLDM-KRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNS 376
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
+I+ Y K G I ++ + ++ VSW M+ NG EA +F M V
Sbjct: 377 LINMYAKC---GDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGV 433
Query: 227 VASTAMITGF---CKQ-GKVDEAWTLFQQI 252
TG C G +DE + FQ +
Sbjct: 434 RPDEVTFTGLLMTCSHLGLIDEGFAFFQSM 463
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 215/448 (47%), Gaps = 57/448 (12%)
Query: 55 AARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDM 114
A R+ F P +SM+ G +R +FD MP ++VV WN+++ G VQ +
Sbjct: 164 AVRKGFHLHPH----VGSSMINFLVKCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGL 219
Query: 115 LDEAFNYFAAMPE---RNAASYNAMI------SGFIKFGRLCDAQRLFKEMPCPNVVSYT 165
L E F M R ++ A I SG K G L M +V T
Sbjct: 220 LKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMG-DDVFVLT 278
Query: 166 VMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ-- 223
++D Y V G A +F+ M R+ +SW MI+G V+NG+ E++ LF ++ Q
Sbjct: 279 SLVDMYCNV---GDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSG 335
Query: 224 -------------------------------------KNVVASTAMITGFCKQGKVDEAW 246
N+V STA++ + K G + +A
Sbjct: 336 DGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSKCGAIKQAS 395
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
+F+ + R++ +W M+ G +QNG E AL LF +M + + + VSL CA L
Sbjct: 396 DVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSLVHCCAHLG 455
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE-LAFGQTSQPDIVSWNTII 365
L +GR + +I+HG++ + +AL+ MY+KCG I +E L + D++ N++I
Sbjct: 456 SLKKGRSVHGHLIRHGYEFNAVNMSALIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMI 515
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+ H ++A +D+MI ++P+ TF+S+L+ C +G ++E LF+ M + I
Sbjct: 516 MGYGMHGQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRTLFHCMERVHNI 575
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEIIR 453
P +HYAC VD++SRAG L+ A +++
Sbjct: 576 KPSDKHYACFVDLLSRAGYLEEAYALVK 603
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 184/409 (44%), Gaps = 76/409 (18%)
Query: 115 LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVV--SYT------- 165
L+ A+ F P R NAM+ GF+K + +LFK M ++ SYT
Sbjct: 88 LNYAYKVFDQCPHRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDIELNSYTCVFGLKA 147
Query: 166 --VMIDGYV-------KVKEG------------------GGIARARALFDAMPRRNEVSW 198
V++D V V++G G + AR +FD MP R+ V W
Sbjct: 148 CTVLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVCW 207
Query: 199 TVMINGLVENGLYEEAWELFGRM------PQKNVVAS----------------------- 229
+I G V+ GL +E +LF M P +AS
Sbjct: 208 NSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLA 267
Query: 230 ----------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNL 279
T+++ +C G + A+ +F ++ R + SWN MI+G QNG E+ +L
Sbjct: 268 LGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSL 327
Query: 280 FSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSK 339
F ++V++G D VSL C+ + L+ G+ +A +I+ G +S+L ++ A+V MYSK
Sbjct: 328 FHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAIVDMYSK 387
Query: 340 CGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSL 399
CG+I + F + ++++W ++ +Q+ A F +M V + +T +SL
Sbjct: 388 CGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTLVSL 447
Query: 400 LSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ C G + + ++ ++ +G + + + L+D+ ++ G++ A
Sbjct: 448 VHCCAHLGSLKKGRSVHGHLIR-HGYEFNAVNMSALIDMYAKCGKIHSA 495
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 157/385 (40%), Gaps = 121/385 (31%)
Query: 49 RAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----------PMKN 98
+ GN+ AR VFD MP +DVV WNS++ Y G + LF M M +
Sbjct: 185 KCGNLNDARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMAS 244
Query: 99 VV-----SWNAMVAGCVQNDML------------------------DEAFNYFAAMPERN 129
++ S + + CV +L + AF F M R+
Sbjct: 245 ILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRS 304
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEM--------------------------------P 157
S+NAMISG ++ G + ++ LF ++
Sbjct: 305 LISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHA 364
Query: 158 C-------PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
C N+V T ++D Y K G I +A +F M +RN ++WT M+ GL +NG
Sbjct: 365 CIIRKGLESNLVLSTAIVDMYSKC---GAIKQASDVFRTMEKRNVITWTAMLVGLSQNGY 421
Query: 211 YEEAWELFGRMPQKNVVAS---------------------------------------TA 231
E A +LF RM ++NV A+ +A
Sbjct: 422 AEGALKLFCRMQEENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNAVNMSA 481
Query: 232 MITGFCKQGKVDEAWTLFQQ-IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
+I + K GK+ A LF +D+ N MI GY +G+G +AL ++ +M+ ++P
Sbjct: 482 LIDMYAKCGKIHSAEKLFYNGFHLKDVILCNSMIMGYGMHGQGHQALRVYDRMIDERLKP 541
Query: 291 DDLIFVSLFTACASLALLDQGRQTY 315
+ FVS+ TAC+ L+++GR +
Sbjct: 542 NQTTFVSMLTACSHSGLVEEGRTLF 566
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 93/192 (48%), Gaps = 2/192 (1%)
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+T +I + G ++ A+ +F Q R+ N M+ G+ +N +E LF M +
Sbjct: 75 ATKLIKIYSNLGFLNYAYKVFDQCPHRETILCNAMMGGFLKNMEYKEVPKLFKMMGLRDI 134
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
+ + V AC L + G + + ++ GF V ++++ KCG++ D+ +
Sbjct: 135 ELNSYTCVFGLKACTVLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARM 194
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG- 407
F + D+V WN+II + Q L + F +MI+ G+RP +T S+L C +G
Sbjct: 195 VFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRPSSVTMASILKACGESGH 254
Query: 408 -KIDESMNLFNL 418
K+ +++F L
Sbjct: 255 KKLGTCVHVFVL 266
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 15/221 (6%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSW 102
+S+ G I A VF M ++V+TW +ML +G+ + + LF M +NV V+
Sbjct: 385 YSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANSVTL 444
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLF-KEMP 157
++V C L + + + E NA + +A+I + K G++ A++LF
Sbjct: 445 VSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNAVNMSALIDMYAKCGKIHSAEKLFYNGFH 504
Query: 158 CPNVVSYTVMIDGYVKVKEGGGIARA-RALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
+V+ MI GY +G R + D + N+ ++ M+ +GL EE
Sbjct: 505 LKDVILCNSMIMGYGMHGQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEEGRT 564
Query: 217 LFGRMPQ-KNVVASTAMITGFC----KQGKVDEAWTLFQQI 252
LF M + N+ S F + G ++EA+ L +QI
Sbjct: 565 LFHCMERVHNIKPSDKHYACFVDLLSRAGYLEEAYALVKQI 605
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 215/430 (50%), Gaps = 52/430 (12%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
++++ Y G + ++F+ M +NVVSW A++ G V + +YF+ M R+
Sbjct: 190 SALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEM-WRSKV 248
Query: 132 SYNAMI----------SGFIKFGRLCDAQ------------------------------R 151
Y++ SG + +G+ AQ R
Sbjct: 249 GYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMR 308
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVE 207
LF +M P+VVS+T +I YV++ G RA F M + NE ++ +I+
Sbjct: 309 LFGKMSTPDVVSWTNLIMTYVQM---GDEERALDAFKRMRKSDVSPNEYTFASVISACAN 365
Query: 208 NGLYEEAWELFGRMPQKNVV----ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
+ + ++ G + +V S ++IT + K G + EA +F + +DI SW+ +
Sbjct: 366 LAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTI 425
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I+ Y Q +EA N S M R G +P++ S+ + C S+ALL+ G+Q +A + G
Sbjct: 426 ISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGL 485
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
D + V++AL++MYS+ G++ ++ F DIVSW +I +A+H +A S F+
Sbjct: 486 DHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFEN 545
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
+ +VG+ PD +TF+ +L+ C AG +D + LM ++Y I P EHY C++D++ RAG
Sbjct: 546 ISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAG 605
Query: 444 QLQRACEIIR 453
+L A ++R
Sbjct: 606 RLSEAEHMVR 615
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 202/432 (46%), Gaps = 29/432 (6%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKN-- 98
N + + G I AR +F+KM +D ++W +++ Y ++ + LF M + +
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 99 -----VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQR 151
VVS N E + F+ + + +A++ ++K G+
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVE 207
+F+ M NVVS+T +I G V G + F M R + ++ V + E
Sbjct: 208 VFENMTTRNVVSWTAVIVGLV---HAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAE 264
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMI----TGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
+GL + + ++ + ++ T + K K D LF ++ D+ SW +
Sbjct: 265 SGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNL 324
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I Y Q G E AL+ F +M ++ + P++ F S+ +ACA+LA+ G Q + ++ G
Sbjct: 325 IMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGL 384
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
LSV+N+++T+YSKCG + ++ L F ++ DI+SW+TII+ + Q +A +Y
Sbjct: 385 VDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSW 444
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH----YACLVDVM 439
M G +P+ S+LSVC ++ VH Y + +H ++ L+ +
Sbjct: 445 MSREGPKPNEFALASVLSVCGSMALLEPGKQ-----VHAYALCIGLDHETMVHSALISMY 499
Query: 440 SRAGQLQRACEI 451
SR+G LQ A +I
Sbjct: 500 SRSGNLQEASKI 511
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 80/188 (42%), Gaps = 6/188 (3%)
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
MP+ N + + K GK+ EA +F ++ RD SW +I GY EAL LF
Sbjct: 84 MPELN-----SQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILF 138
Query: 281 SQM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSK 339
S M V +G+Q D + ACA + G + +K G + + V++ALV MY K
Sbjct: 139 SNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMK 198
Query: 340 CGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSL 399
G F + ++VSW +I SYF +M V D TF
Sbjct: 199 VGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVA 258
Query: 400 LSVCCRAG 407
L +G
Sbjct: 259 LKASAESG 266
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 18/198 (9%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP----MKNV 99
I+ +SR+GN+ A ++FD + D+V+W +M+ Y G+ Q + +LF+ + M +
Sbjct: 496 ISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDY 555
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQRLFK 154
V++ ++ C ++D F Y+ M + Y +I + GRL +A+ + +
Sbjct: 556 VTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVR 615
Query: 155 EM--PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMI---NGLVENG 209
M PC +VV T++ ++ G + RA + M R + S I N +G
Sbjct: 616 NMPFPCDDVVWSTLL----RACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASG 671
Query: 210 LYEEAWELFGRMPQKNVV 227
EEA + M K V+
Sbjct: 672 RREEAAHVRKLMKSKGVI 689
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 217/435 (49%), Gaps = 53/435 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D + N+++ Y +G + + +F M + VSWNA++AGCV ++ D A M
Sbjct: 218 DQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMK 277
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEM-PCP-------NVVSYTVMIDGYVKVKEGG 178
+ + +S +K + L +++ C ++ +ID Y K +
Sbjct: 278 KSGSCPNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEM-- 335
Query: 179 GIARARALFDAMPRRNEV-SWTVMINGLVENGLYEEAWELFGRMPQKNV----------- 226
+ AR +D MP ++ + + +I+G + G E+A LF + +N+
Sbjct: 336 -MDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVL 394
Query: 227 --VASTAMITGFCKQ------------------------GK---VDEAWTLFQQIRCRDI 257
VAS I CKQ GK +DEA +F++ D+
Sbjct: 395 KSVASLQQIK-VCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDL 453
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++ MIT Y+Q+G EEAL L+ QM ++PD + SL ACA+L+ +QG+Q +
Sbjct: 454 VAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVH 513
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
IK GF SD+ +N+LV MY+KCGSI D++ AF + Q IVSW+ +I AQH +A
Sbjct: 514 AIKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEA 573
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
F+QM+ V P+ IT +S+L C AG ++E F M +GI P EH+AC++D
Sbjct: 574 LIMFNQMLKDCVSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMID 633
Query: 438 VMSRAGQLQRACEII 452
++ R+G+L A E++
Sbjct: 634 LLGRSGKLNEAVELV 648
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 5/208 (2%)
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
L Q R + SW+ +I+ Y QNG +EAL F++M G++ ++ F ++ AC+
Sbjct: 39 LDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKD 98
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
L+ G++ +A+ + GF+SD V+N LV MY+KCG DS+ FG +P +VSWN + +
Sbjct: 99 LNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSC 158
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC--RAGKIDESMNLFNLMVHDYGI 425
Q + F +M+ VRP+ + +L+ C R G I +++ LM +G+
Sbjct: 159 HVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGL-LMKLGHGL 217
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEIIR 453
S + LVD+ ++AG+++ A ++ R
Sbjct: 218 DQFSAN--ALVDMYAKAGRIEDAVDVFR 243
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 178/368 (48%), Gaps = 25/368 (6%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDK-MPTKDVVTWNSMLTAYW 79
HTH L+ F FS + R +L + +S + A + D+ + VV+W+++++ Y
Sbjct: 4 HTH-LIKFG--FSRHSSLRNHL-LTFYSNSRRFGYACNLLDQSTEPRTVVSWSALISRYV 59
Query: 80 HSGFPQHSRALFDAMPM----KNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAA 131
+GF + + F+ M N ++ ++ C L+ A E +A
Sbjct: 60 QNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKVHAMTVVSGFESDAF 119
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
N ++ + K G+ D+++LF + P VVS+ + +V + +A LF M
Sbjct: 120 VSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHV---QSDFLAETVDLFKRMV 176
Query: 192 ----RRNEVSWTVMIN---GLVENGLYEEAWELFGRMPQK-NVVASTAMITGFCKQGKVD 243
R NE S ++++N GL + G+ L ++ + ++ A++ + K G+++
Sbjct: 177 EGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANALVDMYAKAGRIE 236
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
+A +F+++ D SWN +I G + + AL L ++M ++G P+ S ACA
Sbjct: 237 DAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNVFTLSSALKACA 296
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD-IVSWN 362
++ L D GRQ ++ +K DSDL V L+ +YSKC + D+ A+ D I++ N
Sbjct: 297 AMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGN 356
Query: 363 TIIAAFAQ 370
+I+ ++Q
Sbjct: 357 ALISGYSQ 364
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 169/365 (46%), Gaps = 36/365 (9%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKD-VVTWNSMLTAYWHSGFPQHSRALF 91
S D++ A I +S+ + AR+ +D MPTKD ++ N++++ Y G + + +LF
Sbjct: 316 SDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLF 375
Query: 92 DAMPMKNV-------------VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMIS 138
+ +N+ V+ + C Q L ++ + N+++
Sbjct: 376 FELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKCGIYS-----DFYVINSLLD 430
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRN 194
+ K + +A ++F+E ++V+YT MI Y + G A L+ M + +
Sbjct: 431 TYGKCSHIDEASKIFEERTWEDLVAYTSMITAY---SQHGDAEEALKLYLQMQVADIKPD 487
Query: 195 EVSWTVMINGLVENGLYEEAWEL------FGRMPQKNVVASTAMITGFCKQGKVDEAWTL 248
+ ++N YE+ +L FG M ++ AS +++ + K G +++A
Sbjct: 488 PFVCSSLLNACANLSAYEQGKQLHVHAIKFGFM--SDIFASNSLVNMYAKCGSIEDADRA 545
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F +I R I SW+ MI G AQ+G G+EAL +F+QM++ + P+ + VS+ AC L+
Sbjct: 546 FSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSVLCACNHAGLV 605
Query: 309 DQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIA 366
++G+Q + + K G + ++ + + G + ++ EL + D W ++
Sbjct: 606 NEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEADGSVWGALLG 665
Query: 367 AFAQH 371
A H
Sbjct: 666 AARIH 670
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 110/276 (39%), Gaps = 52/276 (18%)
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMP------------------------------ 222
R VSW+ +I+ V+NG ++EA F M
Sbjct: 46 RTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKSNEFTFPTVLKACSIKKDLNMGKKV 105
Query: 223 ---------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
+ + S ++ + K G+ ++ LF I + SWN + + + Q+
Sbjct: 106 HAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVSWNALFSCHVQSDFL 165
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
E ++LF +MV ++P++ + ACA L GR + L++K G D NAL
Sbjct: 166 AETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLMKLGHGLDQFSANAL 225
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
V MY+K G I D+ F + PD VSWN IIA H A ++M G P+
Sbjct: 226 VDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCPNV 285
Query: 394 ITFLSLLSVCCRAG-------------KIDESMNLF 416
T S L C G KID +LF
Sbjct: 286 FTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLF 321
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 202 bits (514), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 140/451 (31%), Positives = 224/451 (49%), Gaps = 28/451 (6%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWN----SMLTAYWHSG 82
+F HF + I ++ + ++ +++ + T V +N +++T Y G
Sbjct: 19 IFNHHFLRSEPESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCG 78
Query: 83 FPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAM--ISGF 140
+R LFD +P N+ W A++A C + D A F+ M N N++ I
Sbjct: 79 QLSIARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSV 138
Query: 141 IK-FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK------VKEGGGIARARALFDAMPRR 193
+K G + D R++ E V+ + ID +V + G + AR +FD M +
Sbjct: 139 LKACGHVGD--RIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVK 196
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGF---CKQGKVDEAW 246
+ V+ +++G + GL EA L M NVV A+I+GF C + V E +
Sbjct: 197 DLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKCDREMVSEIF 256
Query: 247 TLFQQIRCR-DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
L + R D+ SW +++G+ QN R EEA + F +M+ G P +L ACA+
Sbjct: 257 RLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATE 316
Query: 306 ALLDQGRQT--YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNT 363
A + G++ YALVI G + DL V +ALV MY+KCG I ++ F + + + V+ N+
Sbjct: 317 ARVRFGKEIHGYALVI--GVEDDLYVRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNS 374
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGV-RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
+I +A H +A F+QM GV + D +TF + L+ C G I+ LF +M
Sbjct: 375 MIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEK 434
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
Y I PR EHYAC+VD+ RAG+L+ A II+
Sbjct: 435 YCIEPRLEHYACMVDLFGRAGKLEEAYGIIK 465
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 170/354 (48%), Gaps = 51/354 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + ++ I +S+ G + AR+VFD M KD+V N++++ Y G P + +L + M
Sbjct: 166 DAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMK 225
Query: 96 M----KNVVSWNAMVAGCVQN---DMLDEAFNYFAA-MPERNAASYNAMISGFIKFGRLC 147
+ NVV+WNA+++G Q +M+ E F E + S+ +++SGF++ R
Sbjct: 226 LMGVNPNVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNE 285
Query: 148 DAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
+A FK+M CP + + ++ AR F E+ ++
Sbjct: 286 EAFDAFKKMLLLGFCPTSATISALLPACA--------TEARVRFG-----KEIHGYALVI 332
Query: 204 GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
G VE+ LY +A++ + K G + EA TLF ++ ++ + N M
Sbjct: 333 G-VEDDLY----------------VRSALVDMYAKCGFISEARTLFYKMPEKNTVTMNSM 375
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGM-QPDDLIFVSLFTACASLALLDQGRQTYALVI-KH 321
I GYA +G EEA+ LF+QM G+ + D L F + TAC+ + ++ G++ + ++ K+
Sbjct: 376 IFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKY 435
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAAFAQH 371
+ L +V ++ + G + E A+G +PD+ W ++AA H
Sbjct: 436 CIEPRLEHYACMVDLFGRAGKL---EEAYGIIKSMPVKPDLFVWGALLAACRNH 486
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 212/456 (46%), Gaps = 75/456 (16%)
Query: 70 TWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER- 128
T N+++T Y G ++ LFD K++VSWN +++ QND +EA Y M +
Sbjct: 223 TNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSG 282
Query: 129 ---NAASYNAMISG-----FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGI 180
N + +++ + G+ A L N ++D Y K+
Sbjct: 283 VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQP--- 339
Query: 181 ARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP------------------ 222
+ R +FD M RR W MI G V N EA ELF M
Sbjct: 340 EKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPA 399
Query: 223 ----------------------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
+K+ A++ + + G+++ A ++F + +DI SW
Sbjct: 400 CVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSW 459
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTG------------------MQPDDLIFVSLFTAC 302
N MITGY GR ++ALNL M R ++P+ + +++ C
Sbjct: 460 NTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGC 519
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
A+LA L +G++ +A +K D++V +ALV MY+KCG + S F Q S ++++WN
Sbjct: 520 AALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWN 579
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVG-----VRPDGITFLSLLSVCCRAGKIDESMNLFN 417
+I A+ H +A F +M+ G +RP+ +T++++ + +G +DE +NLF
Sbjct: 580 VLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFY 639
Query: 418 LMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
M +GI P S+HYACLVD++ R+GQ++ A +I+
Sbjct: 640 TMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIK 675
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 145/318 (45%), Gaps = 48/318 (15%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----------- 226
G I AR +FD + R++VSW MIN +E A LF M +NV
Sbjct: 134 GDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVA 193
Query: 227 ----------------------------VASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
+ A++T + K G+V EA TLF +D+
Sbjct: 194 HACSNLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLV 253
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SWN +I+ +QN R EEAL M+++G++P+ + S+ AC+ L +L G++ +A V
Sbjct: 254 SWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFV 313
Query: 319 IKHGFDSDLSVNN----ALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ ++DL N+ ALV MY C L F + I WN +IA + ++
Sbjct: 314 L---MNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFD 370
Query: 375 YKARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
Y+A F +M+ +G+ P+ +T S+L C R + + + +V +G
Sbjct: 371 YEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVV-KWGFEKDKYVQN 429
Query: 434 CLVDVMSRAGQLQRACEI 451
L+D+ SR G+++ A I
Sbjct: 430 ALMDMYSRMGRIEIARSI 447
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 178/393 (45%), Gaps = 39/393 (9%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV------- 99
+ + G+I AAR+VFD++ +D V+WNSM+ A + + LF M ++NV
Sbjct: 130 YGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTL 189
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFGRLCDAQRLFKE 155
VS + + +L + + F RN + NA+++ + K GR+ +A+ LF
Sbjct: 190 VSVAHACSNLINGLLLGKQVHAFVL---RNGDWRTFTNNALVTMYAKLGRVYEAKTLFDV 246
Query: 156 MPCPNVVSYTVMIDGYVKVKE-GGGIARARALFDAMPRRNEVSWTVMING-----LVENG 209
++VS+ +I + + + + R N V+ ++ ++ G
Sbjct: 247 FDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCG 306
Query: 210 LYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQ 269
A+ L +N A++ +C + ++ +F + R IA WN MI GY +
Sbjct: 307 KEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVR 366
Query: 270 NGRGEEALNLFSQMV-RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
N EA+ LF +MV G+ P+ + S+ AC ++ V+K GF+ D
Sbjct: 367 NEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKY 426
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF--------AQHVLYYKARSY 380
V NAL+ MYS+ G I + FG ++ DIVSWNT+I + A ++L+ R
Sbjct: 427 VQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 486
Query: 381 FDQMIAV----------GVRPDGITFLSLLSVC 403
+ I ++P+ +T +++L C
Sbjct: 487 AEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGC 519
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 6/188 (3%)
Query: 218 FGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
FG+ V S + G C G +D A +F +I RD SWN MI + E A+
Sbjct: 114 FGQALPTAVPNSFVNMYGKC--GDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAV 171
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASL--ALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
+LF M+ + P VS+ AC++L LL G+Q +A V+++G D NNALVT
Sbjct: 172 HLFRLMLLENVGPTSFTLVSVAHACSNLINGLL-LGKQVHAFVLRNG-DWRTFTNNALVT 229
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
MY+K G + +++ F D+VSWNTII++ +Q+ + +A Y M+ GVRP+G+T
Sbjct: 230 MYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVT 289
Query: 396 FLSLLSVC 403
S+L C
Sbjct: 290 LASVLPAC 297
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 166/356 (46%), Gaps = 40/356 (11%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-----NVVSWNAMVAGCV 110
R VFD M + + WN+M+ Y + F + LF M + N V+ ++++ CV
Sbjct: 342 GRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACV 401
Query: 111 Q-NDMLDEAFNYFAAMP---ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
+ LD+ + + E++ NA++ + + GR+ A+ +F M ++VS+
Sbjct: 402 RCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNT 461
Query: 167 MIDGYV-------------KVKEGGGIARARALFDAMPRRN------EVSWTVMINGLVE 207
MI GYV ++ G R D +N V+ ++ G
Sbjct: 462 MITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAA 521
Query: 208 NGLYEEAWELFG----RMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
+ E+ +M K+V +A++ + K G ++ + T+F+Q+ R++ +WN++
Sbjct: 522 LAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVL 581
Query: 264 ITGYAQNGRGEEALNLFSQMVRTG-----MQPDDLIFVSLFTACASLALLDQGRQT-YAL 317
I Y +G+GEEAL LF +MV G ++P+++ ++++F + + ++D+G Y +
Sbjct: 582 IMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTM 641
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSE--LAFGQTSQPDIVSWNTIIAAFAQH 371
KHG + LV + + G I ++ + ++ + +W++++ A H
Sbjct: 642 KAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIH 697
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 122/286 (42%), Gaps = 34/286 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D Y N + +SR G I AR +F M KD+V+WN+M+T Y G +H AL
Sbjct: 424 DKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCG--RHDDALNLLHD 481
Query: 96 MKNVVSWNAMVAGCVQNDMLD-EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF- 153
M+ + + + N D E F P N+ + ++ G L + +
Sbjct: 482 MQRGQAEHRI------NTFDDYEDNKNFPLKP--NSVTLMTVLPGCAALAALGKGKEIHA 533
Query: 154 ---KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
K+M +V + ++D Y K G + +R +F+ M RN ++W V+I +G
Sbjct: 534 YAVKQMLSKDVAVGSALVDMYAKC---GCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGK 590
Query: 211 YEEAWELFGRMPQK---------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRD----- 256
EEA +LF RM ++ N V A+ G VDE LF ++ +
Sbjct: 591 GEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPT 650
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ ++ ++G+ EEA NL M + D + SL AC
Sbjct: 651 SDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVD--AWSSLLGAC 694
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%)
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
+A++ ++ MV G+ PD+ F ++ A A + L+ G+Q +A V K G +V N+
Sbjct: 67 HQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSF 126
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
V MY KCG I + F + + D VSWN++I A + + A F M+ V P
Sbjct: 127 VNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTS 186
Query: 394 ITFLSLLSVC 403
T +S+ C
Sbjct: 187 FTLVSVAHAC 196
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 106/217 (48%), Gaps = 24/217 (11%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
K S DV + + +++ G + +R VF++M ++V+TWN ++ AY G + +
Sbjct: 537 KQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALK 596
Query: 90 LFDAMPMK---------NVVSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNA 135
LF M + N V++ A+ A + M+DE N F M E + Y
Sbjct: 597 LFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYAC 656
Query: 136 MISGFIKFGRLCDAQRLFKEMPC--PNVVSYTVMIDGYVKVK---EGGGIARARALFDAM 190
++ + G++ +A L K MP V +++ ++ G K+ E G IA A+ LF
Sbjct: 657 LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLL-GACKIHQNLEIGEIA-AKNLFVLD 714
Query: 191 PRRNEVSWTVMINGLVEN-GLYEEAWELFGRMPQKNV 226
P N S+ V+++ + + GL+++A ++ +M +K V
Sbjct: 715 P--NVASYYVLLSNIYSSAGLWDQAIDVRKKMKEKGV 749
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 134/432 (31%), Positives = 204/432 (47%), Gaps = 54/432 (12%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
NS+L Y + G + +R +F+ M + VVSWN ++ G +N+ ++A ++ M +
Sbjct: 153 NSLLAMYMNVGEKEAARLVFELMQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVG 212
Query: 132 SYNAMISGF---------IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR 182
A + ++ GR A L K NVV ++D YVK G +
Sbjct: 213 VDCATVVSVLQACGVLKNVELGREVRALTLEKGY-WGNVVVRNALLDMYVKC---GEMEE 268
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV---VASTAMITGFC-- 237
AR L + M ++ V+WT +ING V NG A L M + V + S A + C
Sbjct: 269 ARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGD 328
Query: 238 ----KQGKVDEAWTLFQQI---------------RCRD---------------IASWNIM 263
K GK AW + Q I +C + A WN +
Sbjct: 329 LVSLKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAV 388
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
++G+ N A+ LF +M+ +QPD F SL A A LA L Q + ++K GF
Sbjct: 389 LSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMNMHCYLVKLGF 448
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQT--SQPDIVSWNTIIAAFAQHVLYYKARSYF 381
L V + LV +YSKCG++ + F DI+ W II A+ +H A S F
Sbjct: 449 LCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYGEMAVSLF 508
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
+QM+ G +P+ +TF S+L C AG +D+ ++LFNLM+ Y + P +HY C+VD++ R
Sbjct: 509 NQMVQSGEKPNEVTFTSVLHACSHAGLVDQGLSLFNLMLKKYQVIPSVDHYTCIVDLLGR 568
Query: 442 AGQLQRACEIIR 453
AG+L A +IR
Sbjct: 569 AGRLNDAYNLIR 580
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 46/264 (17%)
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------GR-MPQK----------- 224
A LFD +P+RN SW M+ V+ G +A +F GR MP
Sbjct: 66 ASQLFDKLPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACS 125
Query: 225 ----------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
N +++ + G+ + A +F+ ++ R + SWN
Sbjct: 126 ELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSWNT 185
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I G +N E+AL ++S+MV G+ D VS+ AC L ++ GR+ AL ++ G
Sbjct: 186 LINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLEKG 245
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF- 381
+ ++ V NAL+ MY KCG + ++ L + D+V+W T+I + V+ ARS
Sbjct: 246 YWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGY---VVNGDARSALM 302
Query: 382 --DQMIAVGVRPDGITFLSLLSVC 403
M GV+P+ ++ SLLS C
Sbjct: 303 LCRSMQLEGVKPNLVSVASLLSAC 326
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG- 287
S+ + T + + A LF ++ R++ SWN M+ Y Q GR +ALN+F +M+ +G
Sbjct: 50 SSKLATTYAQCHHASYASQLFDKLPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGR 109
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
PD + + AC+ L +D G + K GFD + V N+L+ MY G +
Sbjct: 110 AMPDHFTYPIVIKACSELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAAR 169
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
L F + +VSWNT+I ++ A + +M+ GV D T +S+L C
Sbjct: 170 LVFELMQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQAC 225
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPT--KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK 97
A++ + +S+ G + A Q+FD +P KD++ W +++ AY G+ + + +LF+ M
Sbjct: 455 ASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQS 514
Query: 98 ----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCD 148
N V++ +++ C ++D+ + F M ++ + Y ++ + GRL D
Sbjct: 515 GEKPNEVTFTSVLHACSHAGLVDQGLSLFNLMLKKYQVIPSVDHYTCIVDLLGRAGRLND 574
Query: 149 AQRLFKEMP 157
A L + MP
Sbjct: 575 AYNLIRTMP 583
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 216/437 (49%), Gaps = 50/437 (11%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D S++ Y + +R +FD MP ++VVSWN++++ M+++A + M
Sbjct: 44 DTFVQTSLVDMYSKCSVIESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEML 103
Query: 127 ----ERNAASYNAMISGFIK----FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK--VKE 176
+ +++++ +++SG+ F L + + +V + V +D + +
Sbjct: 104 VLGFKPSSSTFVSILSGYSSNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQ 163
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV---------- 226
G + AR +FD M + VSWT ++ G V+ G EA +LF M +N+
Sbjct: 164 FGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNL 223
Query: 227 -----------VASTA------------------MITGFCKQGKVDEAWTLFQQIRCRDI 257
+AS+ ++T + + G + A +F I + +
Sbjct: 224 VSGCIQLREQLLASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSV 283
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SW MI GYA + R +EAL+LF +MV T ++P+ ++ +ACA L L G +
Sbjct: 284 LSWTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNRATLATVLSACADLGSLCIGEEIEQY 343
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
++GF++DL V +LV MYSKCG+I + F + D+ W+++I ++ H + +A
Sbjct: 344 AFENGFETDLQVQTSLVHMYSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMGNEA 403
Query: 378 RSYFDQM-IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
S F++M A ++PD I + SLL C +G I++ + F M D+GI P EHY CLV
Sbjct: 404 ISLFEKMTTAERIKPDAIVYTSLLFACSHSGLIEDGLKYFKSMQTDFGITPTKEHYTCLV 463
Query: 437 DVMSRAGQLQRACEIIR 453
D+++R GQL A + I
Sbjct: 464 DLLARVGQLDLALDTIE 480
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 173/425 (40%), Gaps = 124/425 (29%)
Query: 11 LKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVT 70
L P T H H VF F + D + + +S+ I +AR+VFD+MP + VV+
Sbjct: 23 LLSIPHGTMLHGH---VFRLGFQA-DTFVQTSLVDMYSKCSVIESARKVFDEMPERSVVS 78
Query: 71 WNSMLTAYWHSGFPQHSRALFDAMPM------------------KNVVS----WNAMVAG 108
WNS+++AY H + + +L M + N+ S W M
Sbjct: 79 WNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSSNLNSFEFLWQGMSMH 138
Query: 109 C----------------------VQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRL 146
C Q +DEA F M E+ S+ ++ G++K G
Sbjct: 139 CFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSS 198
Query: 147 CDAQRLFKEMPCPNV----VSYTVMIDGYVKVKEG------------------------- 177
+A +LF EM N+ + + ++ G ++++E
Sbjct: 199 VEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSLVLKCGCHEEDSIKNLL 258
Query: 178 -------GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------PQK 224
G + AR +FD + R++ +SWT MI G + +EA +LF RM P +
Sbjct: 259 LTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNR 318
Query: 225 NVVAS---------------------------------TAMITGFCKQGKVDEAWTLFQQ 251
+A+ T+++ + K G +++A +F++
Sbjct: 319 ATLATVLSACADLGSLCIGEEIEQYAFENGFETDLQVQTSLVHMYSKCGNINKAREVFER 378
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQ 310
+ +D+ W+ MI Y +G G EA++LF +M ++PD +++ SL AC+ L++
Sbjct: 379 VENKDLTLWSSMINSYGIHGMGNEAISLFEKMTTAERIKPDAIVYTSLLFACSHSGLIED 438
Query: 311 GRQTY 315
G + +
Sbjct: 439 GLKYF 443
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 5/186 (2%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
Q + T+++ + K ++ A +F ++ R + SWN +I+ Y E+AL+L +
Sbjct: 42 QADTFVQTSLVDMYSKCSVIESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKE 101
Query: 283 MVRTGMQPDDLIFVSLFTACA----SLALLDQGRQTYALVIKHGFDS-DLSVNNALVTMY 337
M+ G +P FVS+ + + S L QG + VIK G ++S++N+L+ MY
Sbjct: 102 MLVLGFKPSSSTFVSILSGYSSNLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMY 161
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
++ G + ++ F + IVSW TI+ + + +A F++M + D I F+
Sbjct: 162 AQFGQMDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFV 221
Query: 398 SLLSVC 403
+L+S C
Sbjct: 222 NLVSGC 227
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%)
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M + + + + LF +CA+L + G + V + GF +D V +LV MYSKC
Sbjct: 1 MHHSSVHGNTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSV 60
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
I + F + + +VSWN++I+A+ + KA S +M+ +G +P TF+S+LS
Sbjct: 61 IESARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILS 119
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 39/222 (17%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
NL + ++R GN+T+AR +FD + K V++W SM+ Y HS P+ + LF M M +
Sbjct: 256 NLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEALDLFRRMVMTEI- 314
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL----FKEM 156
+ N A+ ++S G LC + + F+
Sbjct: 315 --------------------------KPNRATLATVLSACADLGSLCIGEEIEQYAFENG 348
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
++ T ++ Y K G I +AR +F+ + ++ W+ MIN +G+ EA
Sbjct: 349 FETDLQVQTSLVHMYSKC---GNINKAREVFERVENKDLTLWSSMINSYGIHGMGNEAIS 405
Query: 217 LFGRMP-----QKNVVASTAMITGFCKQGKVDEAWTLFQQIR 253
LF +M + + + T+++ G +++ F+ ++
Sbjct: 406 LFEKMTTAERIKPDAIVYTSLLFACSHSGLIEDGLKYFKSMQ 447
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 206/381 (54%), Gaps = 44/381 (11%)
Query: 82 GFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMI 137
G +S LF+ ++V +W +++ Q+ + D+A +Y+A M + NA ++++++
Sbjct: 70 GHLNYSVTLFNRTRNRDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTFSSLL 129
Query: 138 SGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS 197
+G + K + C +V+ + + D YV
Sbjct: 130 NG--------STIQPIKSIHC-HVIKFGLCSDTYVA------------------------ 156
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC-RD 256
T +++G G + A +LF +MP+K++++ T M+ + K GK+ EA LF + RD
Sbjct: 157 -TGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGMEGNRD 215
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ WN+MI GYAQNG E L LF +M+ ++P+ + + + ++C + L+ GR ++
Sbjct: 216 VVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGRWVHS 275
Query: 317 LVIKHGFDSDLSVN----NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
IK+G D + V ALV MY KCGS+ D+ F + D+V+WN++I +A +
Sbjct: 276 -YIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDVVAWNSMIMGYAVNG 334
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY 432
L +A F +M GVRP +TF++LL+ C +G + + +FNLM ++Y + PR EH+
Sbjct: 335 LSEEALKLFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNLMKNEYKMEPRVEHF 394
Query: 433 ACLVDVMSRAGQLQRACEIIR 453
C+V+++ RAG+LQ A +++R
Sbjct: 395 GCMVNLLGRAGRLQEAYDLVR 415
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 202/449 (44%), Gaps = 58/449 (12%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSW 102
+S G++ + +F++ +DV TW S++ A+ S + + + M N ++
Sbjct: 66 YSSLGHLNYSVTLFNRTRNRDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTF 125
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVV 162
++++ G + + + ++ G+ + G A++LF +MP +++
Sbjct: 126 SSLLNGSTIQPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLI 185
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMP-RRNEVSWTVMINGLVENGLYEEAWELFGRM 221
S+T M+ Y K G + AR LFD M R+ V W VMI+G +NG E LF RM
Sbjct: 186 SFTTMLMCYAK---HGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRM 242
Query: 222 ----PQKNVVA--------------------------------------STAMITGFCKQ 239
+ NV+ TA++ +CK
Sbjct: 243 LVEKVKPNVITLLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKC 302
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
G +++A +F +I +D+ +WN MI GYA NG EEAL LF +M G++P + F++L
Sbjct: 303 GSLEDARKVFDKIDGKDVVAWNSMIMGYAVNGLSEEALKLFHEMHGEGVRPSYVTFIALL 362
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNN--ALVTMYSKCGSIVDS-ELAFGQTSQP 356
TAC L+ +G + + L +K+ + + V + +V + + G + ++ +L P
Sbjct: 363 TACGHSGLVTKGWEMFNL-MKNEYKMEPRVEHFGCMVNLLGRAGRLQEAYDLVRSMKIDP 421
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
D V W T++ A H + +++ + G T++ L ++ AG D + +
Sbjct: 422 DPVIWGTLLWACRLHNNISLGEEIAEFLLSNDLASSG-TYVLLSNIYAAAGNWDGAAKVR 480
Query: 417 NLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
+LM D G+ E +++V +R +
Sbjct: 481 SLM-KDSGV--EKEPGCSIIEVNNRVHEF 506
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 27/288 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D Y A + ++R G+ +A ++FDKMP K ++++ +ML Y G +R LFD M
Sbjct: 152 DTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLLEARLLFDGME 211
Query: 96 -MKNVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGRLCDAQ 150
++VV WN M+ G QN +E F M + N + ++S + G L +
Sbjct: 212 GNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEKVKPNVITLLPVLSSCGQVGALESGR 271
Query: 151 RLFKEMP-------CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
+ + V T ++D Y K G + AR +FD + ++ V+W MI
Sbjct: 272 WVHSYIKNGKDGVVGVEVRVGTALVDMYCKC---GSLEDARKVFDKIDGKDVVAWNSMIM 328
Query: 204 GLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR---- 255
G NGL EEA +LF M + V V A++T G V + W +F ++
Sbjct: 329 GYAVNGLSEEALKLFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNLMKNEYKME 388
Query: 256 -DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ + M+ + GR +EA +L M + PD +I+ +L AC
Sbjct: 389 PRVEHFGCMVNLLGRAGRLQEAYDLVRSM---KIDPDPVIWGTLLWAC 433
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Query: 299 FTACASLALLDQGR------QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
FT L+D+ + Q +A +++ D +N L YS G + S F +
Sbjct: 22 FTVETLAVLIDKSKSKTHLLQIHASLVRRNLDDHTILNFKLQRRYSSLGHLNYSVTLFNR 81
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
T D+ +W +II A Q L +A SY+ QM+ ++P+ TF SLL+ G +
Sbjct: 82 TRNRDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTFSSLLN-----GSTIQP 136
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ + V +G+ + LVD +R G A
Sbjct: 137 IKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISA 172
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 190/361 (52%), Gaps = 15/361 (4%)
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC---- 158
NA + + L A++ F R+ ++N+MI+G +K G +A +++KEM
Sbjct: 197 NASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVR 256
Query: 159 PNVVSYTVMIDGYVKV------KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
PN ++ MI +V KE + L +P N +++ V+ G
Sbjct: 257 PNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTN-----ALMDMYVKCGELL 311
Query: 213 EAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGR 272
A LF M QK +V+ T M+ G+ + G +D A + +I + + WN +I+G Q +
Sbjct: 312 TARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQ 371
Query: 273 GEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
G+EAL LF +M ++PD + V+ +AC+ L LD G + + +H D+++ A
Sbjct: 372 GKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTA 431
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
LV MY+KCG+I + F + Q + ++W +I A H A SYF +MI +G+ PD
Sbjct: 432 LVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPD 491
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
ITFL +LS CC G ++E F+ M + + P+ +HY+C+VD++ RAG L+ A E++
Sbjct: 492 EITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELV 551
Query: 453 R 453
+
Sbjct: 552 K 552
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 163/360 (45%), Gaps = 51/360 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ N +I G ++ A VF+K +D+VTWNSM+T G + ++ M
Sbjct: 192 DIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEME 251
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLC 147
+ V ++ M++ C Q L+ + + E NA++ ++K G L
Sbjct: 252 AEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELL 311
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
A+ LF M +VS+T M+ GY + G + AR + +P ++ V W +I+G V+
Sbjct: 312 TARVLFDNMAQKTLVSWTTMVLGYARF---GFLDVAREILYKIPEKSVVPWNAIISGCVQ 368
Query: 208 NGLYEEAWELFGRM------PQK---------------------------------NVVA 228
+EA LF M P K +V
Sbjct: 369 AKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVAL 428
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
TA++ + K G + A +F++I R+ +W +I G A +G ++AL+ FS+M+ G+
Sbjct: 429 GTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGI 488
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
PD++ F+ + +AC L+++GR+ ++ + K L + +V + + G + ++E
Sbjct: 489 VPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAE 548
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 185/429 (43%), Gaps = 62/429 (14%)
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
P + WN+ HS F + + L K++V + A V +++ F
Sbjct: 41 PITKTINWNTT-----HS-FVRENPLLSILERCKSLVQLKQIQAQMVSTGLIENGF---- 90
Query: 124 AMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK--EGGGIA 181
AAS + L R+ + NV S+ I GYV+ EGG +
Sbjct: 91 ------AASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFML 144
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL--------FGRMPQKNVVASTAMI 233
R L + + ++ +++ G G Y L FG + ++ A I
Sbjct: 145 YKRMLLGGTLKPDNHTYPLLLKGCC--GQYSSCLGLGVLGHVLKFGF--ECDIFVHNASI 200
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
T G++ A+ +F + R RD+ +WN MITG + G EA+ ++ +M ++P+++
Sbjct: 201 TMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEI 260
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
+ + ++C+ + L+ G++ + + +HG + + + NAL+ MY KCG ++ + + F
Sbjct: 261 TMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNM 320
Query: 354 SQPDIVSWNTIIAAF--------AQHVLY-----------------------YKARSYFD 382
+Q +VSW T++ + A+ +LY +A + F
Sbjct: 321 AQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFH 380
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M + PD +T ++ LS C + G +D + + + + + + LVD+ ++
Sbjct: 381 EMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHH-YIERHKLSIDVALGTALVDMYAKC 439
Query: 443 GQLQRACEI 451
G + RA ++
Sbjct: 440 GNIARALQV 448
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 149/335 (44%), Gaps = 26/335 (7%)
Query: 23 HFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG 82
F +H + + N + + + G + AR +FD M K +V+W +M+ Y G
Sbjct: 280 EFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFG 339
Query: 83 FPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMIS 138
F +R + +P K+VV WNA+++GCVQ EA F M E + + +S
Sbjct: 340 FLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLS 399
Query: 139 GFIKFGRLCDA----QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN 194
+ G L + + +V T ++D Y K G IARA +F+ +P+RN
Sbjct: 400 ACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKC---GNIARALQVFEEIPQRN 456
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST----AMITGFCKQGKVDEAWTLFQ 250
++WT +I GL +G ++A F +M +V +++ C G V+E F
Sbjct: 457 CLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFS 516
Query: 251 QIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
++ + + ++ M+ + G EEA L M M D + +LF AC
Sbjct: 517 EMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNM---PMAADAAVLGALFFACRVY 573
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALV-TMYSK 339
+ G +T +++ D S N L+ +MYS+
Sbjct: 574 GNVQIGERTAFKLLE--IDPQDSGNYVLLASMYSE 606
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 205/383 (53%), Gaps = 25/383 (6%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
+++ AY G + + LFDA+P ++ V+W +++ C +++ +AF+ +
Sbjct: 47 KTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQ 106
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
+ + S IK C N+ G V VK G + AR L
Sbjct: 107 PDHFVFSSLIK--------------ACANL--------GSVHVKLGKQL-HARFLLSPF- 142
Query: 192 RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQ 251
++V + +++ + L + +F + + + ++ TAMI+G+ + G+ EA LF++
Sbjct: 143 FEDDVVKSSLVDMYAKFELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRE 202
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ-PDDLIFVSLFTACASLALLDQ 310
+++ +W +I+G Q+G +AL LF +M R G+ D L+ S+ ACA+ A+ +
Sbjct: 203 SPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVREL 262
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
G+Q + +VI G++S L ++NALV MY+KC +V ++ F + + D+VSW +II AQ
Sbjct: 263 GKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQ 322
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSE 430
H L +A + +D M+ GV+P+ +TF+ L+ C G + + LF MV D+GI P +
Sbjct: 323 HGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQ 382
Query: 431 HYACLVDVMSRAGQLQRACEIIR 453
HY CL+D+ SR+G L A +IR
Sbjct: 383 HYTCLLDLFSRSGHLDEAENLIR 405
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 139/323 (43%), Gaps = 59/323 (18%)
Query: 31 HFSSYDVYRANLNIAAFS-RAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
HF + +A N+ + + G AR + DVV +S++ Y P + RA
Sbjct: 109 HFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVK-SSLVDMYAKFELPDYGRA 167
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
+FD++ + +SW AM++G ++ EA F P +N ++ A+ISG ++ G DA
Sbjct: 168 VFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDA 227
Query: 150 QRLFKEM-------PCPNVVSYTV---------------------------------MID 169
LF EM P V+S V ++D
Sbjct: 228 LYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVD 287
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM----PQKN 225
Y K + + A+ +F M R++ VSWT +I G ++GL EEA L+ M + N
Sbjct: 288 MYAKCSD---VVAAKYIFCEMRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMVLAGVKPN 344
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQ------IRCRDIASWNIMITGYAQNGRGEEALNL 279
V +I G V + LF+ IR + + ++ ++++G +EA NL
Sbjct: 345 EVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIR-PSLQHYTCLLDLFSRSGHLDEAENL 403
Query: 280 FSQMVRTGMQPDDLIFVSLFTAC 302
M ++PD+ + +L +AC
Sbjct: 404 IRTM---PVKPDEPTWAALLSAC 423
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 123/270 (45%), Gaps = 28/270 (10%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
I+ ++R+G A ++F + P K++ W ++++ SG + LF M + V
Sbjct: 184 ISGYARSGRKLEALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIAD 243
Query: 100 -VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIKFGRLCDAQRLFK 154
+ +++V C + + + + S NA++ + K + A+ +F
Sbjct: 244 PLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFC 303
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRRNEVSWTVMIN-----GL 205
EM +VVS+T +I G + G A L+D M + NEV++ +I GL
Sbjct: 304 EMRRKDVVSWTSIIVG---TAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGL 360
Query: 206 VENG--LYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-DIASWNI 262
V G L++ E FG P ++ T ++ F + G +DEA L + + + D +W
Sbjct: 361 VSKGRALFKSMVEDFGIRP--SLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAA 418
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
+++ +G + A+ + ++ ++P+D
Sbjct: 419 LLSACKHHGNTKMAVRIADHLL--DLKPED 446
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
++ +A +IK G + L+ Y KCG + D+ F Q D V+W T+++A
Sbjct: 27 AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNL 86
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
L +KA S ++ G++PD F SL+ C G +
Sbjct: 87 SNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSV 125
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 205/405 (50%), Gaps = 44/405 (10%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
+DV N+++ Y G + + +F+ M K+VV+WNAMV G QN ++A + F M
Sbjct: 148 EDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKM 207
Query: 126 PER----NAASYNAMISGFIKFGRLCDAQRLFKEM-PC---PNVVSYTVMIDGYVKVKEG 177
E + +++++ISG+ + G C+A +F++M C PNVV+ ++ V
Sbjct: 208 REEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASV--- 264
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM--PQKNVVASTAMITG 235
G + + E Y + L G ++ A+I
Sbjct: 265 GALLHGK----------------------ETHCYSVKFILKGEHNDDTDDLAVINALIDM 302
Query: 236 FCKQGKVDEAWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG--MQPD 291
+ K ++ A +F +I + RD+ +W +MI GYAQ+G AL LFS+M + + P+
Sbjct: 303 YAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPN 362
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHG--FDSDLSVNNALVTMYSKCGSIVDSELA 349
D + +CA L+ L+ G+Q +A V++ + L V N L+ MYSK G + +++
Sbjct: 363 DFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVV 422
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
F S+ + VSW +++ + H A FD+M + PDGITFL +L C +G +
Sbjct: 423 FDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMV 482
Query: 410 DESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
D +NLF M D+G+ P EHYAC+VD++ RAG+L CE RL
Sbjct: 483 DRGINLFYRMSKDFGVDPGVEHYACMVDLLGRAGRL---CEATRL 524
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 177/406 (43%), Gaps = 77/406 (18%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ N + +++ G + A +VF++M KDVVTWN+M+T Y +G + + +LF M
Sbjct: 149 DVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMR 208
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGRLC 147
+ +VV+W+++++G Q EA + F M N + +++S G L
Sbjct: 209 EEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALL 268
Query: 148 DAQRLFKEMPCPNV---------------VSYTVMIDGYVKVKEGGGIARARALFDAM-P 191
KE C +V +ID Y K K + ARA+FD + P
Sbjct: 269 HG----KETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKS---LEVARAMFDEICP 321
Query: 192 R-RNEVSWTVMINGLVENGLYEEAWELFGRM----------------------------- 221
+ R+ V+WTVMI G ++G A +LF M
Sbjct: 322 KDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNF 381
Query: 222 --------PQKNVVASTAMITGFC------KQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
+++++ S + C K G VD A +F + R+ SW ++TGY
Sbjct: 382 GKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGY 441
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT-YALVIKHGFDSD 326
+GR E+A +F +M + + PD + F+ + AC+ ++D+G Y + G D
Sbjct: 442 GMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMVDRGINLFYRMSKDFGVDPG 501
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQH 371
+ +V + + G + ++ S +P V W ++++A H
Sbjct: 502 VEHYACMVDLLGRAGRLCEATRLINDMSMEPTPVVWISLLSACRTH 547
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 105/201 (52%), Gaps = 4/201 (1%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR---DIASWNIMITGYAQNGRGEEALNL 279
+ NV A+I+ + K V A +F ++ R D +WN +++ Y+ A++L
Sbjct: 42 ESNVFVCNAVISMYGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSL 101
Query: 280 FSQM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
F +M V G+ PD + V++ C L L GRQ + ++ G D+ V NALV MY+
Sbjct: 102 FREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYA 161
Query: 339 KCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
KCG + D+ F + D+V+WN ++ ++Q+ + A S F +M + D +T+ S
Sbjct: 162 KCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSS 221
Query: 399 LLSVCCRAGKIDESMNLFNLM 419
++S + G E+M++F M
Sbjct: 222 VISGYAQRGFGCEAMDVFRQM 242
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 40/315 (12%)
Query: 1 MLSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVF 60
+LS+ AL + F+L + + D+ N I +++ ++ AR +F
Sbjct: 257 LLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMF 316
Query: 61 DKMPTK--DVVTWNSMLTAYWHSGFPQHSRALFDAM-PMKNVVSWNAMVAGCVQNDMLDE 117
D++ K DVVTW M+ Y G H+ LF M + N + N CV
Sbjct: 317 DEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCV------- 369
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
+ +A ++ I ++ L + LF +ID Y K
Sbjct: 370 ----LMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVA---------NCLIDMYSK---S 413
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS----TAMI 233
G + A+ +FD+M +RN VSWT ++ G +G E+A+ +F M ++ +V ++
Sbjct: 414 GDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVL 473
Query: 234 TGFCKQGKVDEAWTLFQQIRCRD------IASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
G VD LF ++ +D + + M+ + GR EA L + M
Sbjct: 474 YACSHSGMVDRGINLFYRMS-KDFGVDPGVEHYACMVDLLGRAGRLCEATRLINDM---S 529
Query: 288 MQPDDLIFVSLFTAC 302
M+P ++++SL +AC
Sbjct: 530 MEPTPVVWISLLSAC 544
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 13/167 (7%)
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
PD F +F AC ++ + G + VI+ GF+S++ V NA+++MY KC ++V +
Sbjct: 8 PDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKV 67
Query: 350 FGQTSQP---DIVSWNTIIAAFAQHVLYYKARSYFDQM-IAVGVRPDGITFLSLLSVCCR 405
F + D V+WN+I++ ++ + A S F +M + G+ PD + +++L VC
Sbjct: 68 FDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGY 127
Query: 406 AGKIDESMNLFNLMVHDY----GIPPRSEHYACLVDVMSRAGQLQRA 448
G + L VH + G+ LVD+ ++ G+++ A
Sbjct: 128 LG-----LGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDA 169
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 201/417 (48%), Gaps = 61/417 (14%)
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE--RNAASYN--------AMISG 139
+F MP +++V WN +VAG QN +A M E + A S A + G
Sbjct: 192 MFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKG 251
Query: 140 FIKFGRLCD--AQRL-FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
++ GR A RL F M V T ++D Y K G + R +F M +N V
Sbjct: 252 -LRIGRSVHGYAVRLGFDSM----VNVSTALLDMYFKC---GEVETGRLVFQRMSSKNVV 303
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQK-------------------------------- 224
SW +I+GL +NG EEA+ F +M ++
Sbjct: 304 SWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLL 363
Query: 225 -------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
NV ++I+ + K +VD A ++F + + +WN MI GYAQNG EAL
Sbjct: 364 DQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEAL 423
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
NLF M G++PD FVS+ TA A L++ Q + + L I+ D+++ V ALV MY
Sbjct: 424 NLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFVATALVDMY 483
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI-AVGVRPDGITF 396
+KCG+I + F + +++WN +I + H L A FD M ++P+ ITF
Sbjct: 484 AKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITF 543
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
LS++S C +G ++E + F +M YG+ P +HY +VD++ RAG+L A + I
Sbjct: 544 LSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAMVDLLGRAGKLDDAWKFIH 600
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 146/291 (50%), Gaps = 9/291 (3%)
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK--VKEGGGIARARALFDAM-PR 192
+IS F KFG + +A R+F + V Y ++ GYVK R D + P
Sbjct: 75 LISLFCKFGTINEALRVFDSVETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVEPV 134
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTL 248
+ ++ + + G EN ++ E+ G + + N+ A T+++ + K K+D+A+ +
Sbjct: 135 VYDFTYLLQLCG--ENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKM 192
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F ++ RD+ WN ++ GYAQNG +AL L M G + D + VS+ A A + L
Sbjct: 193 FVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGL 252
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
GR + ++ GFDS ++V+ AL+ MY KCG + L F + S ++VSWNT+I
Sbjct: 253 RIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGL 312
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
AQ+ +A + F +M V P ++ + L C G ++ + L+
Sbjct: 313 AQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLL 363
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 200/417 (47%), Gaps = 34/417 (8%)
Query: 8 SIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKD 67
SI L+ T S + H + F + +++ L I+ F + G I A +VFD + TK
Sbjct: 41 SILLELTTSISELHQILPHIIKNGFYNQHLFQTKL-ISLFCKFGTINEALRVFDSVETKL 99
Query: 68 VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFA 123
V ++++L Y + S + F M V + ++ C +N L +
Sbjct: 100 DVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVEPVVYDFTYLLQLCGENFDLKKGMEVHG 159
Query: 124 AMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK------ 173
+ E N + ++++ + K ++ DA ++F MP ++V + ++ GY +
Sbjct: 160 MLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARK 219
Query: 174 -------VKEGGGIARARALFDAMPRRNEVSWTVMINGL-VENGLYEEAWEL-FGRMPQK 224
++E G A + L +P +V GL + ++ A L F M
Sbjct: 220 ALKLVLDMQEDGKKADSITLVSVLPAVADVK------GLRIGRSVHGYAVRLGFDSM--- 270
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
V STA++ + K G+V+ +FQ++ +++ SWN +I G AQNG EEA F +M
Sbjct: 271 -VNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMF 329
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
++P ++ + AC++L L++G+ + L+ + S++SV N+L++MYSKC +
Sbjct: 330 EEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVD 389
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+ F V+WN +I +AQ+ +A + F M + G++PD TF+S+++
Sbjct: 390 IAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDSFTFVSVIT 446
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V+ A + +++ G I AR++FD M + V+TWN+M+ Y G + + LFD M
Sbjct: 472 NVFVATALVDMYAKCGAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQ 531
Query: 96 MK-----NVVSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGR 145
+ N +++ ++++ C + ++E YF M E + Y AM+ + G+
Sbjct: 532 NEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAMVDLLGRAGK 591
Query: 146 LCDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARA--LFDAMP 191
L DA + EMP P + M+ G K+ + + A LF+ P
Sbjct: 592 LDDAWKFIHEMPIKPGITVLGAML-GACKIHKNIELGEKAADRLFELDP 639
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 56/262 (21%)
Query: 44 IAAFSRAGNITAAR---QVFDKMP-TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+ A S G++ + ++ D+M + +V NS+++ Y + ++FD + K
Sbjct: 344 LHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTN 403
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRL--- 152
V+WNAM+ G QN ++EA N F M + ++ ++ ++I+ A+ +
Sbjct: 404 VTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDSFTFVSVITALADLSVTRQAKWIHGL 463
Query: 153 -FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
+ NV T ++D Y K G I AR LFD M R+ ++W MI+G +GL
Sbjct: 464 AIRTNMDTNVFVATALVDMYAKC---GAIETARELFDMMQERHVITWNAMIDGYGTHGLG 520
Query: 212 EEAWELFGRMPQK-----------NVVAST------------------------------ 230
+ A +LF M + +V+++
Sbjct: 521 KAALDLFDDMQNEASLKPNDITFLSVISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYG 580
Query: 231 AMITGFCKQGKVDEAWTLFQQI 252
AM+ + GK+D+AW ++
Sbjct: 581 AMVDLLGRAGKLDDAWKFIHEM 602
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 196/380 (51%), Gaps = 19/380 (5%)
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMIS---GFIK 142
LF + NV ++N M+ G V N D A YF M + N ++ +I G +
Sbjct: 72 LFHNIHKPNVFAFNWMILGMVYNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKTCVGLMD 131
Query: 143 FGRLCDAQRLFKEMPCPN-VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
+ + EM N V+ +ID Y K G + A +FD M R+ SWT M
Sbjct: 132 MKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKC---GSVDYACRVFDGMSERDVASWTSM 188
Query: 202 INGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-- 255
I G G EEA LF RM + N A+I + + G +A+ ++++
Sbjct: 189 ICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGF 248
Query: 256 --DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
D+ +WN +I+G+AQN + E +F +M+ +G+ P+ + +L AC S+ + GR+
Sbjct: 249 IPDVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGRE 308
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ + + GFD+++ + +AL+ MYSKCGS+ D+ F + ++ SWN +I F + +
Sbjct: 309 VHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGM 368
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
A F +M G++P+ +TF +LS C +G +++ + +F LM YG+ EHYA
Sbjct: 369 VDSALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYA 428
Query: 434 CLVDVMSRAGQLQRACEIIR 453
C+VD++ R+G++ A E I+
Sbjct: 429 CIVDLLCRSGKIVEAYEFIK 448
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 151/329 (45%), Gaps = 53/329 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV N I + + G++ A +VFD M +DV +W SM+ + ++G + + LF+ M
Sbjct: 150 DVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMK 209
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLC 147
M+ N +WNA++A + +AF + M + + ++NA+ISGF + +
Sbjct: 210 MEGYEPNDFTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFR 269
Query: 148 DAQRLFKEM----PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWT 199
+ +F+EM CPN V+ ++ V G + R + + R+ N +
Sbjct: 270 ETFTVFREMLVSGICPNQVTIAALLPACGSV---GSVKWGREVHGFICRKGFDANVFIAS 326
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
+I+ + G ++A +F ++ KNV + AMI F K G VD
Sbjct: 327 ALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVD---------------- 370
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
AL LF++M G+QP+++ F + +AC+ +++G + + L +
Sbjct: 371 ---------------SALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGLEIFTL-M 414
Query: 320 KHGFDSDLSVNN--ALVTMYSKCGSIVDS 346
K + ++ + +V + + G IV++
Sbjct: 415 KECYGVEICKEHYACIVDLLCRSGKIVEA 443
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 125/315 (39%), Gaps = 85/315 (26%)
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF--------------------- 218
+ A LF + + N ++ MI G+V NG ++ A F
Sbjct: 66 LKSATLLFHNIHKPNVFAFNWMILGMVYNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKT 125
Query: 219 --GRMPQK----------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
G M K +V+ +I + K G VD A +F + RD+ASW
Sbjct: 126 CVGLMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKCGSVDYACRVFDGMSERDVASW 185
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
MI G+ GR EEAL LF +M G +P+D +
Sbjct: 186 TSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTW------------------------- 220
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ-------PDIVSWNTIIAAFAQHVL 373
NA++ Y++ G DS+ AFG + PD+V+WN +I+ FAQ+
Sbjct: 221 ----------NAIIATYARLG---DSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQ 267
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
+ + + F +M+ G+ P+ +T +LL C G + + + G +
Sbjct: 268 FRETFTVFREMLVSGICPNQVTIAALLPACGSVGSVKWGREVHGFICRK-GFDANVFIAS 326
Query: 434 CLVDVMSRAGQLQRA 448
L+D+ S+ G L+ A
Sbjct: 327 ALIDMYSKCGSLKDA 341
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V+ A+ I +S+ G++ AR VFDK+ K+V +WN+M+ + G + LF M
Sbjct: 321 NVFIASALIDMYSKCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMK 380
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS-----YNAMISGFIKFGRL 146
+ N V++ +++ C + +++ F M E Y ++ + G++
Sbjct: 381 EEGLQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLCRSGKI 440
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARA-LFDAMPRRNEVSWTVMINGL 205
+A K MP S K+ +A+ A M S+ + N
Sbjct: 441 VEAYEFIKAMPIQVTESIAGAFLNGCKIHGRKDLAKKMAEEIMRMQLNGSGSFVTLSNIY 500
Query: 206 VENGLYEEAWELFGRMPQKNV 226
G +EEA + M ++NV
Sbjct: 501 AAEGDWEEAGNVRKVMKERNV 521
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 133/455 (29%), Positives = 223/455 (49%), Gaps = 63/455 (13%)
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDE 117
Q+ +++ +++AY G S+ +FD++ KNV WN+++ G V+N D
Sbjct: 51 QILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDN 110
Query: 118 AFNYFAAM-----PERNAASYNAMISGFIK---FGRLCDAQRLFKEMPCPNVVSYTVMID 169
A F M P+ + + +SG I+ G+L + L VV +VM
Sbjct: 111 AIVLFRQMGRCLLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVM-S 169
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENG-----LYEEAWELFGRMPQK 224
Y++ +E G A +FD MP+RN S+ V+I+G G LY + W F RM +
Sbjct: 170 MYIRCREFGD---AMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQ 226
Query: 225 --------------------------------------------NVVASTAMITGFCKQG 240
+V +++I + +
Sbjct: 227 GYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSN 286
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLF 299
K+ + +F Q++ R+I W MI GY QNG E AL LF +M R ++P+ + VS+
Sbjct: 287 KLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVL 346
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDI 358
AC L L G+Q +A IK F+ +S+ NAL+ MY+KCGS+ + F S D
Sbjct: 347 PACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDA 406
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
++W++II+A+ H +A + + +M+ G++PD IT + +LS CCR+G +DE ++++N
Sbjct: 407 ITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNS 466
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ +Y + P E C+VD++ R+GQL +A + IR
Sbjct: 467 LTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIR 501
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 124/284 (43%), Gaps = 54/284 (19%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ + I +SR+ + +R+VFD+M ++++ W +M+ Y +G P+ + LF M
Sbjct: 271 DVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQ 330
Query: 96 MK-----NVVSWNAMVAGC--VQNDMLDEAFNYFAAMPERN--AASYNAMISGFIKFGRL 146
K N VS +++ C + M + + F+ E N + NA+I + K G L
Sbjct: 331 RKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSL 390
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
A+R+F SY+ ++ ++W+ +I+
Sbjct: 391 DYARRVFDNG------SYS---------------------------KDAITWSSIISAYG 417
Query: 207 ENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+G +EA + M Q+ + + +++ C+ G VDE +++ + ++
Sbjct: 418 LHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSV 477
Query: 263 MITG-----YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
I G ++G+ ++AL+ +M + P ++ SL TA
Sbjct: 478 EICGCVVDLLGRSGQLDQALDFIREM---PIIPGPSVWGSLLTA 518
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/429 (27%), Positives = 208/429 (48%), Gaps = 50/429 (11%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----E 127
NS++ Y G+ ++ LF+ + ++ W +M++ QN+ +EA + F M E
Sbjct: 242 NSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVE 301
Query: 128 RNAASYNAMISGFIKFGRLCDAQR-----LFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR 182
N + ++++ + GRL + + L M + +ID Y + ++
Sbjct: 302 PNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWK---MSS 358
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV--------------- 227
L ++ N VSW +I+ GL +EA F M K ++
Sbjct: 359 CEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASAS 418
Query: 228 -----------------------ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
+++ + K G A+T+F +I+ + I +WN MI
Sbjct: 419 SGSIQFGQQIHGHVMKRGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMI 478
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
G++QNG EAL+LF +M + ++ + + F+S AC++L LD+G+ + +I G
Sbjct: 479 CGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQ 538
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+DL ++ ALV MY+KCG + ++ F + +VSW+T+IAA H A S F +M
Sbjct: 539 NDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKM 598
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
+ ++P+ +TF+++LS C AG + E FN M YGI P EH+A +VD++SRAG
Sbjct: 599 VLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGD 658
Query: 445 LQRACEIIR 453
+ A EII+
Sbjct: 659 INGAYEIIK 667
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 194/413 (46%), Gaps = 28/413 (6%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV--------- 106
A++VFD+M +D+V W+S+++ Y +G + +F +M + + + M+
Sbjct: 156 AKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGK 215
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
GC++ + M + S N++I + + G LC A+RLF+ + + +T
Sbjct: 216 IGCLRLAKSVHGYVMREGMVGDGSLS-NSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTS 274
Query: 167 MIDGYVKVKEGGGIARARALF----DAMPRRNEVSWTVMIN-----GLVENGLYEEAWEL 217
MI Y + A +F D+ N+V+ ++N G ++ G + L
Sbjct: 275 MISAY---NQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVL 331
Query: 218 FGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
M + A+I + K+ L I +I SWN +I+ YA+ G +EA+
Sbjct: 332 RNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAM 391
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
F+ MV G+ PD S +A AS + G+Q + V+K GF + V N+L+ MY
Sbjct: 392 AFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFDEF-VQNSLMDMY 450
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
SKCG + F + IV+WN +I F+Q+ + +A S FD+M + + +TFL
Sbjct: 451 SKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFL 510
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY--ACLVDVMSRAGQLQRA 448
S + C G +D+ + + ++ +++ Y LVD+ ++ G LQ A
Sbjct: 511 SAIQACSNLGYLDKGKWIHHKII---VTGNQNDLYIDTALVDMYAKCGDLQTA 560
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG 219
N ++ T +++ Y ++ G + +R +F P + ++V+I + N L+ E LF
Sbjct: 32 NPLASTKLLESYSQM---GSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHLFREVLSLFN 88
Query: 220 RMPQ-----------------KNVVASTAMI-----------TGFCKQGKVD-------- 243
Q + V +I +GFC+ +
Sbjct: 89 HHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYG 148
Query: 244 ------EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
+A +F ++ RD+ W+ +I+ Y +NG E L +F M+ G++PD ++ +S
Sbjct: 149 ELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLS 208
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
+ AC + L + + V++ G D S++N+L+ MYS+CG + ++ F
Sbjct: 209 VAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRS 268
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
W ++I+A+ Q+ + +A F +M V P+ +T +S+L+ C R G++ E
Sbjct: 269 TSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKE 322
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
N +AST ++ + + G + + +F D ++++I + N E L+LF+
Sbjct: 30 HNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHLFREVLSLFNH 89
Query: 283 MVRTG---MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSK 339
++ G Q ++ S+ A + L GR+ + ++K GF D + +LV MY +
Sbjct: 90 HIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGE 149
Query: 340 CGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSL 399
+ D++ F + D+V W++II+ + ++ +Y + F MI G+RPD + LS+
Sbjct: 150 LCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSV 209
Query: 400 LSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
C + G + + ++ ++ + G+ L+ + S+ G L RA
Sbjct: 210 AEACGKIGCLRLAKSVHGYVMRE-GMVGDGSLSNSLIVMYSQCGYLCRA 257
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 123/284 (43%), Gaps = 23/284 (8%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+D + N + +S+ G ++A +F+K+ K +V WN M+ + +G + +LFD M
Sbjct: 438 FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEM 497
Query: 95 PMK----NVVSWNAMVAGCVQNDMLDEA----FNYFAAMPERNAASYNAMISGFIKFGRL 146
N V++ + + C LD+ + + A++ + K G L
Sbjct: 498 FKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDL 557
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMI 202
AQ++F + +VVS++ MI + G I A +LF M + NEV++ ++
Sbjct: 558 QTAQKVFDSIVEKSVVSWSTMIAAH---GIHGQINAATSLFHKMVLSNIKPNEVTFMNIL 614
Query: 203 NGLVENGLYEEAWELFGRMPQ-----KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
+ G +E F M NV +++ + G ++ A+ + + IR
Sbjct: 615 SACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVA 674
Query: 258 AS-WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
AS W ++ G GR + + ++ G+ DD + +L +
Sbjct: 675 ASIWGALLNGCRIYGRMDMIEYIAEEL--GGISTDDTGYYTLLS 716
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/501 (27%), Positives = 224/501 (44%), Gaps = 90/501 (17%)
Query: 38 YRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK 97
Y NL ++ S++G++ A+ +F+ MP K+ + WNSM+ Y G+P++S LF M +
Sbjct: 93 YSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLD 152
Query: 98 --NVVSWNAMVAGCV---------------------------QNDM-------------- 114
V +A V V + D
Sbjct: 153 PLETVHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCG 212
Query: 115 -LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK 173
LD A + E + S +A++SG+ GR+ DA+++F P V + +I GYV
Sbjct: 213 DLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVS 272
Query: 174 VKEGGGIARARALFDAMPRRNEVSW-------------TVMINGLVENGLYEEAWE---- 216
G A ALF+ M RRN V W + ++N + +++ A++
Sbjct: 273 ---NGEEMEALALFNKM-RRNGV-WGDFSAVANILSISSSLLNVELVKQMHDHAFKIGAT 327
Query: 217 ------------------------LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQI 252
LF + + + MIT +C G+V++A +F +
Sbjct: 328 HDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSM 387
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
+ + SWN ++ G QN EAL+ FS M + ++ D F S+ +ACA + L+ G
Sbjct: 388 PNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGE 447
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
Q + I G +SD + +LV Y KCG + F + D VSWNT++ +A +
Sbjct: 448 QLFGKAITLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNG 507
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY 432
+A + F++M GVRP ITF +LS C G ++E +LF M HDY I P EHY
Sbjct: 508 YGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHY 567
Query: 433 ACLVDVMSRAGQLQRACEIIR 453
+C+VD+ +R G A +I
Sbjct: 568 SCMVDLFARVGCFGEAMYLIE 588
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 120/473 (25%), Positives = 214/473 (45%), Gaps = 51/473 (10%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
AR H L+ + S V N + +SR G++ A ++FD+MP + +WN+++ A+
Sbjct: 13 ARQLHLSLLKTGNLHS-SVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLIEAH 71
Query: 79 WHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMIS 138
+ G S LF AMP K SWN +V+ ++ L +A F AMP +N +N+MI
Sbjct: 72 INLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNSMIH 131
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA-----------RARALF 187
G+ + G ++ LFKEM + TV D +V G A AR
Sbjct: 132 GYSRHGYPRNSLLLFKEMNLDPL--ETVHRDAFVLSTVFGACADLFALDCGKQVHARVFI 189
Query: 188 DAMP-RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAW 246
D +++V + ++N + G + A + G + + + + +A+++G+ G++ +A
Sbjct: 190 DGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEVDDFSLSALVSGYANAGRMSDAR 249
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
+F WN +I+GY NG EAL LF++M R G+ D ++ + +SL
Sbjct: 250 KVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGVWGDFSAVANILSISSSLL 309
Query: 307 LLDQGRQ----------TYALVI-----------KHGFDS----------DLSVNNALVT 335
++ +Q T+ +V+ +H DS D + N ++T
Sbjct: 310 NVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMIT 369
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
+Y CG + D++ F ++SWN+I+ Q+ +A F M + V+ D +
Sbjct: 370 VYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFS 429
Query: 396 FLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC--LVDVMSRAGQLQ 446
F S++S C ++ LF + + S+ C LVD + G ++
Sbjct: 430 FASVISACAIKSSLELGEQLFGKAI---TLGLESDQIICTSLVDFYCKCGLVE 479
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 141/301 (46%), Gaps = 27/301 (8%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H + A H D+ A+ + A+S+ + + ++F ++ D + N+M+T Y +
Sbjct: 318 HDHAFKIGATH----DIVVASTLLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCN 373
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAM 136
G + ++ +F++MP K ++SWN+++ G QN EA + F+ M + + S+ ++
Sbjct: 374 CGRVEDAKEVFNSMPNKTLISWNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASV 433
Query: 137 ISGFIKFGRLCDAQRLFKEMPCPNVVS----YTVMIDGYVKVKEGGGIARARALFDAMPR 192
IS L ++LF + + S T ++D Y K G + R +FD M +
Sbjct: 434 ISACAIKSSLELGEQLFGKAITLGLESDQIICTSLVDFYCKC---GLVEMGRKVFDGMIK 490
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF---CKQ-GKVDEAWTL 248
+EVSW M+ G NG EA LF M V S TG C G V+E L
Sbjct: 491 TDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRPSAITFTGILSACDHCGLVEEGRDL 550
Query: 249 FQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
F+ ++ I ++ M+ +A+ G EA+ L +M Q D +++S+ C
Sbjct: 551 FRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYLIEEM---PFQADANMWLSVLRGCV 607
Query: 304 S 304
S
Sbjct: 608 S 608
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/396 (31%), Positives = 196/396 (49%), Gaps = 45/396 (11%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM- 125
+++ N ++ Y G +++R +FD K+VV+W M+ G +D +EA F M
Sbjct: 178 ELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELML 237
Query: 126 ---PERNAASYNAMISGFIKFGRLCDAQRLF-----KEMPCPNVVSYTVMIDGYVKVKEG 177
E N + A++S G L +R+ K M C ++ + ++D YVK
Sbjct: 238 LSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRC-SLSLHNALLDMYVKCD-- 294
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFC 237
L DA ELF RM K+V + T+M+ G+
Sbjct: 295 -------CLVDAR-------------------------ELFDRMATKDVYSWTSMVNGYA 322
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
K G ++ A F Q ++ W+ MI GY+QN + +E+L LF +M+ G+ P + VS
Sbjct: 323 KCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVS 382
Query: 298 LFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP 356
+ +AC L L+ G + V+ +++ NA+V MY+KCGSI + F +
Sbjct: 383 VLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPER 442
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
+++SWNT+IA +A + +A + FDQM +G P+ ITF+SLL+ C G I E F
Sbjct: 443 NLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYF 502
Query: 417 NLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+ M YGI P HYAC+VD++ R G L+ A ++I
Sbjct: 503 DNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLI 538
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 199/432 (46%), Gaps = 55/432 (12%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
I ++ G + ARQVFD+ KDVVTW +M+ Y + + +F+ M + +V
Sbjct: 186 IHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNE 245
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNA----ASYNAMISGFIKFGRLCDAQRLFKE 155
V+ A+V+ C L+ + E+N + +NA++ ++K L DA+ LF
Sbjct: 246 VTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDR 305
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
M +V S+T M++GY K G + AR FD PR+N V W+ MI G +N +E+
Sbjct: 306 MATKDVYSWTSMVNGYAKC---GDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESL 362
Query: 216 ELFGRMPQKNVVA----------------------------------------STAMITG 235
+LF M ++ VV A++
Sbjct: 363 KLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDM 422
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+ K G +D A +F + R++ SWN MI GYA NGR ++A+N+F QM G +P+++ F
Sbjct: 423 YAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITF 482
Query: 296 VSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQT 353
VSL TAC+ L+ +GR+ + + K+G + +V + + G + ++ +L
Sbjct: 483 VSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMP 542
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
QP +W ++ A H AR ++ + GI L L + C K +
Sbjct: 543 MQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVL-LANTCANDRKWSDVR 601
Query: 414 NLFNLMVHDYGI 425
+ +LM D G+
Sbjct: 602 RVRSLM-KDKGV 612
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Query: 233 ITGFC---KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
+ FC G + A T+F ++ + WN MI GY + A + F M + ++
Sbjct: 82 VIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVE 141
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
D FV AC + +G Y +V K GFD +L V N L+ Y++ G + ++
Sbjct: 142 MDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQV 201
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
F ++S D+V+W T+I +A H +A F+ M+ V P+ +T ++++S C G +
Sbjct: 202 FDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNL 261
Query: 410 D 410
+
Sbjct: 262 E 262
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
++ DVY + +++ G++ +AR+ FD+ P K+ V W++M+ Y + P+ S LF
Sbjct: 307 ATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFH 366
Query: 93 AMPMKNVV----------------------SW------------------NAMVAGCVQN 112
M + VV W NA+V +
Sbjct: 367 EMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKC 426
Query: 113 DMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMI 168
+D A F+ MPERN S+N MI+G+ GR A +F +M PN +++ ++
Sbjct: 427 GSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLL 486
Query: 169 DGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMINGLVENGLYEEAWELFGRMPQ 223
GG I+ R FD M R+ + + M++ L GL EEA++L MP
Sbjct: 487 TA---CSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPM 543
Query: 224 KNVVASTAMITGFCK-QGKVDEA 245
+ A+ + C+ G V+ A
Sbjct: 544 QPCEAAWGALLNACRMHGNVELA 566
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/339 (33%), Positives = 177/339 (52%), Gaps = 8/339 (2%)
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN--VVSYTVMIDGYVKVKEGGG 179
F + ER++ S+N MISG +K R +A +F+ M + +S ++
Sbjct: 161 FDEISERDSVSWNVMISGCVKCRRFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRN 220
Query: 180 IARARALFDAMPRRNEVSWTV-MINGLVEN----GLYEEAWELFGRMPQKNVVASTAMIT 234
+ + + + + E+ +T+ M N L++ G A E+F M +KNV T+M+T
Sbjct: 221 VEVGKEIHGFIIEK-ELDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVT 279
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
G+ G++D+A LF + RD+ W MI GY Q R +EA+ LF +M G++PD I
Sbjct: 280 GYVSCGELDKARDLFDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRGVKPDKFI 339
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
V+L T CA L L+ GR + V ++ D V +L+ MY+KCG + S F
Sbjct: 340 VVALLTCCAQLGTLEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLK 399
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
+ D SW +II A + +A F++M G +PD +TF+ LL+ C G ++E
Sbjct: 400 EKDTASWTSIICGLAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHK 459
Query: 415 LFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
LF+ M YGI P EHY C +D++ RAG L A E+I+
Sbjct: 460 LFHSMSCIYGIEPNLEHYGCFIDLLGRAGLLHEAEELIK 498
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 196/395 (49%), Gaps = 43/395 (10%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM- 125
+++ N ++ Y G +++R +FD K+VV+W M+ G +D +EA F M
Sbjct: 128 ELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELML 187
Query: 126 ---PERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS----YTVMIDGYVKVKEGG 178
E N + A++S G L +R+ +++ N+ + ++D YVK
Sbjct: 188 LSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCD--- 244
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCK 238
L DA ELF RM K+V + T+M+ G+ K
Sbjct: 245 ------CLVDAR-------------------------ELFDRMATKDVYSWTSMVNGYAK 273
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
G ++ A F Q ++ W+ MI GY+QN + +E+L LF +M+ G+ P + VS+
Sbjct: 274 CGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSV 333
Query: 299 FTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
+AC L L+ G + V+ +++ NA+V MY+KCGSI + F + +
Sbjct: 334 LSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERN 393
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN 417
++SWNT+IA +A + +A + FDQM +G P+ ITF+SLL+ C G I E F+
Sbjct: 394 LISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFD 453
Query: 418 LMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
M YGI P HYAC+VD++ R G L+ A ++I
Sbjct: 454 NMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLI 488
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 199/432 (46%), Gaps = 55/432 (12%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
I ++ G + ARQVFD+ KDVVTW +M+ Y + + +F+ M + +V
Sbjct: 136 IHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNE 195
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNA----ASYNAMISGFIKFGRLCDAQRLFKE 155
V+ A+V+ C L+ + E+N + +NA++ ++K L DA+ LF
Sbjct: 196 VTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDR 255
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
M +V S+T M++GY K G + AR FD PR+N V W+ MI G +N +E+
Sbjct: 256 MATKDVYSWTSMVNGYAKC---GDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESL 312
Query: 216 ELFGRMPQKNVVA----------------------------------------STAMITG 235
+LF M ++ VV A++
Sbjct: 313 KLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDM 372
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+ K G +D A +F + R++ SWN MI GYA NGR ++A+N+F QM G +P+++ F
Sbjct: 373 YAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITF 432
Query: 296 VSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQT 353
VSL TAC+ L+ +GR+ + + K+G + +V + + G + ++ +L
Sbjct: 433 VSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMP 492
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
QP +W ++ A H AR ++ + GI L L + C K +
Sbjct: 493 MQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVL-LANTCANDRKWSDVR 551
Query: 414 NLFNLMVHDYGI 425
+ +LM D G+
Sbjct: 552 RVRSLM-KDKGV 562
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 89/181 (49%), Gaps = 3/181 (1%)
Query: 233 ITGFC---KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
+ FC G + A T+F ++ + WN MI GY + A + F M + ++
Sbjct: 32 VIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVE 91
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
D FV AC + +G Y +V K GFD +L V N L+ Y++ G + ++
Sbjct: 92 MDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQV 151
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
F ++S D+V+W T+I +A H +A F+ M+ V P+ +T ++++S C G +
Sbjct: 152 FDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNL 211
Query: 410 D 410
+
Sbjct: 212 E 212
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 53/263 (20%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
++ DVY + +++ G++ +AR+ FD+ P K+ V W++M+ Y + P+ S LF
Sbjct: 257 ATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFH 316
Query: 93 AMPMKNVV----------------------SW------------------NAMVAGCVQN 112
M + VV W NA+V +
Sbjct: 317 EMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKC 376
Query: 113 DMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMI 168
+D A F+ MPERN S+N MI+G+ GR A +F +M PN +++ ++
Sbjct: 377 GSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLL 436
Query: 169 DGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMINGLVENGLYEEAWELFGRMPQ 223
GG I+ R FD M R+ + + M++ L GL EEA++L MP
Sbjct: 437 TA---CSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPM 493
Query: 224 KNVVASTAMITGFCK-QGKVDEA 245
+ A+ + C+ G V+ A
Sbjct: 494 QPCEAAWGALLNACRMHGNVELA 516
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 124/359 (34%), Positives = 189/359 (52%), Gaps = 42/359 (11%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
N +++ + KFG L +A +LF MP N +S +MI Y+ E G I A+ LFD M R
Sbjct: 111 NHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYL---EMGNIENAKNLFDEMTER 167
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRM------PQK----------------------- 224
N +W M+ GLV+ GL EEA LF RM P +
Sbjct: 168 NVATWNAMVTGLVKFGLNEEALLLFSRMNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVH 227
Query: 225 ----------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
N V ++ + K G + + + + ++ +WN ++ G AQN E
Sbjct: 228 AYVAKCGFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFE 287
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
L+ + M G +PD + FVS+ ++C+ LA L QG+Q +A VIK G S +SV ++LV
Sbjct: 288 GVLDHYCMMKMAGYRPDKITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVSVISSLV 347
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
+MYSKCGS+ DS AF + + D+V W+++IAA+ H KA F+ + + +
Sbjct: 348 SMYSKCGSLQDSIKAFLECEERDVVIWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEV 407
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
TFLSLL C +G D+ ++ F++MV YG+ R EHY C+VD++ R+G L+ A +IR
Sbjct: 408 TFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETMIR 466
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 200/432 (46%), Gaps = 48/432 (11%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFD 61
L SI++ + S + H L +F SS D + +N + +S+ G + A ++FD
Sbjct: 74 LFSILIQSCIPTNSVSLGKQLHSL-IFTSGCSS-DKFISNHLLNFYSKFGELNNAVKLFD 131
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
+MP ++ ++ N M+ AY G ++++ LFD M +NV +WNAMV G V+ + +EA
Sbjct: 132 RMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLL 191
Query: 122 FAAM------PE--------RNAASYNAMISG-------------------------FIK 142
F+ M P+ R A A+ G ++K
Sbjct: 192 FSRMNVLGFVPDEYSFGSVLRGCAHLRALFVGEQVHAYVAKCGFEFNSVVGCSLAHMYMK 251
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFD-AMPRRNEVSWTVM 201
G LC+ +R+ K MP N+V++ ++ G + + G+ + A R +++++ +
Sbjct: 252 AGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSV 311
Query: 202 INGLVENGLYEEAWELFGRMPQKNVVASTAMITG----FCKQGKVDEAWTLFQQIRCRDI 257
I+ E + ++ + + + ++I+ + K G + ++ F + RD+
Sbjct: 312 ISSCSELATLCQGKQIHAEVIKAGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEERDV 371
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
W+ MI Y +G+ E+A+ LF+ + M +++ F+SL AC+ L D+G + +
Sbjct: 372 VIWSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDM 431
Query: 318 VI-KHGFDSDLSVNNALVTMYSKCGSIVDSE-LAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
++ K+G + L +V + + G + ++E + D + W T+++A H
Sbjct: 432 MVEKYGLKARLEHYTCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLLSACKIHKNEE 491
Query: 376 KARSYFDQMIAV 387
AR ++++ +
Sbjct: 492 MARRVAEEVLRI 503
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/419 (29%), Positives = 201/419 (47%), Gaps = 55/419 (13%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ N I A+ + + AR+VFD + +DVV+W S+ + Y GFP+ +F M
Sbjct: 112 DVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREM- 170
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF-IKFGRLCDAQRLFK 154
W +G N M + A E I GF ++ G +
Sbjct: 171 -----GW----SGVKPNPMTVSSI--LPACAELKDLKSGKEIHGFAVRHGMVV------- 212
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEA 214
N+ + ++ Y K + AR +FD MP R+ VSW ++ +N YE+
Sbjct: 213 -----NLFVCSALVSLYAKCLS---VREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKG 264
Query: 215 WELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
+ LF +M + V A D A+WN +I G +NGR E
Sbjct: 265 FSLFLKMSRDGVRA---------------------------DEATWNAVIGGCMENGRSE 297
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
EA+ +F +M + G +P+++ S+ AC+ L G++ + V +H DL+ AL+
Sbjct: 298 EAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALL 357
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
MY+KCG + S F + D+V+WNT+I A A H +A FD+M+ V+P+ +
Sbjct: 358 YMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSV 417
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
TF +LS C + ++E + +FN M D+ + P + HY+C+VD+ SRAG+L A + I+
Sbjct: 418 TFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQ 476
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 147/313 (46%), Gaps = 40/313 (12%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------- 224
G RAR LFD +P+ + + + +I+ L +GL EA +++ + ++
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 225 --------------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
+V A+I + K V+ A +F + RD+
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVV 145
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SW + + Y + G + +++F +M +G++P+ + S+ ACA L L G++ +
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFA 205
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
++HG +L V +ALV++Y+KC S+ ++ + F D+VSWN ++ A+ ++ Y K
Sbjct: 206 VRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 265
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
S F +M GVR D T+ +++ C G+ +E++ +F M G P + ++
Sbjct: 266 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKM-QKMGFKPNEITISSILPA 324
Query: 439 MSRAGQLQRACEI 451
S + L+ EI
Sbjct: 325 CSFSENLRMGKEI 337
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 135/294 (45%), Gaps = 27/294 (9%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
+H +++ + ++ +++ ++ AR VFD MP +DVV+WN +LTAY+ + + +
Sbjct: 207 RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFS 266
Query: 90 LFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGR 145
LF M V +WNA++ GC++N +EA F M + IS +
Sbjct: 267 LFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACS 326
Query: 146 LCDAQRLFKEMPC--------PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS 197
+ R+ KE+ C ++ S T ++ Y K G + +R +FD M R++ V+
Sbjct: 327 FSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKC---GDLNLSRNVFDMMRRKDVVA 383
Query: 198 WTVMINGLVENGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQ--- 250
W MI +G +EA LF +M Q N V T +++G V+E +F
Sbjct: 384 WNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMG 443
Query: 251 --QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ D ++ ++ Y++ GR EA M M+P + +L AC
Sbjct: 444 RDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGM---PMEPTASAWGALLAAC 494
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 103/211 (48%), Gaps = 12/211 (5%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
+H+ D+ + +++ G++ +R VFD M KDVV WN+M+ A G + +
Sbjct: 343 RHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEALF 402
Query: 90 LFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGF 140
LFD M + N V++ +++GC + +++E F +M E +A Y+ ++ +
Sbjct: 403 LFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIY 462
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSW 198
+ GRL +A + + MP S + +V + +A+ A+ LF+ P N ++
Sbjct: 463 SRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEP-NNPGNY 521
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVAS 229
+ N LV ++ EA ++ M ++ + +
Sbjct: 522 VSLFNILVTAKMWSEASQVRILMKERGITKT 552
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 225/472 (47%), Gaps = 58/472 (12%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
KH +V+ +N + + + A+ VFD MP ++V+TWNS+ + Y + GFPQ
Sbjct: 270 KHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLN 329
Query: 90 LFDAMPMKNV----VSWNAMVAGC----------------VQNDMLDEAF---------- 119
+F M + V ++ ++++ C V++ M+++ F
Sbjct: 330 VFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYA 389
Query: 120 ---------NYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTV 166
F MP RN ++N++ S ++ G +F+EM P++V+
Sbjct: 390 NCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLS 449
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY------EEAWELFGR 220
++ +++ + + + R V + N L+ LY EA +F
Sbjct: 450 ILHACSDLQD---LKSGKVIHGFAVRHGMVEDVFVCNALLS--LYAKCVCVREAQVVFDL 504
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEA 276
+P + V + ++T + + ++ +F Q+ ++ +W+++I G +N R EEA
Sbjct: 505 IPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEA 564
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+ +F +M G +PD+ S+ AC+ L G++ + V +H D DL+ NALV M
Sbjct: 565 MEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDM 624
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y+KCG + S F D+ SWNT+I A H +A S F++M+ V+PD TF
Sbjct: 625 YAKCGGLSLSRNVFDMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATF 684
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+LS C + ++E + +FN M D+ + P +EHY C+VD+ SRAG L+ A
Sbjct: 685 TCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEA 736
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 125/498 (25%), Positives = 216/498 (43%), Gaps = 114/498 (22%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV N I A+ + + AR+VFD + +DVVTWNS+ Y + GFPQ +F M
Sbjct: 74 DVSIGNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMG 133
Query: 96 MKNV----VSWNAMVAGC----------------VQNDMLDEAF------NYFAA----- 124
+ V ++ ++++ GC V++ M+++ F N++A
Sbjct: 134 LNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVR 193
Query: 125 --------MPERNAASYNAMISGFIKFGRLCDAQRLFKEM------PCPNVVSYTV---- 166
MP R+ ++N++ S ++ G +F+EM P P VS +
Sbjct: 194 EAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACS 253
Query: 167 ---------MIDGY----------------VKVKEGGGIAR-ARALFDAMPRRNEVSWTV 200
I G+ V + E R A+A+FD MP RN ++W
Sbjct: 254 DLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNS 313
Query: 201 MINGLVENGLYEEAWELFGRMPQKNV-------------------VASTAMITGFC-KQG 240
+ + V G ++ +F M V + S I GF K G
Sbjct: 314 LASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHG 373
Query: 241 KVD-------------------EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
V+ EA T+F + R++ +WN + + Y G ++ LN+F
Sbjct: 374 MVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFR 433
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+MV G++PD + +S+ AC+ L L G+ + ++HG D+ V NAL+++Y+KC
Sbjct: 434 EMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCV 493
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+ ++++ F ++ SWN I+ A+ + Y K F QM V+ D IT+ ++
Sbjct: 494 CVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIG 553
Query: 402 VCCRAGKIDESMNLFNLM 419
C + +I+E+M +F M
Sbjct: 554 GCVKNSRIEEAMEIFRKM 571
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 175/403 (43%), Gaps = 50/403 (12%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
+H DV+ N ++ +++ + A+ VFD +P ++V +WN +LTAY+ + +
Sbjct: 472 RHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLY 531
Query: 90 LFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGR 145
+F M V ++W+ ++ GCV+N ++EA F M I ++
Sbjct: 532 MFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACS 591
Query: 146 LCDAQRLFKEMPCP--------NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS 197
L + R+ KE+ C ++ ++D Y K GG++ +R +FD MP ++ S
Sbjct: 592 LSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKC---GGLSLSRNVFDMMPIKDVFS 648
Query: 198 WTVMI--NGLVENGLYEEAWELFGRMPQKNVVASTAMIT---GFCKQGK-VDEAWTLFQQ 251
W MI NG+ NG +EA LF +M V +A T C V+E +F
Sbjct: 649 WNTMIFANGMHGNG--KEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNS 706
Query: 252 IRCRD------IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC--- 302
+ RD + ++ Y++ G EEA +M M+P + + + C
Sbjct: 707 MS-RDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRM---PMEPTAIAWKAFLAGCRVY 762
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVT--MYSKCGSIVDSELAFGQTSQPDIVS 360
++ L + + +G + +++ N LVT ++S+ I G T P S
Sbjct: 763 KNVELAKISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPG-CS 821
Query: 361 W-------NTIIAAFAQHVLYYKARSYFDQMI----AVGVRPD 392
W +T +A ++ K ++ D++ A G +PD
Sbjct: 822 WFHVGNRVHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPD 864
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%)
Query: 270 NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSV 329
+G EA+ +++ G++PD +F+++ ACA+ + +Q + + G SD+S+
Sbjct: 18 HGLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSI 77
Query: 330 NNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV 389
NA + Y KC + + F D+V+WN++ A + + + F +M V
Sbjct: 78 GNAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKV 137
Query: 390 RPDGITFLSLLSVC 403
+ + +T S+L C
Sbjct: 138 KANPLTVSSILPGC 151
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/423 (28%), Positives = 218/423 (51%), Gaps = 25/423 (5%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNV 99
++ +++AG+ A VF MP +D+++WNSM+ ++ G H+ L M N
Sbjct: 494 LSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNY 553
Query: 100 VSWNAMVAGCVQNDMLD--EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP 157
V++ ++ C + L AF A+ N N +++ + KFG + +AQ++ K MP
Sbjct: 554 VTFTTALSACYNLEKLKIVHAFVIHFAV-HHNLIIGNTLVTMYGKFGLMDEAQKVCKIMP 612
Query: 158 CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL 217
+VV++ +I G+ K+ +A F+ M R +S + I L+ + +
Sbjct: 613 ERDVVTWNALIGGHADDKDPNATIQA---FNLMRREGLLSNYITIVNLLGTCMSPDYLLK 669
Query: 218 FGRMPQKNVVAS---------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
G ++V + +++IT + + G ++ + +F + ++ ++WN + + A
Sbjct: 670 HGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANA 729
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
G GEEAL ++M G+ D F +L +LD+G+Q ++ +IK GF+ D
Sbjct: 730 HYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEY 789
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQPDIVS---WNTIIAAFAQHVLYYKARSYFDQMI 385
V NA + MY KCG I D F P I S WN +I+A A+H + +A F +M+
Sbjct: 790 VLNATMDMYGKCGEIDD---VFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEML 846
Query: 386 AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
+G++PD +TF+SLLS C G +DE + F+ M ++G+P EH C++D++ R+G+L
Sbjct: 847 DLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRL 906
Query: 446 QRA 448
A
Sbjct: 907 AEA 909
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 187/393 (47%), Gaps = 23/393 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM- 94
+ + N + +S+ G+I A+ VFDKM ++ +WN+M++ + G+ + F M
Sbjct: 181 NTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMF 240
Query: 95 -----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI-SGFIKF----G 144
P V++ +MV C ++ + E + N + + + F G
Sbjct: 241 ENGVTPSSYVIA--SMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHG 298
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYV---KVKEGGGIARARALFDAMPRRNEVSWTVM 201
+ +A +LF+E+ PN+VS+T ++ Y KE I R + N ++ +
Sbjct: 299 SVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIR 358
Query: 202 INGLVENGLYEEAWELFGR-----MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
G+ G +++ G + +V + ++I+ F V+EA +F ++ RD
Sbjct: 359 TCGMF--GDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERD 416
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
SWN +IT A NGR EE+L F M RT + D + +L AC S L GR +
Sbjct: 417 TISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHG 476
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
L+ K G +S++ V N+L++MY++ GS D+EL F D++SWN+++A+ + Y
Sbjct: 477 LITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSH 536
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
A +M+ + +TF + LS C K+
Sbjct: 537 AILLLVEMLKTRKAMNYVTFTTALSACYNLEKL 569
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 44/308 (14%)
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
K++ N +++ Y K G I A+ +FD M RN+ SW MI+G V G Y +
Sbjct: 175 KDVIQQNTFYTNTLVNMYSKF---GSIKYAQHVFDKMYDRNDASWNNMISGFVRVGWYHK 231
Query: 214 AWELFGRM------PQKNVVAS----------------------------------TAMI 233
A + F M P V+AS T+++
Sbjct: 232 AMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLL 291
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ G V EA LF++I +I SW ++ YA NG +E LN++ + G+
Sbjct: 292 HFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGN 351
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFD-SDLSVNNALVTMYSKCGSIVDSELAFGQ 352
++ C G Q VIK G D S +SV N+L++M+ S+ ++ F
Sbjct: 352 TMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNN 411
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
+ D +SWN+II A A + + ++ +F M + D IT +LL C A +
Sbjct: 412 MQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWG 471
Query: 413 MNLFNLMV 420
L L+
Sbjct: 472 RGLHGLIT 479
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%)
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
G+ +AL +K + N LV MYSK GSI ++ F + + SWN +I+ F +
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
Y+KA +F M GV P S+++ C R+G + E
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTE 266
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/448 (29%), Positives = 218/448 (48%), Gaps = 49/448 (10%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFP---------QHSRALF----------- 91
NI A ++F ++P + WN M+ + + P +S+ALF
Sbjct: 26 NILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLK 85
Query: 92 -------------DAMPMK-----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY 133
A +K ++ NA++ G L A F M ER+ S+
Sbjct: 86 ACARISNVSCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSW 145
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR- 192
N++I G+ + R + +F+EM +V V + VKV + + DAM
Sbjct: 146 NSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTM---VKVVLACTVLGEWGVVDAMIEY 202
Query: 193 --RNEVSWTVMI-NGLVE----NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEA 245
N+V V + N L++ + + A +F RM +N+V+ AMI G+ K G + A
Sbjct: 203 IEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAA 262
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
LF + RD+ SW MI+ Y+Q G+ +A+ LF +M+ T ++PD++ S+ +ACA +
Sbjct: 263 RKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHI 322
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
LD G + + K+ ++D+ V NAL+ MY KCG++ F + + D VSW ++I
Sbjct: 323 GALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVI 382
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
A A + A + F M+ GVRP TF+ +L C AG +D+ + F M YG+
Sbjct: 383 AGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGL 442
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEIIR 453
P +HY C+VD++SR+G L RA E I+
Sbjct: 443 TPEMKHYGCVVDLLSRSGNLGRAYEFIK 470
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 179/385 (46%), Gaps = 52/385 (13%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ +N I ++ + AR+VFD+M +D+V+WNS++ Y +F+ M
Sbjct: 110 DLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMR 169
Query: 96 MKNV----VSWNAMVAGCV---QNDMLDEAFNYFAAMP-ERNAASYNAMISGFIKFGRLC 147
M +V V+ +V C + ++D Y E + N +I + + +
Sbjct: 170 MADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVD 229
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
A+R+F M N+VS+ MI GY K G + AR LFD MP R+ +SWT MI+ +
Sbjct: 230 LARRVFDRMRDRNMVSWNAMIMGYGK---AGNLVAARKLFDDMPHRDVISWTSMISSYSQ 286
Query: 208 NGLYEEAWELFGRM------PQKNVVAST------------------------------- 230
G + +A LF M P + VAS
Sbjct: 287 AGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYV 346
Query: 231 --AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
A+I +CK G V++ ++F+++ RD SW +I G A NG + ALNLFS M+R G+
Sbjct: 347 GNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGV 406
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDS- 346
+P FV + ACA ++D+G + + + + +G ++ +V + S+ G++ +
Sbjct: 407 RPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAY 466
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQH 371
E PD+V W +++A H
Sbjct: 467 EFIKRMPMDPDVVVWRILLSASQVH 491
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 143/333 (42%), Gaps = 59/333 (17%)
Query: 125 MPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR-- 182
+P + +N + S + + A LF+++P P + + +MI G+ + + R
Sbjct: 6 LPTDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNY 65
Query: 183 ----ARALF----------DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA 228
++ALF A R + VS T + +++ G ++
Sbjct: 66 NLMYSQALFGNNLTYPFLLKACARISNVSCTTVHARVLKLGF------------DSDLFV 113
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
S A+I G+ ++ A +F ++ RD+ SWN +I GY + R E L +F +M +
Sbjct: 114 SNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADV 173
Query: 289 QPDDLIFVSLFTACASLA--------------------------LLDQ-GRQTYALVIKH 321
+ D + V + AC L L+D GR++ + +
Sbjct: 174 KGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARR 233
Query: 322 GFDSDLSVN----NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
FD N NA++ Y K G++V + F D++SW ++I++++Q + KA
Sbjct: 234 VFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKA 293
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
F +M+ V+PD IT S+LS C G +D
Sbjct: 294 VRLFQEMMVTKVKPDEITVASVLSACAHIGALD 326
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 205/398 (51%), Gaps = 19/398 (4%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----E 127
+S++ Y ++ LFD M ++V+ W+AM+AG + +D A F M E
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVE 61
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARA 183
N S+N MI+GF G +A RLF EM P+ + + ++ G +++ +
Sbjct: 62 PNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGSTVSCVLPGVGNLED---VLMG 118
Query: 184 RALFDAMPRRNEVSWTVMINGLVE----NGLYEEAWELFGRMPQKNVVASTAMITGFCKQ 239
+ + + + S +++ L++ G E +F + Q + + A +TG +
Sbjct: 119 KQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRN 178
Query: 240 GKVDEAWTLFQQIRCRD----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
G VD A +F++ + + + +W +I QNG+ EAL LF M G++P+ +
Sbjct: 179 GLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDMQADGVEPNAVTI 238
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
SL AC +++ L G++ + ++ G D+ V +AL+ MY+ CG I S+ F +
Sbjct: 239 PSLIPACGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDMYANCGRIRLSQNCFDEMPF 298
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
++VSWN+I++ +A H + F M+ G +PD ITF S+LS C + G +E +
Sbjct: 299 RNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITFTSVLSACTQNGLTEEGWHY 358
Query: 416 FNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
FN M +Y + P+ EHYAC+V ++SR G+L+ A II+
Sbjct: 359 FNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSIIK 396
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 166/389 (42%), Gaps = 68/389 (17%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDV----VTWNSMLTAYWHSGFPQHSRALFDAM----- 94
IA +SR GN+ A++VF +M + V V+WN M+ + + G + LF M
Sbjct: 36 IAGYSRLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGF 95
Query: 95 -PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQR 151
P + VS G +++ ++ + + + + Y +A++ + + G + R
Sbjct: 96 LPDGSTVSCVLPGVGNLEDVLMGKQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSR 155
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVE 207
+F E+ + S + G + G + A +F N V+WT +I V+
Sbjct: 156 VFDEIDQTEIGSLNAFLTG---LSRNGLVDTALDVFKKFKAGELELNVVTWTSIIASCVQ 212
Query: 208 NGLYEEAWELFGRMPQ---------------------------------------KNVVA 228
NG EA ELF M +V
Sbjct: 213 NGKDMEALELFRDMQADGVEPNAVTIPSLIPACGNISALTHGKEIHCFSLRKGIFDDVYV 272
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+A+I + G++ + F ++ R++ SWN +++GYA +G+ +E + +F M+++G
Sbjct: 273 GSALIDMYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQ 332
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS- 346
+PD + F S+ +AC L ++G + ++ ++ + +VT+ S+ G + ++
Sbjct: 333 KPDSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAY 392
Query: 347 ----ELAFGQTSQPDIVSWNTIIAAFAQH 371
E+ F +PD W ++++ H
Sbjct: 393 SIIKEMPF----EPDACVWGALLSSCRVH 417
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM- 94
DVY + I ++ G I ++ FD+MP +++V+WNS+++ Y G + + +F M
Sbjct: 269 DVYVGSALIDMYANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMML 328
Query: 95 ---PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRL 146
+ +++ ++++ C QN + +E ++YF +M + Y M++ + G+L
Sbjct: 329 QSGQKPDSITFTSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVTLLSRVGKL 388
Query: 147 CDAQRLFKEMP 157
+A + KEMP
Sbjct: 389 EEAYSIIKEMP 399
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 217/423 (51%), Gaps = 19/423 (4%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SW 102
+++AG + AR+ F++M +D ++WN++L Y + +F M VV
Sbjct: 388 YAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCM 447
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
++++ C +L+ + + N + +++I + K G + DA++++ MP
Sbjct: 448 ASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPE 507
Query: 159 PNVVSYTVMIDGYV--KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN-----GLY 211
+VVS +I GY KE + + P +E+++ +I+ E+ G+
Sbjct: 508 WSVVSMNALIAGYAIKDTKEAINLLHEMQILGLKP--SEITFASLIDCCKESPKVILGMQ 565
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQI-RCRDIASWNIMITGYAQN 270
L + + T+++ + K+ E LF ++ + I W +I+G+ QN
Sbjct: 566 IHCAILKNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQN 625
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
++ALNL+ +M + PD FV++ ACA L+ L G++ ++L+ GFD D +
Sbjct: 626 DCSDQALNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHTGFDLDELTS 685
Query: 331 NALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV 389
+ALV MY+KCG + + F + + D++SWN++I FA++ +A FD+M V
Sbjct: 686 SALVDMYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAKNGYAERALKVFDEMTLSSV 745
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
PD +TFL +L+ C AG + E +F+ MV+ Y I PR +H+AC+VD++ R G L+ A
Sbjct: 746 SPDDVTFLGVLTACSHAGLVSEGRQIFDNMVNYYSIHPRVDHHACMVDLLGRCGFLEEAE 805
Query: 450 EII 452
E I
Sbjct: 806 EFI 808
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 176/373 (47%), Gaps = 41/373 (10%)
Query: 119 FNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG 178
FN + + + A++ A+I G+++ G DA +LF EM V+ V++ G
Sbjct: 130 FNSVSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEMQSGFVLDELVIVTVLNACVNLG 189
Query: 179 GIARARALFDAMPR-RNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS-------- 229
+ A LFD M N V+W VMI+G + G ++EA E + +M V++S
Sbjct: 190 KLDHACELFDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVL 249
Query: 230 -------------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
+++I + K + +A +F + R++
Sbjct: 250 SAVAGLGDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEMLCDAKKVFDVVCDRNVV 309
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
WN ++ YAQNG + + LFS+M+ G PD+ + S+ ++CA LD GRQ ++ +
Sbjct: 310 MWNTILGVYAQNGCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTI 369
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
IK F +L VNNALV MY+K G++ ++ F + D +SWN I+ + Q +A
Sbjct: 370 IKKRFTDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAF 429
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
+ F +M GV PD + S+LS C ++ + L V G+ + L+D+
Sbjct: 430 NMFRRMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSV-KLGLDTNLFAGSSLIDM 488
Query: 439 MSRAGQLQRACEI 451
S+ G ++ A +I
Sbjct: 489 YSKCGGIEDARKI 501
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 190/420 (45%), Gaps = 61/420 (14%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK---DVVTWNSMLTAYWHSGFPQHSRALFDAMP-MKNV 99
I + R G A Q+FD+M + D + ++L A + G H+ LFD M NV
Sbjct: 148 IGGYVRVGMFDDALQLFDEMQSGFVLDELVIVTVLNACVNLGKLDHACELFDEMDGCGNV 207
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC-----------D 148
V+WN M++G + EA ++ M S + ++ + +
Sbjct: 208 VAWNVMISGHGKRGYHKEAVEFYRKMRMNGVISSRSTLASVLSAVAGLGDLGCGLLVHGE 267
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
A +L E +V + +I+ Y K + + A+ +FD + RN V W ++ +N
Sbjct: 268 AVKLGFE---SSVYVASSLINMYGKCEM---LCDAKKVFDVVCDRNVVMWNTILGVYAQN 321
Query: 209 GLYEEAWELFGRM------PQK---------------------------------NVVAS 229
G + ELF M P + N+ +
Sbjct: 322 GCLSDVMELFSEMMGCGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVN 381
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
A++ + K G + EA F++++ RD SWN ++ GY Q EA N+F +M R G+
Sbjct: 382 NALVDMYAKAGALKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVV 441
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
PD++ S+ +AC ++ +L+ G Q + L +K G D++L ++L+ MYSKCG I D+
Sbjct: 442 PDEVCMASILSACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKI 501
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
+ + +VS N +IA +A +A + +M +G++P ITF SL+ C + K+
Sbjct: 502 YSCMPEWSVVSMNALIAGYAIKDT-KEAINLLHEMQILGLKPSEITFASLIDCCKESPKV 560
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 201/436 (46%), Gaps = 25/436 (5%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM-- 94
VY A+ I + + + A++VFD + ++VV WN++L Y +G LF M
Sbjct: 277 VYVASSLINMYGKCEMLCDAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMG 336
Query: 95 --PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCD 148
+ +++++++ C D LD + + ++ N NA++ + K G L +
Sbjct: 337 CGNDPDEFTYSSILSSCACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKE 396
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMING 204
A++ F+ M + +S+ ++ GYV+ +E A +F M R +EV +++
Sbjct: 397 ARKQFERMKYRDNISWNAILVGYVQEEEE---TEAFNMFRRMNRHGVVPDEVCMASILSA 453
Query: 205 LVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
+ E + G + N+ A +++I + K G +++A ++ + + S
Sbjct: 454 CGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSM 513
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
N +I GYA +EA+NL +M G++P ++ F SL C + G Q + ++K
Sbjct: 514 NALIAGYAIKDT-KEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAILK 572
Query: 321 HGF--DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ-PDIVSWNTIIAAFAQHVLYYKA 377
+G S+ + +L+ MY + + + F + S IV W +I+ Q+ +A
Sbjct: 573 NGLLCGSEF-LGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQA 631
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
+ + +M + PD TF+++L C + + + +L+ H G + LVD
Sbjct: 632 LNLYREMRDNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHT-GFDLDELTSSALVD 690
Query: 438 VMSRAGQLQRACEIIR 453
+ ++ G ++ A ++
Sbjct: 691 MYAKCGDVKSAAKVFE 706
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
F + ++C L L+ G + +IK+GF+SD + L+ Y+KC + + F S
Sbjct: 75 FSTTLSSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLIHFYAKCKCLNSARTLFNSVS 134
Query: 355 Q---PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ D ++ +I + + ++ A FD+M + G D + +++L+ C GK+D
Sbjct: 135 RLDNLDTATFTALIGGYVRVGMFDDALQLFDEMQS-GFVLDELVIVTVLNACVNLGKLDH 193
Query: 412 SMNLFNLM 419
+ LF+ M
Sbjct: 194 ACELFDEM 201
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 201/416 (48%), Gaps = 51/416 (12%)
Query: 85 QHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKF- 143
+ +R +FD M ++++ +W A++ G V N DEA F M + + +++ +
Sbjct: 188 EDARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVC 247
Query: 144 GRLCDAQRLFKEMP-C-------PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
GRL + +L M C ++ +ID Y K G A +F M R+
Sbjct: 248 GRLMEGLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKC---GYPDEACLVFSYMVFRDI 304
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQ-------------------------------- 223
VSW+ +I G +NG+Y+E++EL+ RM
Sbjct: 305 VSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNF 364
Query: 224 -------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+VV +A++ + G + EA ++F+ + DI WN +I GY G + A
Sbjct: 365 VLKQGLLTDVVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSA 424
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
F ++ +P+ + VS+ C + L QG++ + + G ++SV N+L+ M
Sbjct: 425 FFTFREIWVAEHRPNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDM 484
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
YSKCG + F Q + +++NT+I+A H L K +++QM G++P+ +TF
Sbjct: 485 YSKCGFLELGVKVFNQMMVKNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTF 544
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+SLLS C AG +D L+N MV+DYGI P EHY+C+VD++ R G L A + I
Sbjct: 545 ISLLSACSHAGLVDRGWLLYNSMVNDYGIKPDMEHYSCMVDLIGRTGDLDGAYKFI 600
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 195/431 (45%), Gaps = 62/431 (14%)
Query: 74 MLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY 133
++ AY + G ++ F +P K+ ++WNA++ + ++ + ++ +M A
Sbjct: 76 LVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPD 135
Query: 134 NAMISGFIK---------FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
N +K GR L E N+ +ID +VK + + AR
Sbjct: 136 NYTYPLVLKACSSLQAIEIGRWVYHNILINEEKA-NLFVQCALIDMFVKCES---LEDAR 191
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA---------------- 228
+FD M R+ +WT +I G V NG ++EA LF +M + + A
Sbjct: 192 KVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLM 251
Query: 229 ------------------------STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
S A+I +CK G DEA +F + RDI SW+ +I
Sbjct: 252 EGLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLI 311
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
GY+QNG +E+ L+ +MV G+ ++++ ++ A L L QG++ + V+K G
Sbjct: 312 AGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLL 371
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+D+ V +ALV MY+ CGSI ++E F DI+ WN++IA + + A F ++
Sbjct: 372 TDVVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREI 431
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY----GIPPRSEHYACLVDVMS 440
RP+ IT +S+L +C + G + + +H Y G+ L+D+ S
Sbjct: 432 WVAEHRPNHITLVSVLPICTQIGALRQGKE-----IHCYATRSGLGLNISVGNSLIDMYS 486
Query: 441 RAGQLQRACEI 451
+ G L+ ++
Sbjct: 487 KCGFLELGVKV 497
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 160/341 (46%), Gaps = 36/341 (10%)
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVK 173
AF +F+ +P ++ ++NA++ I + + + M P+ +Y +++
Sbjct: 89 AFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPDNYTYPLVL----- 143
Query: 174 VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMI 233
+A + A+ V ++IN EE + N+ A+I
Sbjct: 144 --------KACSSLQAIEIGRWVYHNILIN--------EE---------KANLFVQCALI 178
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
F K +++A +F ++ RD+A+W +I G NG +EA+ LF +M G++ D +
Sbjct: 179 DMFVKCESLEDARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSV 238
Query: 294 IFVSLFTACASLAL-LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
I S+ C L L G + ++ GFDSDL V+NA++ MY KCG ++ L F
Sbjct: 239 IVASVLPVCGRLMEGLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSY 298
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
DIVSW+T+IA ++Q+ +Y ++ + +M+ +G+ + I ++L + +
Sbjct: 299 MVFRDIVSWSTLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQG 358
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ N ++ G+ + LVD+ + G ++ A I R
Sbjct: 359 KEMHNFVLKQ-GLLTDVVVGSALVDMYANCGSIKEAESIFR 398
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 177/412 (42%), Gaps = 24/412 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+Y +N I + + G A VF M +D+V+W++++ Y +G + S L+ M
Sbjct: 272 DLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQNGMYKESFELYVRMV 331
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE--------RNAASYNAMISGFIKFGRLC 147
+ + +V+ + + F M + +A++ + G +
Sbjct: 332 NMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVVGSALVDMYANCGSIK 391
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKE-GGGIARARALFDAMPRRNEVSWTVMINGLV 206
+A+ +F+ M +++ + +I GY V + R ++ A R N ++ ++
Sbjct: 392 EAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEHRPNHITLVSVLPICT 451
Query: 207 ENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+ G + E+ + N+ ++I + K G ++ +F Q+ ++ ++N
Sbjct: 452 QIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVKVFNQMMVKNTITYNT 511
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKH 321
MI+ +G GE+ L + QM GM+P+ + F+SL +AC+ L+D+G Y ++V +
Sbjct: 512 MISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSACSHAGLVDRGWLLYNSMVNDY 571
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQT--SQPDIVSWNTIIAAFAQHVLYYKARS 379
G D+ + +V + + G + D F T PD +++ A H
Sbjct: 572 GIKPDMEHYSCMVDLIGRTGDL-DGAYKFITTMPVTPDANVLGSLLGACRLH----NKVE 626
Query: 380 YFDQMIAVGV---RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
DQ+ A + + LLS +GK E M+ ++ D G+ +
Sbjct: 627 LADQLTAEHIFQLNTEDSGHYVLLSNLYASGKRWEDMSKVRSLIKDKGLEKK 678
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
+ ++ + G A+ F Q+ + +WN ++ + ++ + M+R G
Sbjct: 74 SHLVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFA 133
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
PD+ + + AC+SL ++ GR Y ++ + ++L V AL+ M+ KC S+ D+
Sbjct: 134 PDNYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKV 193
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
F + + D+ +W +I + + +A F +M G++ D + S+L VC G++
Sbjct: 194 FDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVC---GRL 250
Query: 410 DESMNL 415
E + L
Sbjct: 251 MEGLKL 256
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 197/394 (50%), Gaps = 47/394 (11%)
Query: 73 SMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ER 128
+L+ Y SG QH+ LF + WN M+ + ++ Y+ M E
Sbjct: 53 KLLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEP 112
Query: 129 NAASYNAMISGFIKFGRLCDAQRL----FKEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
+ +Y+ ++S ++ G + + ++L + C +V T +I+ Y + GG+ +AR
Sbjct: 113 DGFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYA---DCGGVEQAR 169
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDE 244
+FD M Q++VV+ +++ G+ K G D
Sbjct: 170 YVFD-------------------------------DMTQRSVVSWNSLLVGYVKCGDFDA 198
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A +F++I R++ SW MI GYAQNG+ EAL+LF QM R ++ D ++ V++ +ACA
Sbjct: 199 ARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACAE 258
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
L L GR + V + + + +NNAL+ MY+ CG I ++ F + S VSW I
Sbjct: 259 LGDLKLGRWIHWYVQERQRQASVRLNNALMHMYASCGIIDEAYRMFTKMSWKTTVSWTII 318
Query: 365 IAAFAQHVLYYKARSYFDQMIA-----VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
I AFA+ L +A F M++ G+RPDG TF++ L C AG ++E +F M
Sbjct: 319 IMAFAKQGLGKEALDLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESM 378
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+H + I + EHY C+VD++SRAG L A +I
Sbjct: 379 IHTWRISLQIEHYGCMVDLLSRAGCLDEAYRLIE 412
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 153/353 (43%), Gaps = 49/353 (13%)
Query: 36 DVYRANLNIAAFSRAGNITAARQ----VFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
D + + ++A R G + Q V K DV +++ Y G + +R +F
Sbjct: 113 DGFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVF 172
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
D M ++VVSWN+++ G V+ D A N F +P RN S+ MI+G+ + G+ +A
Sbjct: 173 DDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALS 232
Query: 152 LFKEMPCPNV-VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN-- 208
LF +M V + V++ E G + R + + R + + N L+
Sbjct: 233 LFGQMRRARVELDQVVLVAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNNALMHMYA 292
Query: 209 --GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
G+ +EA+ +F +M K V+ T +I F KQ
Sbjct: 293 SCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQ--------------------------- 325
Query: 267 YAQNGRGEEALNLFSQMV-----RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
G G+EAL+LF M+ ++G++PD F++ AC+ +++G + + +I H
Sbjct: 326 ----GLGKEALDLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMI-H 380
Query: 322 GFDSDLSVNN--ALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ L + + +V + S+ G + ++ L +P+ W ++ H
Sbjct: 381 TWRISLQIEHYGCMVDLLSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIH 433
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 136/309 (44%), Gaps = 49/309 (15%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
+V AK + S DV+ I ++ G + AR VFD M + VV+WNS+L Y G
Sbjct: 139 IVLAKGYCS-DVFVNTNLINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFD 197
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMIS--- 138
+R +F+ +P++NVVSW M+AG QN EA + F M E + A++S
Sbjct: 198 AARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARVELDQVVLVAVLSACA 257
Query: 139 --GFIKFGR-----LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
G +K GR + + QR +V ++ Y G I A +F M
Sbjct: 258 ELGDLKLGRWIHWYVQERQRQ------ASVRLNNALMHMYASC---GIIDEAYRMFTKMS 308
Query: 192 RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS------TAMITGFC---KQGKV 242
+ VSWT++I + GL +EA +LF M V S T I C G V
Sbjct: 309 WKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFV 368
Query: 243 DEAWTLFQQIRCRDIASWNI---------MITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+E +F+ + I +W I M+ ++ G +EA L M +P+D
Sbjct: 369 EEGCRIFESM----IHTWRISLQIEHYGCMVDLLSRAGCLDEAYRLIETM---PFKPNDA 421
Query: 294 IFVSLFTAC 302
I+ +L C
Sbjct: 422 IWGALLGGC 430
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%)
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
Q + VI +G ++ L++ Y+ G + + F Q P WN +I A+A +
Sbjct: 34 QIHTQVILNGLSHKHNIIAKLLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSI 93
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
+K+ Y++QM+ PDG T+ LLS C R G + E L +++
Sbjct: 94 TPWKSVQYYNQMVLNACEPDGFTYSFLLSACVRGGLVREGEQLHGIVL 141
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 194/394 (49%), Gaps = 50/394 (12%)
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQR----LFK 154
++++ C D L A M +R +A +Y+ +I + + + +R +F
Sbjct: 54 SSLLNHCYNRD-LPRAMQILDTMEKRGVFADAIAYSELIKCCLAHKAVREGKRVHNHIFS 112
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEA 214
P +++ YVK+ + A+ +FD MP RN VSWT MI+ L + A
Sbjct: 113 NGYRPKTFLINTLLNMYVKL---NLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRA 169
Query: 215 WELF------GRMP------------------------------QKNVVASTAMITGFCK 238
+L G MP + +V +A+I + K
Sbjct: 170 MKLLVFMIRDGVMPNMYTFSSVLRACERLCDLKQVHSGILKAGLESDVFVRSALIDAYSK 229
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
G++ EA +F+++ D WN +I +AQ+ G+EAL L+ M R G D S+
Sbjct: 230 LGELLEAVGVFREMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSV 289
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDI 358
AC +LL+ GRQ + V+K FD DL +NNAL+ MY KCGS+ D++ F + + D+
Sbjct: 290 LRACTGSSLLELGRQVHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFSRMAVKDV 347
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
+SW+T+I+ AQ+ +A + FD M G RP+ IT L +L C AG ++E F
Sbjct: 348 ISWSTMISGLAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFACSHAGLVNEGWGYFRS 407
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
M + YGI P EHY+CL+D++ RAG+L ++I
Sbjct: 408 MKNLYGIDPGREHYSCLLDLLGRAGKLDEMVKLI 441
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 171/328 (52%), Gaps = 16/328 (4%)
Query: 53 ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNVVSWNAMVAG 108
+ A+ VFDKMP ++VV+W +M++AY ++ + L M M N+ ++++++
Sbjct: 135 LEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMYTFSSVLRA 194
Query: 109 CVQ-NDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVM 167
C + D+ A E + +A+I + K G L +A +F+EM + V + +
Sbjct: 195 CERLCDLKQVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSI 254
Query: 168 IDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQ 223
I + + +G A AL+ +M R ++ + T ++ + L E ++ + +
Sbjct: 255 IAAFAQHSDGD---EALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLK 311
Query: 224 --KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
++++ + A++ +CK G +++A +F ++ +D+ SW+ MI+G AQNG EALNLF
Sbjct: 312 FDQDLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFD 371
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKC 340
M +G +P+ + + + AC+ L+++G + ++ +G D + L+ + +
Sbjct: 372 SMKVSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLDLLGRA 431
Query: 341 GSIVD-SELAFGQTSQPDIVSWNTIIAA 367
G + + +L T +PD+V+W T++ A
Sbjct: 432 GKLDEMVKLIHEMTCEPDVVTWRTLLDA 459
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 114/247 (46%), Gaps = 23/247 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ + I A+S+ G + A VF +M T D V WNS++ A+ + AL+ +M
Sbjct: 216 DVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQHSDGDEALALYKSMR 275
Query: 96 MK----NVVSWNAMVAGCVQNDMLD--EAFNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
+ + + +++ C + +L+ + +++ NA++ + K G L DA
Sbjct: 276 REGFPADQSTLTSVLRACTGSSLLELGRQVHVHVLKFDQDLILNNALLDMYCKCGSLEDA 335
Query: 150 QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRRNEVSWTVMINGL 205
+ +F M +V+S++ MI G + + G A LFD+M PR N ++ ++
Sbjct: 336 KFIFSRMAVKDVISWSTMISG---LAQNGFSVEALNLFDSMKVSGPRPNYITILGVLFAC 392
Query: 206 VENGLYEEAW-------ELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-DI 257
GL E W L+G P + + + G + GK+DE L ++ C D+
Sbjct: 393 SHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLDLLG--RAGKLDEMVKLIHEMTCEPDV 450
Query: 258 ASWNIMI 264
+W ++
Sbjct: 451 VTWRTLL 457
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM- 94
D+ N + + + G++ A+ +F +M KDV++W++M++ +GF + LFD+M
Sbjct: 315 DLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMK 374
Query: 95 ---PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGRL 146
P N ++ ++ C +++E + YF +M + Y+ ++ + G+L
Sbjct: 375 VSGPRPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLDLLGRAGKL 434
Query: 147 CDAQRLFKEMPC-PNVVSYTVMIDG 170
+ +L EM C P+VV++ ++D
Sbjct: 435 DEMVKLIHEMTCEPDVVTWRTLLDA 459
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
A+ + M + G+ D + + L C + + +G++ + + +G+ + N L+
Sbjct: 68 AMQILDTMEKRGVFADAIAYSELIKCCLAHKAVREGKRVHNHIFSNGYRPKTFLINTLLN 127
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
MY K + ++++ F + + ++VSW T+I+A++ L +A MI GV P+ T
Sbjct: 128 MYVKLNLLEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMPNMYT 187
Query: 396 FLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F S+L C R + + + + G+ + L+D S+ G+L A + R
Sbjct: 188 FSSVLRACERLCDLKQ----VHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFR 241
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 210/410 (51%), Gaps = 32/410 (7%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMP-MKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
+ V +S++ Y G + +F +M +K+ V+WN M++ VQ M ++A M
Sbjct: 347 NYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWM 406
Query: 126 PERNAASYNAM-ISGF---------IKFGR----LCDAQRLFKEMPCPNVVSYTVMIDGY 171
E ++ + +S +K G+ C + +M + V +D Y
Sbjct: 407 REEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGV-----LDMY 461
Query: 172 VKVKEGGGIARARALFD-AMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NV 226
K G + AR +F A +++ V W M+ E GL EA +LF +M + NV
Sbjct: 462 AKC---GIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNV 518
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQ 282
V+ ++I GF + G+V EA +F +++ ++ +W MI+G AQNG G EA +F Q
Sbjct: 519 VSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQ 578
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M GM+P+ + S +AC ++ALL+ GR + V+++ L + +++ MY+KCG+
Sbjct: 579 MQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGN 638
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ D++ F S ++ +N +I+A+A H +A + F +++ G+ PD ITF S+LS
Sbjct: 639 LDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSA 698
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C + E + LF MV + + P +HY CLV +++ GQL A II
Sbjct: 699 CSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRII 748
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 174/388 (44%), Gaps = 46/388 (11%)
Query: 47 FSRAGNITAARQVFD-KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVS 101
+++ G + AR VF KD+V WN+ML A G + LF M M+ NVVS
Sbjct: 461 YAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVS 520
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMP 157
WN+++ G +N + EA + F+ M N ++ MISG + G +A R+F++M
Sbjct: 521 WNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQM- 579
Query: 158 CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL 217
+G G+ R N +S T ++ L +
Sbjct: 580 ------------------QGAGM-----------RPNSISITSALSACTNMALLNYGRSI 610
Query: 218 FGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
G + + ++ +T++I + K G +D+A +F +++ +N MI+ YA +G+
Sbjct: 611 HGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKS 670
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNA 332
EAL LF ++V+ G+ PD + F S+ +AC+ LL +G + + +V +
Sbjct: 671 AEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGC 730
Query: 333 LVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRP 391
LV + + G + ++ + S PD +++AA Q+ A ++ V
Sbjct: 731 LVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNN 790
Query: 392 DGITFLSLLSVCCRAGKIDESMNLFNLM 419
G +++L +V GK DE N+ M
Sbjct: 791 PG-NYVALSNVYAALGKWDEVSNIRGFM 817
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 182/404 (45%), Gaps = 63/404 (15%)
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIK---------FGRLC 147
+N+ S+ A+V +N + EA + M E+ N ++ +K FGR
Sbjct: 170 QNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFGRGI 229
Query: 148 DA--QRLFKEMP-CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP--RRNEVSWTVMI 202
++ E C V T ++D Y K G + A +FD MP +RN+V W MI
Sbjct: 230 HGFVVKMGNEFDGC--VYVATSLVDMYGKC---GVLEDAEKVFDEMPNRKRNDVVWNSMI 284
Query: 203 NGLVENGLYEEAWELFGRM-------PQK------------------------------- 224
G V+NG+ EA LF +M P +
Sbjct: 285 VGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGF 344
Query: 225 --NVVASTAMITGFCKQGKVDEAWTLFQQIRC-RDIASWNIMITGYAQNGRGEEALNLFS 281
N V ++++ + K G ++E +F+ + +D +WN+MI+ Y Q G E+AL +
Sbjct: 345 ELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCH 404
Query: 282 QM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
M ++ D + SL A + G++ + I++ F SD++V + ++ MY+KC
Sbjct: 405 WMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKC 464
Query: 341 GSIVDSELAFG-QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSL 399
G + + F + DIV WNT++AA A+ L +A F QM V P+ +++ SL
Sbjct: 465 GIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSL 524
Query: 400 LSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
+ R G++ E+ ++F+ M G+ P + ++ +++ G
Sbjct: 525 IFGFFRNGQVVEAQDMFSEM-QLSGVTPNLITWTTMISGLAQNG 567
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 195/431 (45%), Gaps = 71/431 (16%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTK--DVVTWNSMLTAYWHSGFPQHSRALFDAM 94
VY A + + + G + A +VFD+MP + + V WNSM+ Y +G + LF+ M
Sbjct: 244 VYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKM 303
Query: 95 PMK-----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
+ + VS + + C + ++E A + ++ GF
Sbjct: 304 RFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALV----------ILMGF--------- 344
Query: 150 QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP-RRNEVSWTVMINGLVEN 208
E+ N V + +++ Y KV G I +F +M ++EV+W +MI+ V+
Sbjct: 345 -----EL---NYVLGSSIMNFYSKV---GLIEEVELVFRSMAVLKDEVTWNLMISSYVQF 393
Query: 209 GLYEEAWELFGRMPQK-----NVVASTAMI-----TGFCKQGKVDEAWTLFQQIRCRDIA 258
G++E+A E+ M ++ + V ++++ T K GK + + + D+A
Sbjct: 394 GMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFY-SDMA 452
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
+ ++ YA+ G + A +F G + D +++ ++ ACA L + + + +
Sbjct: 453 VLSGVLDMYAKCGIMDCARGVFH---FAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQM 509
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAAFAQHVLY 374
++ N+L+ + + G +V+++ F + P++++W T+I+ AQ+ L
Sbjct: 510 QMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLG 569
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
Y+A F QM G+RP+ I+ S LS C N+ + +YG RS H
Sbjct: 570 YEASRVFQQMQGAGMRPNSISITSALSACT------------NMALLNYG---RSIHGYV 614
Query: 435 LVDVMSRAGQL 445
+ + MS + Q+
Sbjct: 615 MRNFMSFSLQI 625
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
++ +++ S+ ++ A+NG +EAL + +M+ G PD+ + + AC L + G
Sbjct: 167 VKNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKACGGLRWIGFG 226
Query: 312 RQTYALVIKHG--FDSDLSVNNALVTMYSKCGSIVDSELAFGQ--TSQPDIVSWNTIIAA 367
R + V+K G FD + V +LV MY KCG + D+E F + + + V WN++I
Sbjct: 227 RGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVG 286
Query: 368 FAQHVLYYKARSYFDQM-IAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ Q+ + +A F++M GV P ++ S C ++E
Sbjct: 287 YVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEE 331
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 169/329 (51%), Gaps = 45/329 (13%)
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK-- 224
M+ Y + E G AR +FD + ++ VSW +++G + G EA E+FGR+ ++
Sbjct: 158 MVTMYFRCGENG---VARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESG 214
Query: 225 --------------------------------------NVVASTAMITGFCKQGKVDEAW 246
N +A+I+ + K G++ +
Sbjct: 215 FEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSR 274
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
+F + RD +WN I+ YAQNG +EA++LF M G+ P+ + ++ +ACAS+
Sbjct: 275 RIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIG 334
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
LD G+Q G D+ V AL+ MY+KCGS+ ++ F + + SWN +I+
Sbjct: 335 ALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMIS 394
Query: 367 AFAQHVLYYKARSYFDQMIAVG--VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
A A H +A S F++M G RP+ ITF+SLLS C AG +DE LF++M +G
Sbjct: 395 ALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFG 454
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ P+ EHY+C+VD++SRAG L A ++I
Sbjct: 455 LVPKIEHYSCMVDLLSRAGHLYEAWDVIE 483
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 183/395 (46%), Gaps = 57/395 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + N + + R G AR+VFD++ KD+V+WNS+L+ Y GF + + +F +
Sbjct: 151 DHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLR 210
Query: 96 MK-----NVVSWNAMVAGCVQNDMLD-----EAFNYFAAMPERNAASYNAMISGFIKFGR 145
+ + +S +++ C + L+ E F M + N+ +A+IS + K G
Sbjct: 211 EESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGM-KVNSYIGSALISMYSKCGE 269
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVM 201
L ++R+F MP + +++ I Y + G A +LF +M N+V+ T +
Sbjct: 270 LVSSRRIFDGMPSRDFITWNAAISAYA---QNGMADEAISLFHSMKENGVDPNKVTLTAV 326
Query: 202 INGLVENGLYEEAWEL----FGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
++ G + ++ R Q ++ +TA+I + K G ++ A +F + ++
Sbjct: 327 LSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKND 386
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTG--MQPDDLIFVSLFTACASLALLDQGRQTY 315
ASWN MI+ A +G+ +EAL+LF +M G +P+D+ FVSL +AC L+D+G +
Sbjct: 387 ASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYR-- 444
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
L M S +V P I ++ ++ ++ Y
Sbjct: 445 -----------------LFDMMSTLFGLV-----------PKIEHYSCMVDLLSRAGHLY 476
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
+A ++M +PD +T +L S C R +D
Sbjct: 477 EAWDVIEKMPE---KPDNVTLGALHSACQRKKNVD 508
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 89/171 (52%), Gaps = 2/171 (1%)
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
L+L+ QM + P++ F +F ACA+L + R + V K G D+D N++VT
Sbjct: 101 TLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVT 160
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM-IAVGVRPDGI 394
MY +CG + F + ++ D+VSWN++++ +A+ +A F ++ G PD +
Sbjct: 161 MYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEM 220
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
+ +S+L C G ++ + +V + G+ S + L+ + S+ G+L
Sbjct: 221 SLVSVLGACGELGDLELGRWVEGFVV-ERGMKVNSYIGSALISMYSKCGEL 270
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+D++ A I +++ G++ +A++VF+ MP K+ +WN+M++A G + + +LF+ M
Sbjct: 353 HDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERM 412
Query: 95 PMK------NVVSWNAMVAGCVQNDMLDEAFNYFAAMPE-----RNAASYNAMISGFIKF 143
+ N +++ ++++ CV ++DE + F M Y+ M+ +
Sbjct: 413 SDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRA 472
Query: 144 GRLCDAQRLFKEMP 157
G L +A + ++MP
Sbjct: 473 GHLYEAWDVIEKMP 486
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/436 (28%), Positives = 209/436 (47%), Gaps = 55/436 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
DV N+++ Y + G + + +F +M K+ VSWN +++G VQNDM +A N+F M
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ 344
Query: 127 ER----NAASYNAMISGFIKFGRLCDAQRL----FKEMPCPNVVSYTVMIDGYVK---VK 175
+ + S MI+ + L + K N+ +ID Y K VK
Sbjct: 345 DSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVK 404
Query: 176 EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----------- 224
G + F+ MP ++ +SWT +I G +N + +A L ++ +
Sbjct: 405 YMG------SAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGS 458
Query: 225 ---------------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
+++ A++ + + VD A +F+ I +DI
Sbjct: 459 ILLACSGLKSEKLIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSKDI 518
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SW MIT NG EAL LF+ ++ T ++PD + VS+ A A+L+ L +G++ +
Sbjct: 519 VSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGF 578
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+I+ GF + + N+LV MY++CG++ ++ F Q D++ W ++I A H A
Sbjct: 579 LIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDA 638
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
F +M V PD ITFL+LL C +G + E F +M ++Y + P EHYACLVD
Sbjct: 639 IDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVD 698
Query: 438 VMSRAGQLQRACEIIR 453
+++R+ L+ A +R
Sbjct: 699 LLARSNSLEEAYHFVR 714
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 161/365 (44%), Gaps = 56/365 (15%)
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMIS--GFIKF 143
+FD M + + +WNAM+ CV EA + M +A ++ ++ G K
Sbjct: 104 VFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKE 163
Query: 144 GRL-CDAQRLFKEMPCPN---VVSYTVMIDGYVKVKEGGGIARARALFDA--MPRRNEVS 197
RL C+ + + C V +I Y K + GG AR LFD+ M + + VS
Sbjct: 164 RRLGCEIHGV--AVKCGYGGFVFVCNALIAMYAKCGDLGG---ARVLFDSGLMEKDDPVS 218
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQ---------------------------------- 223
W +I+ V G EA LF RM +
Sbjct: 219 WNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVIL 278
Query: 224 -----KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
+V S A+I + G++++A +F+ + +D SWN +++G QN +A+N
Sbjct: 279 KSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAIN 338
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
F M +G +PD + +++ A A L G + +A IKHG DS++ + N+L+ MY
Sbjct: 339 HFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYG 398
Query: 339 KCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
KC + AF + D++SW TIIA +AQ+ + A + ++ + D + S
Sbjct: 399 KCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGS 458
Query: 399 LLSVC 403
+L C
Sbjct: 459 ILLAC 463
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 199/432 (46%), Gaps = 27/432 (6%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDK--MPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
V+ N IA +++ G++ AR +FD M D V+WNS+++A+ G + +LF M
Sbjct: 183 VFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRM 242
Query: 95 P----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIKFGRL 146
N ++ + + C + A + + N + NA+I+ + G++
Sbjct: 243 QEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQM 302
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVK-EGGGIARARALFDAMPRRNEVSWTVMI--N 203
DA+R+FK M + VS+ ++ G V+ I + + D+ + ++VS MI +
Sbjct: 303 EDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAAS 362
Query: 204 GLVEN---GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
G N G+ A+ + + N+ ++I + K V + F+ + +D+ SW
Sbjct: 363 GRSANLLAGMEVHAYAIKHGI-DSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISW 421
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+I GYAQN +ALNL ++ M D ++ S+ AC+ L ++ + V+K
Sbjct: 422 TTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVLK 481
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
G +D+ + NA+V +Y + + + F + DIVSW ++I + L +A
Sbjct: 482 GGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALEL 540
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD----YGIPPRSEHYACLV 436
F+ +I + PD IT +S+L + + + ++ G+ S LV
Sbjct: 541 FNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANS-----LV 595
Query: 437 DVMSRAGQLQRA 448
D+ +R G ++ A
Sbjct: 596 DMYARCGTMENA 607
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 89/181 (49%), Gaps = 2/181 (1%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+V T + + K G +A +F ++ R I +WN MI GR EA+ L+ +M
Sbjct: 81 SVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMR 140
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
G+ D F + AC + G + + + +K G+ + V NAL+ MY+KCG +
Sbjct: 141 VLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLG 200
Query: 345 DSELAF--GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ + F G + D VSWN+II+A +A S F +M VGV + TF+S L
Sbjct: 201 GARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQA 260
Query: 403 C 403
C
Sbjct: 261 C 261
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 302 CASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
CAS L QG+Q +A +K + + ++ V MY KCGS D+ F + S+ I +
Sbjct: 56 CASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFT 115
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
WN +I A Y +A + +M +GV D TF +L C
Sbjct: 116 WNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKAC 158
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 220/434 (50%), Gaps = 28/434 (6%)
Query: 44 IAAFSRAGNITAARQVFDKMP--TKDVVTWNSMLTAYWHSGFPQHS----RALFDAMPMK 97
I+ +SR AR VFD M ++++ +WNS++ +Y G + R + +K
Sbjct: 297 ISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIK 356
Query: 98 -NVVSWNAMVAGCVQNDMLDEAFNYFAAM------PERNA--ASYNAMIS-GFIKFGRLC 147
++++WN++++G + + F ++ P+ + ++ A+I GF K G+
Sbjct: 357 PDIITWNSILSGYLLRGSFEMVLTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEI 416
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
+ + +V T ++D YVK + +A+A+ +N +W +I+G
Sbjct: 417 HGYIMRSNLN-YDVYVCTSLVDMYVK---NDCLEKAQAVLHRAKNKNVCAWNSLISGYSF 472
Query: 208 NGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR----DIAS 259
G + EA +L +M ++ + V +++G+ QG++DEA T+ +I+ ++ S
Sbjct: 473 KGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVS 532
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
W +I+G +QN + +AL +FSQM ++P+ SL ACA +LL +G + + +
Sbjct: 533 WTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELHCFSM 592
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
K GF D+ V AL+ MYS+ G + + F + + + WN ++ +A H +
Sbjct: 593 KLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMI 652
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
+D+M +RPD ITF +LLS C +G +DE F+ M DY I P EHY C+VD++
Sbjct: 653 LYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLL 712
Query: 440 SRAGQLQRACEIIR 453
++G L A I
Sbjct: 713 GKSGFLDEASHFIE 726
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 155/349 (44%), Gaps = 38/349 (10%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
+YDVY + + + + A+ V + K+V WNS+++ Y G + L +
Sbjct: 426 NYDVYVCTSLVDMYVKNDCLEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQ 485
Query: 94 MPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGR 145
M + ++V+WN +V+G +DEA + N S+ A+ISG + +
Sbjct: 486 MVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEK 545
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
DA ++F +M NV + I + G + + + E+ M G
Sbjct: 546 YMDALKIFSQMQAENVKPNSTTICSLLCACAGPSL---------LKKGEELHCFSMKLGF 596
Query: 206 VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
V+ ++ +TA+I + + GK+ A+ +F +I+ + + WN M+
Sbjct: 597 VD-----------------DIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMM 639
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFD 324
GYA + GEE + L+ +M ++PD + F +L +AC + L+D+G + + ++ +
Sbjct: 640 GYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIV 699
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTS--QPDIVSWNTIIAAFAQH 371
+ +V + K G +D F +T +PD W ++A+ H
Sbjct: 700 PTIEHYCCMVDLLGKSG-FLDEASHFIETMPIKPDASIWGALLASCKIH 747
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 4/208 (1%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+V S A+I + K +D+A +F + ++ WN ++ ++ R + AL LF M
Sbjct: 188 DVHLSCALINFYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQ 247
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
R + V + AC L L++G+Q + ++ G S+ V N++++MYS+
Sbjct: 248 RDSAKATVGTTVKMLQACGKLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFK 307
Query: 345 DSELAFG--QTSQPDIVSWNTIIAAFA-QHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+ F + ++ SWN++I ++A L + + M G++PD IT+ S+LS
Sbjct: 308 LARAVFDSMEDHSRNLSSWNSVIFSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILS 367
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRS 429
G + + F + H G P S
Sbjct: 368 GYLLRGSFEMVLTSFRSL-HSLGFKPDS 394
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+Y A I +S AG + A VF+K+ K + WN M+ Y + L+D M
Sbjct: 599 DIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMR 658
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRL 146
+++ +++ A+++ C + ++DE + YF +M E Y M+ K G L
Sbjct: 659 ERHIRPDAITFTALLSACKNSGLVDEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFL 718
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSWTVMIN 203
+A + MP S + K+ + +A AR LF P N ++ +M+N
Sbjct: 719 DEASHFIETMPIKPDASIWGALLASCKIHKNIKLAEIAARKLFKMEP-NNSANYVLMMN 776
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Query: 255 RDIASWNIMITGYAQ-NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
R+ WN + + G E L +F++M G++ D F + C +L G +
Sbjct: 116 RNYLLWNSFLEEFESFGGDPFEILVVFNEMYSKGVEFDSKAFTFVLKICLALREFLFGLE 175
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+A +IK GF D+ ++ AL+ Y KC SI + F +T + WNTI+ A +
Sbjct: 176 VHACLIKKGFHVDVHLSCALINFYGKCWSIDKANQVFHETPYKEDFLWNTIVMANLRSER 235
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
+ A F M + T + +L C + ++E L
Sbjct: 236 WKNALELFCDMQRDSAKATVGTTVKMLQACGKLKALNEGKQL 277
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 218/448 (48%), Gaps = 72/448 (16%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEA------FN 120
D + NS+++ Y + +R +FD MP ++ ++WN+M+ +QN +L EA F
Sbjct: 100 DPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFY 159
Query: 121 YFAAMPERNAASYNAMISGFIKFGRLCD-AQRLFKEMPCPNVVSYTVMIDGYVKVKEG-- 177
+ +P+ + +M+S GR D R+ ++ + V++DG ++++
Sbjct: 160 FLGFLPKPELLA--SMVS---MCGREMDLGWRIGRQ------IHGLVVVDGRIRIQHSVF 208
Query: 178 ------------GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKN 225
G AR++FD M +NEVSWT +I+G N Y+ A + M +
Sbjct: 209 LSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEG 268
Query: 226 V----VASTAMIT-----GFCKQGK-------------------------------VDEA 245
V V A++ GF K GK + A
Sbjct: 269 VSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLA 328
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
+F+ RD+ W+ +I YA+ G ++AL LF++M +P+ + +++ +AC +L
Sbjct: 329 ERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNL 388
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
+ G + ++K G + V NAL+ MY+KCGS+ DS F + D V+WN++I
Sbjct: 389 SSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMI 448
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+A+ H +A +F +M GV+ D +TFL++LS C AG + E LF + D I
Sbjct: 449 SAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEI 508
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEIIR 453
P EHYACL+D+ R+G+L+ A EI+R
Sbjct: 509 PITIEHYACLIDLHGRSGKLEDALEILR 536
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 163/378 (43%), Gaps = 61/378 (16%)
Query: 78 YWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASY 133
Y+ G +R++FD M +KN VSW A+++GC N D A + M N +
Sbjct: 217 YFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTL 276
Query: 134 NAMIS-----GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFD 188
A+++ GF+K+G+ + + S ++ Y+ + G + A +F+
Sbjct: 277 IALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALI---YLYCECGQSLHLAERIFE 333
Query: 189 AMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------------------ 224
R+ V W+ +I G ++A +LF +M +
Sbjct: 334 GSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKH 393
Query: 225 ---------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQ 269
++ A+I + K G +D++ +F ++ RD +WN MI+ Y
Sbjct: 394 GGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGL 453
Query: 270 NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSV 329
+G GE+AL F +M G++ D + F+++ +AC L+ +G+Q + V D ++ +
Sbjct: 454 HGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQV---NADCEIPI 510
Query: 330 N----NALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
L+ ++ + G + D+ E+ +P W++++++ H A S Q+
Sbjct: 511 TIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQL 570
Query: 385 IAVGVRPDGITFLSLLSV 402
I P+ +LLS+
Sbjct: 571 IR--SEPNNAASYTLLSM 586
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 12/143 (8%)
Query: 24 FLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGF 83
++L F FS ++ N I +++ G++ +R++F +MP++D VTWNSM++AY G+
Sbjct: 400 YILKFGIGFS---IFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGY 456
Query: 84 PQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYN 134
+ + F M + V V++ A+++ C ++ E F + Y
Sbjct: 457 GEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYA 516
Query: 135 AMISGFIKFGRLCDAQRLFKEMP 157
+I + G+L DA + + MP
Sbjct: 517 CLIDLHGRSGKLEDALEILRTMP 539
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFV--SLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
G + L F+Q+ + + + FV S+ AC+ G Q + L G +D
Sbjct: 43 GLYHQTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPI 102
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
V+N++++MY+K I + F D ++WN++I A+ Q+ L +A +G
Sbjct: 103 VSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLG 162
Query: 389 VRPDGITFLSLLSVCCR 405
P S++S+C R
Sbjct: 163 FLPKPELLASMVSMCGR 179
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 192 bits (487), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 203/412 (49%), Gaps = 44/412 (10%)
Query: 59 VFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEA 118
V + +P N+++ Y G + + +++ M K+VV+WNAMV G QN ++A
Sbjct: 33 VVNILPVSGFFVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDA 92
Query: 119 FNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEM---PC-PNVVSYTVMIDG 170
+ F M E + +++++ISG+ + G C+A +F++M C PNVV+ ++ G
Sbjct: 93 LSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSG 152
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKN--VVA 228
V G + + E Y + L G N +
Sbjct: 153 CASV---GALLHGK----------------------ETHCYSIKFILKGEHNDDNDDLAG 187
Query: 229 STAMITGFCKQGKVDEAWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLFSQMVR- 285
A+I + K ++ A +F +I + RD+ +W +MI GYAQ G AL LFS+M +
Sbjct: 188 INALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKF 247
Query: 286 -TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG-FDSD-LSVNNALVTMYSKCGS 342
+ P+D + ACA LA L G+Q +A V++ DSD L V N L+ MYSK G
Sbjct: 248 DNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGD 307
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ +++ F S+ + +SW +++ + H A FD+M + DGITFL +L
Sbjct: 308 VDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYA 367
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
C +G +D ++LF M D+ + P EHYAC+ D+ RAG+L CE RL
Sbjct: 368 CSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRL---CEATRL 416
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 173/405 (42%), Gaps = 79/405 (19%)
Query: 38 YRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK 97
+ N + +++ G + A +V+++M KDVVTWN+M+T Y +G + + +LF M +
Sbjct: 43 FVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREE 102
Query: 98 ----NVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGRLCDA 149
+VV+W+++++G Q EA + F M N + +++SG G L
Sbjct: 103 RIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHG 162
Query: 150 QRLFKEMPC---------------PNVVSYTVMIDGYVKVKEGGGIARARALFDAM-PR- 192
KE C ++ +ID Y K K + ARA+FD + P+
Sbjct: 163 ----KETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKS---LEVARAMFDEICPKD 215
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRM--------PQKNVVASTAM------------ 232
R+ V+WTVMI G + G A +LF M P ++ M
Sbjct: 216 RDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGK 275
Query: 233 -----------------------ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQ 269
I + K G VD A +F + R+ SW ++TGY
Sbjct: 276 QIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGM 335
Query: 270 NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSV 329
+G E+A +F +M + + D + F+ + AC+ ++D+G + + K F D V
Sbjct: 336 HGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKD-FVVDPGV 394
Query: 330 NN--ALVTMYSKCGSIVD-SELAFGQTSQPDIVSWNTIIAAFAQH 371
+ + ++ + G + + + L + +P V W +++A H
Sbjct: 395 EHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTH 439
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
+ H ++ S ++ AN I +S++G++ A+ VFD M ++ ++W S+LT Y
Sbjct: 274 GKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGY 333
Query: 79 WHSGFPQHSRALFDAMPMKNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPER-----N 129
G + + +FD M + +V ++ ++ C + M+D + F M +
Sbjct: 334 GMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPG 393
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEM---PCPNV 161
Y M F + GRLC+A RL +M P P V
Sbjct: 394 VEHYACMADLFGRAGRLCEATRLINDMSMEPTPVV 428
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 215/430 (50%), Gaps = 51/430 (11%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER--- 128
+ ++ Y +R LFD MP +++V+WN+M++ V EA ++ M
Sbjct: 39 HKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVL 98
Query: 129 -NAASYNAMISGFIKFGRLCDAQR-----LFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR 182
+A +++A+ F + G + Q+ + + T ++D Y K G +
Sbjct: 99 PDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKF---GKMKD 155
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------PQKNVVAS------- 229
AR +FD + ++ V +T +I G ++GL EA E+F M P + +AS
Sbjct: 156 ARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGN 215
Query: 230 --------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
T+++T + K V+++ +F + +W
Sbjct: 216 LGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSF 275
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I G QNGR E AL++F +M+R + P+ S+ AC+SLA+L+ G Q +A+ +K G
Sbjct: 276 IVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGV 335
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
D + V+ AL+ +Y KCG++ + F ++ DIVS NT+I A+AQ+ ++A F++
Sbjct: 336 DGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFER 395
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
+ +G+ P+ +TF+S+L C AG ++E +F+L+ +++ I +HY C++D++ RA
Sbjct: 396 LKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAK 455
Query: 444 QLQRACEIIR 453
+ + A +I
Sbjct: 456 RFEEATMLIE 465
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 184/401 (45%), Gaps = 21/401 (5%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
F D + A + +++ G + AR VFD++ KDVV + +++ Y G + +F
Sbjct: 132 FEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVF 191
Query: 92 DAMP----MKNVVSWNAMVAGCVQ-NDMLDEAFNYFAAMP---ERNAASYNAMISGFIKF 143
+ M N + +++ C D+++ + + E AS ++++ + K
Sbjct: 192 EDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKC 251
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNEVSWT 199
+ D+ ++F + + V++T I G V + G A ++F M R N + +
Sbjct: 252 NMVEDSIKVFNSLAYASHVTWTSFIVGLV---QNGREEVALSMFREMMRCSISPNHFTLS 308
Query: 200 VMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
+++ + E ++ + N A+I + K G V++A ++F +
Sbjct: 309 SILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTEL 368
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
DI S N MI YAQNG G EAL LF ++ + G++P+ + F+S+ AC + L+++G Q +
Sbjct: 369 DIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIF 428
Query: 316 ALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+L+ H + ++ + + ++ + + PD++ W T++ A H
Sbjct: 429 SLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEV 488
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
A + +M+ R DG T + L ++ AGK D + +
Sbjct: 489 EMAEKFMKKMLDQAPR-DGGTHILLTNIYASAGKWDNVIEM 528
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/467 (27%), Positives = 210/467 (44%), Gaps = 72/467 (15%)
Query: 28 FAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHS 87
F H +S N I+ ++ G I A VF ++PTKD+++W +M+T Y G+ +
Sbjct: 197 FGHHLTS-----QNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEA 251
Query: 88 RALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF-IKFGRL 146
LF + + N + G V F+A Y + G +KFG
Sbjct: 252 LYLFRDLLRQGTYQPNEFIFGSV-----------FSACSSLLELEYGKQVHGMCVKFG-- 298
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
+R NV + + D Y K G + A+ F + + VSW +I
Sbjct: 299 --LRR--------NVFAGCSLCDMYAKF---GFLPSAKMAFCQIKNPDIVSWNAIIAAFA 345
Query: 207 ENGLYEEAWELFGRMPQ---------------------------------------KNVV 227
+NG EA + F +M K +
Sbjct: 346 DNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEIT 405
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQI-RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT 286
+++T + K + +A +F+ I R ++ SWN +++ Q + E L+ +M +
Sbjct: 406 VCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFS 465
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
G +PD + +L CA L L G Q + IK G D+SV N L+ MY+KCGS+ +
Sbjct: 466 GNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHA 525
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F T DIVSW+++I +AQ L ++A + F M +GV+P+ +T+L LS C
Sbjct: 526 RDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHI 585
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G ++E L+ M ++GIPP EH++C+VD+++RAG L A I+
Sbjct: 586 GLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQ 632
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 213/433 (49%), Gaps = 30/433 (6%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP----M 96
N I + + G++ AR+VFD M +VV+W SM++ Y +G + ++ M
Sbjct: 104 NHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQF 163
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCDAQRL 152
+ +++ +++ C +D A + + + S NA+IS + FG++ A +
Sbjct: 164 PDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNV 223
Query: 153 FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
F +P +++S+ MI GY+++ G A LF + R+ I G V +
Sbjct: 224 FTRIPTKDLISWGTMITGYIQL---GYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSS 280
Query: 213 EAWELFGRMP---------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
+G+ ++NV A ++ + K G + A F QI+ DI SWN +
Sbjct: 281 LLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAI 340
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I +A NG EA++ F QM+ G+ PD + ++SL C S L+QGRQ ++ ++K GF
Sbjct: 341 IAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGF 400
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ-PDIVSWNTIIAAFAQHVLYYKARSYFD 382
D +++V N+L+TMY+KC + D+ F S+ ++VSWN I++A Q + +
Sbjct: 401 DKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYK 460
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR--SEHYAC--LVDV 438
+M G +PD IT +LL C S+ + N VH Y I + C L+D+
Sbjct: 461 EMHFSGNKPDSITITTLLGTCAEL----TSLGVGN-QVHCYSIKSGLILDVSVCNGLIDM 515
Query: 439 MSRAGQLQRACEI 451
++ G L+ A ++
Sbjct: 516 YAKCGSLKHARDV 528
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 98/182 (53%), Gaps = 1/182 (0%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
Q +++ MI + K G + +A +F ++ ++ SW MI+GY+QNG+ +A+ ++ Q
Sbjct: 97 QPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQ 156
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M R+G PD L F S+ AC +D GRQ +A VIK F L+ NAL++MY+ G
Sbjct: 157 MTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQ 216
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV-RPDGITFLSLLS 401
I + F + D++SW T+I + Q +A F ++ G +P+ F S+ S
Sbjct: 217 IEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFS 276
Query: 402 VC 403
C
Sbjct: 277 AC 278
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 4/180 (2%)
Query: 274 EEALNLFS-QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
+EAL F + + + + SL ACA+ LD ++ + V+K + + + N
Sbjct: 46 KEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNH 105
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
++ MY KCGS+ D+ F P++VSW ++I+ ++Q+ A + QM G PD
Sbjct: 106 MINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPD 165
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLMVHD-YGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+TF S++ C AG ID L ++ +G S++ L+ + + GQ++ A +
Sbjct: 166 QLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQN--ALISMYTNFGQIEHASNV 223
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/435 (26%), Positives = 219/435 (50%), Gaps = 19/435 (4%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV + + +++ ++++ R++FD M KD W+SM++ Y + + + F M
Sbjct: 242 DVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMC 301
Query: 96 MKNVV----SWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGRLC 147
+ V ++ + CV+ + L+ M + + + +++ + FG L
Sbjct: 302 RQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELG 361
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
D ++LF + ++V++ MI + + G G R LF + R + V
Sbjct: 362 DVEKLFSRIDDKDIVAWNSMI--LAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVL 419
Query: 208 NGLYEEAWELFGRMPQKNVVAST---------AMITGFCKQGKVDEAWTLFQQIRCRDIA 258
+++ GR +V S+ A++ + + ++D+A+ F I +D +
Sbjct: 420 KSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDS 479
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SW+ +I QN +AL L +M+ G+ +AC+ L + +G+Q +
Sbjct: 480 SWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFA 539
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
IK G+ D+ + ++++ MY+KCG+I +SE F + +P+ V++N II+ +A H +A
Sbjct: 540 IKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAI 599
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
++ GV P+ +TFL+L+S C AG ++E+ +LF LM+ Y I P+SEHY+CLVD
Sbjct: 600 EVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDA 659
Query: 439 MSRAGQLQRACEIIR 453
RAG+L+ A +I++
Sbjct: 660 YGRAGRLEEAYQIVQ 674
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 127/575 (22%), Positives = 230/575 (40%), Gaps = 140/575 (24%)
Query: 1 MLSSIIVSIALKPTPS--STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQ 58
+L ++S+A K P + H L+ ++ S + AN ++ +S++ N A +
Sbjct: 6 LLEPFLLSLAKKSNPIILTQCNQIHAQLIITQYISQ--THLANTLLSFYSKSSNFHYAHK 63
Query: 59 VFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDM 114
+FDKMP ++VVTW ++++++ G + +F+ M + N ++ ++ C ++
Sbjct: 64 LFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNREL 123
Query: 115 ------------------------------------LDEAFNYFAAMPERNAASYNAMIS 138
L +A F + ER+ ++N MIS
Sbjct: 124 WSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMIS 183
Query: 139 GFIKFGRLCDAQRLFKEM-----------------PC--------------------PNV 161
GF + G QRLF EM C +V
Sbjct: 184 GFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNEVMQIHGIVYKFGAEVDV 243
Query: 162 VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM 221
V + M+D Y K ++ ++ R +FD+M +++ W+ MI+G N EEA F M
Sbjct: 244 VVESAMVDLYAKCRD---VSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDM 300
Query: 222 ---------------------------------------PQKNVVASTAMITGFCKQGKV 242
Q + ++ ++ + G++
Sbjct: 301 CRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGEL 360
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRG-EEALNLFSQMVRTG-MQPDDLIFVSLFT 300
+ LF +I +DI +WN MI A+ G+G + LF ++ RT +Q V++
Sbjct: 361 GDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVLK 420
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
+C + L GRQ ++L++K V NALV MYS+C I D+ AF + D S
Sbjct: 421 SCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSS 480
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
W++II Q+ + KA +M+ G+ + +S C + I E L
Sbjct: 481 WSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQL----- 535
Query: 421 HDYGIPPRSEHYAC-------LVDVMSRAGQLQRA 448
H + I Y+C ++D+ ++ G ++ +
Sbjct: 536 HVFAIKS---GYSCDVYIGSSIIDMYAKCGNIEES 567
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 197/379 (51%), Gaps = 15/379 (3%)
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASY-NAMIS-- 138
H+ LF +P NVVSWN +++G V +A + F + +A S+ +AM++
Sbjct: 59 HAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFSFTSAMVACA 118
Query: 139 --GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
+K G ++ + M N V +ID Y K G + RA +F + ++ +
Sbjct: 119 QLSLLKLGSSIHSKTVKLGMD-NNTVVANCLIDMYGKC---GSVERAVRIFSDIADKDVI 174
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
SW +I NG ++ MP +VV+ +I G + GK+++A + + C +
Sbjct: 175 SWNSVIAACANNGNIGLGFKFLQLMPNPDVVSYNGLINGIAQAGKIEDAVRILSTMPCPN 234
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+SWN +ITG+ R EAL +F +M +Q D+ F + ASL+ L G +
Sbjct: 235 SSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASLSALTWGMLIHC 294
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
IK+G DS + V ++L+ MYSKCG + D+E F S ++VSWN +I +A++ +
Sbjct: 295 CTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNAMIYGYARNGDSAQ 354
Query: 377 ARSYFDQM-IAVGVRPDGITFLSLLSVCCRAG-KIDESMNLFNLMVHDYGIPPRSEHYAC 434
A S F+ + + +PDGITFL+++S C + + + F+ M+++YGI P +H
Sbjct: 355 AISLFELLKMERDTKPDGITFLNVISACSHSQIPFEMGIQYFDAMINEYGIAPSIKHCCS 414
Query: 435 LVDVMSRAGQLQRACEIIR 453
++ +M + G+L RA ++I
Sbjct: 415 MIRLMGQKGELSRAQKMIH 433
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 161/319 (50%), Gaps = 27/319 (8%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
+ V N ++ Y G + + +F + K+V+SWN+++A C N + F + MP
Sbjct: 141 NTVVANCLIDMYGKCGSVERAVRIFSDIADKDVISWNSVIAACANNGNIGLGFKFLQLMP 200
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARAL 186
+ SYN +I+G + G++ DA R+ MPCPN S+ +I G+V + A +
Sbjct: 201 NPDVVSYNGLINGIAQAGKIEDAVRILSTMPCPNSSSWNSVITGFVNRSR---VPEALEM 257
Query: 187 FDAMPRRN----EVSWTVMINGLVENGLYEEAWELFGRMP------QKNVVASTAMITGF 236
F M +N E ++++++NG+ L W + ++V +++I +
Sbjct: 258 FGKMHLKNLQIDEFTFSIILNGIAS--LSALTWGMLIHCCTIKYGLDSSIVVGSSLIDMY 315
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLIF 295
K G+V++A ++F + R++ SWN MI GYA+NG +A++LF + + +PD + F
Sbjct: 316 SKCGQVNDAESIFNVLSNRNLVSWNAMIYGYARNGDSAQAISLFELLKMERDTKPDGITF 375
Query: 296 VSLFTACASLAL-LDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-----EL 348
+++ +AC+ + + G Q + A++ ++G + +++ + + G + + EL
Sbjct: 376 LNVISACSHSQIPFEMGIQYFDAMINEYGIAPSIKHCCSMIRLMGQKGELSRAQKMIHEL 435
Query: 349 AFGQTSQPDIVSWNTIIAA 367
F V W +++AA
Sbjct: 436 GFESCG----VVWRSLLAA 450
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 111/198 (56%), Gaps = 10/198 (5%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
N+ ST +I + K A LF +I ++ SWN +I+GY G+ ++AL+LF+++
Sbjct: 40 NIYVSTTLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLE 99
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
R+ + D F S ACA L+LL G ++ +K G D++ V N L+ MY KCGS+
Sbjct: 100 RSQICADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVE 159
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQH---VLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+ F + D++SWN++IAA A + L +K F Q++ PD +++ L++
Sbjct: 160 RAVRIFSDIADKDVISWNSVIAACANNGNIGLGFK----FLQLMP---NPDVVSYNGLIN 212
Query: 402 VCCRAGKIDESMNLFNLM 419
+AGKI++++ + + M
Sbjct: 213 GIAQAGKIEDAVRILSTM 230
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV N IAA + GNI + MP DVV++N ++ +G + + + MP
Sbjct: 172 DVISWNSVIAACANNGNIGLGFKFLQLMPNPDVVSYNGLINGIAQAGKIEDAVRILSTMP 231
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFGRLCDAQR 151
N SWN+++ G V + EA F M +N +++ +++G L
Sbjct: 232 CPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASLSALTWGML 291
Query: 152 L----FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
+ K ++V + +ID Y K G + A ++F+ + RN VSW MI G
Sbjct: 292 IHCCTIKYGLDSSIVVGSSLIDMYSKC---GQVNDAESIFNVLSNRNLVSWNAMIYGYAR 348
Query: 208 NGLYEEAWELF 218
NG +A LF
Sbjct: 349 NGDSAQAISLF 359
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG-FDSDLSVNNALVTMYSKCGSIVDS 346
M + L V L L G+Q ++ I+ G F +++ V+ L+ Y K +
Sbjct: 1 MTKNALALVDLIRTATDLCFHKFGQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHA 60
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F + QP++VSWNT+I+ + + KA S F ++ + D +F S + C +
Sbjct: 61 HNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFSFTSAMVACAQL 120
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ ++ + V G+ + CL+D+ + G ++RA I
Sbjct: 121 SLLKLGSSIHSKTV-KLGMDNNTVVANCLIDMYGKCGSVERAVRI 164
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 201/430 (46%), Gaps = 53/430 (12%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
NS + Y +G ++R +F M +++SWN +++GC ++ + + + F +
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 132 SYNAMISGFIK----------FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
I+ ++ GR L + + VS T +ID Y K GG +
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVS-TALIDVYSK---GGKME 451
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS------------ 229
A LF + SW M++G + Y EA LF M ++ A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 230 ---------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+ ++ + K G++ A +F QI D +W
Sbjct: 512 CLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTT 571
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I+G +NG E+AL + QM G+QPD+ F +L AC+ L L+QG+Q +A ++K
Sbjct: 572 VISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLN 631
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
D V +LV MY+KCG+I D+ F + + + WN +I AQH +A ++F+
Sbjct: 632 CAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFN 691
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M + GV PD +TF+ +LS C +G ++ F+ M YG+ P EHY+CLVD +SRA
Sbjct: 692 EMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRA 751
Query: 443 GQLQRACEII 452
G +Q A +++
Sbjct: 752 GHIQEAEKVV 761
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 216/509 (42%), Gaps = 93/509 (18%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+DV+ A + +++ I AR +FD+MP +DVV WN M+ AY G LF A
Sbjct: 155 WDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAF 214
Query: 95 PMK----NVVSWNAMVAGCVQNDMLDE--------AFNYFAAMPERNAASYNAMISGFIK 142
+ VS ++ G + + + A F + + +N +S +++
Sbjct: 215 HRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQ 274
Query: 143 FGRLCDAQRLFKEM-----PCPNVVSYTVMI------------------------DGYVK 173
G +A F++M PC ++ +Y V++ D +V
Sbjct: 275 AGEGWEAVDCFRDMIKSRVPCDSL-TYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVS 333
Query: 174 VK--------EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------G 219
V + G + AR +F M + +SW +I+G +GL E + LF G
Sbjct: 334 VANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSG 393
Query: 220 RMPQKNVVAS----------------------------------TAMITGFCKQGKVDEA 245
+P + + S TA+I + K GK++EA
Sbjct: 394 LLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
LF D+ASWN M+ G+ + EAL LFS M G + D + F + A L
Sbjct: 454 ELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCL 513
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
L QG+Q +A+VIK F DL V + ++ MY KCG + + F Q PD V+W T+I
Sbjct: 514 VRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVI 573
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF-NLMVHDYG 424
+ ++ +A + QM GV+PD TF +L+ C +++ + N+M +
Sbjct: 574 SGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCA 633
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
P LVD+ ++ G ++ A + R
Sbjct: 634 FDPFV--MTSLVDMYAKCGNIEDAYGLFR 660
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 200/434 (46%), Gaps = 48/434 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPT--KDVVTWNSMLTAYWHSGFPQHSRALFDA 93
D Y N I +++ G++ +AR++FD P +D+VT+N++L AY H+G +A
Sbjct: 47 DRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEA 106
Query: 94 MPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
+ ++ + M+ L F +A+ A+ +K G D
Sbjct: 107 FHIFRLLRQSVML---TTRHTLSPLFKLCLLYGSPSAS--EALQGYAVKIGLQWD----- 156
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
V +++ Y K + I AR LFD MP R+ V W VM+ VE G +E
Sbjct: 157 -------VFVAGALVNIYAKFQR---IREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDE 206
Query: 214 AWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRC-----------RDIA 258
LF + + V+ ++ G K+ + +Q+R D+
Sbjct: 207 VLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERE---LEQVRAYATKLFVCDDDSDVT 263
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
WN ++ Y Q G G EA++ F M+++ + D L ++ + + ASL L+ G+Q + V
Sbjct: 264 VWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV 323
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
++ G+D +SV N+ + MY K GS+ + FGQ + D++SWNT+I+ A+ L +
Sbjct: 324 VRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSL 383
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH----DYGIPPRSEHYAC 434
F ++ G+ PD T S+L C ++ES + VH GI S
Sbjct: 384 RLFIDLLRSGLLPDQFTITSVLRAC---SSLEESYCV-GRQVHTCALKAGIVLDSFVSTA 439
Query: 435 LVDVMSRAGQLQRA 448
L+DV S+ G+++ A
Sbjct: 440 LIDVYSKGGKMEEA 453
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 156/333 (46%), Gaps = 28/333 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + + I +S+ G + A +F D+ +WN+M+ + S + + LF M
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMH 492
Query: 96 MKN------VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISG----FIKFGR 145
+ + A AGC+ L + A + + +ISG ++K G
Sbjct: 493 ERGEKADQITFANAAKAAGCLVR--LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGE 550
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR------NEVSWT 199
+ A+++F ++P P+ V++T +I G V+ E +ALF R +E ++
Sbjct: 551 MKSARKVFNQIPSPDDVAWTTVISGCVENGE-----EEQALFTYHQMRLAGVQPDEYTFA 605
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVV----ASTAMITGFCKQGKVDEAWTLFQQIRCR 255
++ E+ ++ + + N T+++ + K G +++A+ LF+++ R
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
+A WN MI G AQ+G EEALN F++M G+ PD + F+ + +AC+ L + +
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 316 ALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSE 347
+ K +G + ++ + LV S+ G I ++E
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAE 758
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 25/254 (9%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D+ + +L Y G + +R +F+ +P + V+W +++GCV+N ++A + M
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMR 593
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSY---------TVMIDGYVKVKEG 177
+ +K L A K++ N++ T ++D Y K
Sbjct: 594 LAGVQPDEYTFATLVKACSLLTALEQGKQIH-ANIMKLNCAFDPFVMTSLVDMYAKC--- 649
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMI 233
G I A LF M R+ W MI GL ++G EEA F M + V V ++
Sbjct: 650 GNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVL 709
Query: 234 TGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+ G +A+ F ++ +I ++ ++ ++ G +EA + S M
Sbjct: 710 SACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM---PF 766
Query: 289 QPDDLIFVSLFTAC 302
+ ++ +L AC
Sbjct: 767 EASATMYRTLLNAC 780
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP--DIVSWNTIIAAF 368
G++T+A+++ G + D V N L+TMY+KCGS+ + F T Q D+V++N I+AA+
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 369 AQ 370
A
Sbjct: 92 AH 93
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
YD++ + + + + G + +AR+VF+++P+ D V W ++++ +G + +ALF
Sbjct: 533 YDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENG--EEEQALFTYH 590
Query: 95 PMK------NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFG 144
M+ + ++ +V C L++ A + + N A +++ + K G
Sbjct: 591 QMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCG 650
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTV 200
+ DA LF+ M +V + MI G + + G A F+ M R + V++
Sbjct: 651 NIEDAYGLFRRMNTRSVALWNAMIVG---LAQHGNAEEALNFFNEMKSRGVTPDRVTFIG 707
Query: 201 MINGLVENGLYEEAWELFGRMP-----QKNVVASTAMITGFCKQGKVDEA 245
+++ +GL +A++ F M + + + ++ + G + EA
Sbjct: 708 VLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEA 757
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 201/430 (46%), Gaps = 53/430 (12%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
NS + Y +G ++R +F M +++SWN +++GC ++ + + + F +
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 132 SYNAMISGFIK----------FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
I+ ++ GR L + + VS T +ID Y K GG +
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVS-TALIDVYSK---GGKME 451
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS------------ 229
A LF + SW M++G + Y EA LF M ++ A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 230 ---------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+ ++ + K G++ A +F QI D +W
Sbjct: 512 CLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTT 571
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I+G +NG E+AL + QM G+QPD+ F +L AC+ L L+QG+Q +A ++K
Sbjct: 572 VISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLN 631
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
D V +LV MY+KCG+I D+ F + + + WN +I AQH +A ++F+
Sbjct: 632 CAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFN 691
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M + GV PD +TF+ +LS C +G ++ F+ M YG+ P EHY+CLVD +SRA
Sbjct: 692 EMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRA 751
Query: 443 GQLQRACEII 452
G +Q A +++
Sbjct: 752 GHIQEAEKVV 761
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 216/509 (42%), Gaps = 93/509 (18%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+DV+ A + +++ I AR +FD+MP +DVV WN M+ AY G LF A
Sbjct: 155 WDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAF 214
Query: 95 PMK----NVVSWNAMVAGCVQNDMLDE--------AFNYFAAMPERNAASYNAMISGFIK 142
+ VS ++ G + + + A F + + +N +S +++
Sbjct: 215 HRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQ 274
Query: 143 FGRLCDAQRLFKEM-----PCPNVVSYTVMI------------------------DGYVK 173
G +A F++M PC ++ +Y V++ D +V
Sbjct: 275 AGEGWEAVDCFRDMIKSRVPCDSL-TYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVS 333
Query: 174 VK--------EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------G 219
V + G + AR +F M + +SW +I+G +GL E + LF G
Sbjct: 334 VANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSG 393
Query: 220 RMPQKNVVAS----------------------------------TAMITGFCKQGKVDEA 245
+P + + S TA+I + K GK++EA
Sbjct: 394 LLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
LF D+ASWN M+ G+ + EAL LFS M G + D + F + A L
Sbjct: 454 ELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCL 513
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
L QG+Q +A+VIK F DL V + ++ MY KCG + + F Q PD V+W T+I
Sbjct: 514 VRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVI 573
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF-NLMVHDYG 424
+ ++ +A + QM GV+PD TF +L+ C +++ + N+M +
Sbjct: 574 SGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCA 633
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
P LVD+ ++ G ++ A + R
Sbjct: 634 FDPFV--MTSLVDMYAKCGNIEDAYGLFR 660
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 200/434 (46%), Gaps = 48/434 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPT--KDVVTWNSMLTAYWHSGFPQHSRALFDA 93
D Y N I +++ G++ +AR++FD P +D+VT+N++L AY H+G +A
Sbjct: 47 DRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEA 106
Query: 94 MPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
+ ++ + M+ L F +A+ A+ +K G D
Sbjct: 107 FHIFRLLRQSVML---TTRHTLSPLFKLCLLYGSPSAS--EALQGYAVKIGLQWD----- 156
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
V +++ Y K + I AR LFD MP R+ V W VM+ VE G +E
Sbjct: 157 -------VFVAGALVNIYAKFQR---IREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDE 206
Query: 214 AWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRC-----------RDIA 258
LF + + V+ ++ G K+ + +Q+R D+
Sbjct: 207 VLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERE---LEQVRAYATKLFVCDDDSDVT 263
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
WN ++ Y Q G G EA++ F M+++ + D L ++ + + ASL L+ G+Q + V
Sbjct: 264 VWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV 323
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
++ G+D +SV N+ + MY K GS+ + FGQ + D++SWNT+I+ A+ L +
Sbjct: 324 VRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSL 383
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH----DYGIPPRSEHYAC 434
F ++ G+ PD T S+L C ++ES + VH GI S
Sbjct: 384 RLFIDLLRSGLLPDQFTITSVLRAC---SSLEESYCV-GRQVHTCALKAGIVLDSFVSTA 439
Query: 435 LVDVMSRAGQLQRA 448
L+DV S+ G+++ A
Sbjct: 440 LIDVYSKGGKMEEA 453
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 156/333 (46%), Gaps = 28/333 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + + I +S+ G + A +F D+ +WN+M+ + S + + LF M
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMH 492
Query: 96 MKN------VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISG----FIKFGR 145
+ + A AGC+ L + A + + +ISG ++K G
Sbjct: 493 ERGEKADQITFANAAKAAGCLVR--LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGE 550
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR------NEVSWT 199
+ A+++F ++P P+ V++T +I G V+ E +ALF R +E ++
Sbjct: 551 MKSARKVFNQIPSPDDVAWTTVISGCVENGE-----EEQALFTYHQMRLAGVQPDEYTFA 605
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVV----ASTAMITGFCKQGKVDEAWTLFQQIRCR 255
++ E+ ++ + + N T+++ + K G +++A+ LF+++ R
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
+A WN MI G AQ+G EEALN F++M G+ PD + F+ + +AC+ L + +
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 316 ALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSE 347
+ K +G + ++ + LV S+ G I ++E
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAE 758
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 25/254 (9%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D+ + +L Y G + +R +F+ +P + V+W +++GCV+N ++A + M
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMR 593
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSY---------TVMIDGYVKVKEG 177
+ +K L A K++ N++ T ++D Y K
Sbjct: 594 LAGVQPDEYTFATLVKACSLLTALEQGKQIH-ANIMKLNCAFDPFVMTSLVDMYAKC--- 649
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMI 233
G I A LF M R+ W MI GL ++G EEA F M + V V ++
Sbjct: 650 GNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVL 709
Query: 234 TGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+ G +A+ F ++ +I ++ ++ ++ G +EA + S M
Sbjct: 710 SACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM---PF 766
Query: 289 QPDDLIFVSLFTAC 302
+ ++ +L AC
Sbjct: 767 EASATMYRTLLNAC 780
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP--DIVSWNTIIAAF 368
G++T+A+++ G + D V N L+TMY+KCGS+ + F T Q D+V++N I+AA+
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 369 AQ 370
A
Sbjct: 92 AH 93
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
YD++ + + + + G + +AR+VF+++P+ D V W ++++ +G + +ALF
Sbjct: 533 YDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENG--EEEQALFTYH 590
Query: 95 PMK------NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFG 144
M+ + ++ +V C L++ A + + N A +++ + K G
Sbjct: 591 QMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCG 650
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTV 200
+ DA LF+ M +V + MI G + + G A F+ M R + V++
Sbjct: 651 NIEDAYGLFRRMNTRSVALWNAMIVG---LAQHGNAEEALNFFNEMKSRGVTPDRVTFIG 707
Query: 201 MINGLVENGLYEEAWELFGRMP-----QKNVVASTAMITGFCKQGKVDEA 245
+++ +GL +A++ F M + + + ++ + G + EA
Sbjct: 708 VLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEA 757
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 201/430 (46%), Gaps = 53/430 (12%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
NS + Y +G ++R +F M +++SWN +++GC ++ + + + F +
Sbjct: 336 NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLL 395
Query: 132 SYNAMISGFIK----------FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
I+ ++ GR L + + VS T +ID Y K GG +
Sbjct: 396 PDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVS-TALIDVYSK---GGKME 451
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS------------ 229
A LF + SW M++G + Y EA LF M ++ A
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAG 511
Query: 230 ---------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+ ++ + K G++ A +F QI D +W
Sbjct: 512 CLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTT 571
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I+G +NG E+AL + QM G+QPD+ F +L AC+ L L+QG+Q +A ++K
Sbjct: 572 VISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLN 631
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
D V +LV MY+KCG+I D+ F + + + WN +I AQH +A ++F+
Sbjct: 632 CAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFN 691
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M + GV PD +TF+ +LS C +G ++ F+ M YG+ P EHY+CLVD +SRA
Sbjct: 692 EMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRA 751
Query: 443 GQLQRACEII 452
G +Q A +++
Sbjct: 752 GHIQEAEKVV 761
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/509 (25%), Positives = 216/509 (42%), Gaps = 93/509 (18%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+DV+ A + +++ I AR +FD+MP +DVV WN M+ AY G LF A
Sbjct: 155 WDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAF 214
Query: 95 PMK----NVVSWNAMVAGCVQNDMLDE--------AFNYFAAMPERNAASYNAMISGFIK 142
+ VS ++ G + + + A F + + +N +S +++
Sbjct: 215 HRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQ 274
Query: 143 FGRLCDAQRLFKEM-----PCPNVVSYTVMI------------------------DGYVK 173
G +A F++M PC ++ +Y V++ D +V
Sbjct: 275 AGEGWEAVDCFRDMIKSRVPCDSL-TYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVS 333
Query: 174 VK--------EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------G 219
V + G + AR +F M + +SW +I+G +GL E + LF G
Sbjct: 334 VANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSG 393
Query: 220 RMPQKNVVAS----------------------------------TAMITGFCKQGKVDEA 245
+P + + S TA+I + K GK++EA
Sbjct: 394 LLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
LF D+ASWN M+ G+ + EAL LFS M G + D + F + A L
Sbjct: 454 ELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCL 513
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
L QG+Q +A+VIK F DL V + ++ MY KCG + + F Q PD V+W T+I
Sbjct: 514 VRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVI 573
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF-NLMVHDYG 424
+ ++ +A + QM GV+PD TF +L+ C +++ + N+M +
Sbjct: 574 SGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCA 633
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
P LVD+ ++ G ++ A + R
Sbjct: 634 FDPFV--MTSLVDMYAKCGNIEDAYGLFR 660
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 200/434 (46%), Gaps = 48/434 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPT--KDVVTWNSMLTAYWHSGFPQHSRALFDA 93
D Y N I +++ G++ +AR++FD P +D+VT+N++L AY H+G +A
Sbjct: 47 DRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEA 106
Query: 94 MPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
+ ++ + M+ L F +A+ A+ +K G D
Sbjct: 107 FHIFRLLRQSVML---TTRHTLSPLFKLCLLYGSPSAS--EALQGYAVKIGLQWD----- 156
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
V +++ Y K + I AR LFD MP R+ V W VM+ VE G +E
Sbjct: 157 -------VFVAGALVNIYAKFQR---IREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDE 206
Query: 214 AWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRC-----------RDIA 258
LF + + V+ ++ G K+ + +Q+R D+
Sbjct: 207 VLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERE---LEQVRAYATKLFVCDDDSDVT 263
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
WN ++ Y Q G G EA++ F M+++ + D L ++ + + ASL L+ G+Q + V
Sbjct: 264 VWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAV 323
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
++ G+D +SV N+ + MY K GS+ + FGQ + D++SWNT+I+ A+ L +
Sbjct: 324 VRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSL 383
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH----DYGIPPRSEHYAC 434
F ++ G+ PD T S+L C ++ES + VH GI S
Sbjct: 384 RLFIDLLRSGLLPDQFTITSVLRAC---SSLEESYCV-GRQVHTCALKAGIVLDSFVSTA 439
Query: 435 LVDVMSRAGQLQRA 448
L+DV S+ G+++ A
Sbjct: 440 LIDVYSKGGKMEEA 453
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 156/333 (46%), Gaps = 28/333 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + + I +S+ G + A +F D+ +WN+M+ + S + + LF M
Sbjct: 433 DSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMH 492
Query: 96 MKN------VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISG----FIKFGR 145
+ + A AGC+ L + A + + +ISG ++K G
Sbjct: 493 ERGEKADQITFANAAKAAGCLVR--LQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGE 550
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR------NEVSWT 199
+ A+++F ++P P+ V++T +I G V+ E +ALF R +E ++
Sbjct: 551 MKSARKVFNQIPSPDDVAWTTVISGCVENGE-----EEQALFTYHQMRLAGVQPDEYTFA 605
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVV----ASTAMITGFCKQGKVDEAWTLFQQIRCR 255
++ E+ ++ + + N T+++ + K G +++A+ LF+++ R
Sbjct: 606 TLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTR 665
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
+A WN MI G AQ+G EEALN F++M G+ PD + F+ + +AC+ L + +
Sbjct: 666 SVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNF 725
Query: 316 ALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSE 347
+ K +G + ++ + LV S+ G I ++E
Sbjct: 726 DSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAE 758
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 25/254 (9%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D+ + +L Y G + +R +F+ +P + V+W +++GCV+N ++A + M
Sbjct: 534 DLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMR 593
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSY---------TVMIDGYVKVKEG 177
+ +K L A K++ N++ T ++D Y K
Sbjct: 594 LAGVQPDEYTFATLVKACSLLTALEQGKQIH-ANIMKLNCAFDPFVMTSLVDMYAKC--- 649
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMI 233
G I A LF M R+ W MI GL ++G EEA F M + V V ++
Sbjct: 650 GNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVL 709
Query: 234 TGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+ G +A+ F ++ +I ++ ++ ++ G +EA + S M
Sbjct: 710 SACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM---PF 766
Query: 289 QPDDLIFVSLFTAC 302
+ ++ +L AC
Sbjct: 767 EASATMYRTLLNAC 780
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
YD++ + + + + G + +AR+VF+++P+ D V W ++++ +G + +ALF
Sbjct: 533 YDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENG--EEEQALFTYH 590
Query: 95 PMK------NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFG 144
M+ + ++ +V C L++ A + + N A +++ + K G
Sbjct: 591 QMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCG 650
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTV 200
+ DA LF+ M +V + MI G + + G A F+ M R + V++
Sbjct: 651 NIEDAYGLFRRMNTRSVALWNAMIVG---LAQHGNAEEALNFFNEMKSRGVTPDRVTFIG 707
Query: 201 MINGLVENGLYEEAWELFGRMP-----QKNVVASTAMITGFCKQGKVDEA 245
+++ +GL +A++ F M + + + ++ + G + EA
Sbjct: 708 VLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEA 757
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP--DIVSWNTIIAAF 368
G++T+A+++ G + D V N L+TMY+KCGS+ + F T Q D+V++N I+AA+
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 369 AQ 370
A
Sbjct: 92 AH 93
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 213/400 (53%), Gaps = 18/400 (4%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
+D+ NS+L Y +G + +F+ + +VVSWN M++G ++A F M
Sbjct: 284 RDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRM 343
Query: 126 P----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
E + +Y M++ +K G + +++F M P+++S+ ++ GY + + G
Sbjct: 344 QCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAILSGYNQSADHG--- 400
Query: 182 RARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQK-----NVVASTAM 232
A LF M + + + ++++ E GL E ++ + QK +V ++++
Sbjct: 401 EAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHA-VSQKLGFYDDVYVASSL 459
Query: 233 ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
I + K GK++ + +F ++ D+ WN MI G++ N ++AL F +M + G P +
Sbjct: 460 INVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFPSE 519
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
F ++ ++CA L+ L QG+Q +A +IK G+ ++ V ++LV MY KCG + + F
Sbjct: 520 FSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYFDM 579
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
+IV+WN +I +A + +A S + MI+ G +PD ITF+++L+ C + +DE
Sbjct: 580 MPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEG 639
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+ +F+ M+ + + P+ +HY C++D + R G+ E+I
Sbjct: 640 VEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEV-EVI 678
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 160/328 (48%), Gaps = 24/328 (7%)
Query: 113 DMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV 172
+ + A + F +P +N SYNA++S F K L A RLF +MP N VS +I V
Sbjct: 54 NQITSAHHVFDKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMV 113
Query: 173 KVKEGGGIARARALFDAM-----PRRNEVSWTVMIN---GLVENGLYEEAWELFGRMP-Q 223
K G +A +D M + + +++ + + GL + L ++
Sbjct: 114 K---NGYERQALDTYDLMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFD 170
Query: 224 KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
N+ S A++ + K G ++A+ +F+ I + ++ M+ G +Q + +E L LF M
Sbjct: 171 SNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLM 230
Query: 284 VRTGMQPDDLIFVSLFTACA---SLALLD---------QGRQTYALVIKHGFDSDLSVNN 331
+R G+ D + ++ CA S + D QG+Q + L +KHGF+ DL + N
Sbjct: 231 LRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCN 290
Query: 332 ALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRP 391
+L+ MY+K G + +E F + +VSWN +I+ + KA F +M G P
Sbjct: 291 SLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEP 350
Query: 392 DGITFLSLLSVCCRAGKIDESMNLFNLM 419
D +T++++L+ C ++G + +F+ M
Sbjct: 351 DDVTYINMLTACVKSGDVKVGRQIFDCM 378
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/511 (23%), Positives = 200/511 (39%), Gaps = 116/511 (22%)
Query: 1 MLSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVF 60
+L S I + +L AR F L FS D + N I +S+ IT+A VF
Sbjct: 11 LLQSCITNKSLSSAKIIHARIFRFTL-----FS--DTFLCNHLIDLYSKCNQITSAHHVF 63
Query: 61 DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFN 120
DK+P K++ ++N++L+A+ S Q++ LF MP +N VS N ++ V+N +A +
Sbjct: 64 DKIPHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALD 123
Query: 121 YFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC--------------PNVVSYTV 166
+ M Y ++ I F + A K++ C N+
Sbjct: 124 TYDLM-----MVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNA 178
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
++ Y K G A +F+ + NEV++T M+ GL + +E ELF M +K +
Sbjct: 179 LLCMYTKC---GLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGI 235
Query: 227 VASTAMIT------------GFC------------------------------------- 237
+ ++ G C
Sbjct: 236 CVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDM 295
Query: 238 --KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
K G +D A +F+ + + SWNIMI+GY E+AL F +M G +PDD+ +
Sbjct: 296 YAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTY 355
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
+++ TAC + GRQ F S
Sbjct: 356 INMLTACVKSGDVKVGRQI-----------------------------------FDCMSS 380
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
P ++SWN I++ + Q + +A F +M PD T +LS C G + E+
Sbjct: 381 PSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLL-EAGKQ 439
Query: 416 FNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
+ + G + L++V S+ G+++
Sbjct: 440 VHAVSQKLGFYDDVYVASSLINVYSKCGKME 470
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 38/225 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DVY A+ I +S+ G + ++ VF K+ DVV WNSM+ + + Q + A F M
Sbjct: 452 DVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRM- 510
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQ----R 151
F +F + S+ + S K L Q +
Sbjct: 511 ---------------------RQFGFFPS-----EFSFATIASSCAKLSSLFQGQQIHAQ 544
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
+ K+ NV + +++ Y K G + AR FD MP +N V+W MI+G NG
Sbjct: 545 IIKDGYVDNVFVGSSLVEMYCKC---GDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYG 601
Query: 212 EEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQI 252
EA L+ M + + + A++T VDE +F +
Sbjct: 602 LEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSM 646
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 48/271 (17%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNV 99
+ + + G++ AAR FD MP K++VTWN M+ Y H+G+ + +L+ M +
Sbjct: 561 VEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDD 620
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
+++ A++ C + ++DE F++M ++ F+ + P
Sbjct: 621 ITFVAVLTACSHSALVDEGVEIFSSMLQK------------------------FEVV--P 654
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE-VSWTVMINGL---VENGLYEEAW 215
+ YT +ID +V G + D MP +++ + W V+++ L + A
Sbjct: 655 KLDHYTCIIDCLGRV---GRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAA 711
Query: 216 ELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT--GYAQNGRG 273
E R+ +N + + G+ D+A + RD+ S N + GY+++
Sbjct: 712 EELHRLNPRNSAPYVLLANMYSSMGRWDDAQVV------RDLMSDNQIHKDPGYSRSEFK 765
Query: 274 EEALN---LFSQMVRTGMQPDDLIFVSLFTA 301
+ N F+ M DD FV T+
Sbjct: 766 YDVQNKTSFFANMYSCFGNLDDAQFVRDLTS 796
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 219/436 (50%), Gaps = 30/436 (6%)
Query: 44 IAAFSRAGNITAARQVFDKMPT---KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
I +S+ I A +VF+ PT K+V +N+++ + +G QHS L+ M + VV
Sbjct: 71 INMYSKCTLINYALKVFN-YPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVV 129
Query: 101 SWNAMVAGCVQNDMLD--EAFN-------YFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
+ CV D + F F E + +A+++ ++KF + DA
Sbjct: 130 IPDKFTFPCVIRACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHE 189
Query: 152 LFKEMPCPNVVSYTVMIDGYVKV---KEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
+F+E+P +VV + M++GY ++ +E G+ R +P R V+ + I ++
Sbjct: 190 VFEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVI-- 247
Query: 209 GLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
G ++ + G + + +VV A+I + K +A +F+ + +D+ SWN +I
Sbjct: 248 GDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSII 307
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
+ + + G L LF +M+ +QPD + ++ AC LA L GR+ + +I +G
Sbjct: 308 SVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACTHLAALMHGREIHGYMIVNGLG 367
Query: 325 S--------DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
D+ +NNAL+ MY+KCGS+ D+ + F ++ D+ SWN +I + H +
Sbjct: 368 KEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGDE 427
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
A F +M + P+ I+F+ LLS C AG + E + M YG+PP EHY C++
Sbjct: 428 ALDTFTRMRQAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEMDSKYGVPPSVEHYTCVI 487
Query: 437 DVMSRAGQLQRACEII 452
D++ RAG+L A +++
Sbjct: 488 DMLCRAGKLVEAYDLM 503
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/389 (20%), Positives = 151/389 (38%), Gaps = 91/389 (23%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ + + + + + A +VF+++P +DVV WNSM+ Y G + + +F M
Sbjct: 167 DVFVGSALVTTYLKFWLVVDAHEVFEELPVRDVVLWNSMVNGYAQIGCFEEALGMFRRMV 226
Query: 96 MKNVVSWNAMVAG------------------------------CVQNDMLD--------- 116
VV V G V N ++D
Sbjct: 227 ENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGFLTKMGYHSSVVVLNALIDMYGKCKCAS 286
Query: 117 EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYV 172
+A N F M E++ S+N++IS + G +LF M P++V+ T ++
Sbjct: 287 DALNVFEVMDEKDMFSWNSIISVHQRCGDHYGTLKLFDRMLGNKVQPDLVTVTTVLPACT 346
Query: 173 KVKEGGGIARARALFDAM--------PRRNEVSWTVMINGLVEN----GLYEEAWELFGR 220
+ + R + M R N+ ++ N L++ G +A +F
Sbjct: 347 HL---AALMHGREIHGYMIVNGLGKEGRNNDFDDVLLNNALMDMYAKCGSMRDARMVFDN 403
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
M +K+V + MITG+ G DEA F ++R
Sbjct: 404 MTEKDVASWNIMITGYGMHGYGDEALDTFTRMR--------------------------- 436
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSK 339
+ + P+++ FV L +AC+ ++ +G + A + K+G + ++ M +
Sbjct: 437 ----QAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEMDSKYGVPPSVEHYTCVIDMLCR 492
Query: 340 CGSIVDS-ELAFGQTSQPDIVSWNTIIAA 367
G +V++ +L + D V W ++AA
Sbjct: 493 AGKLVEAYDLMLTMPFKADPVGWRALLAA 521
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 10/201 (4%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV N + +++ G++ AR VFD M KDV +WN M+T Y G+ + F M
Sbjct: 377 DVLLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFTRMR 436
Query: 96 ----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRL 146
+ N +S+ +++ C M+ E + A M + + Y +I + G+L
Sbjct: 437 QAQLVPNEISFVGLLSACSHAGMVKEGLEFLAEMDSKYGVPPSVEHYTCVIDMLCRAGKL 496
Query: 147 CDAQRLFKEMPCP-NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
+A L MP + V + ++ K+ A + + + ++ +M N
Sbjct: 497 VEAYDLMLTMPFKADPVGWRALLAACRIYKDTDLAEIAASKVIELEPGHCGNYVLMSNVY 556
Query: 206 VENGLYEEAWELFGRMPQKNV 226
G YE+ EL M Q+NV
Sbjct: 557 GVVGRYEQVSELRHTMRQQNV 577
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
++ CA L +G+Q + ++K+GF + +++ MYSKC I + F +
Sbjct: 33 ITSLQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYPTH 92
Query: 356 PD--IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR-PDGITFLSLLSVCCRAGKIDES 412
D + ++N IIA F + L + + QM +GV PD TF ++ C AG + E
Sbjct: 93 HDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAGDVFEV 152
Query: 413 MNLFNLM 419
+ L+
Sbjct: 153 KKIHGLL 159
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/383 (30%), Positives = 185/383 (48%), Gaps = 46/383 (12%)
Query: 117 EAFNYFAAMPERNAASY------NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDG 170
EA F + NA SY +A+IS I+ + +R+F M M++
Sbjct: 104 EAMELFEMLELENAESYVGASTYDALISACIRLRSIIGVKRVFNYMKNSGFELDLYMMNR 163
Query: 171 YVKVKEGGGIAR-ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF----------- 218
+ + + R AR FD MP R+ SW MI GLV++ Y EA+ELF
Sbjct: 164 VLFMHVQCNLMRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGK 223
Query: 219 -------------------GRMPQKNVV---------ASTAMITGFCKQGKVDEAWTLFQ 250
GR ++ A+I + K G +++A +F
Sbjct: 224 SRTFAAMVRASARLDCIEVGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFD 283
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
Q+ + WN +I GYA G EEAL ++ +M +G + D + T CA LA L+
Sbjct: 284 QMPQKTTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEH 343
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
G+Q +A +++ GF +DL N+ALV YSK G + ++ F + + +I+SWN +IA +
Sbjct: 344 GKQGHAALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGH 403
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSE 430
H +A F++M+ + P+ +TFL++LS C +G + +F M D+ I PR+
Sbjct: 404 HGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNIKPRAM 463
Query: 431 HYACLVDVMSRAGQLQRACEIIR 453
HYAC+++++ R G L A +IR
Sbjct: 464 HYACMIELLGREGLLDEAVALIR 486
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 196/446 (43%), Gaps = 74/446 (16%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSR 88
S+YD I+A R +I ++VF+ M D+ N +L + + +R
Sbjct: 124 STYDAL-----ISACIRLRSIIGVKRVFNYMKNSGFELDLYMMNRVLFMHVQCNLMRDAR 178
Query: 89 ALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISG----- 139
FD MP ++ SW M+ G V + EAF F M E + ++ AM+
Sbjct: 179 TWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSRTFAAMVRASARLD 238
Query: 140 FIKFGR---LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
I+ GR C +R P + +ID Y K G I AR +FD MP++ V
Sbjct: 239 CIEVGRQIHTCILKRAVNGDPFVDCA----LIDMYSKC---GNIEDARCVFDQMPQKTTV 291
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQK-------------------------------- 224
W +I G G EEA ++ +M
Sbjct: 292 GWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGHAAL 351
Query: 225 -------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
++VA++A++ + K G+++ A +F ++ ++I SWN +I GY +GRGEEA+
Sbjct: 352 VRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRGEEAI 411
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTM 336
+F +M++ M P+ + F+++ +AC+ L ++G + + ++ H ++ +
Sbjct: 412 EMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNIKPRAMHYACMIEL 471
Query: 337 YSKCGSIVDSELAFGQTS--QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
+ G ++D +A + + P + W ++ A H + +++ G+ P+ +
Sbjct: 472 LGREG-LLDEAVALIRNAPFPPTLNMWAALLIACRMHKNLELGKFAAEKL--YGMEPEKL 528
Query: 395 -TFLSLLSVCCRAGKIDESMNLFNLM 419
++ LL++ +GK+ E+ ++ +
Sbjct: 529 CNYVMLLNIYNSSGKLKEAADVLQTL 554
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 4 SIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKM 63
SI+++I + + H LV + F + V + L + +S+ G + AR VFDKM
Sbjct: 329 SIVITICARLASLEHGKQGHAALV-RRGFGTDLVANSAL-VNFYSKWGRMENARHVFDKM 386
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAF 119
K++++WN+++ Y H G + + +F+ M +N+ V++ A+++ C + + + +
Sbjct: 387 HRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQENMTPNHVTFLAVLSACSYSGLSERGW 446
Query: 120 NYFAAMPERN-----AASYNAMISGFIKFGRLCDAQRLFKEMPCP---NVVSYTVMIDGY 171
F +M + + A Y MI + G L +A L + P P N+ + ++
Sbjct: 447 EIFQSMSQDHNIKPRAMHYACMIELLGREGLLDEAVALIRNAPFPPTLNMWAALLIACRM 506
Query: 172 VKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
K E G A A L+ P + ++ +++N +G +EA ++ + +K +
Sbjct: 507 HKNLELGKFA-AEKLYGMEPEK-LCNYVMLLNIYNSSGKLKEAADVLQTLKRKGL 559
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 103/310 (33%), Positives = 159/310 (51%), Gaps = 40/310 (12%)
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP-------------------- 222
AR LFD +P++N W V+I G NG ++ A L+ +M
Sbjct: 101 ARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSA 160
Query: 223 -------------------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
++++ A+I + K G V +A +F +I RD WN M
Sbjct: 161 LSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSM 220
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
+ YAQNG +E+++L +M G++P + V++ ++ A +A L GR+ + +HGF
Sbjct: 221 LAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGF 280
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
S+ V AL+ MY+KCGS+ + F + + +VSWN II +A H L A FD+
Sbjct: 281 QSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDK 340
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
M RPD ITF+ +L+ C R +DE L+NLMV DYGI P +HY C++D++ G
Sbjct: 341 MRKED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCG 399
Query: 444 QLQRACEIIR 453
QL A ++IR
Sbjct: 400 QLDEAYDLIR 409
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 103/173 (59%)
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+T ++ + + A LF +I +++ WN++I GYA NG + A+ L+ +M+ G+
Sbjct: 85 ATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGL 144
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
+PD+ + AC++L+ + +GR + VIK G++ DL V AL+ MY+KCG ++D+
Sbjct: 145 RPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGR 204
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
F + D V WN+++AA+AQ+ ++ S +M A GVRP T ++++S
Sbjct: 205 VFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVIS 257
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 195/435 (44%), Gaps = 24/435 (5%)
Query: 1 MLSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVF 60
+L S I S AL P A+ H + + + ++ V+ ++ + ++ AR +F
Sbjct: 53 LLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVH-------LYAVSNSLLNARNLF 105
Query: 61 DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNA----MVAGCVQNDMLD 116
DK+P +++ WN ++ Y +G ++ L+ M + N ++ C +
Sbjct: 106 DKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIG 165
Query: 117 EAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV 172
E + + ER+ A+I + K G + DA R+F ++ + V + M+ Y
Sbjct: 166 EGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYA 225
Query: 173 KVKE-GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG----RMPQKNVV 227
+ I+ R + R E + +I+ + E+ G Q N
Sbjct: 226 QNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDK 285
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
TA+I + K G V A LF+++R + + SWN +ITGYA +G AL+LF +M R
Sbjct: 286 VKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKM-RKE 344
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDS 346
+PD + FV + AC+ LLD+GR Y L+++ +G + ++ + CG + ++
Sbjct: 345 DRPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEA 404
Query: 347 -ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
+L + +PD W ++ + H A +++I + G ++ L ++ +
Sbjct: 405 YDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSG-NYVILANMYAQ 463
Query: 406 AGKIDESMNLFNLMV 420
+GK + L +M+
Sbjct: 464 SGKWEGVEKLRQVMI 478
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
+ SL +C L+ G+Q +A G + + LV +Y+ S++++ F +
Sbjct: 50 YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIP 109
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
+ ++ WN +I +A + + A + +M+ G+RPD T +L C I E +
Sbjct: 110 KQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRS 169
Query: 415 LFNLMVHDYGIPPRSEH----YACLVDVMSRAG 443
+H+Y I E A L+D+ ++ G
Sbjct: 170 -----IHEYVIKSGWERDLFVGAALIDMYAKCG 197
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 122/434 (28%), Positives = 216/434 (49%), Gaps = 15/434 (3%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
YD++ + + + G I A +VF+++ KD+V+W S++ Y +G+P+ + LF
Sbjct: 150 EYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYR 209
Query: 94 MPMK-------NVVSWNAMVAGCVQNDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFG 144
M +VS VA +++ + ++ + +A E + NA++ + + G
Sbjct: 210 MQEAGLKADSVTLVSILPAVAD-IKDLRIGKSIHGYALRLGFESKVSVINALLYMYFECG 268
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKV-KEGGGIARARALFDAMPRRNEVSWTVMIN 203
A+ +F+ M VS+ MIDGY ++ K A + D V+ +
Sbjct: 269 CERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALT 328
Query: 204 GLVENGLYEEAWELFGRMPQKN----VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
+ G E + + QK V ++++ + K +VD A ++F+ ++ + +
Sbjct: 329 ACADLGDLERGRFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVT 388
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN MI GYAQNG EAL LF M ++PD V++ TA A L++ + + L I
Sbjct: 389 WNAMILGYAQNGCVNEALYLFCVMQSQEVKPDCFTLVAVITALADLSVNRMAKWIHGLAI 448
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+ D+D+ V AL+ MY+KCG+ + F + +++WN +I + H L +A
Sbjct: 449 RTFMDNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHGLGKEAID 508
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
FD M V P+ TFLS++S C +G ++E ++ F M DYG+ P +HY+ +VD++
Sbjct: 509 IFDNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAVVDLL 568
Query: 440 SRAGQLQRACEIIR 453
RAG+L A +I
Sbjct: 569 GRAGKLHGAWNLIE 582
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 152/304 (50%), Gaps = 18/304 (5%)
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----- 190
+I+ F K G + +A +F + V Y M+ GY K + A + M
Sbjct: 58 LINMFFKHGSINEASLVFDTVEHKQDVLYHAMLKGYAK---NSSLCDALCFYHRMQNDGV 114
Query: 191 -PRRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEA 245
P + ++ + + G + E+ E+ G++ + ++ + ++ + K G++D+A
Sbjct: 115 RPVVYDFAYLLQLCG--KKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDA 172
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
+ +F+++ +D+ SW +I GYAQNG + AL+LF +M G++ D + VS+ A A +
Sbjct: 173 FKVFERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSILPAVADI 232
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
L G+ + ++ GF+S +SV NAL+ MY +CG + L F VSWNT+I
Sbjct: 233 KDLRIGKSIHGYALRLGFESKVSVINALLYMYFECGCERIARLVFEGMINKCAVSWNTMI 292
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH---D 422
+AQ +A + F +M+ GV P + ++ L+ C G ++ + L++ D
Sbjct: 293 DGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVHKLVLQKKLD 352
Query: 423 YGIP 426
+ +P
Sbjct: 353 FEVP 356
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%)
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
T +I F K G ++EA +F + + ++ M+ GYA+N +AL + +M G++
Sbjct: 56 TKLINMFFKHGSINEASLVFDTVEHKQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVR 115
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
P F L C L++GR+ + VI +GF+ DL ++ Y KCG I D+
Sbjct: 116 PVVYDFAYLLQLCGKKFELEKGREIHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKV 175
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
F + S+ D+VSW ++IA +AQ+ +A F +M G++ D +T +S+L
Sbjct: 176 FERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKADSVTLVSIL 226
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
F DVY A I +++ G AR++FD M + V+TWN+M+ Y G + + +F
Sbjct: 451 FMDNDVYVATALIDMYAKCGATQTARKLFDMMHERHVITWNAMIDGYGTHGLGKEAIDIF 510
Query: 92 DAMPMKNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIK 142
D M + V+ ++ ++++ C + ++E ++F +M E + Y+A++ +
Sbjct: 511 DNMQKEAVIPNDTTFLSVISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAVVDLLGR 570
Query: 143 FGRLCDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGG--GIARARALFDAMPRRNEVSWT 199
G+L A L +EMP P + M+ G K+ + G A LF+ P +E +
Sbjct: 571 AGKLHGAWNLIEEMPIKPGITVLGAML-GACKIHKNVELGEKAADKLFELDP--DEGGYH 627
Query: 200 VMI-NGLVENGLYEEAWELFGRMPQKNV 226
V++ N V ++++ ++ M +K +
Sbjct: 628 VLLANMYVSASMWDKVAKVRTAMEKKGI 655
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 124/462 (26%), Positives = 215/462 (46%), Gaps = 68/462 (14%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMP--TKDVVTWNSMLTAYWHSGFPQHSRALF 91
S D+Y + + +++ G++ A+ +F+ + +D+V WN+M+ A+ S H++ +
Sbjct: 139 SMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAF--SFHALHAQTIH 196
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
M+ AG N + + + NA I + D
Sbjct: 197 SVAQMQQ--------AGVTPNS--STLVSILPTIGQANALHQGKAIHAYYIRNFFFD--- 243
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN--- 208
NVV T ++D Y K + AR +F+ + ++N+V W+ MI G V +
Sbjct: 244 --------NVVLQTALLDMYAKCHL---LFYARKIFNTVNKKNDVCWSAMIGGYVLHDSI 292
Query: 209 ----GLYEEAWELFGRMPQKNVVAS---------------------------------TA 231
LY++ ++G P +A+ +
Sbjct: 293 SDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNS 352
Query: 232 MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
+I+ + K G +D A ++ +D S++ +I+G QNG E+AL +F QM +G+ P
Sbjct: 353 LISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPY 412
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
++L AC+ LA L G + + GF +D S+ NA++ MYSKCG I S F
Sbjct: 413 LETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFD 472
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ DI+SWNT+I + H L +A S F ++ A+G++PD +T +++LS C +G + E
Sbjct: 473 RMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTE 532
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F+ M ++ I PR HY C+VD+++RAG L A I+
Sbjct: 533 GKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQ 574
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
A+T + + ++ A +F QI + WN+MI YA +G ++++ L+ M++ G
Sbjct: 43 AATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG 102
Query: 288 MQPDDLIFVSLFTACASLALLDQGR--QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
+ P + F L AC+SL L GR T+A ++ G DL V+ AL+ MY+KCG +
Sbjct: 103 VTPTNFTFPFLLKACSSLQALQLGRLIHTHAHIL--GLSMDLYVSTALLHMYAKCGHLYQ 160
Query: 346 SELAFGQTSQP--DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
++ F S DIV+WN +IAAF+ H L+ + QM GV P+ T +S+L
Sbjct: 161 AQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTI 220
Query: 404 CRAGKIDE 411
+A + +
Sbjct: 221 GQANALHQ 228
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 203/417 (48%), Gaps = 56/417 (13%)
Query: 87 SRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRL 146
+R +F+ P S NA++ G + D + EA F ++ + +SG +
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALT---A 381
Query: 147 CDAQRLFKE--------MPCP---NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
C A + + E + C N+ ++D Y K G + A +FD M ++
Sbjct: 382 CSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKC---GALMEACLIFDDMEIKDA 438
Query: 196 VSWTVMINGLVENGLYEEAWELF-----------------------------------GR 220
VSW +I +N EE LF GR
Sbjct: 439 VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGR 498
Query: 221 MPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+ + + +A+I +CK G + EA + +++ R SWN +I+G++ +GE A
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENA 558
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
L+ FS+M++ G+ PD+ + ++ CA+LA ++ G+Q + ++K SD+ + + +V M
Sbjct: 559 LSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDM 618
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
YSKCG++ DS + F + + D V+W+ +I A+A H L A F++M V+P+ F
Sbjct: 619 YSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIF 678
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+S+L C G +D+ ++ F M YG+ P+ EHY+C+VD++ R+GQ+ A E+I
Sbjct: 679 ISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIE 735
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 220/531 (41%), Gaps = 127/531 (23%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV N I ++ GN+ A+ +FD MP +DVV+WNSML+ Y +GF + S +F M
Sbjct: 103 DVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMR 162
Query: 96 M---------------------------------------KNVVSWNAMVAGCVQNDMLD 116
+ +VV+ A+V LD
Sbjct: 163 LLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLD 222
Query: 117 EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM-----------------PCP 159
AFN F MPERN+ ++A+I+G+++ R + +L+K M C
Sbjct: 223 HAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCA 282
Query: 160 NVVSY----------------------TVMIDGYVKVKEGGGIARARALFDAMPRRNEVS 197
+ ++ T +D Y K + AR +F+ P S
Sbjct: 283 GLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDR---MVDARKVFNTFPNPTRQS 339
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQK--------------------------------- 224
+I G EA E+F R QK
Sbjct: 340 HNALIVGYARQDQVLEALEIF-RSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLA 398
Query: 225 -------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
N+ + ++ + K G + EA +F + +D SWN +I + QN EE L
Sbjct: 399 VKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETL 458
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
LF M+R+ M+PDD F S+ ACA L+ G + + VIK G D V +A++ MY
Sbjct: 459 ALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMY 518
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
KCG +V++E + + VSWN+II+ F+ A SYF +M+ VGV PD T+
Sbjct: 519 CKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYA 578
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY--ACLVDVMSRAGQLQ 446
++L +C ++ + ++ + S+ Y + +VD+ S+ G +Q
Sbjct: 579 TVLDICANLATVELGKQIHGQILK---LQLHSDVYIASTIVDMYSKCGNMQ 626
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 199/419 (47%), Gaps = 52/419 (12%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
V+ +N + + + N+ A VFDKMP +DV++WN+M+ Y G + ++ LFD+MP
Sbjct: 73 VFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPE 132
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMI---SGFIKFGRLCDA 149
++VVSWN+M++ +QN ++ F M + + A++ ++ +G +G
Sbjct: 133 RDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQV 192
Query: 150 QRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
L +M +VV+ T ++D Y K+ + A +F MP RN V W+ +I G V N
Sbjct: 193 HCLAIQMGFDSDVVTGTALVDMYSTCKK---LDHAFNIFCEMPERNSVCWSAVIAGYVRN 249
Query: 209 GLYEEAWELFGRMPQKNV---------------------------------------VAS 229
+ E +L+ M + + +
Sbjct: 250 DRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVG 309
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
TA + + K ++ +A +F S N +I GYA+ + EAL +F + ++ +
Sbjct: 310 TATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLD 369
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
D++ TAC+++ +G Q + L +K G D ++ V N ++ MY+KCG+++++ L
Sbjct: 370 FDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLI 429
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGK 408
F D VSWN IIAA Q+ + + F M+ + PD TF S++ C AGK
Sbjct: 430 FDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKAC--AGK 486
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 157/360 (43%), Gaps = 49/360 (13%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
N ++ + K L A +F +MP +V+S+ MI GY V G + A+ LFD+MP R
Sbjct: 77 NCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGV---GNMEFAQFLFDSMPER 133
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMP------------------------------- 222
+ VSW M++ ++NG + ++ E+F +M
Sbjct: 134 DVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVH 193
Query: 223 --------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
+VV TA++ + K+D A+ +F ++ R+ W+ +I GY +N R
Sbjct: 194 CLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFT 253
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
E L L+ M+ GM F S F +CA L+ + G Q +A +K F D V A +
Sbjct: 254 EGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATL 313
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
MY+KC +VD+ F P S N +I +A+ +A F + + D I
Sbjct: 314 DMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEI 373
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVH---DYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ L+ C E + L L V D+ I + ++D+ ++ G L AC I
Sbjct: 374 SLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANT----ILDMYAKCGALMEACLI 429
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 288 MQP-DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
M P L F +F C++L ++ G+Q +A + GF + V+N L+ Y KC ++ +
Sbjct: 33 MNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYA 92
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F + Q D++SWNT+I +A A+ FD M D +++ S+LS +
Sbjct: 93 FNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSM----PERDVVSWNSMLSCYLQN 148
Query: 407 GKIDESMNLFNLM-----VHDYG 424
G +S+ +F M HDY
Sbjct: 149 GFHRKSIEIFTKMRLLEIQHDYA 171
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 203/417 (48%), Gaps = 56/417 (13%)
Query: 87 SRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRL 146
+R +F+ P S NA++ G + D + EA F ++ + +SG +
Sbjct: 325 ARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALT---A 381
Query: 147 CDAQRLFKE--------MPCP---NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
C A + + E + C N+ ++D Y K G + A +FD M ++
Sbjct: 382 CSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKC---GALMEACLIFDDMEIKDA 438
Query: 196 VSWTVMINGLVENGLYEEAWELF-----------------------------------GR 220
VSW +I +N EE LF GR
Sbjct: 439 VSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGR 498
Query: 221 MPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+ + + +A+I +CK G + EA + +++ R SWN +I+G++ +GE A
Sbjct: 499 VIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENA 558
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
L+ FS+M++ G+ PD+ + ++ CA+LA ++ G+Q + ++K SD+ + + +V M
Sbjct: 559 LSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDM 618
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
YSKCG++ DS + F + + D V+W+ +I A+A H L A F++M V+P+ F
Sbjct: 619 YSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIF 678
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+S+L C G +D+ ++ F M YG+ P+ EHY+C+VD++ R+GQ+ A E+I
Sbjct: 679 ISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIE 735
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 220/531 (41%), Gaps = 127/531 (23%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV N I ++ GN+ A+ +FD MP +DVV+WNSML+ Y +GF + S +F M
Sbjct: 103 DVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMR 162
Query: 96 M---------------------------------------KNVVSWNAMVAGCVQNDMLD 116
+ +VV+ A+V LD
Sbjct: 163 LLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLD 222
Query: 117 EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM-----------------PCP 159
AFN F MPERN+ ++A+I+G+++ R + +L+K M C
Sbjct: 223 HAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCA 282
Query: 160 NVVSY----------------------TVMIDGYVKVKEGGGIARARALFDAMPRRNEVS 197
+ ++ T +D Y K + AR +F+ P S
Sbjct: 283 GLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDR---MVDARKVFNTFPNPTRQS 339
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQK--------------------------------- 224
+I G EA E+F R QK
Sbjct: 340 HNALIVGYARQDQVLEALEIF-RSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLA 398
Query: 225 -------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
N+ + ++ + K G + EA +F + +D SWN +I + QN EE L
Sbjct: 399 VKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETL 458
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
LF M+R+ M+PDD F S+ ACA L+ G + + VIK G D V +A++ MY
Sbjct: 459 ALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMY 518
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
KCG +V++E + + VSWN+II+ F+ A SYF +M+ VGV PD T+
Sbjct: 519 CKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYA 578
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY--ACLVDVMSRAGQLQ 446
++L +C ++ + ++ + S+ Y + +VD+ S+ G +Q
Sbjct: 579 TVLDICANLATVELGKQIHGQILK---LQLHSDVYIASTIVDMYSKCGNMQ 626
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 199/419 (47%), Gaps = 52/419 (12%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
V+ +N + + + N+ A VFDKMP +DV++WN+M+ Y G + ++ LFD+MP
Sbjct: 73 VFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPE 132
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMI---SGFIKFGRLCDA 149
++VVSWN+M++ +QN ++ F M + + A++ ++ +G +G
Sbjct: 133 RDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQV 192
Query: 150 QRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
L +M +VV+ T ++D Y K+ + A +F MP RN V W+ +I G V N
Sbjct: 193 HCLAIQMGFDSDVVTGTALVDMYSTCKK---LDHAFNIFCEMPERNSVCWSAVIAGYVRN 249
Query: 209 GLYEEAWELFGRMPQKNV---------------------------------------VAS 229
+ E +L+ M + + +
Sbjct: 250 DRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVG 309
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
TA + + K ++ +A +F S N +I GYA+ + EAL +F + ++ +
Sbjct: 310 TATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLD 369
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
D++ TAC+++ +G Q + L +K G D ++ V N ++ MY+KCG+++++ L
Sbjct: 370 FDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLI 429
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGK 408
F D VSWN IIAA Q+ + + F M+ + PD TF S++ C AGK
Sbjct: 430 FDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKAC--AGK 486
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 157/360 (43%), Gaps = 49/360 (13%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
N ++ + K L A +F +MP +V+S+ MI GY V G + A+ LFD+MP R
Sbjct: 77 NCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGV---GNMEFAQFLFDSMPER 133
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMP------------------------------- 222
+ VSW M++ ++NG + ++ E+F +M
Sbjct: 134 DVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVH 193
Query: 223 --------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
+VV TA++ + K+D A+ +F ++ R+ W+ +I GY +N R
Sbjct: 194 CLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFT 253
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
E L L+ M+ GM F S F +CA L+ + G Q +A +K F D V A +
Sbjct: 254 EGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATL 313
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
MY+KC +VD+ F P S N +I +A+ +A F + + D I
Sbjct: 314 DMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEI 373
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVH---DYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ L+ C E + L L V D+ I + ++D+ ++ G L AC I
Sbjct: 374 SLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANT----ILDMYAKCGALMEACLI 429
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 10/143 (6%)
Query: 288 MQP-DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
M P L F +F C++L ++ G+Q +A + GF + V+N L+ Y KC ++ +
Sbjct: 33 MNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYA 92
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F + Q D++SWNT+I +A A+ FD M D +++ S+LS +
Sbjct: 93 FNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSM----PERDVVSWNSMLSCYLQN 148
Query: 407 GKIDESMNLFNLM-----VHDYG 424
G +S+ +F M HDY
Sbjct: 149 GFHRKSIEIFTKMRLLEIQHDYA 171
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 168/311 (54%), Gaps = 7/311 (2%)
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGG-GIARARALFDAMPRRNEVSWTVMINGLVE 207
A +F + PNV ++ MI GY + + R + + + ++ ++ +
Sbjct: 93 AHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKA-IS 151
Query: 208 NGLYEEAWELFGRMPQKN-----VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
L E+ + +N + +++ + G + A+ +F+ + RD+ +WN
Sbjct: 152 KSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNS 211
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I G+A NG+ EAL+LF +M G++PD VSLF+ACA L L+ GR+ + ++K G
Sbjct: 212 VINGFALNGKPNEALSLFREMSLKGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKVG 271
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
+L VNN+L+ Y+KCGSI +++ F + S+ ++VSW +++ A + +A F
Sbjct: 272 LTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFK 331
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M + P ITF+ +L C G +DE N F M +YGI PR EHY C+VD++SRA
Sbjct: 332 EMERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRA 391
Query: 443 GQLQRACEIIR 453
G ++RA E I+
Sbjct: 392 GLVKRAYEYIQ 402
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 125/302 (41%), Gaps = 56/302 (18%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
++ N + ++ G+ +A +VF+ M +D+V WNS++ + +G P + +LF M +
Sbjct: 175 IFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSVINGFALNGKPNEALSLFREMSL 234
Query: 97 KNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCD 148
K V + ++ + C + L+ + + N N+++ + K G + +
Sbjct: 235 KGVEPDGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGNLHVNNSLLDFYAKCGSIRE 294
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
AQ++F EM NVVS WT ++ GL N
Sbjct: 295 AQQVFSEMSERNVVS----------------------------------WTSLVVGLAVN 320
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGF---CKQ-GKVDEAWTLFQQ------IRCRDIA 258
G EEA LF M ++ +V G C G +DE + F++ IR R I
Sbjct: 321 GFGEEALGLFKEMERQKIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPR-IE 379
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
+ M+ ++ G + A M MQP+ +I+ +L AC L G + +
Sbjct: 380 HYGCMVDLLSRAGLVKRAYEYIQSM---PMQPNAVIWRTLLGACTVHGDLSLGEIARSHL 436
Query: 319 IK 320
+K
Sbjct: 437 LK 438
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 226/440 (51%), Gaps = 33/440 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG--FPQHSRALFDA 93
+V+ N + +SR G + A +VF++M +D+V+WN+ML+ Y G + + LF
Sbjct: 221 EVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGN 280
Query: 94 MPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY----NAMISGFIKFGR 145
M + + VS ++ C L+ + ++ N +IS + K
Sbjct: 281 MVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKV 340
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVM 201
L DA+ +F++M NVVS+T +I + E +LF+AM N+V++ +
Sbjct: 341 LRDAKAVFQDMSARNVVSWTTLIS----IDE----ENVVSLFNAMRVDGVYPNDVTFIGL 392
Query: 202 INGLVENGLYEEAWELFGRM------PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
++ + + +E + G ++NV S ++IT + K + E+ +F+++ +
Sbjct: 393 LHAITIRNMVKEGLMVHGLCLKSCLSSEQNV--SNSLITMYAKFESIQESKKIFEELNYQ 450
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA--LLDQGRQ 313
SWN +I+GYAQNG +EA F ++ ++P+ F S+ A A+ L G++
Sbjct: 451 GTISWNALISGYAQNGLCKEAFLTFLSAIKE-IKPNQYTFGSVLNAIAAAEDISLKHGQR 509
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
++ +IK G ++D V AL+ MY K G+I +S+ F +T + SW +I+A+A+H
Sbjct: 510 CHSHLIKLGLNTDPFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGD 569
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
Y S + ++ G D ITFLS+L+ CCR G +D +F+ MV + I P EHY+
Sbjct: 570 YESVMSLYKEIEREGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYS 629
Query: 434 CLVDVMSRAGQLQRACEIIR 453
+VD++ R G+L A E++
Sbjct: 630 IMVDMLGRVGRLDEAEELMH 649
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 181/385 (47%), Gaps = 33/385 (8%)
Query: 57 RQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP----MKNV--VSWNAMVAGCV 110
+F+K+P + + N + + H P + ++F ++N+ V+ C
Sbjct: 38 HNLFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKACR 97
Query: 111 QNDMLDEAFNYF---AAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVM 167
+L + F R S N+++ + K GR A +F+ + CP++VS+ +
Sbjct: 98 GEFILGAQIHGFVVATGFVSRVTVS-NSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTI 156
Query: 168 IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV 227
+ G+ K + A L + + V++T ++ + +++ LFG VV
Sbjct: 157 LSGFEKSVDALNFACFMHLNGVV--FDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVV 214
Query: 228 A---------STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGR--GEEA 276
A++T + + G +DEA +F ++ RD+ SWN M++GYAQ G G EA
Sbjct: 215 KCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEA 274
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+ LF MVR GM D + +AC L+ G+Q + L K G+ + ++V N L++
Sbjct: 275 VLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLIST 334
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
YSKC + D++ F S ++VSW T+I+ ++V+ S F+ M GV P+ +TF
Sbjct: 335 YSKCKVLRDAKAVFQDMSARNVVSWTTLISIDEENVV-----SLFNAMRVDGVYPNDVTF 389
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVH 421
+ LL + E LMVH
Sbjct: 390 IGLLHAITIRNMVKEG-----LMVH 409
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 184/387 (47%), Gaps = 37/387 (9%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK------NVV 100
+ +AG A VF+ + D+V+WN++L SGF + AL A M + V
Sbjct: 129 YCKAGRFELALCVFEGLSCPDIVSWNTIL-----SGFEKSVDALNFACFMHLNGVVFDPV 183
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY---------NAMISGFIKFGRLCDAQR 151
++ ++ C D D+ F NA+++ + ++G L +A R
Sbjct: 184 TYTTALSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGR 243
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
+F EM ++VS+ M+ GY + E G+ A LF M R + V + G + Y
Sbjct: 244 VFNEMTIRDLVSWNAMLSGYAQEGECYGL-EAVLLFGNMVREGMLLDHVSLTGAISACGY 302
Query: 212 EEAWELFGR----MPQK-----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+ E FG+ + QK +V +I+ + K + +A +FQ + R++ SW
Sbjct: 303 TKNLE-FGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTT 361
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I+ +N ++LF+ M G+ P+D+ F+ L A ++ +G + L +K
Sbjct: 362 LISIDEEN-----VVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSC 416
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
S+ +V+N+L+TMY+K SI +S+ F + + +SWN +I+ +AQ+ L +A F
Sbjct: 417 LSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTFL 476
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKI 409
I ++P+ TF S+L+ A I
Sbjct: 477 SAIKE-IKPNQYTFGSVLNAIAAAEDI 502
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 193/405 (47%), Gaps = 37/405 (9%)
Query: 73 SMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS 132
++ +Y G P +R +FD M +NVV +N M+ V N D+ F M
Sbjct: 58 KLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRP 117
Query: 133 YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG--------------- 177
N + C + K C + Y ++I G V +K G
Sbjct: 118 DN--------YTYPC----VLKACSCSENLRYGLLIHGDV-LKVGLDFNLFVGNGLIAMY 164
Query: 178 ---GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL------FGRMPQKNVVA 228
G + AR +FD M ++ VSW M+ G N +++A E+ +G+ P +A
Sbjct: 165 GKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMA 224
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
S V +F + +++ SWN+MI Y +N +A++L+ QM + +
Sbjct: 225 SLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRV 284
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
+PD + F S+ AC L+ L GR+ + V K +L + N+L+ MY++CG + D++
Sbjct: 285 EPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKR 344
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGK 408
F + D+ SW ++I+A+ A + F +M+ G PD I F+++LS C +G
Sbjct: 345 VFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGL 404
Query: 409 IDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+DE F M DY I PR EHYACLVD++ RAG++ A II+
Sbjct: 405 LDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIK 449
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 60/332 (18%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH------------- 80
++++ N IA + + G + AR+VFD+M KDVV+WNSM+ Y H
Sbjct: 151 DFNLFVGNGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICRE 210
Query: 81 --------------SGFPQ----------HSRALFDAMPMKNVVSWNAMVAGCVQNDMLD 116
S P + +F + KN++SWN M+ ++N +
Sbjct: 211 MEDYGQKPDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPT 270
Query: 117 EAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLF----KEMPCPNVVSYTVMI 168
+A + + M E +A ++ +++ L +R+ K+ CPN++ +I
Sbjct: 271 QAVDLYLQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLI 330
Query: 169 DGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK---- 224
D Y + G + A+ +FD M R+ SWT +I+ G A LF M
Sbjct: 331 DMYARC---GCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAP 387
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIR-----CRDIASWNIMITGYAQNGRGEEALNL 279
+ +A A+++ G +DE F+Q+ I + ++ + GR +EA N+
Sbjct: 388 DSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNI 447
Query: 280 FSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
QM ++P++ ++ +L ++C +D G
Sbjct: 448 IKQM---PIEPNERVWATLLSSCRVFTNMDIG 476
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/558 (26%), Positives = 243/558 (43%), Gaps = 121/558 (21%)
Query: 14 TPSSTARHTHFLLVFAKHFS-SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWN 72
T AR H LL+ + S S + N I+ +SR G++ A QVFDKMP + V++N
Sbjct: 22 TSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMPQRTHVSYN 81
Query: 73 SMLTAYWHSGFPQHSRALFDA-MPMKNV-------------------------------- 99
++L AY QH F+ M+N+
Sbjct: 82 ALLAAYSRVS-EQHCVYAFNLYTQMENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKS 140
Query: 100 VSWNAMVAGCVQNDMLD---------EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQ 150
+ + + CVQ +L+ A + F M ER+ ++N++I G++K ++
Sbjct: 141 LKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGV 200
Query: 151 RLFKEMP----CPNVVSYTVMIDGYVKVKE------------------------------ 176
LF EM P V ++ +++ ++K+
Sbjct: 201 YLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMY 260
Query: 177 --GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF---------------- 218
G A +F M + + VSW MI+G EN E+A LF
Sbjct: 261 CNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYTY 320
Query: 219 -------GRMP-----------------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
G P ++V + +++ + K + + A +F I
Sbjct: 321 AGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPG 380
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
+D W MITGY++ G A+ FS+M + DD + + + CA LA+L QG
Sbjct: 381 KDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEII 440
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ K G+D ++SV+ +L+ MY+K G++ + L F Q S PD+ WN+++ F+ H +
Sbjct: 441 HCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMV 500
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
A F+++I G+ PD +TFLSLLS C + +++ L+N M G+ P +HY+C
Sbjct: 501 DDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLLWNYM-SSIGLVPGPKHYSC 559
Query: 435 LVDVMSRAGQLQRACEII 452
+V ++SRA L+ A EII
Sbjct: 560 MVTLLSRAALLEEAEEII 577
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 179/367 (48%), Gaps = 46/367 (12%)
Query: 99 VVSWNAMVAG-CVQNDMLDEAFNYFAAMPERNAASYNAMISGF-----------IKFGRL 146
VSW + ++ C N+ L A + + ++ +I+ I FG
Sbjct: 52 TVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAA 111
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
+V+ T +ID Y K G + AR +FD M RN VSW
Sbjct: 112 LHTHAFKHGFAMNDVMVGTALIDMYAKC---GKLDYARLVFDQMGVRNLVSWNT------ 162
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
MI G+ K G VD+A LF ++ +++ SW ++I G
Sbjct: 163 -------------------------MIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGG 197
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
+ + EEAL F +M G+ PD + +++ +ACA+L L G + LV+K F +
Sbjct: 198 FVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDN 257
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ V N+L+ MY++CG I + F SQ ++VSWN+II FA + L KA S+F M
Sbjct: 258 VKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKK 317
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
G+ P+G+++ S L+ C AG IDE + +F + D+ PR EHY CLVD+ SRAG+L+
Sbjct: 318 EGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLK 377
Query: 447 RACEIIR 453
A ++I+
Sbjct: 378 EAWDVIK 384
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 168/349 (48%), Gaps = 34/349 (9%)
Query: 2 LSSIIVSIALKPTPSS----TARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAAR 57
L +++ + A P+ +S A HTH F F+ DV I +++ G + AR
Sbjct: 90 LITLLSACAHSPSKTSITFGAALHTH---AFKHGFAMNDVMVGTALIDMYAKCGKLDYAR 146
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDE 117
VFD+M +++V+WN+M+ Y +G + LFD +P+KNVVSW ++ G V+ + +E
Sbjct: 147 LVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEE 206
Query: 118 AFNYFAAMPERNA----ASYNAMISGFIKFGRLCDA---QRL-FKEMPCPNVVSYTVMID 169
A F M + A+IS G L RL K+ NV +ID
Sbjct: 207 ALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLID 266
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----N 225
Y + G I AR +FD M +RN VSW +I G NGL ++A F M ++ N
Sbjct: 267 MYARC---GCIELARQVFDGMSQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEGLEPN 323
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRD------IASWNIMITGYAQNGRGEEALNL 279
V+ T+ +T G +DE +F I+ RD I + ++ Y++ GR +EA ++
Sbjct: 324 GVSYTSALTACSHAGLIDEGLKIFADIK-RDHRNSPRIEHYGCLVDLYSRAGRLKEAWDV 382
Query: 280 FSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT--YALVIKHGFDSD 326
+M M P++++ SL AC + ++ + Y + + G DS+
Sbjct: 383 IKKM---PMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSN 428
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/451 (27%), Positives = 212/451 (47%), Gaps = 54/451 (11%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS---------- 101
++ A ++FD++P + +N ++ Y +S P S L+ M ++
Sbjct: 83 DLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLK 142
Query: 102 --------WNAMVA------------GCVQNDMLD---------EAFNYFAAMPERNAAS 132
W + CVQN +L+ A F + ER S
Sbjct: 143 ACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVS 202
Query: 133 YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK-EGGGIARARALFDAMP 191
+N+MI+G+ K GR +A +F+EM + + G + V + G R + M
Sbjct: 203 WNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHM- 261
Query: 192 RRNEVSWTVMINGLVENGLYEE---------AWELFGRMPQKNVVASTAMITGFCKQGKV 242
V + I+ +V N L + A +F +M K+VV+ T MI + G +
Sbjct: 262 ----VVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLI 317
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
D A F Q+ +++ SWN +I + Q G EA++LF +M +G+ +D V++ ++C
Sbjct: 318 DCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSC 377
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
+ + L G+Q ++ + + ++ NA++ MY+KCG++ + F + + VSWN
Sbjct: 378 SHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWN 437
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
II A A H +A F++M A GV PD ITF LLS C +G +D + F +M
Sbjct: 438 VIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLT 497
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+GI P EHYAC+VD++ R G L A +I+
Sbjct: 498 FGISPDVEHYACMVDLLGRRGLLGEAISLIK 528
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 185/410 (45%), Gaps = 54/410 (13%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
V A LNI + G IT+AR+VFD + + +V+WNSM+ Y G + + +F M
Sbjct: 171 VQNAILNI--YVACGLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQE 228
Query: 97 ----KNVVSWNAMVAGCVQNDMLDEA----FNYFAAMPERNAASYNAMISGFIKFGRLCD 148
+V + +++ ++ D + E ++ NA++ + K G L
Sbjct: 229 VGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKC 288
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
A+ +F +M +VVS+T MI+ Y G I A F+ MP +N VSW +I V+
Sbjct: 289 AKSVFDQMLDKDVVSWTCMINAYA---NHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQE 345
Query: 209 GLYEEAWELFGRMPQKNVVAS--------------------------------------- 229
GLY EA +LF RM V+A+
Sbjct: 346 GLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLC 405
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
A+I + K G + A +F + ++ SWN++I A +G G+EA+ +F +M +G+
Sbjct: 406 NAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVC 465
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALV-IKHGFDSDLSVNNALVTMYSKCGSIVDS-E 347
PD++ F L +AC+ L+D G+ + ++ + G D+ +V + + G + ++
Sbjct: 466 PDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAIS 525
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
L +PD+V W+ ++ A + + Q++ +G G+ L
Sbjct: 526 LIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVL 575
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 162/352 (46%), Gaps = 28/352 (7%)
Query: 6 IVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT 65
++S++ K R H +V D N + +++ GN+ A+ VFD+M
Sbjct: 241 LLSVSTKHGNFDLGRFVHLHMVVTG--IEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLD 298
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
KDVV+W M+ AY + G + F+ MP KNVVSWN+++ VQ + EA + F M
Sbjct: 299 KDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRM 358
Query: 126 PER----NAASYNAMISGFIKFGRLCDAQR----LFKEMPCPNVVSYTVMIDGYVKVKEG 177
+ N + A++S G L ++ +F + +ID Y K
Sbjct: 359 CDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKC--- 415
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMI 233
G + A +F MP +N VSW V+I L +G +EA E+F +M V + T ++
Sbjct: 416 GALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLL 475
Query: 234 TGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+ G VD F+ + D+ + M+ + G EA++L +M +
Sbjct: 476 SACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEAISLIKKM---PV 532
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHG-FDSDLSVNNALVTMYSK 339
+PD +++ +L AC + L G+Q +++ G ++S L V L MYS+
Sbjct: 533 KPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYV--LLSNMYSE 582
>Medtr7g084830.1 | PPR containing plant-like protein | HC |
chr7:32742835-32744848 | 20130731
Length = 476
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 189/402 (47%), Gaps = 60/402 (14%)
Query: 48 SRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVA 107
S G I A VFD++ D+ TWN M+ AY SG +P K++ + M+
Sbjct: 63 SSYGKIDYASLVFDQLNDPDIFTWNVMIRAYNTSG-----------LPQKSIFLFKDMIC 111
Query: 108 GCVQNDMLDEAFNYFAAMPERNAASYNAMI-SGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
C L + F Y + NA I SG I FGRL
Sbjct: 112 -C---GFLPDKFTYPFVI--------NACIASGVIDFGRLTH------------------ 141
Query: 167 MIDGYVKVKEGGGIARARALF-DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKN 225
G+A + D + N ++ I G V++G W++F +M +N
Sbjct: 142 ------------GLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDG-----WKVFDKMRVRN 184
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
VV+ T +I G GK+D A +F++I +++ SW MI GY +N +A +LF +M+
Sbjct: 185 VVSWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLI 244
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
++P++ VSL AC L L GR+ + +K+GF+ + ALV MYSKCGS+
Sbjct: 245 DNVRPNEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDA 304
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
+ FG ++ +WNT++ +F H + F +M GV PD ITF+ +LS C +
Sbjct: 305 AVKVFGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQ 364
Query: 406 AGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
++ F+LM Y + P EHY C+V + +RA +L
Sbjct: 365 INDLELGQKYFSLMTEHYSLTPILEHYTCMVGLYTRANELNE 406
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 16/227 (7%)
Query: 19 ARHTHFLLVFAKHFSSYDVY-RANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTA 77
R TH L + +S DVY + N+ F G++ +VFDKM ++VV+W +++
Sbjct: 137 GRLTHGLAIKMGFWS--DVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSWTTVIAG 194
Query: 78 YWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI 137
G +R +F+ +P KNVVSW AM+ G V+ND +AF+ F M N +
Sbjct: 195 LVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTL 254
Query: 138 SGFIK----FGRLCDAQRLFKEMPCPNVVSY-----TVMIDGYVKVKEGGGIARARALFD 188
IK G L +R+ + N T ++D Y K G + A +F
Sbjct: 255 VSLIKACTDLGSLKLGRRM-HDFALKNGFELGPFLGTALVDMYSKC---GSLDAAVKVFG 310
Query: 189 AMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITG 235
M RN +W M+ +G E +LF M + VV G
Sbjct: 311 LMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVG 357
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%)
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFA 369
Q +Q +A +I+ D + L + S G I + L F Q + PDI +WN +I A+
Sbjct: 35 QLKQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQLNDPDIFTWNVMIRAYN 94
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
L K+ F MI G PD T+ +++ C +G ID
Sbjct: 95 TSGLPQKSIFLFKDMICCGFLPDKFTYPFVINACIASGVID 135
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV--- 100
+ +S+ G++ AA +VF M +++ TWN+MLT++ GF LF M VV
Sbjct: 293 VDMYSKCGSLDAAVKVFGLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDA 352
Query: 101 -SWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS-----YNAMISGFIKFGRLCDAQRLFK 154
++ +++ CVQ + L+ YF+ M E + + Y M+ + + L + + L
Sbjct: 353 ITFVGVLSACVQINDLELGQKYFSLMTEHYSLTPILEHYTCMVGLYTRANELNEIRTLGD 412
Query: 155 EM 156
M
Sbjct: 413 TM 414
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 121/386 (31%), Positives = 193/386 (50%), Gaps = 44/386 (11%)
Query: 85 QHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGF 140
+ + +++ M K+VV+WNAMV G QN ++A + F M E + +++++ISG+
Sbjct: 2 EDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGY 61
Query: 141 IKFGRLCDAQRLFKEM---PC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
+ G C+A +F++M C PNVV+ ++ G V G + +
Sbjct: 62 AQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASV---GALLHGK------------ 106
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKN--VVASTAMITGFCKQGKVDEAWTLFQQI-- 252
E Y + L G N + A+I + K ++ A +F +I
Sbjct: 107 ----------ETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICP 156
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMVR--TGMQPDDLIFVSLFTACASLALLDQ 310
+ RD+ +W +MI GYAQ G AL LFS+M + + P+D + ACA LA L
Sbjct: 157 KDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRF 216
Query: 311 GRQTYALVIKHG-FDSD-LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
G+Q +A V++ DSD L V N L+ MYSK G + +++ F S+ + +SW +++ +
Sbjct: 217 GKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGY 276
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
H A FD+M + DGITFL +L C +G +D ++LF M D+ + P
Sbjct: 277 GMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPG 336
Query: 429 SEHYACLVDVMSRAGQLQRACEIIRL 454
EHYAC+ D+ RAG+L CE RL
Sbjct: 337 VEHYACMADLFGRAGRL---CEATRL 359
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 164/387 (42%), Gaps = 79/387 (20%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQ 111
A +V+++M KDVVTWN+M+T Y +G + + +LF M + +VV+W+++++G Q
Sbjct: 4 ASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQ 63
Query: 112 NDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGRLCDAQRLFKEMPC--------- 158
EA + F M N + +++SG G L KE C
Sbjct: 64 RGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHG----KETHCYSIKFILKG 119
Query: 159 ------PNVVSYTVMIDGYVKVKEGGGIARARALFDAM-PR-RNEVSWTVMINGLVENGL 210
++ +ID Y K K + ARA+FD + P+ R+ V+WTVMI G + G
Sbjct: 120 EHNDDNDDLAGINALIDMYAKCK---SLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGD 176
Query: 211 YEEAWELFGRM--------PQKNVVASTAM------------------------------ 232
A +LF M P ++ M
Sbjct: 177 ANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLF 236
Query: 233 -----ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
I + K G VD A +F + R+ SW ++TGY +G E+A +F +M +
Sbjct: 237 VANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEA 296
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN--ALVTMYSKCGSIVD 345
+ D + F+ + AC+ ++D+G + + K F D V + + ++ + G + +
Sbjct: 297 LVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKD-FVVDPGVEHYACMADLFGRAGRLCE 355
Query: 346 SELAFGQTS-QPDIVSWNTIIAAFAQH 371
+ S +P V W +++A H
Sbjct: 356 ATRLINDMSMEPTPVVWIALLSACRTH 382
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 59/260 (22%)
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS-------------------- 281
+++A +++++R +D+ +WN M+TGY+QNGR E+AL+LF
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISG 60
Query: 282 ---------------QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK------ 320
QM +P+ + +SL + CAS+ L G++T+ IK
Sbjct: 61 YAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGE 120
Query: 321 HGFDS-DLSVNNALVTMYSKCGSIVDSELAFGQT--SQPDIVSWNTIIAAFAQHVLYYKA 377
H D+ DL+ NAL+ MY+KC S+ + F + D+V+W +I +AQ+ A
Sbjct: 121 HNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHA 180
Query: 378 RSYFDQMIAVG--VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA-- 433
F +M + P+ T +L C R + F +H Y + RS +
Sbjct: 181 LQLFSEMFKFDNCIVPNDFTISCVLMACARLAAL-----RFGKQIHAY-VLRRSRIDSDV 234
Query: 434 -----CLVDVMSRAGQLQRA 448
CL+D+ S++G + A
Sbjct: 235 LFVANCLIDMYSKSGDVDTA 254
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
+ H ++ S ++ AN I +S++G++ A+ VFD M ++ ++W S+LT Y
Sbjct: 217 GKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGY 276
Query: 79 WHSGFPQHSRALFDAMPMKNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPER-----N 129
G + + +FD M + +V ++ ++ C + M+D + F M +
Sbjct: 277 GMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPG 336
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEM---PCPNV 161
Y M F + GRLC+A RL +M P P V
Sbjct: 337 VEHYACMADLFGRAGRLCEATRLINDMSMEPTPVV 371
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 206/444 (46%), Gaps = 54/444 (12%)
Query: 60 FDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAF 119
F DV +S + + G ++R +FD KN WN M+ VQN+ EA
Sbjct: 250 FGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAI 309
Query: 120 NYF--AAMPERNAASYNAMISGFIKFGRLCDAQR-------LFKEMPCPNVVSYTVMIDG 170
+ F A E ++S +L + + K +P ++ ++
Sbjct: 310 DVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVM 369
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NV 226
Y + + + +FD M R+ VSW +I+ V+NG EEA L M ++ +
Sbjct: 370 YSRCNH---VDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDS 426
Query: 227 VASTAMITG----------------------------------FCKQGKVDEAWTLFQQI 252
V +TA+++ + K G + A LF+Q
Sbjct: 427 VTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYAKSGSIRTAELLFEQ- 485
Query: 253 RC---RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
C RD A+WN +I GY QNG E+A+ L QM+ + P+ + S+ AC+S+ +
Sbjct: 486 NCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMG 545
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFA 369
RQ + I+ + ++ V +L YSKCG+I +E F +T + + V++ T++ +
Sbjct: 546 LARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNSVTYTTMMMCYG 605
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRS 429
QH + +A + +D M+ G+RPD +TF+++LS C +G +DE + +F M + I P
Sbjct: 606 QHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSI 665
Query: 430 EHYACLVDVMSRAGQLQRACEIIR 453
EHY C+ D++ R G++ A E ++
Sbjct: 666 EHYCCVADMLGRVGRVVEAYEFVK 689
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 173/395 (43%), Gaps = 61/395 (15%)
Query: 69 VTWNSMLTAYWHSGFPQHSRAL--FDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
+ +NS+L Y QH AL FD M +NVV+WN ++ V+ + +A FA M
Sbjct: 157 IVYNSLLNMYASC---QHEYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMI 213
Query: 127 ERNA-ASYNAMISGFIKFGRLCDAQ---------RLFKEMPCPNVVSYTVMIDGYVKVKE 176
++ S ++ F +L D++ R F + +V V+ + +
Sbjct: 214 NQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVF---VVSSAILMFSD 270
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------------------ 218
G + AR +FD +N W MI V+N EA ++F
Sbjct: 271 VGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLS 330
Query: 219 ----------------------GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+P ++ A++ + + VD + +F ++ RD
Sbjct: 331 VLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERD 390
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
SWN +I+ + QNG EEAL L +M + D + +L +A ++L L G+QT+A
Sbjct: 391 AVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHA 450
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ--TSQPDIVSWNTIIAAFAQHVLY 374
+I+ G + + + L+ MY+K GSI +EL F Q +S D +WN IIA + Q+ L
Sbjct: 451 YLIRRGIQFE-GMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLN 509
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
KA QM+ V P+ +T S+L C G +
Sbjct: 510 EKAILLLKQMLVQNVIPNAVTLASILPACSSMGSM 544
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 182/456 (39%), Gaps = 83/456 (18%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
++ R G A + D +P V WNS++ + + P + L+ M
Sbjct: 56 LSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSN------ 109
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS 163
+ C D + A ++ + A+ S F++ + P+ +
Sbjct: 110 ---SSCSTFDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTG--------PSRIV 158
Query: 164 YTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ 223
Y +++ Y + A +FD M RRN V+W +I V+ Y +A E F M
Sbjct: 159 YNSLLNMYASCQH----EYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMIN 214
Query: 224 KNVVAS-------------------TAMITGFCKQGK---------VDEAWTLFQQIRCR 255
++V+ S M GF ++ V A +F + C
Sbjct: 215 QSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCM 274
Query: 256 DIAS-------------WNIMITGYAQNGRGEEALNLFSQMVRTGMQP-DDLIFVSLFTA 301
D A WN MI Y QN EA+++F Q + + DD+ +S+ TA
Sbjct: 275 DYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTA 334
Query: 302 CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
+ L + Q +A VIK S + + NA++ MYS+C + S F + + D VSW
Sbjct: 335 VSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSW 394
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV- 420
NTII+AF Q+ +A +M D +T +LLS + NL NL V
Sbjct: 395 NTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSA---------ASNLRNLYVG 445
Query: 421 ---HDY----GIPPRS-EHYACLVDVMSRAGQLQRA 448
H Y GI E Y L+D+ +++G ++ A
Sbjct: 446 KQTHAYLIRRGIQFEGMESY--LIDMYAKSGSIRTA 479
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/436 (27%), Positives = 221/436 (50%), Gaps = 25/436 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM- 94
DV N I +++ G+I AR VFDKMP KD ++WN+M+ + +G LF M
Sbjct: 234 DVDVINALITMYAKCGDIDTARLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMI 293
Query: 95 --PMK-NVVSWNAMVAGC--VQNDMLDEAFNYFAAMPE--RNAASYNAMISGFIKFGRLC 147
P+ ++++ +++ C + ++ L + + + R+ + YN++I + G +
Sbjct: 294 EYPVDPDLMTMTSVITACELIGDERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVE 353
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYV------KVKEGGGIARARALFDAMPRRNEVSWTVM 201
+A+++F + C +VV +T MI GY K E + A + +E++ V+
Sbjct: 354 EAEKVFSQTECRDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIP-----DEITIGVV 408
Query: 202 INGLVENGLYEEAWELFGRMPQKN----VVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
++ + L + + V+ + +I + K +D+A +F IR ++I
Sbjct: 409 LSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVFHSIRDKNI 468
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SW +I G N R +AL F +M+R +P+ + V + +ACA + G++ +A
Sbjct: 469 ISWTSIILGLRINNRCYDALFFFKEMMRR-QKPNWVTLVCVLSACARIGAFTCGKEIHAY 527
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
++ G D + NA++ MY +CG + + F Q D+ +WN ++ +A+ A
Sbjct: 528 ALRTGVSDDGYMPNAVLDMYVRCGRMEYAWKQFFSIDQ-DVSTWNILLTGYAERGKGTLA 586
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
F +M+ V P+ +TF+S+L C R+G + E + ++ M + Y I P +HYAC+VD
Sbjct: 587 TELFRRMLESNVVPNEVTFISILCACSRSGMVAEGLEYYDSMKYKYSIKPNLKHYACVVD 646
Query: 438 VMSRAGQLQRACEIIR 453
++ RAG+L+ A E I+
Sbjct: 647 LLGRAGKLEDAYEFIQ 662
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 156/353 (44%), Gaps = 58/353 (16%)
Query: 115 LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE-------------MPCPNV 161
LD A +Y +M E + +I RLC+ +R KE M +V
Sbjct: 78 LDSAMSYLESMHELKISVEE---DSYIALVRLCEWKRARKEGSRVWSYITKSKMMTHLSV 134
Query: 162 VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM 221
V++ +VK G + A +F MP RN SW V++ G + G ++EA L+ RM
Sbjct: 135 KLGNVLLSMFVKF---GNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRM 191
Query: 222 P---------------------------------------QKNVVASTAMITGFCKQGKV 242
+ +V A+IT + K G +
Sbjct: 192 LWVGVRPDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDI 251
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
D A +F ++ +D SWN MI G +NG E L LF +M+ + PD + S+ TAC
Sbjct: 252 DTARLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITAC 311
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
+ GR+ + V++ F D SV N+L+ MYS G + ++E F QT D+V W
Sbjct: 312 ELIGDERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWT 371
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
+I+ + ++++ KA + M A G+ PD IT +LS C +D MNL
Sbjct: 372 AMISGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNL 424
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 180/428 (42%), Gaps = 91/428 (21%)
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM------ 156
N +++ V+ L +A+ F MPERN S+N ++ G+ K G +A L+ M
Sbjct: 138 NVLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVR 197
Query: 157 ------PC--------PNVVS-------------------YTVMIDGYVKVKEGGGIARA 183
PC P++V +I Y K G I A
Sbjct: 198 PDVYTFPCVLRTCGGVPDLVKGREIHVHVLRFGFESDVDVINALITMYAKC---GDIDTA 254
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITG---- 235
R +FD MP+++ +SW MI G ENG E LF RM + +++ T++IT
Sbjct: 255 RLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELI 314
Query: 236 -------------------------------FCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
+ G V+EA +F Q CRD+ W MI
Sbjct: 315 GDERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMI 374
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
+GY N ++AL + M G+ PD++ + +AC+ L LD G + K G
Sbjct: 375 SGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLI 434
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+ V N L+ MY+KC I + F +I+SW +II + Y A +F +M
Sbjct: 435 FYVIVANKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEM 494
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKID--ESMNLFNLM--VHDYGIPPRSEHYACLVDVMS 440
+ +P+ +T + +LS C R G + ++ + L V D G P + ++D+
Sbjct: 495 MRRQ-KPNWVTLVCVLSACARIGAFTCGKEIHAYALRTGVSDDGYMPNA-----VLDMYV 548
Query: 441 RAGQLQRA 448
R G+++ A
Sbjct: 549 RCGRMEYA 556
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 164/370 (44%), Gaps = 23/370 (6%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
R H ++ K VY N I +S G + A +VF + +DVV W +M++ Y
Sbjct: 320 GREIHGYVMRTKFSRDPSVY--NSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGY 377
Query: 79 WHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY- 133
++ Q + + M + + ++ +++ C LD N + Y
Sbjct: 378 ENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYV 437
Query: 134 ---NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM 190
N +I + K + A +F + N++S+T +I G ++ A F M
Sbjct: 438 IVANKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILG---LRINNRCYDALFFFKEM 494
Query: 191 PRRNEVSWTVMI---NGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVD 243
RR + +W ++ + G + E+ + V A++ + + G+++
Sbjct: 495 MRRQKPNWVTLVCVLSACARIGAFTCGKEIHAYALRTGVSDDGYMPNAVLDMYVRCGRME 554
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
AW F I +D+++WNI++TGYA+ G+G A LF +M+ + + P+++ F+S+ AC+
Sbjct: 555 YAWKQFFSID-QDVSTWNILLTGYAERGKGTLATELFRRMLESNVVPNEVTFISILCACS 613
Query: 304 SLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSW 361
++ +G + Y ++ K+ +L +V + + G + D+ E +PD W
Sbjct: 614 RSGMVAEGLEYYDSMKYKYSIKPNLKHYACVVDLLGRAGKLEDAYEFIQKIPMKPDPAVW 673
Query: 362 NTIIAAFAQH 371
++ A H
Sbjct: 674 GALLNACRIH 683
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 214/428 (50%), Gaps = 16/428 (3%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHS----RALFDAMP 95
N + + + G+ A ++VFD+M ++ V+WN+++T + G + R++ +
Sbjct: 275 GNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGM 334
Query: 96 MKNVVSWNAMVAGCVQNDMLD---EAFNYFAAMP-ERNAASYNAMISGFIKFGRLCDAQR 151
N V+ ++M+ + + E Y M E + N++I + K G A
Sbjct: 335 RPNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVAST 394
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEG-GGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
+F +M N+VS+ M+ + + + + R + N V++T ++ G
Sbjct: 395 IFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGF 454
Query: 211 YEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
E+ R+ Q ++ S A+ + K G + A +F + +D S+NI+I G
Sbjct: 455 LNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARNVFN-VSIKDKVSYNILIIG 513
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
Y+Q E+LNLFS+M +GM PD + F+ + +ACA L+ + QG++ + +++ F +
Sbjct: 514 YSQTTNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKLFHTH 573
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
L N+L+ +Y+KCG I + F + D+ SWNT+I + + A + F+ M
Sbjct: 574 LFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAMKE 633
Query: 387 -VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
GV D ++++++LS C G I++ F M DY I P HYAC+VD++ RAGQ+
Sbjct: 634 DGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQM-QDYNIEPTHTHYACMVDLLGRAGQI 692
Query: 446 QRACEIIR 453
+ A +IR
Sbjct: 693 EEAANLIR 700
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 196/444 (44%), Gaps = 58/444 (13%)
Query: 59 VFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEA 118
VF KDV N++L Y + GF + +FD M ++ VSWN ++ C +E+
Sbjct: 160 VFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRGFHEES 219
Query: 119 FNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG- 177
+F M +++ D++ + V + V + G+VKV
Sbjct: 220 LCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYV-FKVGLSGHVKVGNAL 278
Query: 178 -------GGIARARALFDAMPRRNEVSWTVMING-------------------------- 204
G + +FD M RNEVSW +I G
Sbjct: 279 VDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNP 338
Query: 205 ---------LVENGLYEEAWELFG---RMP-QKNVVASTAMITGFCKQGKVDEAWTLFQQ 251
L E GL++ E+ G RM + ++ ++I + K G A T+F +
Sbjct: 339 VTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNK 398
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+ R+I SWN M+ +AQN A+ L QM G P+++ F ++ ACA L L+ G
Sbjct: 399 MGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVG 458
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
++ +A +I+ G +DL ++NAL MYSKCG + + F S D VS+N +I ++Q
Sbjct: 459 KEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARNVF-NVSIKDKVSYNILIIGYSQT 517
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV----HDYGIPP 427
++ + F +M G+ PD ++F+ ++S C I + + +V H +
Sbjct: 518 TNSSESLNLFSEMRLSGMTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKLFHTHLFAA 577
Query: 428 RSEHYACLVDVMSRAGQLQRACEI 451
S L+D+ ++ G++ A ++
Sbjct: 578 NS-----LLDLYTKCGRIDLATKV 596
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 102/199 (51%), Gaps = 13/199 (6%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN +I Y+ G + +++ MVR+G++PDD + + AC+ D+GR+ + +V
Sbjct: 103 WNTLIRAYSIAGF-FDGFGVYNTMVRSGVKPDDHTYPFVLKACSDYLKFDKGREVHGVVF 161
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
K GFD D+ V N L+ Y CG VD+ F + + D VSWNT+I + + ++
Sbjct: 162 KVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRGFHEESLC 221
Query: 380 YFDQMIAVG--VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY----GIPPRSEHYA 433
+F +M+ VRPD +T +S+L VC D + +VH Y G+ +
Sbjct: 222 FFKEMVVAAPVVRPDLVTVVSVLPVCA-----DSENVVMARIVHGYVFKVGLSGHVKVGN 276
Query: 434 CLVDVMSRAGQLQRACEII 452
LVDV + G + AC+ +
Sbjct: 277 ALVDVYGKCGS-EEACKKV 294
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
++ AN + +++ G I A +VFD++ KDV +WN+M+ Y G + + LF+AM
Sbjct: 574 LFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAMKE 633
Query: 97 K-----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN----AASYNAMISGFIKFGRLC 147
+ VS+ A+++ C ++++ YF M + N Y M+ + G++
Sbjct: 634 DGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQDYNIEPTHTHYACMVDLLGRAGQIE 693
Query: 148 DAQRLFKEM 156
+A L + +
Sbjct: 694 EAANLIRGL 702
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 204/420 (48%), Gaps = 13/420 (3%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
+S+ + A +V + P DV W ++++ + + + + ++F M + ++ N
Sbjct: 263 YSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTY 322
Query: 107 AGCVQNDM------LDEAFNYFAAMPERNAASY--NAMISGFIKFGRLC-DAQRLFKEMP 157
+ + L E F+ + Y NA++ ++K + +A ++F+E+
Sbjct: 323 SSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREIT 382
Query: 158 CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL 217
PNV+ +T +I G+ + + + A R N + + ++ + L
Sbjct: 383 SPNVMCWTSLIAGFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMML 442
Query: 218 FGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
G + + ++ + A++ + G +DEAW++ + RD ++ + Q G
Sbjct: 443 HGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHH 502
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
AL + M G++ D+ S +A A L ++ G+Q + +K GF SV+N+L
Sbjct: 503 GMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSL 562
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
V +YSKCGSI D+ AF S+PD SWN +I+ F+ + L A S FD M GV+PD
Sbjct: 563 VHLYSKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDS 622
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
IT LSL+S C G ++ + F+ M +Y I P+ +HY CLVD++ R G+L+ A +I
Sbjct: 623 ITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIE 682
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 212/470 (45%), Gaps = 90/470 (19%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA--LFD 92
+D+Y N ++ +++ + AR +FD+MP +DVV+W ++L++ H+ HS A LFD
Sbjct: 47 HDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSS--HTKTKHHSDALQLFD 104
Query: 93 AM----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCD 148
M N + ++ + C A F ER + + + ++ R
Sbjct: 105 MMIGSGEYPNEFTLSSALRSCF-------ALGEF----ERGMQIHCSAVKLGLEMNRFVG 153
Query: 149 AQ--RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
+ + C +V ++ ++ VK+GG + VSWT M++ LV
Sbjct: 154 TSLVEFYTKCGCCSVEAWKLL----SLVKDGGDV---------------VSWTTMLSSLV 194
Query: 207 ENGLYEEAWELFGRMPQK---------------------------------------NVV 227
ENG + EA+E++ +M + N+V
Sbjct: 195 ENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLV 254
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
TA++ + K ++ +A + D+ W +I+G+ QN + EA+++F M +G
Sbjct: 255 LKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSG 314
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
+ P++ + SL A +S+ LD G Q ++ VI G + DL + NALV MY KC I +
Sbjct: 315 LLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNA 374
Query: 348 L-AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
+ F + + P+++ W ++IA FA+ L + F +M A GVRP+ T ++L C +
Sbjct: 375 VKVFREITSPNVMCWTSLIAGFAEKRL-EDSFQLFAEMQAAGVRPNSFTMSAILGACSKT 433
Query: 407 GKIDESMNLFNLMVHDYGIPPRSE----HYACLVDVMSRAGQLQRACEII 452
+ +M M+H + I + + LVD + G + A +I
Sbjct: 434 RSLVPTM-----MLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVI 478
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
Q ++ + +++ + K V A LF ++ RD+ SW +++ + + +AL LF
Sbjct: 46 QHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDM 105
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG- 341
M+ +G P++ S +C +L ++G Q + +K G + + V +LV Y+KCG
Sbjct: 106 MIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGC 165
Query: 342 -SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
S+ +L D+VSW T++++ ++ + +A + +MI GV P+ TF+ LL
Sbjct: 166 CSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLL 225
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%)
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
L +G ++ +IK G DL + N L+++Y+K + + F + D+VSW TI+++
Sbjct: 30 LKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSS 89
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
+ + A FD MI G P+ T S L C G+ + M +
Sbjct: 90 HTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQI 137
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 198/356 (55%), Gaps = 15/356 (4%)
Query: 110 VQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYT 165
+++ L A F + +R ++YN MI G++K G++ ++ LF ++ P+ +++
Sbjct: 83 IKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTFS 142
Query: 166 VMIDGYV-KVKEG-----GGIARARAL-FDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
+++ +V G G + A+ L FD +++V T +I+ V+NG +F
Sbjct: 143 MILKASTNRVSNGMVGDLGRMVHAQILKFDV--EKDDVLCTALIDSYVKNGRVGYGRTVF 200
Query: 219 GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQ-NGRGEEAL 277
M +KNV++ST++I+G+ +G D+A +F++ +D+ +N MI GY++ + +L
Sbjct: 201 DVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRSL 260
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
++ M R +P+ F S+ AC+ LA + G Q A ++K F + + + +AL+ MY
Sbjct: 261 EVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQLMKTPFFAVIKLGSALIDMY 320
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM-IAVGVRPDGITF 396
SKCG ++D++ F + ++ SW ++I + ++ +A F +M I + P+ +TF
Sbjct: 321 SKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNGFPDEALELFKKMQIEYSITPNFVTF 380
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
LS L+ C AG ++ +F M +Y + PR EHYAC+VD++ RAG L +A E +
Sbjct: 381 LSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACMVDLLGRAGWLNQAWEFV 436
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 122/291 (41%), Gaps = 64/291 (21%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
KD V +++ +Y +G + R +FD M KNV+S ++++G + D+A F
Sbjct: 175 KDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKT 234
Query: 126 PERNAASYNAMISGFIKFGRLC--------DAQRL-FKEMPCPNVVSY------------ 164
+++ +NAMI G+ K D QRL F+ PN+ ++
Sbjct: 235 LDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFR----PNLSTFASIIGACSVLAA 290
Query: 165 -----------------------TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
+ +ID Y K G + A+ +FD M +N SWT M
Sbjct: 291 FEIGEQVQAQLMKTPFFAVIKLGSALIDMYSKC---GRVIDAQRVFDHMLEKNVFSWTSM 347
Query: 202 INGLVENGLYEEAWELFGRMP-----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR- 255
I+G +NG +EA ELF +M N V + +T G V+ W +FQ +
Sbjct: 348 IDGYGKNGFPDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEY 407
Query: 256 ----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ + M+ + G +A ++M +P+ ++++L ++C
Sbjct: 408 KLKPRMEHYACMVDLLGRAGWLNQAWEFVTRMPE---RPNSDVWLALLSSC 455
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 42/223 (18%)
Query: 219 GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
G +P N+ S ++ + K + A +F + R ++++N MI GY +NG+ +E+L+
Sbjct: 67 GFVPNTNI--SIKLLILYIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYLKNGQVDESLD 124
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLA----LLDQGRQTYALVIKHGFDSDLSVNNALV 334
LF Q+ +G +PD F + A + + D GR +A ++K + D + AL+
Sbjct: 125 LFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVGDLGRMVHAQILKFDVEKDDVLCTALI 184
Query: 335 TMYSKCGSI-------------------------------VDSELAFGQTSQPDIVSWNT 363
Y K G + D+E F +T D+V +N
Sbjct: 185 DSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNA 244
Query: 364 IIAAFAQHVLYYKARS---YFDQMIAVGVRPDGITFLSLLSVC 403
+I +++ V Y RS Y D M + RP+ TF S++ C
Sbjct: 245 MIEGYSK-VSEYAMRSLEVYID-MQRLNFRPNLSTFASIIGAC 285
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 53/262 (20%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
I ++ + G + R VFD M K+V++ S+++ Y + GF + +F K+VV +N
Sbjct: 184 IDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFN 243
Query: 104 AMVAGC------------VQNDMLDEAF----NYFAA------------MPERNAASY-- 133
AM+ G V DM F + FA+ + E+ A
Sbjct: 244 AMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQLMK 303
Query: 134 ----------NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
+A+I + K GR+ DAQR+F M NV S+T MIDGY K G A
Sbjct: 304 TPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGK---NGFPDEA 360
Query: 184 RALFDAMPRR-----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS-----TAMI 233
LF M N V++ + GL E WE+F M + + M+
Sbjct: 361 LELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACMV 420
Query: 234 TGFCKQGKVDEAWTLFQQIRCR 255
+ G +++AW ++ R
Sbjct: 421 DLLGRAGWLNQAWEFVTRMPER 442
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 86/203 (42%), Gaps = 18/203 (8%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-----N 98
I +S+ G + A++VFD M K+V +W SM+ Y +GFP + LF M ++ N
Sbjct: 317 IDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGKNGFPDEALELFKKMQIEYSITPN 376
Query: 99 VVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQRLF 153
V++ + + C +++ + F +M Y M+ + G L A
Sbjct: 377 FVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACMVDLLGRAGWLNQAWEFV 436
Query: 154 KEMPC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV----SWTVMINGLVEN 208
MP PN + ++ + G I A+ + + + N ++ + N L +
Sbjct: 437 TRMPERPNSDVWLALLSS---CRIHGNIEMAKLAANELFKLNAYGRPGAYVALSNTLADA 493
Query: 209 GLYEEAWELFGRMPQKNVVASTA 231
G ++ EL M +K + TA
Sbjct: 494 GKWDNVSELREVMKEKGISKDTA 516
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 186/402 (46%), Gaps = 57/402 (14%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQ 111
N+T AR VFD++ + + V WN+M+ AY +S P+ + L+ M + + + NA
Sbjct: 60 NLTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQM-LHHSIPHNAYTF---- 114
Query: 112 NDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGY 171
L +A + +A+ E + + GF E+ N + I G
Sbjct: 115 -PFLLKACSALSALAETHQIHVQIIKRGF------------GSEVYATNSLLRVYAISGS 161
Query: 172 VKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTA 231
+K A LFD +P R ++V+
Sbjct: 162 IK--------SAHVLFDLLPSR-------------------------------DIVSWNT 182
Query: 232 MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
MI G+ K G V+ A+ +FQ + +++ SW MI G+ + G +EAL L QM+ G++PD
Sbjct: 183 MIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPD 242
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
+ +ACA L L+QG+ + + K+ D + AL+ MY KCG + + L F
Sbjct: 243 KITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFS 302
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ + + +W II FA H +A +F QM G++P TF ++L+ C G ++E
Sbjct: 303 KLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEE 362
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+LF M Y + P EHY C+VD++ RAG L+ A E +
Sbjct: 363 GKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVE 404
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 142/304 (46%), Gaps = 27/304 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+VY N + ++ +G+I +A +FD +P++D+V+WN+M+ Y G + + +F AMP
Sbjct: 145 EVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMP 204
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAM------PERNAASYNAMISGFIKFGRLCDA 149
KNV+SW +M+ G V+ M EA M P++ S + +S G L
Sbjct: 205 EKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCS--LSACAGLGALEQG 262
Query: 150 QRLFKEMPCPNV----VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
+ + + + V +ID YVK G + +A +F + ++ +WT +I G
Sbjct: 263 KWIHTYIGKNKIKIDPVLGCALIDMYVKC---GEMKKALLVFSKLEKKCVYTWTAIIGGF 319
Query: 206 VENGLYEEAWELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTLFQQIRC-----RD 256
+G EA + F +M + + + TA++T G V+E +LF+ +
Sbjct: 320 AVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPV 379
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ + M+ + G +EA M ++P+ I+ SL AC L+ G++
Sbjct: 380 MEHYGCMVDLLGRAGFLKEAKEFVESM---PIKPNAAIWGSLLNACHLHKHLELGKEIGK 436
Query: 317 LVIK 320
+I+
Sbjct: 437 FLIE 440
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 225/458 (49%), Gaps = 21/458 (4%)
Query: 6 IVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT 65
++S KP A+ H L++ + V A +N+ +++ G + + F +M
Sbjct: 343 VLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNM--YAKIGGVGLSELAFSEMKN 400
Query: 66 -KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLD-----EAF 119
KD W SML+++ + + LF M ++ V + G + + M +
Sbjct: 401 MKDPGIWASMLSSFAQNRNSGRALELFTVM-LREGVKPDEYCIGSLLSIMSSLSLGSQVH 459
Query: 120 NY-FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG 178
+Y A NA ++ + + K G L ++ +F++ + VS+ MI G+V E G
Sbjct: 460 SYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNVSWASMISGFV---EHG 516
Query: 179 GIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVAST 230
+A LF M + + ++ ++ + L E+ G + N V
Sbjct: 517 YPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGREIHGSTFRLGLGTNTVVGG 576
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
A++ + K G + A +F + +D + + +++GYAQNG EE+ LF M+R
Sbjct: 577 ALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESFLLFHDMLRNDETV 636
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
D S+ A + L D G Q +A + K G +D+SV ++L+TMYSKCGSI D AF
Sbjct: 637 DAFTITSILGAASLLCQSDIGTQLHAYIEKLGLQADVSVGSSLLTMYSKCGSIEDCRKAF 696
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
+PD++ W ++I ++AQH A + ++ M + GV PD +TF+ +LS C +G ++
Sbjct: 697 DDVEKPDLIGWTSLILSYAQHGKGADALAAYELMKSEGVEPDAVTFVGILSACSHSGLVE 756
Query: 411 ESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
E+ N M+ DY I P HYAC+VD++ R+G+L+ A
Sbjct: 757 EAFFYLNSMIEDYKITPSHRHYACIVDILGRSGRLREA 794
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 186/399 (46%), Gaps = 21/399 (5%)
Query: 12 KPTPSSTARHTHFLL--VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVV 69
K +P AR+T L + H+ ++ + I + ++ ++ A ++FD + +V
Sbjct: 43 KFSPQHNARNTKILHAHLLKTHYLQSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIV 102
Query: 70 TWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
+WN M++ Y + S +F M + + S+ ++++ CV F+ +
Sbjct: 103 SWNVMISGYVRNSMFLKSLEMFCRMHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLV 162
Query: 126 PERNAAS----YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
+ S M+ F K +A R F + C NV S+ +I VK E
Sbjct: 163 VKNGFLSSGYVQTQMVDMFCKNCNFSEALRFFNDASCDNVASWNAIISLAVKNGEN---Q 219
Query: 182 RARALFDAMPRR----NEVSWTVMING---LVENGLYEEAWELFGRMPQKNVVASTAMIT 234
A LF M R N ++ ++ L E + + L + +V TA++
Sbjct: 220 VALNLFSEMCRASLMPNSYTFPSILTACCALKEMQIGKGVHGLAIKCGATDVFVETAIVD 279
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
+ K G + EA+ F Q++ +++ SW +I+G+ Q AL LF M + G + +
Sbjct: 280 LYAKFGCMSEAYRQFSQMQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYT 339
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ-T 353
S+ +ACA L+++ +Q ++LV+K G ++ V ALV MY+K G + SELAF +
Sbjct: 340 VTSVLSACAKPELIEEAKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMK 399
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
+ D W +++++FAQ+ +A F M+ GV+PD
Sbjct: 400 NMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVKPD 438
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 94/182 (51%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
Q + ++I +CK + A LF I I SWN+MI+GY +N ++L +F +
Sbjct: 67 QSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVRNSMFLKSLEMFCR 126
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M G +PD+ + S+ +AC +L G Q ++LV+K+GF S V +V M+ K +
Sbjct: 127 MHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCN 186
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
++ F S ++ SWN II+ ++ A + F +M + P+ TF S+L+
Sbjct: 187 FSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMPNSYTFPSILTA 246
Query: 403 CC 404
CC
Sbjct: 247 CC 248
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 210/429 (48%), Gaps = 17/429 (3%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + N ++ +++ ++ A++ +FD+M K VV+WN+M+ Y +G + F M
Sbjct: 191 DSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEML 250
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRLCDAQRLF 153
+ + + V + E + + +A+ +++ + K G A++L+
Sbjct: 251 KEGFHPSSVTIMNLVSANAFPENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLY 310
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF------DAMPRRNEVSWTVMINGLVE 207
K P ++++ T +I Y E G I A F D P + V+ +++G+
Sbjct: 311 KYYPTKDLITLTAIISSY---SEKGDIESAVECFIQTIQLDIKP--DAVALIGVLHGITN 365
Query: 208 NGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
+ G + + + + +I+ + + +++ A +LF +R + + +WN M
Sbjct: 366 PSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSM 425
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I+G Q G+ +A+ LFS+M G +PD + SL + C L L G ++ ++++
Sbjct: 426 ISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNV 485
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
+ + AL+ MYSKCG + +E F P + +WN II+ ++ + L + A + +
Sbjct: 486 RVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSK 545
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
+ G++PD ITFL +L+ C G + + FN+M +YG+ P +HYAC+V ++ + G
Sbjct: 546 LQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEG 605
Query: 444 QLQRACEII 452
+ A E I
Sbjct: 606 LFKEAIEFI 614
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 101/172 (58%)
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
T++I + K G A +F Q+ RD+ SWN++I GY+QNG A+ LF M+R +
Sbjct: 95 TSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFK 154
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
P+ VSL +C L+ QGR + IK GF D +NNAL++MY+KC + S+L
Sbjct: 155 PNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLL 214
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
F + + +VSWNT+I + Q+ L+ KA YF +M+ G P +T ++L+S
Sbjct: 215 FDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVS 266
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 192/423 (45%), Gaps = 30/423 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
I + + G + AR +FD+M +DVV+WN ++ Y +G+ H+ LF M +N
Sbjct: 98 IDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQ 157
Query: 104 AMV------AGCVQNDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQRLFKE 155
+ GC + + + F S+ NA++S + K L +Q LF E
Sbjct: 158 TTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDE 217
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
M +VVS+ MI Y + G +A F M + +V I LV + E
Sbjct: 218 MDEKSVVSWNTMIGVY---GQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFPENV 274
Query: 216 ELF----GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
+ G +VV T+++ + KQG + A L++ +D+ + +I+ Y++ G
Sbjct: 275 HCYVVKCGFTNDASVV--TSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKG 332
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN 331
E A+ F Q ++ ++PD + + + + + G + +K G +D V N
Sbjct: 333 DIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVAN 392
Query: 332 ALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRP 391
L+++YS+ I + F + +++WN++I+ Q A F +M G +P
Sbjct: 393 GLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKP 452
Query: 392 DGITFLSLLSVCCRAG--KIDESMNLF----NLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
D IT SLLS CC+ G +I E+++ + N+ V D+ L+D+ S+ G+L
Sbjct: 453 DAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDF-------IGTALIDMYSKCGRL 505
Query: 446 QRA 448
A
Sbjct: 506 DYA 508
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 132/301 (43%), Gaps = 53/301 (17%)
Query: 164 YTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM-- 221
+T +ID Y+K+ G + AR +FD M R+ VSW V+I G +NG A +LF M
Sbjct: 94 HTSLIDLYMKL---GFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLR 150
Query: 222 ----PQKNVVAS---------------------------------TAMITGFCKQGKVDE 244
P + + S A+++ + K ++
Sbjct: 151 ENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEA 210
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
+ LF ++ + + SWN MI Y QNG ++A+ F +M++ G P + ++L +A A
Sbjct: 211 SQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAF 270
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
+ V+K GF +D SV +LV +Y+K G ++ + D+++ I
Sbjct: 271 ------PENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAI 324
Query: 365 IAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
I+++++ A F Q I + ++PD + + +L G + S H YG
Sbjct: 325 ISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLH-----GITNPSHFAIGCTFHGYG 379
Query: 425 I 425
+
Sbjct: 380 V 380
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 276 ALNLFSQMVRTGMQPDDLIFVSL---------FTACASLALLDQGRQTYALVIKHGFDSD 326
AL +F Q+++ + P++ F L FT C S A L Q RQ +K G +
Sbjct: 32 ALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAAL-QARQIQTQCLKRGVNQF 90
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ V+ +L+ +Y K G + F Q S D+VSWN +I ++Q+ Y A F M+
Sbjct: 91 IHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLR 150
Query: 387 VGVRPDGITFLSLLSVC 403
+P+ T +SLL C
Sbjct: 151 ENFKPNQTTIVSLLPSC 167
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 105/248 (42%), Gaps = 19/248 (7%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S D AN I+ +SR I AA +F M K ++TWNSM++ +G + LF
Sbjct: 385 SNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSE 444
Query: 94 MPM----KNVVSWNAMVAGCVQ--NDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGR 145
M M + ++ ++++GC Q N + E + + + A+I + K GR
Sbjct: 445 MSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGR 504
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGY-VKVKEGGGIARARALFDAMPRRNEVSWTVMING 204
L A+++F + P + ++ +I GY + E L + + +++++ ++
Sbjct: 505 LDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAA 564
Query: 205 LVENGLYEEAWELF-------GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-D 256
GL E F G MP A + G K+G EA ++ + D
Sbjct: 565 CTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLG--KEGLFKEAIEFINKMEIQPD 622
Query: 257 IASWNIMI 264
A W ++
Sbjct: 623 SAVWGALL 630
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 196/425 (46%), Gaps = 66/425 (15%)
Query: 85 QHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM-------PERNAASYNAMI 137
+ +R +FD M KNVV+W M+ Q DEA + F M P+R +
Sbjct: 212 ESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDR------FTL 265
Query: 138 SGFIKFGRLCDAQRLFKEMPCPNVVSYTVM--------IDGYVKVKEGGGIARARALFDA 189
+G I L KE+ + S V+ +D Y K G + AR +FD
Sbjct: 266 TGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKC---GLVQEARKVFDG 322
Query: 190 MPRRNEVSWTVMINGLVENGL-YE-EAWELFGRMP-QKNVVASTAMITGFCKQGKVDEAW 246
M N +SWT ++NG V G YE EA +F M Q V + +G K +
Sbjct: 323 MREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDF 382
Query: 247 TLFQQIRCRDI--------ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI---- 294
+Q+ + I N +++ YA++GR E A F + + + ++
Sbjct: 383 DFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTN 442
Query: 295 ---------------------------FVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+ SL + A + + +G Q +A+V+K GF +DL
Sbjct: 443 VKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDL 502
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
SVNNAL++MYSKCG+ + F ++++W +II FA+H KA F M+
Sbjct: 503 SVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLET 562
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
GV+P+ +T++++LS C G IDE+ F M ++GI PR EHYAC+VD++ R+G L
Sbjct: 563 GVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSE 622
Query: 448 ACEII 452
A E I
Sbjct: 623 AIEFI 627
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 179/406 (44%), Gaps = 53/406 (13%)
Query: 61 DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFN 120
+K+ T ++ + T H G H + +P+ ++ + + ND + AF+
Sbjct: 50 NKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPI-TAFS 108
Query: 121 YFAAMP--ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG 178
F +M +R+ SY+++IS F A +F ++ ++ DG
Sbjct: 109 IFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQL---------LLQDG-------- 151
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ-----KNVVASTAMI 233
P NE +T +I ++ G ++ LFG + + +V +I
Sbjct: 152 ----------VYP--NEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELI 199
Query: 234 TGF---CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM-VRTGMQ 289
F C ++ A +F ++R +++ +W +MIT AQ G +EA++LF +M V +G
Sbjct: 200 DMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYV 259
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
PD L + CA + L G++ ++ VI+ G DL V +LV MY+KCG + ++
Sbjct: 260 PDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKV 319
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYK---ARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F + +++SW ++ + + Y+ R + + ++ GV P+ TF +L C
Sbjct: 320 FDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASL 379
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYAC----LVDVMSRAGQLQRA 448
D F VH I C LV V +++G+++ A
Sbjct: 380 PDFD-----FGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESA 420
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 188/464 (40%), Gaps = 64/464 (13%)
Query: 49 RAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMP--MKNVVSW 102
R N + + K+ T D + NS++T Y S P + ++F +M ++VVS+
Sbjct: 64 RTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSY 123
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC---- 158
+++++ N +A F + ++ N F R C FK C
Sbjct: 124 SSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYC--FTAVIRACLKGGFFKTGLCLFGF 181
Query: 159 --------PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
+V +ID +VK + AR +FD M +N V+WT+MI L + G
Sbjct: 182 VLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGY 241
Query: 211 YEEAWELF-------GRMPQK---------------------------------NVVAST 230
+EA +LF G +P + ++
Sbjct: 242 NDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGC 301
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG--EEALNLFSQM-VRTG 287
+++ + K G V EA +F +R ++ SW ++ GY + G G EA+ +FS M ++ G
Sbjct: 302 SLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGG 361
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
+ P+ F + ACASL D G Q + IK G + V N LV++Y+K G + +
Sbjct: 362 VAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESAR 421
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
F + ++VS + + + ++ VG T+ SLLS G
Sbjct: 422 KCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIG 481
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
I + + + MV G L+ + S+ G + A ++
Sbjct: 482 TIGKGEQI-HAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQV 524
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+ N I+ +S+ GN AA QVF+ M +V+TW S++ + GF + LF M
Sbjct: 501 DLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNML 560
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNA-----ASYNAMISGFIKFGRL 146
V V++ A+++ C ++DEA+ +F +M + + Y M+ + G L
Sbjct: 561 ETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLL 620
Query: 147 CDAQRLFKEMP--CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMING 204
+A MP +V T + V G A+ + + P + ++ ++ N
Sbjct: 621 SEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREP-HDPATYILLSNL 679
Query: 205 LVENGLYEEAWELFGRMPQKNV 226
G +E+ + M QK +
Sbjct: 680 YATEGRWEDVAAIRKNMKQKQI 701
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 106/250 (42%), Gaps = 27/250 (10%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQN------DMLDEAFNYFAAM 125
N +++ Y SG + +R FD + KN+VS + V++ LD Y +
Sbjct: 405 NGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGSG 464
Query: 126 PERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIA 181
++ +Y +++SG G + +++ + ++ +I Y K G
Sbjct: 465 V--SSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKC---GNKE 519
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFC 237
A +F+ M N ++WT +ING ++G +A ELF M + V V A+++
Sbjct: 520 AALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACS 579
Query: 238 KQGKVDEAWTLFQQIRCRD-----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
G +DEAW F +R + + M+ ++G EA+ + M D
Sbjct: 580 HVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSM---PFDADA 636
Query: 293 LIFVSLFTAC 302
L++ + +C
Sbjct: 637 LVWRTFLGSC 646
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 184/334 (55%), Gaps = 7/334 (2%)
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG-GGIARARA 185
E N +A++ + K + DA ++F+ M + VS+T +I G+ K+G + +
Sbjct: 78 EDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKE 137
Query: 186 LFDAMPRRNEVSWTVMINGLV-ENGLYEEAWELFGRMPQKNVVASTAMITG----FCKQG 240
+ R N + T +IN V +NG+ E L + ++ S+ +I+ + G
Sbjct: 138 MLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWG 197
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
++D+A LF + +D +N MI+GY QN E+AL LF +M M P D S+ +
Sbjct: 198 QIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILS 257
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
AC+SLA+L QGRQ ++LVIK G + ++ V + L+ MYSK G I +++ QTS+ + V
Sbjct: 258 ACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVL 317
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
W ++I +AQ +A FD ++ + PD + F ++L+ C AG ID+ FN M
Sbjct: 318 WTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKM 377
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ +YG+ P + YACL+D+ +R G L++A +++
Sbjct: 378 ITNYGLSPDIDIYACLIDLYARNGNLRKARDLME 411
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 175/418 (41%), Gaps = 95/418 (22%)
Query: 41 NLNIAAFSRAGNITAARQVFDKM------PTKDVVTWNSM----LTAYWHSGFPQHSRAL 90
N+ I S++ + A + +M PTK V+ N++ T WH G H+ +
Sbjct: 15 NVYIRKHSKSASTCQALESLSRMNGLIEKPTKYVLC-NALSSCAKTLNWHLGIQIHAYMI 73
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFI--KFGRLCD 148
N+ +A+V + + +A F AM + + S+ ++I+GF K GR D
Sbjct: 74 RSGYE-DNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGR--D 130
Query: 149 AQRLFKEMPC----PNVVSYTVMIDGYVK---------------VKEG------------ 177
A LFKEM PN + T +I+ V +K+G
Sbjct: 131 ALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLV 190
Query: 178 ------GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------- 224
G I A LF+ ++ V + MI+G +N E+A +LF M +K
Sbjct: 191 DCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDH 250
Query: 225 --------------------------------NVVASTAMITGFCKQGKVDEAWTLFQQI 252
NV ++ +I + K G +DEA + Q
Sbjct: 251 TLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQT 310
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMV-RTGMQPDDLIFVSLFTACASLALLDQG 311
++ W MI GYAQ GRG EAL LF ++ + + PD + F ++ TAC +D+G
Sbjct: 311 SKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKG 370
Query: 312 RQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAA 367
+ + ++ +G D+ + L+ +Y++ G++ + +L P+ + W++ ++A
Sbjct: 371 EEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSA 428
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
AW F + A N+ I ++++ +AL S+M +P + + ++CA
Sbjct: 5 AWKFFGK------ACKNVYIRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAK 58
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
G Q +A +I+ G++ +L + +ALV Y+KC +IVD+ F Q D VSW ++
Sbjct: 59 TLNWHLGIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSL 118
Query: 365 IAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
IA F+ + A F +M+ +RP+ T S+++ C + E ++ V G
Sbjct: 119 IAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQG 178
Query: 425 IPPRSEHYACLVDVMSRAGQLQRA 448
S + LVD + GQ+ A
Sbjct: 179 FDTSSFVISSLVDCYANWGQIDDA 202
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 24/267 (8%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
+S++ Y + G + LF+ K+ V +N M++G QN ++A F M E+N +
Sbjct: 187 SSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMS 246
Query: 132 ----SYNAMISGFIKFGRLCDAQR----LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
+ ++++S L ++ + K NV + +ID Y K GG I A
Sbjct: 247 PTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSK---GGDIDEA 303
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK-----NVVASTAMITGFCK 238
+ + D ++N V WT MI G + G EA ELF + K + V TA++T
Sbjct: 304 QCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNH 363
Query: 239 QGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
G +D+ F ++ DI + +I YA+NG +A +L +M P+ +
Sbjct: 364 AGFIDKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEM---PYDPNCI 420
Query: 294 IFVSLFTACASLALLDQGRQTYALVIK 320
I+ S +AC ++ GR+ +IK
Sbjct: 421 IWSSFLSACKIYGDVELGREAAIQLIK 447
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 15/218 (6%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
R H L++ K S +VY A+ I +S+ G+I A+ V D+ K+ V W SM+ Y
Sbjct: 268 GRQVHSLVI--KMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGY 325
Query: 79 WHSGFPQHSRALFDAMPMK-----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS- 132
G + LFD + K + V + A++ C +D+ YF M S
Sbjct: 326 AQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSP 385
Query: 133 ----YNAMISGFIKFGRLCDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARAL- 186
Y +I + + G L A+ L +EMP PN + ++ + K+ + R A+
Sbjct: 386 DIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSA-CKIYGDVELGREAAIQ 444
Query: 187 FDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK 224
M N + + + GL+ EA E+ M Q+
Sbjct: 445 LIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQR 482
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 184/334 (55%), Gaps = 7/334 (2%)
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG-GGIARARA 185
E N +A++ + K + DA ++F+ M + VS+T +I G+ K+G + +
Sbjct: 78 EDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKE 137
Query: 186 LFDAMPRRNEVSWTVMINGLV-ENGLYEEAWELFGRMPQKNVVASTAMITG----FCKQG 240
+ R N + T +IN V +NG+ E L + ++ S+ +I+ + G
Sbjct: 138 MLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWG 197
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
++D+A LF + +D +N MI+GY QN E+AL LF +M M P D S+ +
Sbjct: 198 QIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDHTLSSILS 257
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
AC+SLA+L QGRQ ++LVIK G + ++ V + L+ MYSK G I +++ QTS+ + V
Sbjct: 258 ACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVL 317
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
W ++I +AQ +A FD ++ + PD + F ++L+ C AG ID+ FN M
Sbjct: 318 WTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKM 377
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ +YG+ P + YACL+D+ +R G L++A +++
Sbjct: 378 ITNYGLSPDIDIYACLIDLYARNGNLRKARDLME 411
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/418 (23%), Positives = 175/418 (41%), Gaps = 95/418 (22%)
Query: 41 NLNIAAFSRAGNITAARQVFDKM------PTKDVVTWNSM----LTAYWHSGFPQHSRAL 90
N+ I S++ + A + +M PTK V+ N++ T WH G H+ +
Sbjct: 15 NVYIRKHSKSASTCQALESLSRMNGLIEKPTKYVLC-NALSSCAKTLNWHLGIQIHAYMI 73
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFI--KFGRLCD 148
N+ +A+V + + +A F AM + + S+ ++I+GF K GR D
Sbjct: 74 RSGYE-DNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSANKQGR--D 130
Query: 149 AQRLFKEMPC----PNVVSYTVMIDGYVK---------------VKEG------------ 177
A LFKEM PN + T +I+ V +K+G
Sbjct: 131 ALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVISSLV 190
Query: 178 ------GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------- 224
G I A LF+ ++ V + MI+G +N E+A +LF M +K
Sbjct: 191 DCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMSPTDH 250
Query: 225 --------------------------------NVVASTAMITGFCKQGKVDEAWTLFQQI 252
NV ++ +I + K G +DEA + Q
Sbjct: 251 TLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQT 310
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMV-RTGMQPDDLIFVSLFTACASLALLDQG 311
++ W MI GYAQ GRG EAL LF ++ + + PD + F ++ TAC +D+G
Sbjct: 311 SKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKG 370
Query: 312 RQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAA 367
+ + ++ +G D+ + L+ +Y++ G++ + +L P+ + W++ ++A
Sbjct: 371 EEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSA 428
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
AW F + A N+ I ++++ +AL S+M +P + + ++CA
Sbjct: 5 AWKFFGK------ACKNVYIRKHSKSASTCQALESLSRMNGLIEKPTKYVLCNALSSCAK 58
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
G Q +A +I+ G++ +L + +ALV Y+KC +IVD+ F Q D VSW ++
Sbjct: 59 TLNWHLGIQIHAYMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSL 118
Query: 365 IAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
IA F+ + A F +M+ +RP+ T S+++ C + E ++ V G
Sbjct: 119 IAGFSANKQGRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQG 178
Query: 425 IPPRSEHYACLVDVMSRAGQLQRA 448
S + LVD + GQ+ A
Sbjct: 179 FDTSSFVISSLVDCYANWGQIDDA 202
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 24/267 (8%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
+S++ Y + G + LF+ K+ V +N M++G QN ++A F M E+N +
Sbjct: 187 SSLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMREKNMS 246
Query: 132 ----SYNAMISGFIKFGRLCDAQR----LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
+ ++++S L ++ + K NV + +ID Y K GG I A
Sbjct: 247 PTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSK---GGDIDEA 303
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK-----NVVASTAMITGFCK 238
+ + D ++N V WT MI G + G EA ELF + K + V TA++T
Sbjct: 304 QCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNH 363
Query: 239 QGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
G +D+ F ++ DI + +I YA+NG +A +L +M P+ +
Sbjct: 364 AGFIDKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEM---PYDPNCI 420
Query: 294 IFVSLFTACASLALLDQGRQTYALVIK 320
I+ S +AC ++ GR+ +IK
Sbjct: 421 IWSSFLSACKIYGDVELGREAAIQLIK 447
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 15/218 (6%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
R H L++ K S +VY A+ I +S+ G+I A+ V D+ K+ V W SM+ Y
Sbjct: 268 GRQVHSLVI--KMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGY 325
Query: 79 WHSGFPQHSRALFDAMPMK-----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS- 132
G + LFD + K + V + A++ C +D+ YF M S
Sbjct: 326 AQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSP 385
Query: 133 ----YNAMISGFIKFGRLCDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARAL- 186
Y +I + + G L A+ L +EMP PN + ++ + K+ + R A+
Sbjct: 386 DIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFLSA-CKIYGDVELGREAAIQ 444
Query: 187 FDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK 224
M N + + + GL+ EA E+ M Q+
Sbjct: 445 LIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQR 482
>Medtr3g088825.1 | PPR containing plant-like protein | HC |
chr3:40650693-40652499 | 20130731
Length = 555
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 218/499 (43%), Gaps = 97/499 (19%)
Query: 38 YRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM--- 94
Y N ++ FS++G++ A +F+ MP K+ + WNSM+ Y G+P+ + LF M
Sbjct: 61 YSWNQLVSTFSKSGDLQQAHNLFNAMPMKNPLVWNSMIHGYSRHGYPRKAILLFKEMIFD 120
Query: 95 PM----KNVVSWNAMVAGCVQNDMLD-----------EAF-------------NYFAAMP 126
P+ ++ + + C +LD + F N +
Sbjct: 121 PLETMHRDAFVLSTVFGACADLFVLDCGKQVHARVFIDGFEFKHDKVLCSSIVNLYGKCG 180
Query: 127 ERNAA-------------SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK 173
+ + A S +A++SG+ GR+ DA+R+F P V + +I GYV
Sbjct: 181 DLDIAVWVVGFVMDVDDFSLSALVSGYANAGRMSDARRVFDNKVDPCSVLWNSIISGYVS 240
Query: 174 VKEGGGIARARALFDAMPR---RNE----------------------------------- 195
G A LF+ M R R E
Sbjct: 241 ---NGEEMEALDLFNQMRRSGVRGEFPAVANILSAASSLLNFELVKQMHDHAFKIGATHD 297
Query: 196 -VSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
V + +++ + EA ELF + + + MIT +C G++++A +FQ +
Sbjct: 298 IVVASTLLDAYSKCQHSHEACELFDELKVYDAILLNTMITVYCNCGRIEDAKGIFQTMPN 357
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
+ + SWN ++ AL+ FS+M ++ D F S+ +ACA + L+ G Q
Sbjct: 358 KTLISWNSIL-----------ALDTFSRMNMLDVKMDKFSFASVISACAIKSSLELGEQV 406
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ I G +SD + +LV Y KCG + F + D VSWNT++ +A +
Sbjct: 407 FGKAITLGLESDQIIYTSLVDFYCKCGIVEMGRKVFDGMIRTDEVSWNTMLMGYATNGYG 466
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
+A + F++M GVRP ITF +LS C G ++E NLF M H+Y I P EHY+C
Sbjct: 467 IEALTLFNEMEYSGVRPSAITFNGVLSACDHCGLVEEGRNLFRTMKHEYDINPGIEHYSC 526
Query: 435 LVDVMSRAGQLQRACEIIR 453
+VD+ +RAG A +I
Sbjct: 527 MVDLFARAGCFGEAMYVIE 545
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 192/430 (44%), Gaps = 53/430 (12%)
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDE 117
Q+FD+MP + +WN+++ A+ + + S LF AMP K+ SWN +V+ ++ L +
Sbjct: 19 QLFDEMPQPNPFSWNTLIEAHINLSHRKKSLELFHAMPHKSHYSWNQLVSTFSKSGDLQQ 78
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM---PCPN------VVSYTVMI 168
A N F AMP +N +N+MI G+ + G A LFKEM P V+S
Sbjct: 79 AHNLFNAMPMKNPLVWNSMIHGYSRHGYPRKAILLFKEMIFDPLETMHRDAFVLSTVFGA 138
Query: 169 DGYVKVKEGGGIARARALFDAMP-RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV 227
+ V + G AR D + ++V + ++N + G + A + G + +
Sbjct: 139 CADLFVLDCGKQVHARVFIDGFEFKHDKVLCSSIVNLYGKCGDLDIAVWVVGFVMDVDDF 198
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
+ +A+++G+ G++ +A +F WN +I+GY NG EAL+LF+QM R+G
Sbjct: 199 SLSALVSGYANAGRMSDARRVFDNKVDPCSVLWNSIISGYVSNGEEMEALDLFNQMRRSG 258
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN----------------- 330
++ + ++ +A +SL + +Q + K G D+ V
Sbjct: 259 VRGEFPAVANILSAASSLLNFELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHSHEAC 318
Query: 331 --------------NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
N ++T+Y CG I D++ F ++SWN+I+A
Sbjct: 319 ELFDELKVYDAILLNTMITVYCNCGRIEDAKGIFQTMPNKTLISWNSILAL--------- 369
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
F +M + V+ D +F S++S C ++ +F + G+ Y LV
Sbjct: 370 --DTFSRMNMLDVKMDKFSFASVISACAIKSSLELGEQVFGKAI-TLGLESDQIIYTSLV 426
Query: 437 DVMSRAGQLQ 446
D + G ++
Sbjct: 427 DFYCKCGIVE 436
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 123/244 (50%), Gaps = 9/244 (3%)
Query: 181 ARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQG 240
AR LFD MP+ N SW +I + +++ ELF MP K+ + +++ F K G
Sbjct: 15 ARQLQLFDEMPQPNPFSWNTLIEAHINLSHRKKSLELFHAMPHKSHYSWNQLVSTFSKSG 74
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV---RTGMQPDDLIFVS 297
+ +A LF + ++ WN MI GY+++G +A+ LF +M+ M D + +
Sbjct: 75 DLQQAHNLFNAMPMKNPLVWNSMIHGYSRHGYPRKAILLFKEMIFDPLETMHRDAFVLST 134
Query: 298 LFTACASLALLDQGRQTYALVIKHGFD--SDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
+F ACA L +LD G+Q +A V GF+ D + +++V +Y KCG + + G
Sbjct: 135 VFGACADLFVLDCGKQVHARVFIDGFEFKHDKVLCSSIVNLYGKCGDLDIAVWVVGFVMD 194
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
D S + +++ +A AR FD V P + + S++S G+ E+++L
Sbjct: 195 VDDFSLSALVSGYANAGRMSDARRVFDN----KVDPCSVLWNSIISGYVSNGEEMEALDL 250
Query: 416 FNLM 419
FN M
Sbjct: 251 FNQM 254
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 127/274 (46%), Gaps = 23/274 (8%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H + A H D+ A+ + A+S+ + A ++FD++ D + N+M+T Y +
Sbjct: 286 HDHAFKIGATH----DIVVASTLLDAYSKCQHSHEACELFDELKVYDAILLNTMITVYCN 341
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVA--GCVQNDMLDEAFNYFAAMPERNAASYNAMIS 138
G + ++ +F MP K ++SWN+++A + +MLD + F+ +A + I
Sbjct: 342 CGRIEDAKGIFQTMPNKTLISWNSILALDTFSRMNMLDVKMDKFSFASVISACA----IK 397
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSW 198
++ G + + + ++ YT ++D Y K G + R +FD M R +EVSW
Sbjct: 398 SSLELGEQVFGKAITLGLESDQII-YTSLVDFYCKC---GIVEMGRKVFDGMIRTDEVSW 453
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF---CKQ-GKVDEAWTLFQQIRC 254
M+ G NG EA LF M V S G C G V+E LF+ ++
Sbjct: 454 NTMLMGYATNGYGIEALTLFNEMEYSGVRPSAITFNGVLSACDHCGLVEEGRNLFRTMKH 513
Query: 255 R-----DIASWNIMITGYAQNGRGEEALNLFSQM 283
I ++ M+ +A+ G EA+ + +M
Sbjct: 514 EYDINPGIEHYSCMVDLFARAGCFGEAMYVIEEM 547
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 213/435 (48%), Gaps = 40/435 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM- 94
D+ A + +++ G + AR++F + +D+V W++ L+A +G+P+ ++F M
Sbjct: 333 DIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQ 392
Query: 95 -----PMKNVVSWNAMVAGC--VQNDMLDEAFNYFA--AMPERNAASYNAMISGFIKFGR 145
P K ++S +V+GC + N L + + +A A E + + ++S +I+F
Sbjct: 393 YEGLKPDKAILS--ILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFEL 450
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG------------GGI----ARARALFDA 189
A LF M ++V + +I+G+ K + GI LF A
Sbjct: 451 FTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSA 510
Query: 190 MPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLF 249
+++ ++G +E +E ++ A++ + K G + LF
Sbjct: 511 CAIMDDLDLGTCLHGGIEKSGFES-----------DIHVKVALMDMYAKCGSLCSVERLF 559
Query: 250 QQIR-CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
+ +D SWN+MI GY NG EA++ F +M ++P+ + FV++ A + L++L
Sbjct: 560 LLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSIL 619
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
+ + +I+ GF S + N+L+ MY+KCG + SE F + D +SWN +++A+
Sbjct: 620 REAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAY 679
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
A H A + F M VR D ++++S+LS C +G I E ++F M + + P
Sbjct: 680 AMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPS 739
Query: 429 SEHYACLVDVMSRAG 443
EHYAC+VD++ AG
Sbjct: 740 MEHYACMVDLLGCAG 754
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 202/447 (45%), Gaps = 67/447 (14%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N I + + G++ +A++VFD+M +D V+W +M+ Y +G F+ + +
Sbjct: 236 SNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNG------CYFEGLQL--- 286
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
+ M G V+ + + R+ + + ++ G + D
Sbjct: 287 --LHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSD----------- 333
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF- 218
+V T ++ Y K G + +AR LF ++ R+ V+W+ ++ LVE G E +F
Sbjct: 334 -IVVATPIVCMYAKC---GELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQ 389
Query: 219 -----GRMPQKNVVA---------------------------------STAMITGFCKQG 240
G P K +++ T +++ + +
Sbjct: 390 VMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFE 449
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
A TLF +++ +DI WN +I G+ + G AL +F+++ +G+ PD V LF+
Sbjct: 450 LFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFS 509
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ-PDIV 359
ACA + LD G + + K GF+SD+ V AL+ MY+KCGS+ E F T D V
Sbjct: 510 ACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEV 569
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
SWN +IA + + +A S F +M VRP+ +TF+++L + E+M F+
Sbjct: 570 SWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAM-AFHTC 628
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQ 446
+ G + L+D+ ++ GQL+
Sbjct: 629 IIRMGFLSCTLIGNSLIDMYAKCGQLR 655
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 186/443 (41%), Gaps = 72/443 (16%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
DV S++ + G ++R +FD MP+K+ V WNAM++G Q+ EA F M
Sbjct: 133 DVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQ 192
Query: 127 ERNAASYNAMISGF----IKFGRLCDA-QRLFKEMPCPNVVSYTV-----------MIDG 170
+ GF + L A RL C ++ Y V +ID
Sbjct: 193 ----------MEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGVVSNSLIDM 242
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV---- 226
Y K G + A+ +FD M R++VSW M+ G V+NG Y E +L +M + NV
Sbjct: 243 YCKC---GDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNK 299
Query: 227 -----------------------------------VASTAMITGFCKQGKVDEAWTLFQQ 251
V +T ++ + K G++ +A LF
Sbjct: 300 VAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLS 359
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+ RD+ +W+ ++ + G E L++F M G++PD I L + C ++ + G
Sbjct: 360 LEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLG 419
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
+ + IK +SD+S+ LV+MY + + F + DIV WNT+I F ++
Sbjct: 420 KIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKY 479
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
+ A F+++ G+ PD T + L S C +D L + G
Sbjct: 480 GDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHG-GIEKSGFESDIHV 538
Query: 432 YACLVDVMSRAGQLQRACEIIRL 454
L+D+ ++ G L C + RL
Sbjct: 539 KVALMDMYAKCGSL---CSVERL 558
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 79/163 (48%)
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
T F QI+ + +N I Y++ +A+NL+ +++ G++PD F + AC S
Sbjct: 54 THFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLKACTSAL 113
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
+G Y ++ +G + D+ + +L+ M+ K G + ++ F + D V WN +I+
Sbjct: 114 DFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMIS 173
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
+Q + +A F +M G D ++ L+L R G +
Sbjct: 174 GLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDV 216
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 222/459 (48%), Gaps = 75/459 (16%)
Query: 59 VFDKMPTKDVVTWNSMLTAY--WHSGFPQHSRALFDAMPMKNVV----SWNAMVAGCVQN 112
+F ++ D+ WN+++ AY HS PQH +LF M +V+ ++ ++ C
Sbjct: 71 LFTQITNPDIFLWNAIIKAYSQIHSP-PQHPFSLFKTMLNSSVLPDSFTFPFLLKACANV 129
Query: 113 DMLDEAFNY-FAAMPERNAASY-----NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
+ F + RN NA+++ + FG + +A ++F E + VS+
Sbjct: 130 LISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNT 189
Query: 167 MIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGL-----------VENGLY 211
MI+G+ + + G R +F M R +E ++ +++G V +Y
Sbjct: 190 MINGFARKGDVSGCFR---VFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVY 246
Query: 212 EE----------------AWELFGRM-----------PQKNVVAS-TAMITGFCKQGKVD 243
E + GR+ P K+VVA+ T++++ + +G+V
Sbjct: 247 RELGCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVK 306
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
A LF Q+ RD+ SW MI+GY+ G +EAL LF ++ GM+PD++ V+ +ACA
Sbjct: 307 VARRLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACA 366
Query: 304 SLALLDQGR--------QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
L L+ GR + + I GF S A+V MY+KCGSI + F +TS
Sbjct: 367 RLGALELGRRIHRQYAGENWTCSINRGFTS------AVVDMYAKCGSIDIALDVFRKTSD 420
Query: 356 PDIVS--WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
+ +N+II+ A H A++ F++M +G++PD ITF+++LS C G +D
Sbjct: 421 DKKTTFLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGK 480
Query: 414 NLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
LF M YG+ P EHY C+VD++ RAG L A +I
Sbjct: 481 KLFESMFTVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLI 519
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 175/397 (44%), Gaps = 68/397 (17%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ N + + G++ A +VFD+ +D V++N+M+ + G +F M
Sbjct: 152 DVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMR 211
Query: 96 ----MKNVVSWNAMVAGC-VQND---------MLDEAFNYFAAMPERNAASYNAMISGFI 141
+ ++ A+++GC V D ++ F N N ++ +
Sbjct: 212 GVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGG----NVLLVNKLVDMYA 267
Query: 142 KFGRLCDAQRLFKEM-PCPNVVS-YTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWT 199
K GRL A+ + + P +VV+ +T ++ Y E + AR LFD M R+ VSWT
Sbjct: 268 KCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGE---VKVARRLFDQMGERDVVSWT 324
Query: 200 VMINGLVENGLYEEAWELF------GRMPQKNVVA------------------------- 228
MI+G G ++EA ELF G P + V
Sbjct: 325 AMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQYAGE 384
Query: 229 ----------STAMITGFCKQGKVDEAWTLFQQIRCRDIAS--WNIMITGYAQNGRGEEA 276
++A++ + K G +D A +F++ + +N +I+G A +GRGE A
Sbjct: 385 NWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYA 444
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVT 335
NLF +M G++PD++ FV++ +AC L+D G++ + ++ +G ++ +V
Sbjct: 445 KNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGCMVD 504
Query: 336 MYSKCGSIVDSE-LAFGQTSQPDIVSWNTIIAAFAQH 371
+ + G + ++ L + + V W +++A H
Sbjct: 505 LLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVH 541
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 118/233 (50%), Gaps = 9/233 (3%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+V + A++ +C G V A+ +F + RD S+N MI G+A+ G +F +M
Sbjct: 152 DVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVSGCFRVFGEMR 211
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH--GFDSDLSVNNALVTMYSKCGS 342
++PD+ FV+L + C+ L GRQ + LV + F ++ + N LV MY+KCG
Sbjct: 212 GVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKCGR 271
Query: 343 IVDSE--LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
+V +E L+ + + + +W ++++A+A AR FDQM G R D +++ +++
Sbjct: 272 LVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQM---GER-DVVSWTAMI 327
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
S AG E++ LF + + G+ P + +R G L+ I R
Sbjct: 328 SGYSHAGCFQEALELF-VKLEGLGMKPDEVAVVAALSACARLGALELGRRIHR 379
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Query: 247 TLFQQIRCRDIASWNIMITGYAQ-NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
TLF QI DI WN +I Y+Q + + +LF M+ + + PD F L ACA++
Sbjct: 70 TLFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKACANV 129
Query: 306 ALLDQ--GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNT 363
+ G Q + V+++GF SD+ VNNAL+ Y G +V++ F ++ D VS+NT
Sbjct: 130 LISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNT 189
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
+I FA+ F +M V VRPD TF++LLS C
Sbjct: 190 MINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGC 229
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 297 SLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA---FGQT 353
SL ++C ++ Q Q YA +I G ++L ++ L T Y+ S + F Q
Sbjct: 19 SLLSSCKTM---QQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQI 75
Query: 354 SQPDIVSWNTIIAAFAQ-HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
+ PDI WN II A++Q H S F M+ V PD TF LL C
Sbjct: 76 TNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLPDSFTFPFLLKAC 126
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 146/257 (56%), Gaps = 12/257 (4%)
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
G +A ++F M ++N+V T +++G+ + G V++ +F ++ RD+ +WN +I+G
Sbjct: 150 GGLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCT 209
Query: 269 QNGRGEEALNLFSQMVRT----------GMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
QNG E + LF +MV G +P+ + V + +AC +L G+ + V
Sbjct: 210 QNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYV 269
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+HGF D V+NALV MY KCGS+ + F + + SWN++I +A H A
Sbjct: 270 YRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCEDAI 329
Query: 379 SYFDQMIAVG--VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
++F++M+ G VRPD +TF+ LL+ C G +++ F +M+ +YGI P+ HY CL+
Sbjct: 330 TFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLI 389
Query: 437 DVMSRAGQLQRACEIIR 453
D++ RAGQ A ++++
Sbjct: 390 DLLGRAGQFDEAMDVVK 406
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 203/465 (43%), Gaps = 88/465 (18%)
Query: 31 HFSSYDVYR-ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSR- 88
HF ++ + R +LN++ N+ A Q+F+ + + ++ + +++TA+ QH+
Sbjct: 38 HFYAFKLIRFCSLNLS------NLHYAHQIFNHIHSPNIYLFTAIITAF---SSQQHTTF 88
Query: 89 ALFDAMPMKNVVSWNAM------------VAGCVQNDMLDEAFNYFAAMPERNAASYNAM 136
LF M N+ N + + V ++ F + + SY+ +
Sbjct: 89 KLFKTMLNSNIRPNNFIYPHVLKSVKERFLVDLVHAQIVKCGFLNYPVVETSLVDSYSKV 148
Query: 137 ISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
+ G L DA ++F EM N+V +TV++ GY++V G + + +FD M R+
Sbjct: 149 LGG------LRDAHKVFDEMSERNIVVFTVLVSGYLRV---GDVEKGLMVFDEMVDRDVP 199
Query: 197 SWTVMINGLVENGLYEEAWELF----------------GRMPQKNVV------------- 227
+W +I+G +NG + E LF G P + V
Sbjct: 200 AWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGML 259
Query: 228 --------------------ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
S A++ + K G ++ A +F+ + + + SWN MI Y
Sbjct: 260 QLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCY 319
Query: 268 AQNGRGEEALNLFSQMVRT--GMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGFD 324
A +G+ E+A+ F +MV G++PD++ F+ L AC L++QG + ++IK +G +
Sbjct: 320 ALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIE 379
Query: 325 SDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
++ L+ + + G ++ ++ G + +PD V W +++ H A +
Sbjct: 380 PQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKK 439
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD--YGIP 426
++ + G + L ++ + GK DE N+++ + Y IP
Sbjct: 440 LVEIDPHNGGYGTM-LANIYGQLGKWDEMRNVWSKLKQQKSYKIP 483
>Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:874317-871628 | 20130731
Length = 505
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 194/383 (50%), Gaps = 32/383 (8%)
Query: 76 TAYWHSGFPQ-HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN 134
T HS Q H++ L ++ + NV+ ++ + ++ A F MP+RN S+N
Sbjct: 12 TCKTHSTVSQCHAQTLLQSL-LPNVILETDLLLAYTKLGLISHARKLFDKMPQRNMHSWN 70
Query: 135 AMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN 194
MI+ + DA +F+ V+ D Y LF R +
Sbjct: 71 IMIASYTHNSMYFDALTVFEAFK-----RCGVLPDCYT----------LPPLFKISIRID 115
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
E M +GLV YEE VV + +++ + K G + +A ++F
Sbjct: 116 ECCLGWMCHGLVVKLGYEEI-----------VVVNNSVLEFYVKCGTMSQALSVFSNHNA 164
Query: 255 -RDIASWNIMITGYAQNGRGEEALNLFSQMV--RTGMQPDDLIFVSLFTACASLALLDQG 311
RD A+WN+MI+G+ + G EA++ F +M+ R G++ D + S+ +AC L +
Sbjct: 165 PRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDHMTLPSILSACGKEGDLLKV 224
Query: 312 RQTYALVIKH-GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
++ + ++++ GFD+D + NAL+ Y KCGS+ DSE F ++V+W T+I+ +
Sbjct: 225 KEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMISCYGM 284
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSE 430
H ++ F++M+ G RP+ +T ++L+ C G +D+ +F M+ DYG+ P +E
Sbjct: 285 HGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQGKKIFGSMISDYGLEPTAE 344
Query: 431 HYACLVDVMSRAGQLQRACEIIR 453
HYAC+VD+ SR G+L+ A +++
Sbjct: 345 HYACMVDLFSRCGRLEEALQLLE 367
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 107/240 (44%), Gaps = 20/240 (8%)
Query: 47 FSRAGNITAARQVF-DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM-PMKNVVSWNA 104
+ + G ++ A VF + +D TWN M++ + +G + F M +N + +
Sbjct: 146 YVKCGTMSQALSVFSNHNAPRDSATWNLMISGFGKAGLYSEAVHCFREMLKYRNGIELDH 205
Query: 105 M-----VAGC-VQNDMLD----EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFK 154
M ++ C + D+L F + +A NA+I + K G L D++ +FK
Sbjct: 206 MTLPSILSACGKEGDLLKVKEVHGFIVRNFGFDADAPIGNALIDNYGKCGSLKDSENIFK 265
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGG-GIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
+ N+V++T MI Y +G + + D R N V+ T ++ GL ++
Sbjct: 266 TVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMMDEGFRPNAVTLTAILASCSHCGLLDQ 325
Query: 214 AWELFGRMPQKNVVASTA-----MITGFCKQGKVDEAWTLFQQIRCRDIAS--WNIMITG 266
++FG M + TA M+ F + G+++EA L ++++ + W ++ G
Sbjct: 326 GKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRLEEALQLLERMKSSSVTGSMWGALLAG 385
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D N I + + G++ + +F + ++VTW +M++ Y G Q S LF+ M
Sbjct: 240 DAPIGNALIDNYGKCGSLKDSENIFKTVCYVNLVTWTTMISCYGMHGKGQESVVLFEKMM 299
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEAFNYFAAM-----PERNAASYNAMISGFIKFGRL 146
+ N V+ A++A C +LD+ F +M E A Y M+ F + GRL
Sbjct: 300 DEGFRPNAVTLTAILASCSHCGLLDQGKKIFGSMISDYGLEPTAEHYACMVDLFSRCGRL 359
Query: 147 CDAQRLFKEMPCPNVV 162
+A +L + M +V
Sbjct: 360 EEALQLLERMKSSSVT 375
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 147/257 (57%)
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
++ +I+ + G A ++F M ++V++ ++I G+ K G+++ A LF + R
Sbjct: 147 ITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVR 206
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
I SW MITGY + G +AL++F +M G++PD++ +++ ACA L L+ G+ +
Sbjct: 207 TIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIH 266
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
K+GF + NAL+ MY+KCG I ++ F Q + D++SW+T+I A H Y
Sbjct: 267 MYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGY 326
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
+A F++M V V P+ ITFL +L C G DE + F++M Y I P EHY CL
Sbjct: 327 EAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCL 386
Query: 436 VDVMSRAGQLQRACEII 452
+D++ R+G L +A + I
Sbjct: 387 IDLLGRSGCLGQALDTI 403
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 141/313 (45%), Gaps = 44/313 (14%)
Query: 69 VTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER 128
+T N+++ Y G ++ +F+ M ++V+SWN+++ G V+ ++ A F MP R
Sbjct: 147 ITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVR 206
Query: 129 NAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARAR 184
S+ MI+G+ + G DA +F+EM P+ +S ++ ++ G + +
Sbjct: 207 TIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQL---GALEVGK 263
Query: 185 ALFDAMPRRNEVSWTVMINGLVEN----GLYEEAWELFGRMPQKNVVASTAMITGFCKQG 240
+ + + T + N L+E G +EAW LF ++ +K+V++ + MI G G
Sbjct: 264 WIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHG 323
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
K G EA+ LF +M + + P+++ F+ +
Sbjct: 324 K-------------------------------GYEAIQLFEEMCKVRVAPNEITFLGVLL 352
Query: 301 ACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDI 358
AC+ L D+G + + + + + ++ L+ + + G + + + +PD
Sbjct: 353 ACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDS 412
Query: 359 VSWNTIIAAFAQH 371
WN+++++ H
Sbjct: 413 RIWNSLLSSCRIH 425
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 33/284 (11%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N I +++ G++T A +VF++M +DV++WNS++ Y G +R LFD MP++ +V
Sbjct: 150 NALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIV 209
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRL---------C 147
SW M+ G + +A + F M E + S A++ + G L
Sbjct: 210 SWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYA 269
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
D ++ N +I+ Y K G I A LFD + ++ +SW+ MI GL
Sbjct: 270 DKNGFLRKTGICN-----ALIEMYAKC---GCIDEAWNLFDQLVEKDVISWSTMIGGLAN 321
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGF---CKQ-GKVDEAWTLFQQIRCR-----DIA 258
+G EA +LF M + V + G C G DE F + +I
Sbjct: 322 HGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIE 381
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ +I ++G +AL+ S+M ++PD I+ SL ++C
Sbjct: 382 HYGCLIDLLGRSGCLGQALDTISKM---PIKPDSRIWNSLLSSC 422
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
+ Q N + T M+ G V A LF+Q+ +I ++N +I YA N A+++F
Sbjct: 38 LSQSNFLV-TKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVF 96
Query: 281 SQMVRTGMQ---PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
QM+ PD F + +C + G Q + LV K G D NAL+ MY
Sbjct: 97 VQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMY 156
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD--------------- 382
+K G + ++ F + S D++SWN++I + + AR FD
Sbjct: 157 TKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMIT 216
Query: 383 ----------------QMIAVGVRPDGITFLSLLSVCCRAGKID 410
+M VG+ PD I+ +++L C + G ++
Sbjct: 217 GYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALE 260
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 147/257 (57%)
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
++ +I+ + G A ++F M ++V++ ++I G+ K G+++ A LF + R
Sbjct: 147 ITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVR 206
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
I SW MITGY + G +AL++F +M G++PD++ +++ ACA L L+ G+ +
Sbjct: 207 TIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIH 266
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
K+GF + NAL+ MY+KCG I ++ F Q + D++SW+T+I A H Y
Sbjct: 267 MYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGY 326
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
+A F++M V V P+ ITFL +L C G DE + F++M Y I P EHY CL
Sbjct: 327 EAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCL 386
Query: 436 VDVMSRAGQLQRACEII 452
+D++ R+G L +A + I
Sbjct: 387 IDLLGRSGCLGQALDTI 403
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 141/313 (45%), Gaps = 44/313 (14%)
Query: 69 VTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER 128
+T N+++ Y G ++ +F+ M ++V+SWN+++ G V+ ++ A F MP R
Sbjct: 147 ITENALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVR 206
Query: 129 NAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARAR 184
S+ MI+G+ + G DA +F+EM P+ +S ++ ++ G + +
Sbjct: 207 TIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQL---GALEVGK 263
Query: 185 ALFDAMPRRNEVSWTVMINGLVEN----GLYEEAWELFGRMPQKNVVASTAMITGFCKQG 240
+ + + T + N L+E G +EAW LF ++ +K+V++ + MI G G
Sbjct: 264 WIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHG 323
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
K G EA+ LF +M + + P+++ F+ +
Sbjct: 324 K-------------------------------GYEAIQLFEEMCKVRVAPNEITFLGVLL 352
Query: 301 ACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDI 358
AC+ L D+G + + + + + ++ L+ + + G + + + +PD
Sbjct: 353 ACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDS 412
Query: 359 VSWNTIIAAFAQH 371
WN+++++ H
Sbjct: 413 RIWNSLLSSCRIH 425
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 129/284 (45%), Gaps = 33/284 (11%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N I +++ G++T A +VF++M +DV++WNS++ Y G +R LFD MP++ +V
Sbjct: 150 NALIDMYTKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIV 209
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRL---------C 147
SW M+ G + +A + F M E + S A++ + G L
Sbjct: 210 SWTTMITGYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYA 269
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
D ++ N +I+ Y K G I A LFD + ++ +SW+ MI GL
Sbjct: 270 DKNGFLRKTGICN-----ALIEMYAKC---GCIDEAWNLFDQLVEKDVISWSTMIGGLAN 321
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGF---CKQ-GKVDEAWTLFQQIRCR-----DIA 258
+G EA +LF M + V + G C G DE F + +I
Sbjct: 322 HGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIE 381
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ +I ++G +AL+ S+M ++PD I+ SL ++C
Sbjct: 382 HYGCLIDLLGRSGCLGQALDTISKM---PIKPDSRIWNSLLSSC 422
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
+ Q N + T M+ G V A LF+Q+ +I ++N +I YA N A+++F
Sbjct: 38 LSQSNFLV-TKMLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVF 96
Query: 281 SQMVRTGMQ---PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
QM+ PD F + +C + G Q + LV K G D NAL+ MY
Sbjct: 97 VQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMY 156
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD--------------- 382
+K G + ++ F + S D++SWN++I + + AR FD
Sbjct: 157 TKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMIT 216
Query: 383 ----------------QMIAVGVRPDGITFLSLLSVCCRAGKID 410
+M VG+ PD I+ +++L C + G ++
Sbjct: 217 GYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALE 260
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 212/471 (45%), Gaps = 89/471 (18%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
K V N+++ Y GF +++ +FD MP +++ SWN +++ VQ M D+ F F M
Sbjct: 198 KSVFVSNALMLFYSKCGFYKNAFKVFDEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDM 257
Query: 126 ------------------------------------------PERNAASYNAMISGFIKF 143
E N NA+I + F
Sbjct: 258 LVIDGLKVDYFTLSTFLTACAASGLLMEGKQVHAHAVKVGLEDELNVG--NALIGFYTNF 315
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
G + D LF+ M +V+++T M+ Y+ E G + +FD MP +N V++ V+++
Sbjct: 316 GDIDDVVCLFERMSVRDVITWTEMVRVYM---EFGFVDLGLKIFDEMPEKNCVTYNVLLS 372
Query: 204 GLVENGLYEEAWELFGRMPQK--------------------------------------- 224
GL N +A ELF RM ++
Sbjct: 373 GLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGINACSLLADYRVSRQMHGFAIKFGFGS 432
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS-QM 283
NV A++ + + G++ +A +++++ W M+ GYA+NG+ EA +LF
Sbjct: 433 NVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMMCGYARNGQPREAFSLFHLGH 492
Query: 284 VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSI 343
+ D++ S+ + C ++ D G+Q + V+K GF S++ V N +V MY KCG++
Sbjct: 493 SEWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNV 552
Query: 344 VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
D+ F + DIVSWNT+I+ + H +A + +M G++PD ITF+ ++S
Sbjct: 553 DDAIKMFSGMASTDIVSWNTLISGYLTHRQGDRALEIWLKMQEEGIKPDDITFVLIISAY 612
Query: 404 CRAG--KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+ +D+ LFN M Y I P S+HY+ + V+ G L+ A E I
Sbjct: 613 RQTSLNLVDDCRILFNSMKTVYHIEPTSQHYSSFISVLGHWGLLEEALETI 663
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 142/323 (43%), Gaps = 53/323 (16%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
N I ++ G+I +F++M +DV+TW M+ Y GF +FD MP KN
Sbjct: 305 GNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGFVDLGLKIFDEMPEKNC 364
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP-- 157
V++N +++G +N +A F M E + +S I L R+ ++M
Sbjct: 365 VTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELTDFSLSSGINACSLLADYRVSRQMHGF 424
Query: 158 ------CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
NV ++D Y + G + A +++ + + V WT M+ G NG
Sbjct: 425 AIKFGFGSNVFVEGALLDMYTRC---GRMVDAEKMWEELEEVSSVVWTSMMCGYARNGQP 481
Query: 212 EEAWELF--GRMPQKNV---VASTAMIT---------------------GF--------- 236
EA+ LF G K + VA T+M++ GF
Sbjct: 482 REAFSLFHLGHSEWKLIMDEVALTSMLSLCGTVGYHDMGKQIHCQVLKFGFHSNVQVGNV 541
Query: 237 -----CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
K G VD+A +F + DI SWN +I+GY + +G+ AL ++ +M G++PD
Sbjct: 542 VVEMYFKCGNVDDAIKMFSGMASTDIVSWNTLISGYLTHRQGDRALEIWLKMQEEGIKPD 601
Query: 292 DLIFVSLFTAC--ASLALLDQGR 312
D+ FV + +A SL L+D R
Sbjct: 602 DITFVLIISAYRQTSLNLVDDCR 624
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR-TG 287
+TA+I+ + A LF +I S++ +I+ ++++ R +++L LF M+ +
Sbjct: 101 TTALISTYINLRLFSYAHRLFLSQSPPNIVSYSALISAFSKSNREKQSLFLFLHMITVSS 160
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
++P+ +V++ TAC + L G Q +A VIK G+ + V+NAL+ YSKCG ++
Sbjct: 161 LRPNHYTYVAVLTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAF 220
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKA-RSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F + + DI SWNT+++ Q +Y R + D ++ G++ D T + L+ C +
Sbjct: 221 KVFDEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAAS 280
Query: 407 GKIDE 411
G + E
Sbjct: 281 GLLME 285
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 196/429 (45%), Gaps = 61/429 (14%)
Query: 85 QHSRALFDAMPMKNVV-SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKF 143
QHS LF+++P +W++++ + +L +F+ F +M + + +K
Sbjct: 60 QHSLHLFNSLPSPPPPLAWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKA 119
Query: 144 GRLCDAQRLFKEMPC--------PNVVSYTVMIDGYVKVKEGG------------GIARA 183
L +L + ++ +I+ Y K G GI
Sbjct: 120 STLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCV 179
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------------- 224
+ +FD MP R+ VSW +I G +NG+Y EA ++ M +
Sbjct: 180 KKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAE 239
Query: 225 ---------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
+V +++I + K +++ + F + +D SWN +
Sbjct: 240 HVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSI 299
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I G QNG + L F +M++ ++P + F S+ ACA L L GRQ + +++ GF
Sbjct: 300 IAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGF 359
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
D + + ++LV MY+KCG+I + F + + D+V+W II A H A S F+
Sbjct: 360 DDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFEN 419
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
M+ GVRP + F+++L+ C AG +DE FN M D+GI P EHYA + D++ RAG
Sbjct: 420 MLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAG 479
Query: 444 QLQRACEII 452
+L+ A + I
Sbjct: 480 RLEEAYDFI 488
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 172/404 (42%), Gaps = 72/404 (17%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+Y AN I +++ N A +VFD P + + + + +FD MP
Sbjct: 144 DLYIANALINTYAKFHN---AGKVFDVFPKRGESGIDCV-------------KKVFDMMP 187
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIK--FGRLCDAQRLF 153
+++VVSWN ++AG QN M EA + M + ++ I F D +
Sbjct: 188 VRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNK-G 246
Query: 154 KEMPC--------PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
KE+ +V + +ID Y K RA F +PR++ +SW +I G
Sbjct: 247 KEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRA---FYILPRKDAISWNSIIAGC 303
Query: 206 VENGLYEEAWELFGRMPQKNV--------------------------------------- 226
V+NG ++ F RM ++NV
Sbjct: 304 VQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNE 363
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT 286
+++++ + K G + A +F +I RD+ +W +I G A +G +A++LF M+
Sbjct: 364 FIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLED 423
Query: 287 GMQPDDLIFVSLFTACASLALLDQG-RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
G++P + F+++ TAC+ L+D+G R ++ G L A+ + + G + +
Sbjct: 424 GVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEE 483
Query: 346 SE--LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
+ ++ + QP W+ ++AA H A D++++V
Sbjct: 484 AYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSV 527
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 225/471 (47%), Gaps = 54/471 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF---- 91
D + A I ++++ I AR VFDK+P K+ +WNSM+ AY + +LF
Sbjct: 83 DNFIATKLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMIIAYTSKSLFNDALSLFASFV 142
Query: 92 ---------DAMPMKNV-----------------VSWNAMVAG-----CVQNDM------ 114
D M ++ + +A++ G CV N +
Sbjct: 143 SSTDNNVSPDNFTMTSILKTLALSSSVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCR 202
Query: 115 ---LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM-------PCPNVVSY 164
++ A F M ER+ ++NAMI G+ + G + +RL+ EM PN V+
Sbjct: 203 CGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTI 262
Query: 165 TVMIDGYVKVKE-GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ 223
++ + K+ G+ R + D + +I + G A ELF M +
Sbjct: 263 GSVMQACGQSKDLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMGE 322
Query: 224 KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
K+ V+ ++I+G+ G VDEA + + I +++WN +I G QN + E AL+L +M
Sbjct: 323 KDEVSYRSIISGYMINGFVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVREM 382
Query: 284 VRTGM--QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
G+ +P+ + S+ + + L ++ + I+ +D ++ V A+V Y+K G
Sbjct: 383 PGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYAKLG 442
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
I + F Q+ ++ W +II A+A H A ++QM+ G++PD +T S+L+
Sbjct: 443 FIHLARRVFDQSQSRSLIIWTSIIYAYASHGDASLALGLYNQMLDRGIQPDPVTLTSVLT 502
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C +G ++E+ ++FN M +GI P EHYAC+V V+SRAG+L A + I
Sbjct: 503 ACAHSGLVNEAWDVFNAMPSKHGIQPVVEHYACMVGVLSRAGKLSEAEKFI 553
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 205/473 (43%), Gaps = 61/473 (12%)
Query: 2 LSSIIVSIALKPTPS-STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVF 60
++SI+ ++AL + +A+ H + +S DV N + + R G I AR+VF
Sbjct: 156 MTSILKTLALSSSVCYKSAKQIHCSALLRGFYS--DVCVLNALVTCYCRCGRIEIARKVF 213
Query: 61 DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM-------PMKNVVSWNAMVAGCVQND 113
D+M +D+VTWN+M+ Y SGF + + L+ M + N V+ +++ C Q+
Sbjct: 214 DEMTERDIVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSK 273
Query: 114 MLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMID 169
L M E + NA+I+ + K G L A+ LF EM + VSY +I
Sbjct: 274 DLSFGMEVHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIIS 333
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP------- 222
GY+ G + A + + +W +I G+V+N +E A +L MP
Sbjct: 334 GYMI---NGFVDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLK 390
Query: 223 ----------------------------------QKNVVASTAMITGFCKQGKVDEAWTL 248
+N+ +TA++ + K G + A +
Sbjct: 391 PNVVTLSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRV 450
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F Q + R + W +I YA +G AL L++QM+ G+QPD + S+ TACA L+
Sbjct: 451 FDQSQSRSLIIWTSIIYAYASHGDASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLV 510
Query: 309 DQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIA 366
++ + A+ KHG + +V + S+ G + ++E + +P W ++
Sbjct: 511 NEAWDVFNAMPSKHGIQPVVEHYACMVGVLSRAGKLSEAEKFISKMPFEPTAKVWGALLN 570
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+ + + D + + G ++ + ++ RAG+ +E+ + M
Sbjct: 571 GASIYDDVEIGKFACDHLFEIEPEHTG-NYIIMANLYSRAGRWEEARKIRERM 622
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 11/141 (7%)
Query: 279 LFSQMVRT-GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
L + +++T G D + S C + L+ QG+Q +A D + L+T Y
Sbjct: 35 LKTNLLKTHGGGLDIAAYGSAIQHCTNHRLIRQGKQLHARFFPFAITPDNFIATKLITFY 94
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV---GVRPDGI 394
+K I ++ F + + SWN++I A+ L+ A S F ++ V PD
Sbjct: 95 AKSNLIRNARNVFDKIPHKNSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDNF 154
Query: 395 TFLSLL-------SVCCRAGK 408
T S+L SVC ++ K
Sbjct: 155 TMTSILKTLALSSSVCYKSAK 175
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 173/336 (51%), Gaps = 17/336 (5%)
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
+++++I+ + K C A+++F E P +SY MI GY I A LF M
Sbjct: 96 THSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTN---NMMIVEAIKLFRRML 152
Query: 192 RRNE--VSWTVMINGLVENGLYEEAWEL--------FGRMPQKNVVASTAMITGFCKQGK 241
N V+ M+ GLV L E L F + ++ + +T + K G+
Sbjct: 153 CENRFFVNSVTML-GLVSGILVPEKLRLGFCLHGCCFKFGFENDLSVGNSFLTMYVKCGE 211
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFT 300
V+ +F +I +D+ +WN MI+GYAQNG L ++ +M + G + PD + + +
Sbjct: 212 VEYGRKVFDEILVKDLITWNAMISGYAQNGHARRVLEIYREMRKVGGVNPDPVTLLGVLC 271
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG--QTSQPDI 358
+CA+L GR+ + + GF S+ + NAL+ MY++CG++V + F +
Sbjct: 272 SCANLGAQGIGREVEKEIDRFGFRSNSFLMNALINMYARCGNLVRAREVFDCMDERSKSV 331
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
VSW II + H A FD M+ GV+PD F+S+LS C AG ++ + F+
Sbjct: 332 VSWTAIIGGYGIHGEGETAVELFDVMVRSGVKPDRTVFVSVLSACSHAGLTEKGLEYFDE 391
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
M YG+ P EHY+CLVD++ R+G+L+ A ++I L
Sbjct: 392 MERKYGLQPGPEHYSCLVDLLGRSGRLKEAMDLIDL 427
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 191/420 (45%), Gaps = 32/420 (7%)
Query: 5 IIVSIALKPTP-SSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKM 63
++ S AL P + + H+H L K S D Y + I +S+ AR+VFD+
Sbjct: 65 LLKSCALLSLPFTGSQLHSHIL----KTGSQPDPYTHSSLINMYSKTSLPCLARKVFDES 120
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-----NVVSWNAMVAGCVQNDMLDEA 118
P +++N+M++ Y ++ + LF M + N V+ +V+G + + L
Sbjct: 121 PVNLTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFVNSVTMLGLVSGILVPEKLRLG 180
Query: 119 FNY----FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV 174
F F E + + N+ ++ ++K G + +++F E+ +++++ MI GY
Sbjct: 181 FCLHGCCFKFGFENDLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYA-- 238
Query: 175 KEGGGIARARALFDAMPRRNEVSW-TVMINGLV-------ENGLYEEAWELFGRMP-QKN 225
+ G R ++ M + V+ V + G++ G+ E + R + N
Sbjct: 239 -QNGHARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDRFGFRSN 297
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
A+I + + G + A +F + R + + SW +I GY +G GE A+ LF M
Sbjct: 298 SFLMNALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVM 357
Query: 284 VRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGS 342
VR+G++PD +FVS+ +AC+ L ++G + + + K+G + LV + + G
Sbjct: 358 VRSGVKPDRTVFVSVLSACSHAGLTEKGLEYFDEMERKYGLQPGPEHYSCLVDLLGRSGR 417
Query: 343 IVDS-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+ ++ +L +PD W ++ A H A F +I + P I + LLS
Sbjct: 418 LKEAMDLIDLMKVKPDGPVWGALLGACKIHRNVELAEVAFQHVIE--LEPTNIGYYVLLS 475
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 65/129 (50%)
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+WN + ++ + EAL ++ M+R+ P+ F L +CA L+L G Q ++
Sbjct: 25 TAWNCYLRELSKQRKFMEALTVYRHMLRSSFFPNTFTFPVLLKSCALLSLPFTGSQLHSH 84
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
++K G D +++L+ MYSK + F ++ +S+N +I+ + +++ +A
Sbjct: 85 ILKTGSQPDPYTHSSLINMYSKTSLPCLARKVFDESPVNLTISYNAMISGYTNNMMIVEA 144
Query: 378 RSYFDQMIA 386
F +M+
Sbjct: 145 IKLFRRMLC 153
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 195/411 (47%), Gaps = 52/411 (12%)
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMI---S 138
++R LFD P ++ WNA++ +N+M + M + ++ ++ S
Sbjct: 97 YARKLFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLHPDKFTFPCVLKACS 156
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV-KEGGGIARARALFDAMPRRNEVS 197
+ FG C + + S+ + +G V + + G I AR +FD + R VS
Sbjct: 157 ELLDFGLSC---LVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVS 213
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNVVAS---------------------------- 229
WT +++G +NG EA +F +M + +V
Sbjct: 214 WTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCII 273
Query: 230 -----------TAMITGFCKQGKVDEAWTLFQQIRCRD-IASWNIMITGYAQNGRGEEAL 277
++ + K G+V A + F +++ + + WN MI+GYA+NG EEA+
Sbjct: 274 KMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEEAV 333
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
LF M+ ++PD + S ACA + L + V K + D+ VN L+ MY
Sbjct: 334 ELFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLIDMY 393
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
+KCGS+ + L F + S D+V W+ +I + H ++A + M GV P+ +TF+
Sbjct: 394 AKCGSVESARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFI 453
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
LL+ C +G I + LF+ M D+GI PR+EHY+C+VD++ RAG L++A
Sbjct: 454 GLLTACSHSGLIKQGWELFHCM-RDFGIKPRNEHYSCVVDLLGRAGYLKQA 503
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 169/370 (45%), Gaps = 27/370 (7%)
Query: 21 HTHFLLV-FAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYW 79
H H ++ F H V+ N +A +++ G I AR VFD++ + +V+W ++++ Y
Sbjct: 168 HAHVIVYGFGSH-----VFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWTAIVSGYG 222
Query: 80 HSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAA 131
+G P + +FD M +V +S +++ D L++ + + E
Sbjct: 223 QNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIKMGLEEEPD 282
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPCPN-VVSYTVMIDGYVKVKEGGGIARARALFDAM 190
++ + + K G + A+ F +M PN V+ + MI GY K G A LF AM
Sbjct: 283 LLISLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAK---NGHAEEAVELFQAM 339
Query: 191 PRRNEVSWTVMINGLV-----ENGLYEEAW-ELFGRMPQ--KNVVASTAMITGFCKQGKV 242
RN ++ + V L W + + R + ++ +T +I + K G V
Sbjct: 340 ISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLIDMYAKCGSV 399
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ A +F + +D+ W+ MI GY +G+G EA+ L+ M + G+ P+D+ F+ L TAC
Sbjct: 400 ESARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDVTFIGLLTAC 459
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL-AFGQTSQPDIVSW 361
+ L+ QG + + + G + +V + + G + + + +P + W
Sbjct: 460 SHSGLIKQGWELFHCMRDFGIKPRNEHYSCVVDLLGRAGYLKQAYVFILKMPIEPGVSVW 519
Query: 362 NTIIAAFAQH 371
+++A H
Sbjct: 520 GALLSACKIH 529
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
Q N T ++ G++ A LF + D+ WN +I Y++N + ++
Sbjct: 76 QHNRFLMTKLVNQSSNLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRW 135
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M G+ PD F + AC+ L +A VI +GF S + V N LV +Y+KCG
Sbjct: 136 MKWVGLHPDKFTFPCVLKACSELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGR 195
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
I + + F + IVSW I++ + Q+ ++A FDQM V+PD I+ +S++
Sbjct: 196 IGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRA 255
Query: 403 CCRAGKIDESMNLFNLMV 420
+++ +L ++
Sbjct: 256 YTDVDDLEQGRSLHGCII 273
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 208/438 (47%), Gaps = 34/438 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD----------A 93
I +S+ I +R +FD KD V+WNS+++AY G +F A
Sbjct: 84 INMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYA 143
Query: 94 MPMKNVVSWNAMVAGCVQNDM----LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
+ S CV ++ L F + + N A++ + K G L DA
Sbjct: 144 FSDYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLGL-DFNVVVATALLDMYAKSGCLRDA 202
Query: 150 QRLFK--EMPCPNVVSYTVMIDGYVKVKEGGGIA-----RARALFDAMPRR----NEVSW 198
R+F+ ++ N Y MI G+++ GG+ A +F+ M R ++ ++
Sbjct: 203 VRVFEGFDLKSKNDFMYNAMIAGFLR----GGLCCENAREAVRVFNEMRRMGVKCSKFTF 258
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRC 254
+ ++ V NG +E ++ G++ + ++ +++++ + G++D+ F+
Sbjct: 259 SSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPK 318
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
D+ SW I G +NG+ E L+LF + + G + D+ I S+ ACA +A G Q
Sbjct: 319 LDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQI 378
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+K G V N + MY+K G I + F +T +PD+VSW+ +I ++AQH
Sbjct: 379 QGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFA 438
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
++ F+ M G+ P+ IT L +L+ C G +DE + + M DYG+ +H AC
Sbjct: 439 KESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSAC 498
Query: 435 LVDVMSRAGQLQRACEII 452
+VD++ RAG+L+ A I
Sbjct: 499 IVDLLGRAGRLEEAQRFI 516
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N I ++++G+I +AR F + DVV+W+ M+ +Y GF + S LF+ M + +V
Sbjct: 395 NTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIV 454
Query: 101 SWNAMVAG----CVQNDMLDEAFNYFAAMPERNAASYNAMISGFI-----KFGRLCDAQR 151
+ G C ++DE Y+ M + + N S I + GRL +AQR
Sbjct: 455 PNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEAQR 514
Query: 152 L 152
Sbjct: 515 F 515
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE---EALNLFSQMVRTG 287
++I + K ++ + LF +D SWN +I+ YA+ G E L +M R G
Sbjct: 82 SLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFG 141
Query: 288 MQPDDLIFVSLFTACASLALLDQ---GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
D S+ AC + D GR + IK G D ++ V AL+ MY+K G +
Sbjct: 142 YAFSDYTLSSVLNACC-FCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLR 200
Query: 345 DSEL---AFGQTSQPDIVSWNTIIAAFAQHVL----YYKARSYFDQMIAVGVRPDGITFL 397
D+ F S+ D + +N +IA F + L +A F++M +GV+ TF
Sbjct: 201 DAVRVFEGFDLKSKNDFM-YNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFS 259
Query: 398 SLLSVCCRAGKID 410
S++ C G +
Sbjct: 260 SVVKACVGNGDFE 272
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGF-DSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
+L + CA L G+ +A ++ +GF + S N+L+ MYSKC I S F +
Sbjct: 44 LTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNS 103
Query: 354 SQPDIVSWNTIIAAFAQ---HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
S D VSWN+II+A+A+ Y + +M G T S+L+ CC +D
Sbjct: 104 SIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFC--VD 161
Query: 411 ESMNLFNLMVHDYGIPPRSEH----YACLVDVMSRAGQLQRACEI 451
++ + ++H +GI + L+D+ +++G L+ A +
Sbjct: 162 DNC-FYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRV 205
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 118/438 (26%), Positives = 208/438 (47%), Gaps = 34/438 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD----------A 93
I +S+ I +R +FD KD V+WNS+++AY G +F A
Sbjct: 84 INMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYA 143
Query: 94 MPMKNVVSWNAMVAGCVQNDM----LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
+ S CV ++ L F + + N A++ + K G L DA
Sbjct: 144 FSDYTLSSVLNACCFCVDDNCFYGRLIHGFGIKLGL-DFNVVVATALLDMYAKSGCLRDA 202
Query: 150 QRLFK--EMPCPNVVSYTVMIDGYVKVKEGGGIA-----RARALFDAMPRR----NEVSW 198
R+F+ ++ N Y MI G+++ GG+ A +F+ M R ++ ++
Sbjct: 203 VRVFEGFDLKSKNDFMYNAMIAGFLR----GGLCCENAREAVRVFNEMRRMGVKCSKFTF 258
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRC 254
+ ++ V NG +E ++ G++ + ++ +++++ + G++D+ F+
Sbjct: 259 SSVVKACVGNGDFEVGRQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPK 318
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
D+ SW I G +NG+ E L+LF + + G + D+ I S+ ACA +A G Q
Sbjct: 319 LDVVSWTSAIAGCVKNGKFENGLSLFYRFLADGRKLDEFIVSSVMGACADMAAARTGEQI 378
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+K G V N + MY+K G I + F +T +PD+VSW+ +I ++AQH
Sbjct: 379 QGYALKFGVADFTVVKNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFA 438
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
++ F+ M G+ P+ IT L +L+ C G +DE + + M DYG+ +H AC
Sbjct: 439 KESLRLFELMTVSGIVPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSAC 498
Query: 435 LVDVMSRAGQLQRACEII 452
+VD++ RAG+L+ A I
Sbjct: 499 IVDLLGRAGRLEEAQRFI 516
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N I ++++G+I +AR F + DVV+W+ M+ +Y GF + S LF+ M + +V
Sbjct: 395 NTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGIV 454
Query: 101 SWNAMVAG----CVQNDMLDEAFNYFAAMPERNAASYNAMISGFI-----KFGRLCDAQR 151
+ G C ++DE Y+ M + + N S I + GRL +AQR
Sbjct: 455 PNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEAQR 514
Query: 152 L 152
Sbjct: 515 F 515
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 15/193 (7%)
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE---EALNLFSQMVRTG 287
++I + K ++ + LF +D SWN +I+ YA+ G E L +M R G
Sbjct: 82 SLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFG 141
Query: 288 MQPDDLIFVSLFTACASLALLDQ---GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
D S+ AC + D GR + IK G D ++ V AL+ MY+K G +
Sbjct: 142 YAFSDYTLSSVLNACC-FCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLR 200
Query: 345 DSEL---AFGQTSQPDIVSWNTIIAAFAQHVL----YYKARSYFDQMIAVGVRPDGITFL 397
D+ F S+ D + +N +IA F + L +A F++M +GV+ TF
Sbjct: 201 DAVRVFEGFDLKSKNDFM-YNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFS 259
Query: 398 SLLSVCCRAGKID 410
S++ C G +
Sbjct: 260 SVVKACVGNGDFE 272
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGF-DSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
+L + CA L G+ +A ++ +GF + S N+L+ MYSKC I S F +
Sbjct: 44 LTTLLSFCAKTKNLRLGQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNS 103
Query: 354 SQPDIVSWNTIIAAFAQ---HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
S D VSWN+II+A+A+ Y + +M G T S+L+ CC +D
Sbjct: 104 SIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCFC--VD 161
Query: 411 ESMNLFNLMVHDYGIPPRSEH----YACLVDVMSRAGQLQRACEI 451
++ + ++H +GI + L+D+ +++G L+ A +
Sbjct: 162 DNC-FYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRV 205
>Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:49468862-49466962 | 20130731
Length = 589
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 179/329 (54%), Gaps = 29/329 (8%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
N +I+ ++K ++ A +LF EM PNVVS+++++ GYV+ G A LF M
Sbjct: 62 NNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVR---QGQPNIALCLFHQMQGT 118
Query: 194 ----NEVSWTVMINGL-----VENGLYEEAW-ELFGRMPQKNVVASTAMITGFCKQGKVD 243
NE +++ +IN +E G A E+FG + ++V +++I + K +VD
Sbjct: 119 LVMPNEFTFSTLINACSILANLETGRRIHALVEVFGY--RSDLVVCSSLIDMYGKCNRVD 176
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM-QPDDLIFVSLFTAC 302
EA +F + R++ SW MIT Y+QNG+G AL LF + M +P+ + S TAC
Sbjct: 177 EAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCSAVTAC 236
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
ASL L G+ T+ +VI+ G D+ V +ALV MY+KCG + S+ F + P +V +
Sbjct: 237 ASLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGCVTYSDKVFRRIVNPSVVPYT 296
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
++I A++ L + F +M+ ++P+ ITF+ +L +LFN M
Sbjct: 297 SMIVGAAKYGLGTLSLRLFQEMVDRRIKPNSITFVGVL-------------HLFNSMNEK 343
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEI 451
YG+ P + HY C+VD++ R G++ A ++
Sbjct: 344 YGVMPDARHYTCIVDMLGRVGRIDEAYQL 372
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 164/388 (42%), Gaps = 61/388 (15%)
Query: 15 PSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSM 74
PS+T H + + K S D + N I ++ + I A ++FD+M +VV+W+ +
Sbjct: 40 PSATPTHANVV----KSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLL 95
Query: 75 LTAYWHSGFPQHSRALFDAMP----MKNVVSWNAMVAGCV---------QNDMLDEAFNY 121
+ Y G P + LF M M N +++ ++ C + L E F Y
Sbjct: 96 MAGYVRQGQPNIALCLFHQMQGTLVMPNEFTFSTLINACSILANLETGRRIHALVEVFGY 155
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
+ + +++I + K R+ +AQ +F M NVVS+T MI Y + +G
Sbjct: 156 RSDL-----VVCSSLIDMYGKCNRVDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLAL 210
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV--------------V 227
+ F+ + R N+ + ++ + + A GR+ + V
Sbjct: 211 QLFREFNHI-RMNKPNHFMLCSAVT-------ACASLGRLGSGKITHGVVIRLGHDASDV 262
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
++A++ + K G V + +F++I + + MI G A+ G G +L LF +MV
Sbjct: 263 VASALVDMYAKCGCVTYSDKVFRRIVNPSVVPYTSMIVGAAKYGLGTLSLRLFQEMVDRR 322
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
++P+ + FV + L L + + Y G D +V M + G I D
Sbjct: 323 IKPNSITFVGV------LHLFNSMNEKY------GVMPDARHYTCIVDMLGRVGRI-DEA 369
Query: 348 LAFGQT----SQPDIVSWNTIIAAFAQH 371
Q+ S+ D + W T+++A H
Sbjct: 370 YQLAQSVQVGSEDDALLWGTLLSASRLH 397
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 5/137 (3%)
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
T+A V+K G +D N L+ Y K I + F + S P++VSW+ ++A + +
Sbjct: 45 THANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQ 104
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
A F QM V P+ TF +L++ C + E+ + +V +G RS+
Sbjct: 105 PNIALCLFHQMQGTLVMPNEFTFSTLINACSILANL-ETGRRIHALVEVFGY--RSDLVV 161
Query: 434 C--LVDVMSRAGQLQRA 448
C L+D+ + ++ A
Sbjct: 162 CSSLIDMYGKCNRVDEA 178
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 204/426 (47%), Gaps = 44/426 (10%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS-------------- 101
A +F ++ + +V +NSM+ Y S P S L+ M ++N S
Sbjct: 60 ANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQM-LQNGYSPDHFTFPFVLKACS 118
Query: 102 --WNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
++ + CV + +L F E N +++ +++ + ++F ++P
Sbjct: 119 FIYDQVSGKCVHSCILKSGF-------EANVYVATGLLNMYVECKNMESGLKVFDKIPKW 171
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN-EVSWTVMINGL------------- 205
NVV++T +I+GYV + A +F M R E + M+N L
Sbjct: 172 NVVAWTCLINGYVINDQP---REALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGR 228
Query: 206 -VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
V + + ++ F NV+ +TA++ + K G ++ A LF ++ R+I +WN MI
Sbjct: 229 WVHERVCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMI 288
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
Y Q R EAL LF M+ G PD F+S+ + CA +L G +A ++K
Sbjct: 289 NAYNQYERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMA 348
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQT-SQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
D+++ AL+ MY+K G + ++ F + + D+V W ++I A A H +A S F
Sbjct: 349 KDIALATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQI 408
Query: 384 MIA-VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
M + PD IT++ +L C G ++E+ FNLM YGI P EHY+C+VD++SRA
Sbjct: 409 MQEDSSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRA 468
Query: 443 GQLQRA 448
G + A
Sbjct: 469 GHFREA 474
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 161/364 (44%), Gaps = 32/364 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM- 94
+VY A + + N+ + +VFDK+P +VV W ++ Y + P+ + +F M
Sbjct: 141 NVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMG 200
Query: 95 ----PMKNVVSWNAMVAGC----------VQNDMLDEAFNYFAAMPERNAASYNAMISGF 140
V NA++A V + ++ F N A++ +
Sbjct: 201 RWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNSNVILATAIVEMY 260
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM------PRRN 194
K G L A+ LF +MP N+V++ MI+ Y + + A LF M P +
Sbjct: 261 AKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYN---EALGLFFYMLANGFCPDKA 317
Query: 195 EVSWTVMING---LVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQ 251
+ + ++ G A+ L M K++ +TA++ + K G++ A +F
Sbjct: 318 TFLSVLSVCARRCVLALGETVHAYLLKSNMA-KDIALATALLDMYAKNGELGSAQKIFNN 376
Query: 252 -IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR-TGMQPDDLIFVSLFTACASLALLD 309
+ +D+ W MI A +G G EAL+LF M + + PD + ++ + AC+ + L++
Sbjct: 377 SLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQEDSSLVPDHITYIGVLFACSHVGLVE 436
Query: 310 QGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSE-LAFGQTSQPDIVSWNTIIAA 367
+ ++ + L+ K +G + + +V + S+ G ++E L + +P+I W ++
Sbjct: 437 EAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFREAEKLMETMSIRPNIAIWGALLNG 496
Query: 368 FAQH 371
H
Sbjct: 497 CQIH 500
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 233 ITGFCKQGKVDEAWT----LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+ FC DE + LF+QI ++ +N MI GYA++ +L+L+ QM++ G
Sbjct: 44 LIDFCVDSHFDEYFNYANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGY 103
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
PD F + AC+ + G+ ++ ++K GF++++ V L+ MY +C ++
Sbjct: 104 SPDHFTFPFVLKACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLK 163
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGK 408
F + + ++V+W +I + + +A F +M GV + +T ++ L C R
Sbjct: 164 VFDKIPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTMVNALIACARCRD 223
Query: 409 ID 410
+D
Sbjct: 224 VD 225
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 117/265 (44%), Gaps = 34/265 (12%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
VFA S+ +V A + +++ G + AR++F+KMP +++V WN M+ AY
Sbjct: 242 FVFA---SNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQYERYN 298
Query: 86 HSRALFDAM------PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNA 135
+ LF M P K ++ ++++ C + +L A + + N A A
Sbjct: 299 EALGLFFYMLANGFCPDK--ATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATA 356
Query: 136 MISGFIKFGRLCDAQRLFKE-MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR- 193
++ + K G L AQ++F + +VV +T MI+ G A +LF M
Sbjct: 357 LLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGN---EALSLFQIMQEDS 413
Query: 194 ----NEVSWTVMINGLVENGLYEEAWELF-------GRMPQKNVVASTAMITGFCKQGKV 242
+ +++ ++ GL EEA + F G +P+K + M+ + G
Sbjct: 414 SLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKE--HYSCMVDLLSRAGHF 471
Query: 243 DEAWTLFQQIRCR-DIASWNIMITG 266
EA L + + R +IA W ++ G
Sbjct: 472 REAEKLMETMSIRPNIAIWGALLNG 496
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 178/345 (51%), Gaps = 8/345 (2%)
Query: 115 LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSYTVMIDG 170
+D ++ F+ + S+N +I G+ + +F +M P+ ++Y ++
Sbjct: 64 IDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKA 123
Query: 171 YVKV-KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS 229
++ K+ G++ + + +I+ G A ++F M KN+V+
Sbjct: 124 SARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSW 183
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
+M+ G+ K G++ A +F+ ++ RD+ SW+ I GY + G EA+ +F +M G +
Sbjct: 184 NSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPK 243
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
+++ VS+ +ACA L L +GR + +I + + + +LV MY+KCG+I ++
Sbjct: 244 ANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFV 303
Query: 350 FG--QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
F SQ D+ WN +I A H L ++ F +M G+R D IT+L LL+ C G
Sbjct: 304 FRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGG 363
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+ E+ N F +V G+ P SEHYAC+VDV++RAGQL A + I
Sbjct: 364 LVKEAWNFFESLV-KRGMTPTSEHYACMVDVLARAGQLTTAYQFI 407
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 193/429 (44%), Gaps = 56/429 (13%)
Query: 42 LNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM------- 94
L+ +A S +G+I + +VF ++ + + +WN ++ Y +S P HS ++F M
Sbjct: 53 LSFSALSNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAP 112
Query: 95 ----------------PMKNVVSWNAMVAGC-------VQNDMLDE---------AFNYF 122
K+ VS +A + +QN ++ A F
Sbjct: 113 DYLTYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVF 172
Query: 123 AAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR 182
+M +N S+N+M+ G+ K G + AQ++F+ M +V S++ IDGYVK G
Sbjct: 173 ESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVK---AGEYRE 229
Query: 183 ARALFDAM----PRRNEVSWTVMIN-----GLVENGLYEEAWELFGRMPQKNVVASTAMI 233
A A+F+ M P+ NEV+ +++ G ++ G + + +P +V T+++
Sbjct: 230 AMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPM-TMVLQTSLV 288
Query: 234 TGFCKQGKVDEAWTLFQQIRCR--DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
+ K G ++EA +F+ I D+ WN MI G A +G EE+L LF +M G++ D
Sbjct: 289 DMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSD 348
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
++ ++ L ACA L+ + + ++K G +V + ++ G + +
Sbjct: 349 EITYLCLLAACAHGGLVKEAWNFFESLVKRGMTPTSEHYACMVDVLARAGQLTTAYQFIC 408
Query: 352 QTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
Q +P I + H + A + ++I + DG ++ L +V + D
Sbjct: 409 QIPIEPTASMLGAIFSGCINHRNFDLAETVGRKLIELDPNNDG-RYIGLSNVYAVVKRWD 467
Query: 411 ESMNLFNLM 419
+S ++ M
Sbjct: 468 DSKSMREAM 476
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 121/251 (48%), Gaps = 32/251 (12%)
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ G +D ++ +F QI I SWNI+I GY+ + +L++F +M+R G+ PD L
Sbjct: 56 SALSNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYL 115
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
+ L A A L+ G +A +IK G +SD + N+L+ MY+ CG+I+ + F
Sbjct: 116 TYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESM 175
Query: 354 SQPDIVSWNTII--------AAFAQHVL-----------------YYKARSY------FD 382
++VSWN+++ A AQ V Y KA Y F+
Sbjct: 176 QGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFE 235
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M AVG + + +T +S+LS C G + + + ++ D +P LVD+ ++
Sbjct: 236 KMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYII-DNLLPMTMVLQTSLVDMYAKC 294
Query: 443 GQLQRACEIIR 453
G ++ A + R
Sbjct: 295 GAIEEALFVFR 305
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 140/316 (44%), Gaps = 28/316 (8%)
Query: 6 IVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT 65
+V + + + + H ++ H S D + N I ++ GNI A +VF+ M
Sbjct: 120 LVKASARLSKQKSGVSVHAQIIKTGHES--DRFIQNSLIHMYASCGNIMWAHKVFESMQG 177
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
K++V+WNSML Y G ++ +F++M ++V SW++ + G V+ EA F M
Sbjct: 178 KNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKM 237
Query: 126 ----PERNAASYNAMIS-----GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE 176
P+ N + +++S G ++ GR+ + +P V+ T ++D Y K
Sbjct: 238 RAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQ-TSLVDMYAKC-- 294
Query: 177 GGGIARARALFDAMPRRNE--VSWTVMINGLVENGLYEEAWELFGRMPQKNV----VAST 230
G I A +F + + W MI GL +GL EE+ +LF M + +
Sbjct: 295 -GAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYL 353
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRT 286
++ G V EAW F+ + R + + M+ A+ G+ A Q+
Sbjct: 354 CLLAACAHGGLVKEAWNFFESLVKRGMTPTSEHYACMVDVLARAGQLTTAYQFICQI--- 410
Query: 287 GMQPDDLIFVSLFTAC 302
++P + ++F+ C
Sbjct: 411 PIEPTASMLGAIFSGC 426
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 216/464 (46%), Gaps = 60/464 (12%)
Query: 43 NIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSW 102
N+ R G A + + N+++ Y ++ ++F MP K+ VSW
Sbjct: 349 NLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSW 408
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAASYN-AMIS--------GFIKFGRLCDAQRLF 153
N+M++G N+ +EA + F M N ++IS G++ GR + F
Sbjct: 409 NSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEG-F 467
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE- 212
K +V ++ Y E I + +F MP ++VSW I L + YE
Sbjct: 468 KWGLDLDVSVSNALLTLYA---ETDSINECQKVFFQMPEYDQVSWNSFIGALAK---YEA 521
Query: 213 ---EAWELFGRMPQK----------NVVAS-----------------------------T 230
+A + F M Q N++A+
Sbjct: 522 SVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIEN 581
Query: 231 AMITGFCKQGKVDEAWTLFQQI-RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
A++ + K ++++ +F ++ RD SWN MI+GY +G +A++L M++ G +
Sbjct: 582 ALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQK 641
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
D F ++ +ACAS+A L++G + +A ++ +SD+ V +ALV MY+KCG I +
Sbjct: 642 LDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRF 701
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
F +I SWN++I+ +A+H KA F +M G PD +TF+ +LS C G +
Sbjct: 702 FELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLV 761
Query: 410 DESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
DE F M YG+ PR EH++C+VD++ RAG +++ + I+
Sbjct: 762 DEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIK 805
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 195/391 (49%), Gaps = 25/391 (6%)
Query: 36 DVYRANLNIAAFSR-AGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
D+ +N+ ++ +S +G+I A +VFD++ ++ VTWNS+++ Y G + LF M
Sbjct: 160 DMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVM 219
Query: 95 PMKNV---------VSWNAMVAGCVQND----MLDEAFNYFAAMP-ERNAASYNAMISGF 140
M+ V + + A C D +L++ R+ +A+++GF
Sbjct: 220 QMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGF 279
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
++G + A+ +FK+M N V+ ++ G + +G A+ + N S V
Sbjct: 280 ARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVV 339
Query: 201 MINGLVE---------NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQ 251
+++ E G A+ + + A++ + K +D A ++FQ
Sbjct: 340 LLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQL 399
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+ +D SWN MI+G N R EEA++ F M R GM P + +S ++C+SL L G
Sbjct: 400 MPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG 459
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
RQ + K G D D+SV+NAL+T+Y++ SI + + F Q + D VSWN+ I A A++
Sbjct: 460 RQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKY 519
Query: 372 -VLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+A YF +M+ G RP+ +TF+++L+
Sbjct: 520 EASVLQALKYFLEMMQAGWRPNRVTFINILA 550
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 198/472 (41%), Gaps = 88/472 (18%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+Y + + F+R G + A+ +F +M ++ VT N ++ QH
Sbjct: 268 DLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLAR----QH--------- 314
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
Q + + F + E N+ S ++S F +F L + +R +E
Sbjct: 315 ---------------QGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQE 359
Query: 156 MPCPNVVSYTVMIDGYVKVKEG--------GGIARARALFDAMPRRNEVSWTVMINGLVE 207
+ + + ++D + + I A ++F MP ++ VSW MI+GL
Sbjct: 360 VHA--YLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDH 417
Query: 208 NGLYEEAWELFGRMPQKNVV---------------------------------------A 228
N +EEA F M + +V
Sbjct: 418 NERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSV 477
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQ-NGRGEEALNLFSQMVRTG 287
S A++T + + ++E +F Q+ D SWN I A+ +AL F +M++ G
Sbjct: 478 SNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAG 537
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
+P+ + F+++ A +S ++L G Q +AL++K+ D ++ NAL+ Y KC + D E
Sbjct: 538 WRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCE 597
Query: 348 LAFGQTSQ-PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
+ F + S+ D VSWN++I+ + + +KA M+ G + DG TF ++LS C
Sbjct: 598 IIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASV 657
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEH----YACLVDVMSRAGQLQRACEIIRL 454
++ M VH + E + LVD+ ++ G++ A L
Sbjct: 658 ATLERGME-----VHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFEL 704
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 200/425 (47%), Gaps = 34/425 (8%)
Query: 13 PTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWN 72
T SS H L K + DV+ N I + R GN+ +AR++FD+MP K++V+W+
Sbjct: 34 KTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWS 93
Query: 73 SMLTAYWHSGFPQHSRALFDAMP----MKNVVSWNAMVAGCVQNDMLD-----EAFNYFA 123
+++ Y + P + +LF + + N + + + C Q + +
Sbjct: 94 CLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFIC 153
Query: 124 AMP-ERNAASYNAMISGFIKF-GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
+P + N ++S + G + DA R+F E+ N V++ +I Y + G
Sbjct: 154 KLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCR---RGDAV 210
Query: 182 RARALFDAMP--------RRNEVSWTVMING---LVENGLYEEAWELFGRMPQ----KNV 226
A LF M R NE + ++ L + GL ++ R+ + +++
Sbjct: 211 SAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLE-QMLTRIEKSGFLRDL 269
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR- 285
+A++ GF + G +D A +F+Q+ R+ + N ++ G A+ +GEEA +F +M
Sbjct: 270 YVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL 329
Query: 286 TGMQPDDL-IFVSLFTACASLAL-LDQGRQTYALVIKHGF-DSDLSVNNALVTMYSKCGS 342
+ + L + +S FT ++L +G++ +A + + G D+ +S+ NALV MY KC +
Sbjct: 330 VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTA 389
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
I ++ F D VSWN++I+ + + +A S F M G+ P + +S LS
Sbjct: 390 IDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSS 449
Query: 403 CCRAG 407
C G
Sbjct: 450 CSSLG 454
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV + + +++ G I A + F+ MP +++ +WNSM++ Y G Q + +F M
Sbjct: 678 DVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMK 737
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS-----YNAMISGFIKFGRL 146
+ V++ +++ C ++DE + +F +M E S ++ M+ + G +
Sbjct: 738 QHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDV 797
Query: 147 CDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGG---GIARARALFDAMPRRNEVSWTVMI 202
+ K MP PN++ + ++ + G A+ L + P +N V++ ++
Sbjct: 798 KKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEP-QNAVNYVLLS 856
Query: 203 NGLVENGLYEEAWE 216
N G +E+ E
Sbjct: 857 NMHAAGGNWEDVVE 870
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 136/357 (38%), Gaps = 97/357 (27%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNS---------------------M 74
DV +N + ++ +I ++VF +MP D V+WNS M
Sbjct: 474 DVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEM 533
Query: 75 LTAYWHS--------------------GFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDM 114
+ A W G H+ L ++ N + NA++A + +
Sbjct: 534 MQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIE-NALLAFYGKCEQ 592
Query: 115 LDEAFNYFAAMPE-RNAASYNAMISGFIKFGRLCDA------------------------ 149
+++ F+ M E R+ S+N+MISG++ G L A
Sbjct: 593 MEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLS 652
Query: 150 --------QRLFKEMPC-------PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN 194
+R + C +VV + ++D Y K G I A F+ MP RN
Sbjct: 653 ACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKC---GKIDYASRFFELMPVRN 709
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQ 250
SW MI+G +G ++A ++F RM Q + V +++ G VDE + F+
Sbjct: 710 IYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFK 769
Query: 251 QI-----RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ I ++ M+ + G ++ + M M P+ LI+ ++ AC
Sbjct: 770 SMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTM---PMDPNILIWRTVLGAC 823
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 156/312 (50%), Gaps = 37/312 (11%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM---------------- 221
G A +FD MP R+ VSWT +I+G ++ GL+ +A LF RM
Sbjct: 158 GDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRMDVAPNAATFVSILGAC 217
Query: 222 -------------------PQ-KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
P K +V S ++ + K V +A LF +I +DI SW
Sbjct: 218 GKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWT 277
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
MI+G Q +E+L+LF +M+ +G +PD +I S+ +ACASL LLD GR + +
Sbjct: 278 SMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHS 337
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
D+ + +L+ MY+KCG I ++ F +I +WN I A + +A F
Sbjct: 338 RIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQF 397
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH-DYGIPPRSEHYACLVDVMS 440
++ G RP+ ITFL++ S CC +G +DE + F M Y + P EHY C+VD++
Sbjct: 398 GYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLC 457
Query: 441 RAGQLQRACEII 452
RA ++ A E+I
Sbjct: 458 RAELVEEAMELI 469
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 150/291 (51%), Gaps = 12/291 (4%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ N + +S G+ A +VFD MP +DVV+W +++ Y +G + ALF M
Sbjct: 143 DMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRMD 202
Query: 96 M-KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCDAQ 150
+ N ++ +++ C + L+ + + + N ++ ++K + DA+
Sbjct: 203 VAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAK 262
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVK-EGGGIARARALFDAMPRRNEVSWTVMIN-----G 204
RLF E+P ++VS+T MI G V+ + + + + + V T +++ G
Sbjct: 263 RLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLG 322
Query: 205 LVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
L++ G + + R+ + +V T++I + K G ++ A +F + ++I +WN I
Sbjct: 323 LLDYGRWVHEYIDHSRI-KWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYI 381
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
G A NG G+EAL F +V +G +P+++ F+++F+AC L+D+GR +
Sbjct: 382 GGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYF 432
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 120/258 (46%), Gaps = 26/258 (10%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
K++V N+++ Y ++ LFD +P K++VSW +M++G VQ E+ + F M
Sbjct: 240 KELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEM 299
Query: 126 P----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV-----MIDGYVKVKE 176
E + +++S G L D R E + + + V +ID Y K
Sbjct: 300 LGSGFEPDGVILTSVLSACASLG-LLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKC-- 356
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAM 232
G I A+ +F+ +P +N +W I GL NG +EA + FG + + N + A+
Sbjct: 357 -GCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAV 415
Query: 233 ITGFCKQGKVDEAWTLFQQIRC--RDIASW----NIMITGYAQNGRGEEALNLFSQMVRT 286
+ C G VDE + F+Q+ +++ W M+ + EEA+ L ++M
Sbjct: 416 FSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKM--- 472
Query: 287 GMQPDDLIFVSLFTACAS 304
M PD I +L +A ++
Sbjct: 473 PMPPDVQIIGALLSASST 490
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 3/159 (1%)
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
N++I+GY A+ ++ +V G PD ++ +CA + + + +Q + L +K
Sbjct: 78 NLIISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVK 137
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
D+ V N+ V +YS CG V + F D+VSW +I+ + + L+ A +
Sbjct: 138 TDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVAL 197
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
F +M V P+ TF+S+L C + G ++ + L+
Sbjct: 198 FLRM---DVAPNAATFVSILGACGKLGCLNLGKGIHGLV 233
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF--- 91
+DV+ I +++ G I A+Q+F+ +P+K++ TWN+ + +G Q + F
Sbjct: 341 WDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQFGYL 400
Query: 92 -DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM--PERNAAS----YNAMISGFIKFG 144
++ N +++ A+ + C + ++DE +YF M P N + Y M+ +
Sbjct: 401 VESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAE 460
Query: 145 RLCDAQRLFKEMPCP 159
+ +A L +MP P
Sbjct: 461 LVEEAMELINKMPMP 475
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 194/434 (44%), Gaps = 61/434 (14%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
+S+L Y G+ +R LFD KNV+SWN+M+ G ++ AF M +
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV 396
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV--------------MIDGYVKVKEG 177
N + + +C+ + F ++ + Y + + GY K
Sbjct: 397 KVNEVT--LLNVLPVCEEEIQFLKLK--EIHGYALRHGFIQSDELVANAFVAGYAKC--- 449
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------GRMPQKNVVAS-- 229
G + A +F M + SW +I G V+NG +A +L+ G P +AS
Sbjct: 450 GSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLL 509
Query: 230 -------------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
++++ + + GK+ A F + +++
Sbjct: 510 SACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLV 569
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
WN MI G++QN +AL++F QM+ + + PD++ + AC+ ++ L G++ +
Sbjct: 570 CWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFA 629
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+K V +L+ MY+KCG + S+ F + V+WN +I + H KA
Sbjct: 630 VKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAI 689
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F M G RPD +TF++LL+ C AG + E + M +GI P+ EHYAC+VD+
Sbjct: 690 ELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDM 749
Query: 439 MSRAGQLQRACEII 452
+ RAG+L A E++
Sbjct: 750 LGRAGRLNEALELV 763
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 222/436 (50%), Gaps = 25/436 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF---- 91
DV+ N IA + + G + +A +VFDKMP +++V+WNS++ A +G + S LF
Sbjct: 230 DVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLL 289
Query: 92 --DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY----NAMISGFIKFGR 145
D M +V + ++ C + + + + ++++ + K G
Sbjct: 290 NGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGY 349
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGG---IARARALFDAMPRRNEVSWTVMI 202
LC+A+ LF NV+S+ MI GY K ++ G + R + D + + NEV+ ++
Sbjct: 350 LCEARVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV-KVNEVTLLNVL 407
Query: 203 NGLVENGLYEEAWELFGR-----MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
E + + E+ G Q + + + A + G+ K G + A +F + + +
Sbjct: 408 PVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMV 467
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+SWN +I G+ QNG +AL+L+ M +G++PD SL +ACA L L G++ +
Sbjct: 468 SSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGS 527
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
++++GF+ D + +LV++Y +CG I+ ++L F + ++V WNT+I F+Q+ + A
Sbjct: 528 MLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDA 587
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCR--AGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
F QM++ + PD I+ + L C + A ++ + ++ F + H + S L
Sbjct: 588 LDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSH---LTEHSFVTCSL 644
Query: 436 VDVMSRAGQLQRACEI 451
+D+ ++ G ++++ I
Sbjct: 645 IDMYAKCGCMEQSQNI 660
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 152/364 (41%), Gaps = 81/364 (22%)
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM-------------PC---PNVVSYT 165
F A +N +NA++SG+++ DA +F EM PC V Y
Sbjct: 152 FNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYD 211
Query: 166 V----MIDGY-VKVK----------------EGGGIARARALFDAMPRRNEVSWTVMING 204
V + G+ +K K + G + A +FD MP+RN VSW ++
Sbjct: 212 VRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYA 271
Query: 205 LVENGLYEEAWELF--------GRMPQKNVVAST-------------------AMITGFC 237
+ENG++EE++ LF G MP + + A+ G C
Sbjct: 272 CLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLC 331
Query: 238 KQGKVD--------------EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
+ KV+ EA LF +++ SWN MI GY+++ A L +M
Sbjct: 332 GELKVNSSLLDMYSKCGYLCEARVLFDTNE-KNVISWNSMIGGYSKDRDFRGAFELLRKM 390
Query: 284 -VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF-DSDLSVNNALVTMYSKCG 341
+ ++ +++ +++ C + ++ + ++HGF SD V NA V Y+KCG
Sbjct: 391 QMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCG 450
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
S+ +E F + SWN +I Q+ KA + M G+ PD T SLLS
Sbjct: 451 SLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLS 510
Query: 402 VCCR 405
C R
Sbjct: 511 ACAR 514
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 116/229 (50%), Gaps = 4/229 (1%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
Q +VV T ++T + ++ +F R +++ WN +++GY +N +A+ +F +
Sbjct: 126 QNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVE 185
Query: 283 MVR-TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
M+ T PD+ + AC + + G + +K SD+ V NAL+ MY K G
Sbjct: 186 MISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFG 245
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA--VGVRPDGITFLSL 399
+ + F + Q ++VSWN+++ A ++ ++ ++ F ++ G+ PD T +++
Sbjct: 246 FVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTV 305
Query: 400 LSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ +C R G++ M +F+ + G+ + + L+D+ S+ G L A
Sbjct: 306 IPLCARQGEVRLGM-VFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEA 353
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 132/302 (43%), Gaps = 27/302 (8%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
++A +R +++ +++ M D S+++ Y G ++ FD M KN+
Sbjct: 509 LSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNL 568
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
V WN M+ G QN+ +A + F M I G + A RL KE+ C
Sbjct: 569 VCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCF 628
Query: 160 NVVSYTV--------MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
V S+ +ID Y K G + +++ +FD + + EV+W V+I G +G
Sbjct: 629 AVKSHLTEHSFVTCSLIDMYAKC---GCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHG 685
Query: 212 EEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNI 262
+A ELF M + + V A++T G V E Q++ + +
Sbjct: 686 RKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYAC 745
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
++ + GR EAL L +++ +PD I+ SL ++C + LD G + +++ G
Sbjct: 746 VVDMLGRAGRLNEALELVNELPD---KPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELG 802
Query: 323 FD 324
D
Sbjct: 803 PD 804
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV-IKHGFDSDLSVNNALVTM 336
NL + + +P LI + L C ++ GR+ + + F +D+ + LVTM
Sbjct: 80 NLNDVVSSSNSKPKQLIGL-LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTM 138
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG-VRPDGIT 395
YS C S DS L F + + ++ WN +++ + ++ L+ A F +MI++ PD T
Sbjct: 139 YSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFT 198
Query: 396 FLSLLSVC 403
++ C
Sbjct: 199 LPCVIKAC 206
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 200/444 (45%), Gaps = 56/444 (12%)
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
K D S++ AY G + +R +FD +P ++VVSW +M+ VQN+ +E
Sbjct: 163 KSNAADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLML 222
Query: 122 FAAMPER----NAASYNAMISGFIKFGRLCDAQ----RLFKEMPCPNVVSYTVMIDGYVK 173
F M E N + ++++ K G L + + K N T +++ YVK
Sbjct: 223 FNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVK 282
Query: 174 VKEGGGIARARALFDAMPRR------NEVSWTVMINGLVENGLYEEAWELFGR------M 221
G I AR++FD + V WT MI G + G + A ELF +
Sbjct: 283 C---GDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRIL 339
Query: 222 PQKNVVAS--------------------------------TAMITGFCKQGKVDEAWTLF 249
P +AS +++ + K G + +A +F
Sbjct: 340 PNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIPDAHYVF 399
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
+D+ SWN +I+GYAQ+G EAL+LF++M PD + V + +ACAS+
Sbjct: 400 ATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQ 459
Query: 310 QGRQTYALVIKHGF-DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
G + +K+G S + V AL+ Y+KCG + + F + + V+W +I
Sbjct: 460 IGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGC 519
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
+ + F M+ + P+ + F +LL+ C +G ++E + +F+ M + P
Sbjct: 520 GMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPS 579
Query: 429 SEHYACLVDVMSRAGQLQRACEII 452
+HYAC+VD+++RAG LQ A + I
Sbjct: 580 MKHYACMVDLLARAGNLQEALDFI 603
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 185/414 (44%), Gaps = 64/414 (15%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
++++ Y GF +H+R LF +P S+ ++ ND+ +++ +
Sbjct: 72 TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVSFYN-LARTTLG 130
Query: 132 SYNAMI--SGFIKFGRLCDAQRLFKEMPCPNVVS-------YTVMIDGYVKVKEGGGIAR 182
S+N ++ S +K L ++ C + S T ++D Y K G +
Sbjct: 131 SFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNAADSFVLTSLVDAYSKC---GKLRD 187
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------------ 224
AR +FD +P R+ VSWT MI V+N EE LF RM +
Sbjct: 188 ARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTK 247
Query: 225 ---------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCR------DI 257
N +T+++ + K G + +A ++F + D+
Sbjct: 248 LGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDL 307
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
W MI GY Q G + AL LF+ + P+ + SL +ACA L + G+ + L
Sbjct: 308 VFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVL 367
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
V+K+G D D S+ N+LV MY+KCG I D+ F T D+VSWN++I+ +AQ Y+A
Sbjct: 368 VVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEA 426
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAG--KIDESMNLFNLMVHDYGIPPRS 429
F++M PD +T + +LS C G +I S++ F L YG+ S
Sbjct: 427 LDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLHGFAL---KYGLVSSS 477
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 138/305 (45%), Gaps = 25/305 (8%)
Query: 38 YRANLNIAAFSRAGNITAARQVFDKMPTK------DVVTWNSMLTAYWHSGFPQHSRALF 91
Y A + + + G+I AR VFD+ D+V W +M+ Y G+PQ + LF
Sbjct: 271 YLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELF 330
Query: 92 DAMP----MKNVVSWNAMVAGCVQ--NDMLDEAFNYFAAMPERNAASY-NAMISGFIKFG 144
+ N V+ ++++ C Q N ++ + + + S N+++ + K G
Sbjct: 331 TDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDTSLRNSLVDMYAKCG 390
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMING 204
+ DA +F +VVS+ +I GY + G A LF+ M + + V + G
Sbjct: 391 LIPDAHYVFATTVDKDVVSWNSVISGYA---QSGSAYEALDLFNRMRMESFLPDAVTVVG 447
Query: 205 LVEN----GLYEEAWELFGRMPQKNVVAS-----TAMITGFCKQGKVDEAWTLFQQIRCR 255
++ G ++ L G + +V+S TA++ + K G A +F + +
Sbjct: 448 VLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEK 507
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
+ +W MI G G G +L LF M++ + P++++F +L AC+ ++++G +
Sbjct: 508 NAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIF 567
Query: 316 ALVIK 320
+ K
Sbjct: 568 DFMCK 572
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 117/288 (40%), Gaps = 41/288 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D N + +++ G I A VF KDVV+WNS+++ Y SG + LF+ M
Sbjct: 375 DTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMR 434
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF-IKFGRLCDAQRLFK 154
M++ + V G + +A A + GF +K+G
Sbjct: 435 MESFLPDAVTVVGVL------------SACASVGAHQIGLSLHGFALKYG---------- 472
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEA 214
+ ++ T +++ Y K G AR +FD M +N V+W MI G G +
Sbjct: 473 -LVSSSIYVGTALLNFYAKC---GDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGS 528
Query: 215 WELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTLFQQIRCRDI------ASWNIMI 264
LF M ++ +V + T ++ G V+E +F C+++ + M+
Sbjct: 529 LALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIF-DFMCKELNFVPSMKHYACMV 587
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
A+ G +EAL+ +M +QP +F + C + D G
Sbjct: 588 DLLARAGNLQEALDFIDKM---PVQPGVGVFGAFLHGCGLHSNFDFGE 632
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 10/147 (6%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +Y + +++ G+ T+AR VFD M K+ VTW +M+ G S ALF
Sbjct: 475 SSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRD 534
Query: 94 M----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFG 144
M + N V + ++A C + M++E F M + + Y M+ + G
Sbjct: 535 MLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAG 594
Query: 145 RLCDAQRLFKEMPC-PNVVSYTVMIDG 170
L +A +MP P V + + G
Sbjct: 595 NLQEALDFIDKMPVQPGVGVFGAFLHG 621
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 202/461 (43%), Gaps = 71/461 (15%)
Query: 59 VFDKMPT--KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLD 116
+ +K P D+ N++L Y G ++R LFD MP +N VSW +V+G Q ++
Sbjct: 104 ILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIR 163
Query: 117 EAFNYFAAMP---ERNAASYNAMISGF----IKFGRLCDAQRLFKEMPCPNVVSYTVMID 169
E F F+ M N ++ +++ +K+G A L + V+ +I
Sbjct: 164 ECFALFSGMLACFRPNEFAFASVLCACEEQDVKYGLQVHAAALKMSLDFSVYVA-NALIT 222
Query: 170 GYVKVKEGGG------IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM-- 221
Y K G G A +F +M RN +SW MI+G GL ++A LF M
Sbjct: 223 MYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYC 282
Query: 222 -------------------------------------------PQKNVVASTAMITGFCK 238
+ +++ ++T K
Sbjct: 283 NGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVK 342
Query: 239 Q-----GKVDEAWTLFQQIRC-RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
G + + + LF DI SW +I+ +A+ E+A LF Q+ R D
Sbjct: 343 SYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERDP-EQAFLLFCQLHRENFVLDR 401
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
F ACA + ++ V+K GF +D V+NAL+ Y + GS+ SE F +
Sbjct: 402 HTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTE 461
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
D+VSWN+++ ++A H A F QM V PD TF++LL+ C AG ++E
Sbjct: 462 MGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVALLAACSHAGLVEEG 518
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+FN M +GI P +HY+C+VD+ RAG++ A E+IR
Sbjct: 519 TQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIR 559
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 164/376 (43%), Gaps = 46/376 (12%)
Query: 35 YDVYRANLNIAAFSRAG---------NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
+ VY AN I +S+ A VF M +++++WNSM++ + G
Sbjct: 212 FSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRGLGD 271
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQN--------------DMLDEAFNYFAAMPERNAA 131
+ LF M + + + G + + L F +
Sbjct: 272 KAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLI 331
Query: 132 SYNAMISGFIKF-----GRLCDAQRLFKEMPCP-NVVSYTVMIDGYVKVKEGGGIARARA 185
S +++ +K G + D +LF + ++VS+T +I + + +A
Sbjct: 332 SEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAERDP----EQAFL 387
Query: 186 LFDAMPRRNEV----SWTVMING----LVENGLYEEAWELFGRMPQKNVVASTAMITGFC 237
LF + R N V ++++ + + E E ++ + + V S A+I +
Sbjct: 388 LFCQLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYG 447
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
+ G + + +F ++ C D+ SWN M+ YA +GR ++AL+LF QM + PD FV+
Sbjct: 448 RSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVA 504
Query: 298 LFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQ 355
L AC+ L+++G Q + ++ HG L + +V +Y + G I ++ EL +
Sbjct: 505 LLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMK 564
Query: 356 PDIVSWNTIIAAFAQH 371
PD V W++++ + +H
Sbjct: 565 PDSVIWSSLLGSCRKH 580
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D +N I A+ R+G++ + QVF +M D+V+WNSML +Y G + + LF M
Sbjct: 435 DTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKDALDLFKQMD 494
Query: 96 MK-NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS-----YNAMISGFIKFGRLCDA 149
+ + ++ A++A C +++E F +M E + + Y+ M+ + + G++ +A
Sbjct: 495 VHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEA 554
Query: 150 QRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
+ L ++MP P+ V ++ ++ K E A F + +N +++ M N
Sbjct: 555 EELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNIYSSG 614
Query: 209 GLYEEA 214
G + EA
Sbjct: 615 GSFIEA 620
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/428 (28%), Positives = 208/428 (48%), Gaps = 28/428 (6%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
++ + + G A Q F ++ KD+++W SM+ Y G F M ++N V +
Sbjct: 257 LSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEM-LENQVCPD 315
Query: 104 AMVAGCVQNDMLDEAFNY----FAAMPER-----NAASYNAMISGFIKFGRLCDAQRLFK 154
MV GC+ + + Y F + R + N+++S + KFG L A+RLF+
Sbjct: 316 GMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQ 375
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV-MINGLVENGLYEE 213
++ + MI GY ++ G + LF M S +V +++ + G E
Sbjct: 376 RSQ-GSIEYWNFMIVGYGRI---GKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGE 431
Query: 214 AWELFGRMPQKNVV---------ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
GR NV+ + ++I + K K++ +W +F + RD+ WN +I
Sbjct: 432 I--NLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNRSE-RDVILWNALI 488
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
+ + EEA++LF M+ P+ V + +AC+ LA L++G + + + + GF
Sbjct: 489 SAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFK 548
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+L + ALV MY+KCG + S F + D++ WN +I+ + + A F+ M
Sbjct: 549 LNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLM 608
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
V+P+ ITFLSLLS C AG ++E N+F M Y + P +HY C+VD++ R+
Sbjct: 609 EESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKHYTCMVDLLGRSCN 667
Query: 445 LQRACEII 452
L+ A E++
Sbjct: 668 LEEAEELV 675
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 183/414 (44%), Gaps = 60/414 (14%)
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGR 145
+FD +P+++VV+W A+V G VQN + + M + + + GF+ G
Sbjct: 168 VFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGN 227
Query: 146 LCD--------------------------------------AQRLFKEMPCPNVVSYTVM 167
L D A + F E+ +++S+T M
Sbjct: 228 LGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSM 287
Query: 168 IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG-------- 219
I Y + G ++ F M N+V M+ G + +G + + +++G
Sbjct: 288 IRVYARF---GMMSDCVRFFWEM-LENQVCPDGMVIGCILSG-FGNSVDVYGGKAFHGLI 342
Query: 220 --RMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
R + + ++++ +CK G + A LFQ+ + I WN MI GY + G+ + +
Sbjct: 343 IRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQRSQ-GSIEYWNFMIVGYGRIGKNVKCI 401
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
LF +M G++ + + VS +C L ++ GR + VIK D +SV N+L+ MY
Sbjct: 402 QLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMY 461
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
KC + S F + S+ D++ WN +I+A Y +A S FD MI P+ T +
Sbjct: 462 GKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLV 520
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+LS C +++ L +++ G LVD+ ++ GQL+++ E+
Sbjct: 521 VVLSACSHLAFLEKGERLHRY-INEKGFKLNLPLGTALVDMYAKCGQLEKSREV 573
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 99/186 (53%), Gaps = 4/186 (2%)
Query: 219 GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
G P+ + V S+ ++ + + ++++A +F +I RD+ +W ++ GY QNG E L
Sbjct: 140 GFFPENSAVGSS-FVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLE 198
Query: 279 LFSQMVRTG---MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
S+M R G +P+ F AC +L L GR + LV+K+G L + +++++
Sbjct: 199 CISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLS 258
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
MY KCG ++ +F + D++SW ++I +A+ + +F +M+ V PDG+
Sbjct: 259 MYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMV 318
Query: 396 FLSLLS 401
+LS
Sbjct: 319 IGCILS 324
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 87/211 (41%), Gaps = 12/211 (5%)
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
TLF + +D WN + + L+ +S M + P+ F + ++ A
Sbjct: 65 TLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFM 124
Query: 307 LLDQGRQTYALVIKHG-FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
++ G +AL K G F + +V ++ V++YS+C + D+ F + D+V+W ++
Sbjct: 125 MIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALV 184
Query: 366 AAFAQHVLYYKARSYFDQMIAVG---VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
+ Q+ +M VG +P+ T C G + L L+V +
Sbjct: 185 IGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKN 244
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
GI CL+D+ S + C + R
Sbjct: 245 -GI-------GCLLDIQSSVLSMYCKCGVPR 267
>Medtr6g016020.1 | PPR containing plant-like protein | HC |
chr6:5715947-5718139 | 20130731
Length = 730
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 205/469 (43%), Gaps = 57/469 (12%)
Query: 33 SSYDVYRANLN--IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRAL 90
S +D Y +N I + R + +A ++F+++P ++VV+WN ++ + +G Q + +
Sbjct: 238 SGFDCYVNAVNSLIGVYVRCRALCSAERLFEQVPVQNVVSWNMIIDSMVKNGRSQMALEV 297
Query: 91 FDAMPMKNVVSWNAMVAG---------------CVQNDMLDEAFNYFAAMPERNAASYNA 135
+ M + +V A G CV ++ F E + A
Sbjct: 298 YLNMLRRGLVPSQATFVGVIESCIGLRNLSCGECVHAKVIRSGF-------ESDVVVGTA 350
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
++ + KF +L A F ++ NVVS+ ++ GY V I R +F + NE
Sbjct: 351 LVDFYAKFEKLISAHYCFDQIEEKNVVSWNALMLGYSNVCSSTSILLLREMFRSGCFPNE 410
Query: 196 VSWTVMI-----------NGLV--------------------ENGLYEEAWELFGRMPQK 224
S++ ++ +GLV NGL E
Sbjct: 411 FSFSAVLKSSSVLDLRQLHGLVIRMGYENHEYVLSSLVVAYERNGLINEVLSFVQEFNNP 470
Query: 225 NVVASTAMITG-FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
V + +I G + + G +E L D+ SWNI I+ A++ E LF +M
Sbjct: 471 LHVIPSNIIAGIYNRTGLYNETMKLLSLQERPDVVSWNIAISACARSNNYNEVFELFKRM 530
Query: 284 VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSI 343
+ PD FV+ AC + LD G + L++K D V N L+ MY KCG I
Sbjct: 531 HSAHVHPDKYTFVTGLCACTKICSLDLGSSFHGLIVKTN-SCDTFVGNVLIDMYGKCGKI 589
Query: 344 VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
S F + + ++++W +I+A + A F+ M+ +G +PD + ++LS C
Sbjct: 590 ESSVKVFEEITDRNVITWTALISALGLNSYARDAVKIFNNMVLIGFKPDTLALRAVLSSC 649
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
G + E M +F M YGI P +HY C++D++++ GQ++ A E++
Sbjct: 650 RYGGLVSEGMEIFKQMGTIYGIQPEHDHYHCIIDLLAKNGQIKEAEEVM 698
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 165/382 (43%), Gaps = 76/382 (19%)
Query: 94 MPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
+P +++ N ++ + + A F MP+R SYNA+I + + G + +A RL
Sbjct: 37 IPNQSIFINNNIITSYISYNNFILARKLFDVMPQRTLVSYNALIKAYSRSGDVNEAWRLV 96
Query: 154 KE-MPC---PNVVSYTVMI--------DGY----VKVKEG-------------------G 178
E M C PN + T ++ GY + VK G G
Sbjct: 97 NELMVCGFGPNQYTLTGLLCCEGLKLFQGYQLFGLSVKNGVFDVDAFVGSALLGFFGRCG 156
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS----TAMIT 234
+ A ++FD M ++ V+W M++ L NG E+ LF + + V S A+++
Sbjct: 157 CLDEAFSVFDDMKCKSLVTWNTMLSLLSCNGFVEDVKVLFCELLRLGVFLSEGSFVAVLS 216
Query: 235 GF-----------------------CKQGKVDE-------------AWTLFQQIRCRDIA 258
G C V+ A LF+Q+ +++
Sbjct: 217 GIGGCEEDLSYGEQVHCLMTKSGFDCYVNAVNSLIGVYVRCRALCSAERLFEQVPVQNVV 276
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SWN++I +NGR + AL ++ M+R G+ P FV + +C L L G +A V
Sbjct: 277 SWNMIIDSMVKNGRSQMALEVYLNMLRRGLVPSQATFVGVIESCIGLRNLSCGECVHAKV 336
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
I+ GF+SD+ V ALV Y+K ++ + F Q + ++VSWN ++ ++ +V +
Sbjct: 337 IRSGFESDVVVGTALVDFYAKFEKLISAHYCFDQIEEKNVVSWNALMLGYS-NVCSSTSI 395
Query: 379 SYFDQMIAVGVRPDGITFLSLL 400
+M G P+ +F ++L
Sbjct: 396 LLLREMFRSGCFPNEFSFSAVL 417
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 144/291 (49%), Gaps = 19/291 (6%)
Query: 125 MPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
+P ++ N +I+ +I + A++LF MP +VSY +I Y + G + A
Sbjct: 37 IPNQSIFINNNIITSYISYNNFILARKLFDVMPQRTLVSYNALIKAYSR---SGDVNEAW 93
Query: 185 ALFDAM------PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV-----ASTAMI 233
L + + P + ++ + GL L++ ++LFG + V +A++
Sbjct: 94 RLVNELMVCGFGPNQYTLTGLLCCEGL---KLFQ-GYQLFGLSVKNGVFDVDAFVGSALL 149
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
F + G +DEA+++F ++C+ + +WN M++ + NG E+ LF +++R G+ +
Sbjct: 150 GFFGRCGCLDEAFSVFDDMKCKSLVTWNTMLSLLSCNGFVEDVKVLFCELLRLGVFLSEG 209
Query: 294 IFVSLFTACASLAL-LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
FV++ + L G Q + L+ K GFD ++ N+L+ +Y +C ++ +E F Q
Sbjct: 210 SFVAVLSGIGGCEEDLSYGEQVHCLMTKSGFDCYVNAVNSLIGVYVRCRALCSAERLFEQ 269
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
++VSWN II + ++ A + M+ G+ P TF+ ++ C
Sbjct: 270 VPVQNVVSWNMIIDSMVKNGRSQMALEVYLNMLRRGLVPSQATFVGVIESC 320
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/480 (27%), Positives = 220/480 (45%), Gaps = 82/480 (17%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H + H + + +N + +S+ + +A+ V + VVTW S+++ H
Sbjct: 29 HAH---IIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVH 85
Query: 81 S-----------------------GFPQHSRA-LFDAMPM----------KNVVSWNAMV 106
+ FP +A F +PM K + ++ V
Sbjct: 86 NRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFV 145
Query: 107 AGCVQNDML------DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC-- 158
GC DM +A N F MP+RN A++NA IS ++ R DA FKE C
Sbjct: 146 -GCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVH 204
Query: 159 --PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
PN +++ ++ V M R N ++ + Y+E
Sbjct: 205 GEPNSITFCAFLNACVD----------------MVRLN---LGRQLHAFIVRCGYKE--- 242
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-DIASWNIMITGYAQNGRGEE 275
+V + +I + K G + A +F +I R ++ SW M+ QN E
Sbjct: 243 --------DVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEER 294
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
A +F Q R ++P D + S+ +ACA L L+ GR +AL +K + ++ V +ALV
Sbjct: 295 ACMVFLQ-ARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVD 353
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI--AVGVRPDG 393
MY KCGSI ++E F + + ++V+WN +I +A A F++M + G+RP
Sbjct: 354 MYGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSY 413
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+T +S+LSVC R G ++ + +F M +YGI P +EH+AC+VD++ R+G + RA E I+
Sbjct: 414 VTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQ 473
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 157/365 (43%), Gaps = 39/365 (10%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
YDV+ + + G A +FD+MP +++ TWN+ + S Q R+L +
Sbjct: 141 YDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLATWNAYI-----SNAVQDRRSLDAIV 195
Query: 95 PMK---------NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFI 141
K N +++ A + CV L+ A + + + + N +I +
Sbjct: 196 AFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYG 255
Query: 142 KFGRLCDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
K G + A+ +F + NVVS+ M+ V+ E RA + R EV T
Sbjct: 256 KCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHE-----EERACMVFLQARKEVEPTD 310
Query: 201 MINGLVENGLYEEAWELFGR---------MPQKNVVASTAMITGFCKQGKVDEAWTLFQQ 251
+ V + E GR + N+ +A++ + K G ++ A +F +
Sbjct: 311 FMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIENAEQVFSE 370
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMV--RTGMQPDDLIFVSLFTACASLALLD 309
+ R++ +WN MI GYA G + AL LF +M G++P + +S+ + C+ + ++
Sbjct: 371 LPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVE 430
Query: 310 QGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS--QPDIVSWNTIIA 366
+G Q + ++ + +G + +V + + G +VD F Q QP I W ++
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLGRSG-LVDRAYEFIQNMAIQPTISVWGALLG 489
Query: 367 AFAQH 371
A H
Sbjct: 490 ACRMH 494
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 53/308 (17%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPT-KDVVTWNSMLTAYWHSGFPQHSRALF--- 91
DV AN I + + G+I +A VF+++ K+VV+W SML A + + + +F
Sbjct: 243 DVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQA 302
Query: 92 --DAMP----MKNVVSWNAMVAG--------------CVQNDM---------------LD 116
+ P + +V+S A + G CV++++ ++
Sbjct: 303 RKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIE 362
Query: 117 EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN---VVSYTVMIDGYVK 173
A F+ +PERN ++NAMI G+ G + A RLF+EM + SY +I
Sbjct: 363 NAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISILSV 422
Query: 174 VKEGGGIARARALFDAMPRRNEVS-----WTVMINGLVENGLYEEAWELFGRMPQKNVVA 228
G + R +F++M + + +++ L +GL + A+E M + ++
Sbjct: 423 CSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQPTIS 482
Query: 229 STAMITGFCK-QGKVD----EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
+ G C+ GK + A LF ++ D + ++ A GR EEA + +M
Sbjct: 483 VWGALLGACRMHGKTELGKIAAEKLF-ELDHVDSGNHVVLSNMLASAGRWEEATVVRKEM 541
Query: 284 VRTGMQPD 291
G++ +
Sbjct: 542 KDIGIKKN 549
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 187/375 (49%), Gaps = 35/375 (9%)
Query: 80 HSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN--AASYNAMI 137
H G H R + A+ +NV + +V +D+A + F M +R+ A +N++I
Sbjct: 128 HHGIWLH-RLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLI 186
Query: 138 SGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS 197
SG+ + G DA L+ +M V +KV G G+ EV
Sbjct: 187 SGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVG---------EEVH 237
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
V+ G ++G A++ + K G + +A +F ++ RD
Sbjct: 238 RHVVRCGFWDDGF-----------------VLNALVDMYSKCGDIVKARKIFNKMHFRDS 280
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SWN M+TGY ++G EA+N+F QMV G +PD ++ T+ +SL D G Q +
Sbjct: 281 VSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISAILTSVSSL---DVGVQIHGW 337
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
VI+ G + +LS+ N+L+ YSK G + + F + D+VSWN+II++ +H +A
Sbjct: 338 VIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISSHCKHP---EA 394
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
SYF++M G PD ITF+SLLS C G +++ LF LM Y I P EHY C+V+
Sbjct: 395 ISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFALMCEKYKIKPIMEHYGCMVN 454
Query: 438 VMSRAGQLQRACEII 452
+ RAG +++A II
Sbjct: 455 LYGRAGLVEKAYSII 469
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 123/234 (52%), Gaps = 6/234 (2%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS--WNIMITGYAQNGRGEEALNLF 280
+NV S+ ++ + G +D+A LF Q+ RD+ + WN +I+GYA+ G ++A+ L+
Sbjct: 143 HRNVGISSKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALY 202
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
QMV G++PD F + C + L+ G + + V++ GF D V NALV MYSKC
Sbjct: 203 FQMVEEGVEPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKC 262
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
G IV + F + D VSWN+++ + +H L +A + F QM+ G +PD + S+
Sbjct: 263 GDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPD---YFSIS 319
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
++ +D + + ++ G+ L+ S+ G+L +A I L
Sbjct: 320 AILTSVSSLDVGVQIHGWVIRQ-GVEWNLSIANSLIIAYSKHGRLDKARSIFNL 372
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 183/421 (43%), Gaps = 81/421 (19%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS--WNAMVAGCVQNDMLDEAFNYFA 123
++V + ++ Y G+ + LFD M +++ + WN++++G + + D+A +
Sbjct: 144 RNVGISSKLVRLYASFGYMDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYF 203
Query: 124 AMPERNAASYNAMISGFIKFGRLCDAQRL--FKEMPCPNVVSYTVMIDGYV------KVK 175
M E I F + ++C L E +VV DG+V
Sbjct: 204 QMVEEGV---EPDIFTFPRVLKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYS 260
Query: 176 EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----------- 224
+ G I +AR +F+ M R+ VSW M+ G V +GL EA +F +M K
Sbjct: 261 KCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMVLKGEKPDYFSISA 320
Query: 225 -------------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
N+ + ++I + K G++D+A ++F + RD+ S
Sbjct: 321 ILTSVSSLDVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVS 380
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN +I+ + ++ EA++ F +M G PD + FVSL +ACA L L++ G + +AL+
Sbjct: 381 WNSIISSHCKH---PEAISYFEKMEEAGEVPDKITFVSLLSACAHLGLVNDGERLFALMC 437
Query: 320 -KHGFDSDLSVNNALVTMYSKCGSI---------VDSELAFGQTSQPDIVSWNTIIAAFA 369
K+ + +V +Y + G + +DSE A G T W ++ A
Sbjct: 438 EKYKIKPIMEHYGCMVNLYGRAGLVEKAYSIIVRMDSE-AVGPT------LWGALLYACL 490
Query: 370 QH----VLYYKARSYFDQMIAVGVRPDG-ITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
H + A F+ + PD F+ L+ + +AG++ E M +M+ D G
Sbjct: 491 LHGNVTIGEISANKLFE------LEPDNEHNFVLLMKIYEKAGRL-EDMERIRMMMVDRG 543
Query: 425 I 425
+
Sbjct: 544 L 544
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 135/302 (44%), Gaps = 17/302 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + N + +S+ G+I AR++F+KM +D V+WNSMLT Y G + +F M
Sbjct: 248 DGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGLEVEAINIFRQMV 307
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMP-ERNAASYNAMISGFIKFGRLCDAQ 150
+K + S +A++ D+ + + E N + N++I + K GRL A+
Sbjct: 308 LKGEKPDYFSISAILTSVSSLDVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKAR 367
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
+F MP +VVS+ +I + K E I+ + +A +++++ +++ GL
Sbjct: 368 SIFNLMPERDVVSWNSIISSHCKHPE--AISYFEKMEEAGEVPDKITFVSLLSACAHLGL 425
Query: 211 YEEAWELFGRMPQKNVVAST-----AMITGFCKQGKVDEAWTLFQQIRCRDIAS--WNIM 263
+ LF M +K + M+ + + G V++A+++ ++ + W +
Sbjct: 426 VNDGERLFALMCEKYKIKPIMEHYGCMVNLYGRAGLVEKAYSIIVRMDSEAVGPTLWGAL 485
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPD-DLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+ YA G + S ++PD + FV L L+ + +++ G
Sbjct: 486 L--YACLLHGNVTIGEISANKLFELEPDNEHNFVLLMKIYEKAGRLEDMERIRMMMVDRG 543
Query: 323 FD 324
D
Sbjct: 544 LD 545
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 193/387 (49%), Gaps = 15/387 (3%)
Query: 78 YWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI 137
++H +P + + + + S A+ + ++ A+ F MP N S+N +I
Sbjct: 43 HFHQIYPH---IIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTII 99
Query: 138 SGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEG--GGIARARALFDAMP 191
F + A LF +M P ++Y + Y ++ G R + +
Sbjct: 100 RAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGL- 158
Query: 192 RRNEVSWTVMINGLVENGLYEEAWELFG----RMPQKNVVASTAMITGFCKQGKVDEAWT 247
+ ++ +I GL EA +F + +VVA +MI G+ K G++DE+
Sbjct: 159 QNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRN 218
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
LF + R SWN MI+GY +NG+ EAL LF++M G + + VSL ACA L
Sbjct: 219 LFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGA 278
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
L G+ + + ++ F+ ++ V A++ MY KCGS+ ++ F + + WN+II
Sbjct: 279 LQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIG 338
Query: 368 FAQHVLYYKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
A + +A +F ++ + ++PD ++F+ +L+ C G I+++ + F LM++ Y I
Sbjct: 339 LAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIE 398
Query: 427 PRSEHYACLVDVMSRAGQLQRACEIIR 453
P +HY C+VDV+ +AG L+ A E+I+
Sbjct: 399 PSIKHYTCIVDVLGQAGLLEEAEELIK 425
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 177/382 (46%), Gaps = 65/382 (17%)
Query: 48 SRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWN 103
S +GNI A ++F +MP ++ +WN+++ A+ S PQ + +LF M + +++
Sbjct: 72 SPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYP 131
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPER--------NAASYNAMISGFIKFGRLCDAQRLFK- 154
++ Q L A +Y A + R + N +I + G + +A+R+F
Sbjct: 132 SVFKAYAQ---LGHA-HYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDG 187
Query: 155 ---EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
E+ +VV+ MI GY K G I +R LFD M R VSW MI+G V NG
Sbjct: 188 KKLELYDHDVVAINSMIMGYAKC---GEIDESRNLFDDMITRTSVSWNSMISGYVRNGKL 244
Query: 212 EEAWELFGRMP---------------------------------------QKNVVASTAM 232
EA ELF +M + NV+ TA+
Sbjct: 245 MEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAI 304
Query: 233 ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM-QPD 291
I +CK G V+ A +F+ R ++ WN +I G A NG EA FS++ + + +PD
Sbjct: 305 IDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPD 364
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVI-KHGFDSDLSVNNALVTMYSKCGSIVDSE-LA 349
+ F+ + TAC L +++ R + L++ K+ + + +V + + G + ++E L
Sbjct: 365 SVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELI 424
Query: 350 FGQTSQPDIVSWNTIIAAFAQH 371
G +PD + W +++++ +H
Sbjct: 425 KGMPLKPDAIIWGSLLSSCRKH 446
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 135/292 (46%), Gaps = 34/292 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFD----KMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
D + N I ++ G ++ AR+VFD ++ DVV NSM+ Y G SR LF
Sbjct: 161 DQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLF 220
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP-ERNAASYNAMIS--------GFIK 142
D M + VSWN+M++G V+N L EA F M E S M+S G ++
Sbjct: 221 DDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQ 280
Query: 143 FGRLCD--AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
G+ +R E+ NV+ T +ID Y K G + A +F+ PRR W
Sbjct: 281 HGKWVHDYIKRNHFEL---NVIVVTAIIDMYCKC---GSVENAVEVFETCPRRGLSCWNS 334
Query: 201 MINGLVENGLYEEAWELFGRMPQKNVVASTAM----ITGFCKQ-GKVDEAWTLFQQIRCR 255
+I GL NG EA+E F ++ ++ ++ + CK G +++A F+ + +
Sbjct: 335 IIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNK 394
Query: 256 -----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
I + ++ Q G EEA L M ++PD +I+ SL ++C
Sbjct: 395 YEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGM---PLKPDAIIWGSLLSSC 443
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 123/296 (41%), Gaps = 56/296 (18%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+DV N I +++ G I +R +FD M T+ V+WNSM++ Y +G + LF+ M
Sbjct: 195 HDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKM 254
Query: 95 PMK---------------------------------------NVVSWNAMVAGCVQNDML 115
++ NV+ A++ + +
Sbjct: 255 QVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSV 314
Query: 116 DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC-----PNVVSYTVMIDG 170
+ A F P R + +N++I G G +A F ++ P+ VS+ ++
Sbjct: 315 ENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTA 374
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVS-----WTVMINGLVENGLYEEAWELFGRMPQK- 224
K G I +AR F+ M + E+ +T +++ L + GL EEA EL MP K
Sbjct: 375 ---CKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKP 431
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQ---QIRCRDIASWNIMITGYAQNGRGEEAL 277
+ + ++++ K V A Q ++ D + + +M +A + + EEA+
Sbjct: 432 DAIIWGSLLSSCRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAI 487
>Medtr3g088835.1 | PPR containing plant-like protein | HC |
chr3:40655233-40657665 | 20130731
Length = 629
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 217/480 (45%), Gaps = 56/480 (11%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H HFL + ++ Y N I ++ GNI A +VFD + K+ +WN L +
Sbjct: 38 HAHFLKLGLNSYT----YLGNRCIDLYTEFGNINDALKVFDDISYKNSTSWNICLKGLFK 93
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE---RNAASYNAMI 137
SG + +FD MP+++VVSWN M++G A F M R + +++
Sbjct: 94 SGQVGKACYMFDEMPVRDVVSWNTMISGYASCGFSSHALGVFVEMQGAGVRPSGFTFSIL 153
Query: 138 SGFIKFGRLCDAQRLF-----KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR 192
+ + C A+ + M NVV +I Y K + + +M +
Sbjct: 154 TSLVSSS--CRAKEVHGMMIRSGMELSNVVIGNSLIAMYGKFDL---VDYCFGVILSMKQ 208
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRM------PQK---------------------- 224
+ +SW +I G E A E F M P +
Sbjct: 209 LDFISWNSLIWACHRAGRQELALEQFCCMKAAELLPDEFTCSTLMSVCSNLRDLEKGKQV 268
Query: 225 -----------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
N + S+A I F K ++++A LF++ D A N MI+ YA++ G
Sbjct: 269 FAFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFEEQEQWDSALCNSMISCYARHDLG 328
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
E+AL LF +R ++P L ++ + ++ G Q +ALV K GF+SD V N+L
Sbjct: 329 EDALQLFMPTLRKNIRPTKYTVSCLLSSVSIFLPVEVGNQIHALVHKFGFESDSVVTNSL 388
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
V MY+K G I ++ F + D+VSWNTI+ + + F+++ G+ PD
Sbjct: 389 VDMYAKFGFIDNALNIFNEIKTKDLVSWNTIMMGLSYNGKVCVTMDLFEELRREGMPPDR 448
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
IT ++L C +DE + +F+ M ++G+ P EHY+ +V+++ RAG L+ A +I+
Sbjct: 449 ITLAAVLLACNYGNLVDEGIKIFSQMEMEFGVKPEEEHYSYVVEMLCRAGNLKEAVDIVE 508
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 172/389 (44%), Gaps = 35/389 (8%)
Query: 4 SIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKM 63
SI+ S+ + S A+ H +++ + S +V N IA + + + V M
Sbjct: 151 SILTSLV---SSSCRAKEVHGMMIRSGMELS-NVVIGNSLIAMYGKFDLVDYCFGVILSM 206
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SWNAMVAGCVQNDMLDEAF 119
D ++WNS++ A +G + + F M ++ + + +++ C L++
Sbjct: 207 KQLDFISWNSLIWACHRAGRQELALEQFCCMKAAELLPDEFTCSTLMSVCSNLRDLEKGK 266
Query: 120 NYFAAMPERNAASYNAMISG-----FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV 174
F A + YN+++S F K RL DA RLF+E + MI Y +
Sbjct: 267 QVF-AFCFKVGFVYNSIVSSAAIDLFSKCNRLEDAVRLFEEQEQWDSALCNSMISCYARH 325
Query: 175 KEGGGIARARALFDAMPRRNEVSWTVMINGL---------VENGLYEEAW-ELFGRMPQK 224
G A LF R+N ++ L VE G A FG +
Sbjct: 326 DLG---EDALQLFMPTLRKNIRPTKYTVSCLLSSVSIFLPVEVGNQIHALVHKFGF--ES 380
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+ V + +++ + K G +D A +F +I+ +D+ SWN ++ G + NG+ ++LF ++
Sbjct: 381 DSVVTNSLVDMYAKFGFIDNALNIFNEIKTKDLVSWNTIMMGLSYNGKVCVTMDLFEELR 440
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSI 343
R GM PD + ++ AC L+D+G + ++ + ++ G + + +V M + G++
Sbjct: 441 REGMPPDRITLAAVLLACNYGNLVDEGIKIFSQMEMEFGVKPEEEHYSYVVEMLCRAGNL 500
Query: 344 ---VDSELAFGQTSQPDIVSWNTIIAAFA 369
VD + DI W +I++A A
Sbjct: 501 KEAVDIVEKMPYKTTTDI--WRSILSACA 527
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 185/352 (52%), Gaps = 16/352 (4%)
Query: 118 AFNYFAAMPERNAASYNAMIS--GFIKFG---RLC-DAQRLFKEM----PCPNVVSYTVM 167
A N F + YN MI G I+ G C A L+K+M PN +++ +
Sbjct: 75 ANNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVPNNLTFPFL 134
Query: 168 IDGYVKVKEGGGIARA-RALFDAMPRRNEV-SWTVMINGLVENGLYEEAWELFGRMPQKN 225
+ G +++ GG + A N+V +I+ + GL + A ++F M ++
Sbjct: 135 VKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEMFVRD 194
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM-V 284
VV+ +M+ G+ + G+V+ A LF+++ R+I +WN +ITG Q G +E+L +F +M
Sbjct: 195 VVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHEMQF 254
Query: 285 RTG---MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+G ++PD + S+ +ACA L +D G+ +A + K+ + D+ + ALV MY KCG
Sbjct: 255 LSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMYGKCG 314
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+ + F + D +W +I+ FA H KA F +M GV+P+ +TF+ LLS
Sbjct: 315 DVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLS 374
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
C +G +++ F++M Y I P+ HYAC+VD++SRA A +IR
Sbjct: 375 ACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIR 426
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 175/370 (47%), Gaps = 55/370 (14%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
DV NS+++ + + G +++R +FD M +++VVSWN
Sbjct: 163 DVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWN----------------------- 199
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK---VKEGGGIARA 183
+M+ G+++ G + A LF++M N++++ +I G V+ KE I
Sbjct: 200 --------SMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFHE 251
Query: 184 RALF--DAMPRRNEVSWTVMIN-----GLVENGLYEEAWELFGRMPQKNVVASTAMITGF 236
D + + ++++ +++ G +++G + A+ L + +VV TA++ +
Sbjct: 252 MQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAY-LRKNDIECDVVIGTALVNMY 310
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
K G V +A +F + +D ++W MI+ +A +G G++A + F +M + G++P+ + FV
Sbjct: 311 GKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFV 370
Query: 297 SLFTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT-- 353
L +AC+ L++QGR + ++ + + + + +V + S+ + D L ++
Sbjct: 371 GLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSR-ARLFDEALFLIRSMP 429
Query: 354 SQPDIVSWNTIIAAFAQH---VLYYKARSYFDQMIAVGVRPDGITF-LSLLSVCCRAGKI 409
+PD+ W ++ H L K Y + + P F ++L + +AGK
Sbjct: 430 MKPDVYVWGALLGGCQMHGNIKLGEKVAHYL-----IDLEPHNHAFYINLCDIYVKAGKY 484
Query: 410 DESMNLFNLM 419
D + + N M
Sbjct: 485 DAAKRIRNSM 494
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 31/290 (10%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ N I+ F G AR+VFD+M +DVV+WNSM+ Y +G + + LF M
Sbjct: 163 DVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMN 222
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAM----------PER----NAASYNAMISGFI 141
+N+++WN+++ G VQ E+ F M P++ + S A++ G I
Sbjct: 223 GRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALL-GSI 281
Query: 142 KFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
G+ A ++ C +VV T +++ Y K G + +A +F+ MP ++ +WT M
Sbjct: 282 DHGKWVHAYLRKNDIEC-DVVIGTALVNMYGKC---GDVQQAIEIFNDMPEKDASAWTAM 337
Query: 202 INGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIR---- 253
I+ +G ++A++ F M + V V +++ G V++ F ++
Sbjct: 338 ISVFALHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYS 397
Query: 254 -CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
I + M+ ++ +EAL L M M+PD ++ +L C
Sbjct: 398 IEPQIYHYACMVDILSRARLFDEALFLIRSM---PMKPDVYVWGALLGGC 444
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 192/367 (52%), Gaps = 14/367 (3%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN-AASYNAMISGFIKFGRLCDAQRLFKEM 156
++VS NAMVA C + +D A N F E N S+N +I+G+ + G + A LF +M
Sbjct: 193 DLVSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKM 252
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN-GLVE------NG 209
V + + V G + A +N+ + I+ G+V+ N
Sbjct: 253 TERGVRFDEHTLASVLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNI 312
Query: 210 LYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQ 269
Y E ++ + K+ A +++I G+ QG++ +A LF + R+ W + +GYA+
Sbjct: 313 RYAEL--VYAGIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTALCSGYAK 370
Query: 270 NGRGEEALNLFSQMV-RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
+ + EE LF + V R + PD +I + + ACA+ A L G+Q + +++ D
Sbjct: 371 SQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHTYILRMRLKMDKK 430
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTS--QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ +A+V MYSKCG+I+ +E +F + D++ +N +IA +A H KA F M+
Sbjct: 431 LLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHHGFENKAIQLFHDMLK 490
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
V+PD +TF++LLS C G +++ +F + + DY + P HYAC+VD+ RA QL+
Sbjct: 491 KNVKPDAVTFVALLSACRHRGLVEQG-EIFFISMEDYSVLPEINHYACMVDMYGRANQLE 549
Query: 447 RACEIIR 453
+A E +R
Sbjct: 550 KALEFMR 556
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 185/376 (49%), Gaps = 20/376 (5%)
Query: 65 TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAA 124
T + T N ++ Y G + + LFD +P N SWNA++ ++ L +A F +
Sbjct: 24 TSSIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNLTQARAVFDS 83
Query: 125 MPERNAASYNAMISGFIKF-GRLCDAQRLFKEMPCP------NVVSYTVMIDGYVKVKEG 177
+R+ SYN+M+S ++ G +A LF +M + S T M++ K++
Sbjct: 84 AVDRDLVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRL- 142
Query: 178 GGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELF-GRMPQKNVVASTAM 232
+ + + M + ++ + + +IN + GL+ +A + G ++V+ AM
Sbjct: 143 --VCYGKQMHSYMVKTASDLSKFASSSLINMYSKCGLFRDACSVVSGFDGVVDLVSKNAM 200
Query: 233 ITGFCKQGKVDEAWTLF-QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
+ C++G++D A +F + D SWN +I GYAQNG ++AL LF +M G++ D
Sbjct: 201 VAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFD 260
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
+ S+ + C+ L L G+ +A V+K+ ++S+ +++ +V +Y KCG+I +EL +
Sbjct: 261 EHTLASVLSVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYA 320
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ +++I ++ KA+ FD ++ + + + +L S ++ + +E
Sbjct: 321 GIGIKSQFAVSSLIVGYSSQGEMMKAQRLFDSLL----ERNSVVWTALCSGYAKSQQCEE 376
Query: 412 SMNLFNLMVHDYGIPP 427
LF V + P
Sbjct: 377 VFKLFRKFVTREELIP 392
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 169/389 (43%), Gaps = 65/389 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDK-MPTKDVVTWNSMLTAYWHSGFPQHSRAL---- 90
D+ N +AA R G + A VF K D V+WN+++ Y +G+ + AL
Sbjct: 193 DLVSKNAMVAACCREGEMDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKM 252
Query: 91 ------FDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY--NAMISGFIK 142
FD + +V+S V +++ L + + + + N+ + + ++ + K
Sbjct: 253 TERGVRFDEHTLASVLS----VCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCK 308
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMI 202
G + A+ ++ + + + + +I GY G + +A+ LFD++ RN V WT +
Sbjct: 309 CGNIRYAELVYAGIGIKSQFAVSSLIVGY---SSQGEMMKAQRLFDSLLERNSVVWTALC 365
Query: 203 NGLVENGLYEEAWELFGR-------MPQKNVVAS-------------------------- 229
+G ++ EE ++LF + +P ++
Sbjct: 366 SGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACATQATLSLGKQIHTYILRMRL 425
Query: 230 -------TAMITGFCKQGKVDEAWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLF 280
+AM+ + K G + A FQ + R RD+ +N+MI GYA +G +A+ LF
Sbjct: 426 KMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILYNVMIAGYAHHGFENKAIQLF 485
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
M++ ++PD + FV+L +AC L++QG + + + +++ +V MY +
Sbjct: 486 HDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISMEDYSVLPEINHYACMVDMYGRA 545
Query: 341 GSIVDSELAFGQT--SQPDIVSWNTIIAA 367
+ + L F + Q D W + A
Sbjct: 546 NQL-EKALEFMRKIPIQIDATIWGAFLNA 573
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
IK GF S + N L+ +YSK G + D+ F + P+ SWN +I A+ + +AR
Sbjct: 19 IKSGFTSSIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNLTQAR 78
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRA-GKIDESMNLFNLM 419
+ FD V D +++ S+LS A G E+++LF+ M
Sbjct: 79 AVFDS----AVDRDLVSYNSMLSAYVGADGYETEAVDLFDKM 116
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 184/332 (55%), Gaps = 16/332 (4%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
N+++ + K G L A+++F EM +VV++T MI GY + A LF M R
Sbjct: 130 NSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRD 189
Query: 194 ----NEVSWTVMIN-----GLVENG--LYEEAWELFGRMPQKNVVASTAMITGFCKQGKV 242
NE + + ++ G +G ++ W+ +G Q+NV ++++ + + G++
Sbjct: 190 GLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWK-YGF--QENVFVGSSLVDMYARCGEL 246
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
E+ +F ++ ++ SWN +I+G+A+ G GEEAL LF +M R G + + +L +
Sbjct: 247 RESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSS 306
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
++ L+QG+ +A ++K G V N L+ MY+K G+I D++ F + + D+VS N
Sbjct: 307 STTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCN 366
Query: 363 TIIAAFAQHVLYYKARSYFDQMIA-VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
+++ +AQH L +A F++M+ V + P+ ITFLS+L+ C AG +DE + F LM
Sbjct: 367 SMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELM-K 425
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
YG+ P+ HY +VD+ RAG L +A I
Sbjct: 426 KYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIE 457
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 180/375 (48%), Gaps = 34/375 (9%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
HTH + F + D+ N + +++ G++ ARQVFD+M KDVVTW SM+T Y
Sbjct: 114 HTHLM---NSKFRN-DLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQ 169
Query: 81 SGFPQHSRA---LFDAM----------PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE 127
G+ + LF M + ++V + CV + + +
Sbjct: 170 DGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGF--Q 227
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
N ++++ + + G L +++ +F E+ N VS+ +I G+ + EG A LF
Sbjct: 228 ENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEG---EEALGLF 284
Query: 188 DAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQ--KNVVA--STAMITGFCKQ 239
M R E +++ ++ G E+ L M + K +V ++ + K
Sbjct: 285 VKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKS 344
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR-TGMQPDDLIFVSL 298
G + +A +F ++ D+ S N M+ GYAQ+G G+EA+ LF +M+ ++P+D+ F+S+
Sbjct: 345 GNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSV 404
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS--QP 356
TAC+ LLD+G + L+ K+G + LS +V ++ + G ++D +F + +P
Sbjct: 405 LTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAG-LLDQAKSFIEEMPIEP 463
Query: 357 DIVSWNTIIAAFAQH 371
+ W ++ A H
Sbjct: 464 NATIWGALLGASKMH 478
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 117/237 (49%), Gaps = 10/237 (4%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFC 237
G + R +++ + +R M+ L + L L + ++V +++ +
Sbjct: 85 GSLEPDRTIYNKLLKR-----CTMLGKLKQGKLVHT--HLMNSKFRNDLVIKNSILFMYA 137
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA---LNLFSQMVRTGMQPDDLI 294
K G ++ A +F ++ +D+ +W MITGY+Q+G A L LF +MVR G++P++
Sbjct: 138 KCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFA 197
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
SL C L G+Q + K+GF ++ V ++LV MY++CG + +S L F +
Sbjct: 198 LSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELE 257
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ VSWN +I+ FA+ +A F +M G T+ +LL G +++
Sbjct: 258 SKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQ 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 4/182 (2%)
Query: 270 NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSV 329
N L++ + ++PD I+ L C L L QG+ + ++ F +DL +
Sbjct: 69 NPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVI 128
Query: 330 NNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS---YFDQMIA 386
N+++ MY+KCGS+ + F + D+V+W ++I ++Q A + F +M+
Sbjct: 129 KNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVR 188
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
G+RP+ SL+ C G + + YG + LVD+ +R G+L+
Sbjct: 189 DGLRPNEFALSSLVKCCGFLGSCVDGKQIHGC-CWKYGFQENVFVGSSLVDMYARCGELR 247
Query: 447 RA 448
+
Sbjct: 248 ES 249
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 190/399 (47%), Gaps = 44/399 (11%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM- 125
DV S++TAY G S +F+ + +KNVV++NA ++G +QN F+ F M
Sbjct: 170 DVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMT 229
Query: 126 ----PERNAASYNAMISGF-----IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE 176
+ N + +++S I+ G+ + K C +V+ T ++D Y K
Sbjct: 230 MNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSM-KLEACDHVMVVTSLVDMYSKC-- 286
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF 236
G A +F +RN ++W MI G++ N E A ELF RM + ++
Sbjct: 287 -GCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILP-------- 337
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
D A+WN +I+G+AQ G EA FS+M G+ P I
Sbjct: 338 -------------------DSATWNSLISGFAQKGVCVEAFKYFSKMQCAGVAPCLKILT 378
Query: 297 SLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-Q 355
SL + C +L + + ++ D D + ALV Y KCG + + F Q +
Sbjct: 379 SLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVK 438
Query: 356 PDIVS-WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
PD + WN +I + + Y A F +M+ V+P+ TF+S+LS C +G+I+ +
Sbjct: 439 PDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLR 498
Query: 415 LFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F M+ YG+ P+ EH+ C+VD++ RAGQL A ++++
Sbjct: 499 FFR-MIRKYGLDPKPEHFGCVVDLLGRAGQLGEARDLVQ 536
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 145/279 (51%), Gaps = 11/279 (3%)
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMING 204
A LF EMP P + ++ ++ G + G +A LF + R N V+ +++
Sbjct: 90 ALELFDEMPQPTITAFNAVLSG---LSRNGPRGQAVWLFRQIGFWNIRPNSVTIVSLLSA 146
Query: 205 L-VENGLY-EEAWELFGRMP-QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
V+N + ++ L ++ + +V ST+++T + K G + + +F+ +R +++ ++N
Sbjct: 147 RDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYN 206
Query: 262 IMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
++G QNG ++F M + +P+ + VS+ +ACA+L+ + G+Q + L +K
Sbjct: 207 AFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSMK 266
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
+ V +LV MYSKCG + F ++ + ++++WN++IA + +A
Sbjct: 267 LEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVEL 326
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
F++M+ G+ PD T+ SL+S + G E+ F+ M
Sbjct: 327 FERMVDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKM 365
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 150/339 (44%), Gaps = 46/339 (13%)
Query: 44 IAAFSRAGNITAARQVFD---KMPTKD-VVTWNSMLTAY-----WHSGFPQHSRALFDAM 94
++A + NI +QV K+ D V+ S++ Y W S F SR+
Sbjct: 245 VSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRS----- 299
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQ 150
+N+++WN+M+AG + N + A F M + ++A++N++ISGF + G +A
Sbjct: 300 EKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGVCVEAF 359
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
+ F +M C V ++ + V + R+ R V
Sbjct: 360 KYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICV-------------- 405
Query: 211 YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQ--IRCRDIASWNIMITGYA 268
K+ +TA++ + K G V A +F Q ++ D A WN MI GY
Sbjct: 406 ------------DKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYG 453
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
NG E A +F +M+ +QP+ FVS+ +AC+ +++G + + ++ K+G D
Sbjct: 454 TNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFRMIRKYGLDPKPE 513
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
+V + + G + ++ + ++P +++++ A
Sbjct: 514 HFGCVVDLLGRAGQLGEARDLVQELAEPPASVFDSLLGA 552
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 35/262 (13%)
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARA-LFDAMPRRNEVSWTVMINGLVENG 209
L P PN ++ +++ + A LF + + T +I N
Sbjct: 25 HLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHTSTALIASYAANT 84
Query: 210 L-YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
+ A ELF MPQ + A A+++G + G +A LF+Q I WNI
Sbjct: 85 RSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQ-----IGFWNI------ 133
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
+P+ + VSL +A + +Q + L K G + D+
Sbjct: 134 --------------------RPNSVTIVSLLSA-RDVKNQSHVQQVHCLACKLGVEYDVY 172
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF-DQMIAV 387
V+ +LVT YSKCG +V S F ++V++N ++ Q+ + F D + +
Sbjct: 173 VSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNL 232
Query: 388 GVRPDGITFLSLLSVCCRAGKI 409
+P+ +T +S++S C I
Sbjct: 233 EEKPNKVTLVSVVSACATLSNI 254
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+I +T NG +EALNL+S + + P+ F L AC++L+ Q + +A + K
Sbjct: 4 DITVTKLVANGLYKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFK 63
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELA-FGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
GF S + AL+ Y+ L F + QP I ++N +++ +++ +A
Sbjct: 64 TGFHSHPHTSTALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVW 123
Query: 380 YFDQMIAVGVRPDGITFLSLLS 401
F Q+ +RP+ +T +SLLS
Sbjct: 124 LFRQIGFWNIRPNSVTIVSLLS 145
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 114/389 (29%), Positives = 188/389 (48%), Gaps = 52/389 (13%)
Query: 110 VQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYT 165
+Q +L A + F E +YNA+++ + + QR+ M P+V T
Sbjct: 24 LQQPLLQMALHGFNMKFE----NYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRT 79
Query: 166 VMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------G 219
+I Y K G A +FD MP RN VSWT MI+ + G +A LF G
Sbjct: 80 RLIVLYTKCDSLGD---AHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSG 136
Query: 220 RMP---------------------------------QKNVVASTAMITGFCKQGKVDEAW 246
P + +V ++++ + K GK+ EA
Sbjct: 137 TEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEAR 196
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
T+F+ + RD+ S +I+GYAQ G EEAL LF ++ GM+ + + + + TA + LA
Sbjct: 197 TVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLA 256
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
LD G+Q + V++ S + + N+L+ MYSKCG++ S F + ++SWN ++
Sbjct: 257 ALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLV 316
Query: 367 AFAQHVLYYKARSYFDQM-IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH-DYG 424
+++H + F M V+PD +T L++LS C G D+ +N+FN M
Sbjct: 317 GYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIE 376
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ P+ EHY C+VD++ R+G+++ A E I+
Sbjct: 377 VEPKMEHYGCVVDLLGRSGRVEEAFEFIK 405
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 140/291 (48%), Gaps = 32/291 (10%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNV 99
I +++ ++ A VFD+MP ++VV+W +M++AY G+ + LF M N
Sbjct: 82 IVLYTKCDSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNE 141
Query: 100 VSWNAMVAGCV---------QNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQ 150
++ ++ C Q L NY E + ++++ + K G++ +A+
Sbjct: 142 FTFATVLTSCTSSLGFILGRQIHSLIIKLNY-----EDHVFVGSSLLDMYAKDGKIHEAR 196
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGL- 205
+F+ +P +VVS T +I GY ++ G A LF + + N V++T ++ L
Sbjct: 197 TVFECLPERDVVSCTAIISGYAQL---GLDEEALELFRRLQGEGMKSNYVTYTGVLTALS 253
Query: 206 ----VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
++ G L +P VV ++I + K G + + +F + R + SWN
Sbjct: 254 GLAALDLGKQVHNHVLRSEIPS-FVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWN 312
Query: 262 IMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLIFVSLFTACASLALLDQG 311
M+ GY+++G G E L LF+ M T ++PD + +++ + C+ L D+G
Sbjct: 313 AMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKG 363
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 18/220 (8%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H V S+ V + +L I +S+ GN+T +R++FD M + V++WN+ML Y
Sbjct: 265 HNH---VLRSEIPSFVVLQNSL-IDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSK 320
Query: 81 SGFPQHSRALFDAMPMKNVVSWN-----AMVAGCVQNDMLDEAFNYFAAMP------ERN 129
G + LF M + V + A+++GC + D+ N F M E
Sbjct: 321 HGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPK 380
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR--ARALF 187
Y ++ + GR+ +A K+MP + + G +V I + L
Sbjct: 381 MEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLL 440
Query: 188 DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV 227
+ P N ++ ++ N G +E+ L M +K V
Sbjct: 441 EIEP-GNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVT 479
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 139/246 (56%)
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
N +A+++F +++V+ MI GF K K+D A LF ++ R+ +W MI GY
Sbjct: 161 NDRVNDAYKVFCESGYRDIVSYNVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGY 220
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+Q EA+ LF++M+ PD++ VS+ +ACA L L+QGR + + ++G D
Sbjct: 221 SQAKLCREAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQGRFVHDYITRNGIRVDS 280
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
+ LV +Y+KCG + + F + D+ +WN ++ FA H YF +M+
Sbjct: 281 YLTTGLVDLYAKCGCVEIARETFESCTNKDVFTWNAMLVGFAIHGQGLVLLEYFSRMVGE 340
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G++PDG+TFL +L C AG + E+ +F+ M YG+ +HY C+ D+++RAG ++
Sbjct: 341 GIKPDGVTFLGVLVGCSHAGLVCEARKVFDEMETVYGVAREGKHYGCMADMLARAGLIEE 400
Query: 448 ACEIIR 453
+ E+I+
Sbjct: 401 SRELIK 406
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 142/302 (47%), Gaps = 13/302 (4%)
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVV 162
N+++ ND +++A+ F R+ SYN MI GF+K +L A+ LF EMP N V
Sbjct: 152 NSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNVMIDGFVKNFKLDRARELFDEMPQRNEV 211
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELF 218
++ MI GY + K A LF+ M + ++ +++ + G E+ +
Sbjct: 212 TWGTMIAGYSQAKL---CREAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQGRFVH 268
Query: 219 GRMPQKNVVASTAMITG----FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
+ + + + + TG + K G V+ A F+ +D+ +WN M+ G+A +G+G
Sbjct: 269 DYITRNGIRVDSYLTTGLVDLYAKCGCVEIARETFESCTNKDVFTWNAMLVGFAIHGQGL 328
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNAL 333
L FS+MV G++PD + F+ + C+ L+ + R+ + + +G + +
Sbjct: 329 VLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEMETVYGVAREGKHYGCM 388
Query: 334 VTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
M ++ G I +S EL G + D+ +W ++ H A+ Q++ +
Sbjct: 389 ADMLARAGLIEESRELIKGMPNGGDVFAWGGLLGGCRIHGNVEIAKQAAQQVMEIKPEDG 448
Query: 393 GI 394
G+
Sbjct: 449 GV 450
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 115/272 (42%), Gaps = 26/272 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + N I +S + A +VF + +D+V++N M+ + + +R LFD MP
Sbjct: 147 DSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNVMIDGFVKNFKLDRARELFDEMP 206
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAM------PERNAASYNAMISGFIKFGRLCDA 149
+N V+W M+AG Q + EA F M P+ A +++S + G L +
Sbjct: 207 QRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFIPDNIALV--SVLSACAQLGEL-EQ 263
Query: 150 QRLFKEMPCPN---VVSY--TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMING 204
R + N V SY T ++D Y K G + AR F++ ++ +W M+ G
Sbjct: 264 GRFVHDYITRNGIRVDSYLTTGLVDLYAKC---GCVEIARETFESCTNKDVFTWNAMLVG 320
Query: 205 LVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIR-----CR 255
+G E F RM + + V ++ G G V EA +F ++ R
Sbjct: 321 FAIHGQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEMETVYGVAR 380
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
+ + M A+ G EE+ L M G
Sbjct: 381 EGKHYGCMADMLARAGLIEESRELIKGMPNGG 412
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 40/241 (16%)
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A +LF I ++N +I + AL +F + R + D F + A +
Sbjct: 66 ALSLFNSIPNPTTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLTLDFHTFPLILKASSQ 125
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN-- 362
L L + ++ V K+GF D V N+L+ +YS + D+ F ++ DIVS+N
Sbjct: 126 LHSLSLAQSLHSQVFKYGFLVDSFVMNSLIRVYSVNDRVNDAYKVFCESGYRDIVSYNVM 185
Query: 363 -----------------------------TIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
T+IA ++Q L +A F++MI + PD
Sbjct: 186 IDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFIPDN 245
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDY----GIPPRSEHYACLVDVMSRAGQLQRAC 449
I +S+LS C + G++++ VHDY GI S LVD+ ++ G ++ A
Sbjct: 246 IALVSVLSACAQLGELEQGR-----FVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIAR 300
Query: 450 E 450
E
Sbjct: 301 E 301
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 200/408 (49%), Gaps = 19/408 (4%)
Query: 64 PTKDVVTWNS--MLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
PTKD+ + N+ ++ + G + + L P ++ ++ C++ + L + +
Sbjct: 37 PTKDIKSNNNDDLIQSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDV 96
Query: 122 FAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
+ +++ +I+ + G + A ++F E + + + G
Sbjct: 97 HHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRG 156
Query: 178 GGIARARALFD--AMPRRNEVSWTVMINGLVENGL----YEEAWELFGRMP----QKNVV 227
+ + +P N ++T ++ V + L + E+ + + +V
Sbjct: 157 EDLLVLYGQMNWIGIPS-NRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVH 215
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
T ++ + + G V A ++F + ++I SW+ MI YA+N +AL LF M+
Sbjct: 216 VMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEA 275
Query: 288 MQ--PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
P+ + VS+ ACASLA L+ G+ +A V++ G DS L V N L+TMY +CG I
Sbjct: 276 CDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEIST 335
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
+ F + D++SWN++I+ + H L KA F+ MI GV P ITF+++L C
Sbjct: 336 GQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSH 395
Query: 406 AGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
AG ++E+ LF M++ Y I PR EHYAC+VD++ RA +L A E+I+
Sbjct: 396 AGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQ 443
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 161/363 (44%), Gaps = 33/363 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D Y A I + G++ A +VFD+ K + WN++ A + + L+ M
Sbjct: 108 DPYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMN 167
Query: 96 M----KNVVSWNAMVAGCVQNDM----LDEAFNYFAAMP----ERNAASYNAMISGFIKF 143
N ++ ++ CV +++ L + A + E + ++ + +F
Sbjct: 168 WIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARF 227
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF--------DAMPRRNE 195
G + A +F MP N+VS++ MI Y K + +A LF D +P N
Sbjct: 228 GYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMP---MKALELFQIMMLEACDTVP--NP 282
Query: 196 VSWTVMINGL-----VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQ 250
++ ++ +E+G A+ L + V +T +IT + + G++ +F
Sbjct: 283 ITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNT-LITMYGRCGEISTGQRVFD 341
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
++ RD+ SWN +I+ Y +G G++A+ +F M+ G+ P + F+++ AC+ L+++
Sbjct: 342 YMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEE 401
Query: 311 GRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAF 368
+ + +++ K+ + +V + + + ++ EL +P W +++ +
Sbjct: 402 AKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSC 461
Query: 369 AQH 371
H
Sbjct: 462 RIH 464
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 127/319 (39%), Gaps = 60/319 (18%)
Query: 3 SSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDK 62
+ ++ +++ P H H L +H V+ + ++R G ++ A VF
Sbjct: 184 ACVVSELSICPLRKGKEIHAHIL----RHGYEGHVHVMTTLLDVYARFGYVSYASSVFGA 239
Query: 63 MPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK------NVVSWNAMVAGCVQNDMLD 116
MP K++V+W++M+ Y + P + LF M ++ N ++ +++ C L+
Sbjct: 240 MPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALE 299
Query: 117 EAFNYFAAMPERNAAS----YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV 172
A + R S N +I+ + + G + QR+F
Sbjct: 300 HGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVF------------------- 340
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS-TA 231
D M +R+ +SW +I+ +GL ++A ++F M + V S
Sbjct: 341 ---------------DYMKKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYIT 385
Query: 232 MITGFC---KQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQM 283
IT C G V+EA LF+ + + + + M+ + R +EA+ L M
Sbjct: 386 FITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRANRLDEAIELIQNM 445
Query: 284 VRTGMQPDDLIFVSLFTAC 302
+P ++ SL +C
Sbjct: 446 ---DFKPGPTVWGSLLGSC 461
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/480 (26%), Positives = 218/480 (45%), Gaps = 82/480 (17%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H + H + + +N + +S+ + +A+ V + VVTW S+++ H
Sbjct: 29 HAH---IIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCVH 85
Query: 81 S-----------------------GFPQHSRA-----------LFDAMPMKNVVSWNAMV 106
+ FP +A + +K + ++ V
Sbjct: 86 NRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASALMQIPMTGKQIHGLALKGGMIYDVFV 145
Query: 107 AGCVQNDML------DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC-- 158
GC DM +A N F MP RN A++NA IS ++ R D FKE C
Sbjct: 146 -GCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVH 204
Query: 159 --PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
PN +++ ++ A D M ++ ++ + Y+E
Sbjct: 205 GEPNSITFCAFLN---------------ACVDMM----RLNLGRQLHAFIVRCGYKE--- 242
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-DIASWNIMITGYAQNGRGEE 275
+V + +I + K G + A +F +I R ++ SW M+T QN E
Sbjct: 243 --------DVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHEEER 294
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
A +F Q VR ++P D + S+ +ACA L L+ GR +AL +K ++ V +ALV
Sbjct: 295 ACMVFLQ-VRKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVD 353
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI--AVGVRPDG 393
+Y KCGSI ++E F + + ++V+WN +I +A A F++M + G+RP
Sbjct: 354 LYGKCGSIENAEQVFSELPESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSY 413
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+T +S+LSVC R G ++ + +F M +YGI P +EH+AC+VD++ R+G + RA E I+
Sbjct: 414 VTLVSILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQ 473
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 155/365 (42%), Gaps = 39/365 (10%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
YDV+ + + G A +FD+MP +++ TWN+ + S Q R+L
Sbjct: 141 YDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYI-----SNAVQDRRSLDVIA 195
Query: 95 PMK---------NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFI 141
K N +++ A + CV L+ A + + + + N +I +
Sbjct: 196 AFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYG 255
Query: 142 KFGRLCDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
K G + A+ +F + NVVS+ M+ V+ E RA + R EV T
Sbjct: 256 KCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHE-----EERACMVFLQVRKEVEPTD 310
Query: 201 MINGLVENGLYEEAWELFGR---------MPQKNVVASTAMITGFCKQGKVDEAWTLFQQ 251
+ V + E GR + N+ +A++ + K G ++ A +F +
Sbjct: 311 FMISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSE 370
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMV--RTGMQPDDLIFVSLFTACASLALLD 309
+ ++ +WN MI GYA G + AL LF +M G++P + VS+ + C+ + ++
Sbjct: 371 LPESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVE 430
Query: 310 QGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS--QPDIVSWNTIIA 366
+G Q + ++ + +G + +V + + G +VD F Q QP I W ++
Sbjct: 431 RGIQIFESMRLNYGIEPGAEHFACVVDLLGRSG-LVDRAYEFIQNMPIQPTISVWGALLG 489
Query: 367 AFAQH 371
A H
Sbjct: 490 ACRMH 494
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 53/308 (17%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPT-KDVVTWNSMLTAYWHSGFPQHSRALF--- 91
DV AN I + + G+I +A VF ++ K+VV+W SMLTA + + + +F
Sbjct: 243 DVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQV 302
Query: 92 --DAMP----MKNVVSWNAMVAG--------------CVQNDM---------------LD 116
+ P + +V+S A + G CV++++ ++
Sbjct: 303 RKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIE 362
Query: 117 EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN---VVSYTVMIDGYVK 173
A F+ +PE N ++NAMI G+ G + A RLF+EM + SY ++
Sbjct: 363 NAEQVFSELPESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSV 422
Query: 174 VKEGGGIARARALFDAMPRRNEVS-----WTVMINGLVENGLYEEAWELFGRMPQKNVVA 228
G + R +F++M + + +++ L +GL + A+E MP + ++
Sbjct: 423 CSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTIS 482
Query: 229 STAMITGFCK-QGKVD----EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
+ G C+ GK + A LF ++ D + ++ A GR EEA + +M
Sbjct: 483 VWGALLGACRMHGKTELGKIAAEKLF-ELDHVDSGNHVVLSNMLASAGRWEEATVVRKEM 541
Query: 284 VRTGMQPD 291
G++ +
Sbjct: 542 KDIGIKKN 549
>Medtr2g026210.1 | PPR containing plant-like protein | HC |
chr2:9478558-9480181 | 20130731
Length = 467
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 167/335 (49%), Gaps = 31/335 (9%)
Query: 119 FNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP-NVVSYTVMIDGYVKVKEG 177
F+ F + +N + + ++ G G+L DA RL P + +Y++M+ + K
Sbjct: 11 FSAFRSSLAKNTQNLDKVLQGLCVSGKLEDAIRLLYRTGFPVHPRTYSLMLQECIFWKNY 70
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFC 237
G R R + M + G +P N ++ +
Sbjct: 71 G---RGRRIHAHMI-------------------------IVGYVP--NEYLKIKLLILYA 100
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
K G ++ A LF + +D +WN MI GY Q G E L F +M + ++PD F S
Sbjct: 101 KSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFAS 160
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
+F ACA+LALL+ GRQ + +++K ++ VN+AL+ MY KC I D L F + +
Sbjct: 161 VFRACATLALLEPGRQAHGVMLKCQIGDNVVVNSALIDMYFKCSCICDGRLLFDKCLSRN 220
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN 417
++W T+I+ + +H + F +MI+ RP+ +TFL++L C G IDE+ F
Sbjct: 221 TITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACSHVGLIDEAYKYFQ 280
Query: 418 LMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
M+ DY + P ++HYA +VD++ R+G+L+ A E +
Sbjct: 281 SMIRDYEMVPHAKHYAAMVDLLGRSGKLKEAYEFV 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 31/258 (12%)
Query: 73 SMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS 132
+L Y SG + ++ LF+ + K+ +WNAM+AG VQ + + F M + AS
Sbjct: 94 KLLILYAKSGCLETAQFLFNNLVEKDSFAWNAMIAGYVQKGLEEVGLETFYEMRQ---AS 150
Query: 133 YNAMISGFIKFGRLCDAQRLFKE--------MPCP---NVVSYTVMIDGYVKVKEGGGIA 181
F R C L + + C NVV + +ID Y K I
Sbjct: 151 LRPDQYTFASVFRACATLALLEPGRQAHGVMLKCQIGDNVVVNSALIDMYFKC---SCIC 207
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFC 237
R LFD RN ++WT +I+G ++G E + F RM + N V A++
Sbjct: 208 DGRLLFDKCLSRNTITWTTLISGYGKHGQVVEVLDSFHRMISESFRPNYVTFLAVLVACS 267
Query: 238 KQGKVDEAWTLFQQIRCRDI------ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
G +DEA+ FQ + RD + M+ ++G+ +EA + ++++ +
Sbjct: 268 HVGLIDEAYKYFQSM-IRDYEMVPHAKHYAAMVDLLGRSGKLKEA---YEFVLKSPYKEH 323
Query: 292 DLIFVSLFTACASLALLD 309
+I+ +L AC LD
Sbjct: 324 SVIWGALLGACKIHGDLD 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 237 CKQGKVD-EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
CK ++ + ++ F+ ++ + + ++ G +G+ E+A+ L + RTG +
Sbjct: 1 CKLAIINGKIFSAFRSSLAKNTQNLDKVLQGLCVSGKLEDAIRL---LYRTGFPVHPRTY 57
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
+ C +GR+ +A +I G+ + + L+ +Y+K G + ++ F +
Sbjct: 58 SLMLQECIFWKNYGRGRRIHAHMIIVGYVPNEYLKIKLLILYAKSGCLETAQFLFNNLVE 117
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
D +WN +IA + Q L F +M +RPD TF S+ C
Sbjct: 118 KDSFAWNAMIAGYVQKGLEEVGLETFYEMRQASLRPDQYTFASVFRAC 165
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 156/315 (49%), Gaps = 40/315 (12%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA--------- 228
G + A +FD P R+ V+WT +ING V+NG+ EA F M K VV
Sbjct: 155 GFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVL 214
Query: 229 -STAMITGFC------------------------------KQGKVDEAWTLFQQIRCRDI 257
+ A++ +C K G ++A +F ++ RD+
Sbjct: 215 RAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDV 274
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+W +++ G+ Q + ++AL+ F +M+ + P++ S+ +ACA + LDQGR +
Sbjct: 275 VAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRY 334
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+ + + + + +LV MY+KCG + + + F ++ +W +I A H A
Sbjct: 335 MEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGA 394
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
+ F +M+ G+RP+ +TFL +L C G +DE LF +M H Y + P EHY C+VD
Sbjct: 395 LNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVD 454
Query: 438 VMSRAGQLQRACEII 452
++ RAG L+ A +II
Sbjct: 455 LLGRAGCLEDAKQII 469
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 176/344 (51%), Gaps = 24/344 (6%)
Query: 25 LLVFAKHFS---SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHS 81
+V+A+ F +D + N I+AF +G + A +VFD+ P +D+V W +++ + +
Sbjct: 126 FMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKN 185
Query: 82 GFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDML--DEAFNY----FAAMPER---NAAS 132
G P + F M +K VV VA ++ L D F F R + +
Sbjct: 186 GVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSV 245
Query: 133 YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK---EGGGIARARALFDA 189
Y A++ + K G DA ++F EMP +VV++TV++ G+V+ K + R L +
Sbjct: 246 YCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNV 305
Query: 190 MPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEA 245
+P NE + T +++ G ++ + M N V T+++ + K G VD+A
Sbjct: 306 VP--NEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKA 363
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
+F+ ++ +++ +W MI G A +G ALN+FS+M+ +G++P+D+ F+ + AC+
Sbjct: 364 LMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHG 423
Query: 306 ALLDQGRQTYALVIKHGF--DSDLSVNNALVTMYSKCGSIVDSE 347
+D+G++ + + ++H + ++ +V + + G + D++
Sbjct: 424 GFVDEGKKLFEM-MRHTYHLKPNMEHYGCMVDLLGRAGCLEDAK 466
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 7/206 (3%)
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
L I + +N +IT + + L +++M G+QPD F L + +
Sbjct: 65 LLNTIHTPNTRLFNKLITSFPKT-----TLLSYAKMHEMGVQPDKHTFPLLLKIFSKNGV 119
Query: 308 LDQGR--QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
+ YA V K GFD D V N ++ + G + ++ F ++ + DIV+W +I
Sbjct: 120 PNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALI 179
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
F ++ + +A F +M GV DG T S+L G + V +
Sbjct: 180 NGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRV 239
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEI 451
Y LVD+ + G + AC++
Sbjct: 240 VLDGSVYCALVDMYFKCGYCEDACKV 265
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 156/315 (49%), Gaps = 40/315 (12%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA--------- 228
G + A +FD P R+ V+WT +ING V+NG+ EA F M K VV
Sbjct: 155 GFMKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVL 214
Query: 229 -STAMITGFC------------------------------KQGKVDEAWTLFQQIRCRDI 257
+ A++ +C K G ++A +F ++ RD+
Sbjct: 215 RAAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDV 274
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+W +++ G+ Q + ++AL+ F +M+ + P++ S+ +ACA + LDQGR +
Sbjct: 275 VAWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVHRY 334
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+ + + + + +LV MY+KCG + + + F ++ +W +I A H A
Sbjct: 335 MEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGA 394
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
+ F +M+ G+RP+ +TFL +L C G +DE LF +M H Y + P EHY C+VD
Sbjct: 395 LNIFSRMLESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVD 454
Query: 438 VMSRAGQLQRACEII 452
++ RAG L+ A +II
Sbjct: 455 LLGRAGCLEDAKQII 469
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 176/344 (51%), Gaps = 24/344 (6%)
Query: 25 LLVFAKHFS---SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHS 81
+V+A+ F +D + N I+AF +G + A +VFD+ P +D+V W +++ + +
Sbjct: 126 FMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALINGFVKN 185
Query: 82 GFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDML--DEAFNY----FAAMPER---NAAS 132
G P + F M +K VV VA ++ L D F F R + +
Sbjct: 186 GVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRVVLDGSV 245
Query: 133 YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK---EGGGIARARALFDA 189
Y A++ + K G DA ++F EMP +VV++TV++ G+V+ K + R L +
Sbjct: 246 YCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSFFRRMLLDNV 305
Query: 190 MPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEA 245
+P NE + T +++ G ++ + M N V T+++ + K G VD+A
Sbjct: 306 VP--NEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYAKCGCVDKA 363
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
+F+ ++ +++ +W MI G A +G ALN+FS+M+ +G++P+D+ F+ + AC+
Sbjct: 364 LMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLGVLGACSHG 423
Query: 306 ALLDQGRQTYALVIKHGF--DSDLSVNNALVTMYSKCGSIVDSE 347
+D+G++ + + ++H + ++ +V + + G + D++
Sbjct: 424 GFVDEGKKLFEM-MRHTYHLKPNMEHYGCMVDLLGRAGCLEDAK 466
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 7/206 (3%)
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
L I + +N +IT + + L +++M G+QPD F L + +
Sbjct: 65 LLNTIHTPNTRLFNKLITSFPKT-----TLLSYAKMHEMGVQPDKHTFPLLLKIFSKNGV 119
Query: 308 LDQGR--QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
+ YA V K GFD D V N ++ + G + ++ F ++ + DIV+W +I
Sbjct: 120 PNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWTALI 179
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
F ++ + +A F +M GV DG T S+L G + V +
Sbjct: 180 NGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVETGRV 239
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEI 451
Y LVD+ + G + AC++
Sbjct: 240 VLDGSVYCALVDMYFKCGYCEDACKV 265
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/506 (24%), Positives = 239/506 (47%), Gaps = 65/506 (12%)
Query: 8 SIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKD 67
+ ++ PS A H H+ K S + AN + + ++ N+ A ++FD++ K+
Sbjct: 42 TTSIGSPPSLRALHGHYF----KKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKN 97
Query: 68 VVTWNSMLTAYWHS-GFPQHSRALFDAMPMK----NVVSWNAMVAGC------------- 109
TW +++ + + G + +LF M N + ++++ C
Sbjct: 98 TQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIH 157
Query: 110 -------------VQNDMLD-----EAFNY----FAAMPERNAASYNAMISGFIKFGRLC 147
++N +LD + F Y F M E++ S+N MI +++ G +
Sbjct: 158 AWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVE 217
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVK-EGGGIARARALFDAMPRRNEVSWTVMINGLV 206
+ +F+ P +VVS+ +IDG ++ E + + + + V++++ + +
Sbjct: 218 KSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVS 277
Query: 207 ENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQI---------- 252
L E +L GR+ + ++++ + K G++D+A T+ + +
Sbjct: 278 SLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNF 337
Query: 253 --RCRD----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
C++ + SW+ M++GY NG+ E+ + F MV + D ++ +ACA+
Sbjct: 338 GVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAG 397
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
+L+ G+Q +A + K G D V ++L+ MYSK GS+ D+ + F Q +P++V W ++I+
Sbjct: 398 ILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMIS 457
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
A H +A S F+ M+ +G+ P+ +TF+ +L+ C G I+E F +M Y I
Sbjct: 458 GCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHIN 517
Query: 427 PRSEHYACLVDVMSRAGQLQRACEII 452
P EHY +V++ RAG L A I
Sbjct: 518 PEVEHYTSMVNLYGRAGHLIEAKNFI 543
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 174/340 (51%), Gaps = 19/340 (5%)
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
R+ + ++S ++K G DA LF EMP + VS+ ++ G K+ G + ++F
Sbjct: 78 RDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKI---GQLGECLSVF 134
Query: 188 -----DAMPRRNEVSWTVMINGLVENGLYEEAWEL------FGRMPQKNVVASTAMITGF 236
D+ + NE ++ +I+ V +E + + G + + VV A++ +
Sbjct: 135 CKMKSDSELKLNEFTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVV--NALVNMY 192
Query: 237 CKQGKVDEAWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
K G V+ A+ LF ++ + I SWN ++ AQNG EA N F M G PDD
Sbjct: 193 GKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFFPDDAT 252
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
VSL AC + L + ++ G D +L++ L+ +YSK G + +S F + S
Sbjct: 253 MVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEIS 312
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESM 413
+PD V+W ++A +A H +A +F++++ G+ PD +TF LLS C +G + E
Sbjct: 313 KPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGK 372
Query: 414 NLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F +M Y + PR +HY+C+VD++ R G L A E+I+
Sbjct: 373 YFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIK 412
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 155/366 (42%), Gaps = 54/366 (14%)
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDE 117
V + +D + +++ Y G + + LFD MP K+ VSWN++V+G + L E
Sbjct: 70 HVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGE 129
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
+ F M + N F+ C +++ E + + + + VKV
Sbjct: 130 CLSVFCKMKSDSELKLNEFT--FLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNA 187
Query: 178 --------GGIARARALFDAMPRRNE--VSWTVMINGLVENGLYEEAWELF--------- 218
G + A LF MP + VSW ++ +NG+ EA+ F
Sbjct: 188 LVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNGFF 247
Query: 219 ------------------GRMPQ------------KNVVASTAMITGFCKQGKVDEAWTL 248
GRM + +N+ T ++ + K G+++ + +
Sbjct: 248 PDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKV 307
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR-TGMQPDDLIFVSLFTACASLAL 307
F++I D +W M+ GYA +G G+EA+ F ++VR GM+PD + F L +AC+ L
Sbjct: 308 FEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGL 367
Query: 308 LDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTII 365
+ +G+ + ++ + L + +V + +CG + D+ EL +P+ W ++
Sbjct: 368 VKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALL 427
Query: 366 AAFAQH 371
A H
Sbjct: 428 GACRVH 433
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 170/349 (48%), Gaps = 43/349 (12%)
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
GR C AQ + ++++ ++I+ Y K + AR +FD MP ++ VSW MI
Sbjct: 75 GRACHAQFILVGFE-TDILTSNMLINMYSKC---SLVHDARIVFDEMPVKSVVSWNTMIG 130
Query: 204 GLVENGLYEEAWELFGRMPQK--------------------------------------- 224
L +EA LF +M ++
Sbjct: 131 ALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECMQLHAFSIKVSVDS 190
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
N TA++ + K + +A +F+ + + +W+ ++ GY QNG E AL LF
Sbjct: 191 NCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQ 250
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
G + D + S ACA LA L +G+Q +A+ K GF S++ V ++L+ MY+KCG I
Sbjct: 251 LMGFEQDAFLISSAVCACAGLATLIEGKQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIR 310
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
++ + F IV WN +I+ F +H +A F++M G+ PD +T++S+L+ C
Sbjct: 311 EAYIVFQGEELRSIVLWNAMISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVLNACS 370
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G ++ F+LMV ++ + P HY+C+VD++ RAG + +A ++I
Sbjct: 371 HMGLHEQGHKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIE 419
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 157/338 (46%), Gaps = 35/338 (10%)
Query: 6 IVSIALKPTPSSTAR--HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKM 63
I+ + K S R H F+LV + D+ +N+ I +S+ + AR VFD+M
Sbjct: 62 ILQLCAKSRSSIAGRACHAQFILVGFE----TDILTSNMLINMYSKCSLVHDARIVFDEM 117
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNVVSWNAMVAGCVQNDMLDEAF 119
P K VV+WN+M+ A Q + LF M + N + ++++ C + E
Sbjct: 118 PVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNEFTISSVLCECAFKCAILECM 177
Query: 120 NYFA----AMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK 175
A + N A++ + K + DA ++F+ MP N V+++ ++ GYV+
Sbjct: 178 QLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQ-- 235
Query: 176 EGGGIARARALF-----------DAMPRRNEVSWTVMINGLVENGLYE--EAWELFGRMP 222
G+ A L DA + V + L+E FG
Sbjct: 236 --NGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQVHAISCKSGFG--- 290
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
N+ ++++I + K G + EA+ +FQ R I WN MI+G+ ++ EA+ LF +
Sbjct: 291 -SNIYVTSSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAMISGFGRHACALEAMILFEK 349
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
M + G+ PDD+ +VS+ AC+ + L +QG + + L+++
Sbjct: 350 MQQRGLFPDDVTYVSVLNACSHMGLHEQGHKYFDLMVR 387
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 51/227 (22%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF----------DA 93
+ +++ +I A ++F+ MP + VTW+S+L Y +G + + LF DA
Sbjct: 199 LHVYAKCSSIKDASKMFESMPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMGFEQDA 258
Query: 94 MPMKNVVSWNAMVAGCVQN-----------------------DM------LDEAFNYFAA 124
+ + V A +A ++ DM + EA+ F
Sbjct: 259 FLISSAVCACAGLATLIEGKQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQG 318
Query: 125 MPERNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGI 180
R+ +NAMISGF + +A LF++M P+ V+Y +++ G
Sbjct: 319 EELRSIVLWNAMISGFGRHACALEAMILFEKMQQRGLFPDDVTYVSVLNA---CSHMGLH 375
Query: 181 ARARALFDAMPRRNE-----VSWTVMINGLVENGLYEEAWELFGRMP 222
+ FD M R + + ++ M++ L GL +A++L RMP
Sbjct: 376 EQGHKYFDLMVREHNLRPSVLHYSCMVDILGRAGLVHKAYDLIERMP 422
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 179/338 (52%), Gaps = 8/338 (2%)
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNV--VSYTV-MIDGYVKVKEGG 178
F+ + N Y+A+I + + G + RL+ M NV VS+T + +K G
Sbjct: 69 FSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSLG 128
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCK 238
A V T+ I+ V+ G+ + A ++F MP ++VV T +I + +
Sbjct: 129 SQLHLHAFLFGFVNDLYVGNTI-IHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYAR 187
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
G +D A LF + +D+ +W M+TGY+QN ++AL F +M G+ D++ V
Sbjct: 188 SGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITLVGA 247
Query: 299 FTACASLAL---LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
+ACA L + D R+ A + G S++ V +AL+ MYSKCG++ ++ F +
Sbjct: 248 ISACAQLGVSGYADWIREI-AESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKE 306
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
++ S++++I FA H A F +M+ G++P+ +TF+ L + C AG +++ L
Sbjct: 307 MNVFSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQL 366
Query: 416 FNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F M YG+ P ++HYAC+ D++ RAG L++A ++++
Sbjct: 367 FGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQ 404
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 171/424 (40%), Gaps = 75/424 (17%)
Query: 4 SIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKM 63
S + S+ P+ S FL F D+Y N I + + G + AR+VFD+M
Sbjct: 116 SALFSLLKNPSLGSQLHLHAFLFGFVN-----DLYVGNTIIHMYVKFGVLDCARKVFDEM 170
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
P +DVVTW ++ AY SG + LF +P+K++V+W +MV G QN M +A +F
Sbjct: 171 PHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFR 230
Query: 124 AMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
M E + + G I C ++ + I + G +
Sbjct: 231 KMREAGVVTDEITLVGAIS---AC------AQLGVSGYADWIREIAESSRFGSGSNVFVG 281
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVD 243
AL D + V EEA+ +F M + NV + ++MI GF G+
Sbjct: 282 SALIDMYSKCGNV---------------EEAYNVFKGMKEMNVFSYSSMIVGFAVHGRAR 326
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
A + LF +M+ G++P+ + FV LFTAC+
Sbjct: 327 SA-------------------------------IKLFYEMLENGIKPNHVTFVGLFTACS 355
Query: 304 SLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT--SQPDIVS 360
+++QG+Q + + + +G + + + G + + L QT +P+
Sbjct: 356 HAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHL-EKALQLVQTMPMEPNGGV 414
Query: 361 WNTIIAAFAQH----VLYYKARSYFDQMIAVGVRPDGI-TFLSLLSVCCRAGKIDESMNL 415
W ++ A H V +RS F+ + PD + +L L A K D+ +
Sbjct: 415 WGALLGASHIHGNPDVAEIASRSLFE------LEPDNLGNYLLLSKTYALAAKWDDVSRV 468
Query: 416 FNLM 419
LM
Sbjct: 469 RKLM 472
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 34/191 (17%)
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
LF Q+ + ++ +I YA+NG ++ L++ M+ + P F +LF+ + +L
Sbjct: 68 LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSL 127
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
G Q + GF +DL V N ++ MY K G + + F + D+V+W +I A
Sbjct: 128 ---GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVA 184
Query: 368 FA-------------------------------QHVLYYKARSYFDQMIAVGVRPDGITF 396
+A Q+ + KA +F +M GV D IT
Sbjct: 185 YARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEITL 244
Query: 397 LSLLSVCCRAG 407
+ +S C + G
Sbjct: 245 VGAISACAQLG 255
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 210/463 (45%), Gaps = 46/463 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ AN I ++ G + R+VFD+M ++VV+W S++ Y + + LF M
Sbjct: 166 DLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMV 225
Query: 96 M----KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLC 147
N V+ ++ C + L+ M E N NA++ ++K G +
Sbjct: 226 EVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMY 285
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVK--------------VKEG---------------- 177
+ +F E N+V Y ++ YV+ +++G
Sbjct: 286 AVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACA 345
Query: 178 -------GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST 230
G + A + + R + +S +I+ ++ G E A ++F M K VV
Sbjct: 346 QLGDLSVGKSSHAYVFRNGLERLDNIS-NAIIDMYMKCGKREAACKVFDSMSNKTVVTWN 404
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
++I G + G+++ A +F ++ ++ SWN MI Q EEA++L +M G++
Sbjct: 405 SLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKG 464
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
D + V + +AC L LD + Y + K+ D+ + ALV M+S+CG +++ F
Sbjct: 465 DRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVF 524
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
+ D+ +W I A A FD+M+ V+ D F++LL+ G +D
Sbjct: 525 ENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVD 584
Query: 411 ESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ LF M +G+ P+ HY C+VD++ RAG L+ A ++++
Sbjct: 585 QGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMK 627
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 171/364 (46%), Gaps = 33/364 (9%)
Query: 94 MPMKNVVSWNAMVAGCVQ---NDMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCD 148
M K V + N ++A CVQ ++ L+ A N F + Y N +I G+ G +
Sbjct: 55 MLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKE 114
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV-E 207
A ++ M ++ ++ D + L A + S V ++G+V +
Sbjct: 115 AIFIYLHM----IIVMGIVPDNFT----------FPFLLSACSKIMAFSEGVQVHGVVVK 160
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
GL K++ + ++I + GKVD +F ++ R++ SW +I GY
Sbjct: 161 MGLV------------KDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGY 208
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+ +EA+ LF +MV G++P+ + V +ACA L L+ G++ L+ + G S+
Sbjct: 209 SVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNT 268
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
V NAL+ MY KCG + F + S ++V +NTI++ + QH L + D+M+
Sbjct: 269 LVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQK 328
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G RPD +T LS ++ C + G + + + V G+ ++D+ + G+ +
Sbjct: 329 GQRPDKVTMLSTIAACAQLGDLSVGKS-SHAYVFRNGLERLDNISNAIIDMYMKCGKREA 387
Query: 448 ACEI 451
AC++
Sbjct: 388 ACKV 391
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 137/319 (42%), Gaps = 27/319 (8%)
Query: 1 MLSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVF 60
MLS+I L + H + VF D +N I + + G AA +VF
Sbjct: 337 MLSTIAACAQLGDLSVGKSSHAY---VFRNGLERLDNI-SNAIIDMYMKCGKREAACKVF 392
Query: 61 DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFN 120
D M K VVTWNS++ G + + +F MP N+VSWN M+ VQ M +EA +
Sbjct: 393 DSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAID 452
Query: 121 YFAAMPERNAASYNAMISGFIK----FGRLCDAQRLFKEMPCPNV----VSYTVMIDGYV 172
M + + G G L A+ ++ + ++ T ++D +
Sbjct: 453 LLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFS 512
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS--- 229
+ G A +F+ M +R+ +WT I G + A ELF M +++V A
Sbjct: 513 RC---GDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFV 569
Query: 230 -TAMITGFCKQGKVDEAWTLF---QQIR--CRDIASWNIMITGYAQNGRGEEALNLFSQM 283
A++T F G VD+ LF ++I I + M+ + G EEA +L M
Sbjct: 570 FVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSM 629
Query: 284 VRTGMQPDDLIFVSLFTAC 302
++P+D+I+ S AC
Sbjct: 630 ---PIKPNDVIWGSFLAAC 645
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 176/345 (51%), Gaps = 6/345 (1%)
Query: 115 LDEAFNYFAAMPER-NAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMID 169
D A N F MPE +I+ F K R DA LF M PN ++ +++
Sbjct: 109 FDVACNMFDEMPELLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLN 168
Query: 170 GYVKV-KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA 228
++ K G G N + +++ V+ EEA + F NVV+
Sbjct: 169 TSTRLGKVGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVS 228
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
T +I G+ K G+ ++A +F ++ R++ SWN M+ G ++ G EEA+ F M+R G
Sbjct: 229 YTTLIGGYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGF 288
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
P++ F +A +++A L GR +A IK + V N+L++ Y+KCGS+ DS L
Sbjct: 289 IPNESTFPCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLL 348
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGK 408
F + + ++VSWN +I +A + +A S F++M + G++P+ ++ L LL C AG
Sbjct: 349 IFDKICKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGL 408
Query: 409 IDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+DE FN + + EHYAC+VD+++R+G+ A IR
Sbjct: 409 VDEGFLYFNKARIESPNLLKPEHYACMVDLLARSGRFTEAQNFIR 453
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V+ + + + + +I A++ F+ +VV++ +++ Y SG + + +F+ MP
Sbjct: 194 NVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDALRVFNEMP 253
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMIS-----GFIKFGRL 146
+NV+SWNAMV GC + +EA +F M N +++ IS + FGR
Sbjct: 254 ERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIPNESTFPCAISAASNIASLGFGRS 313
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
A + K + N +I Y K G + + +FD + +RN VSW +I G
Sbjct: 314 FHACAI-KFLGKLNDFVGNSLISFYAKC---GSMKDSLLIFDKICKRNVVSWNAVICGYA 369
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGF---CKQ-GKVDEAWTLFQQIRCRDIASWNI 262
NG EA LF RM + + + + G C G VDE + F + R I S N+
Sbjct: 370 HNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKAR---IESPNL 426
Query: 263 --------MITGYAQNGRGEEALNLFSQM 283
M+ A++GR EA N +M
Sbjct: 427 LKPEHYACMVDLLARSGRFTEAQNFIRRM 455
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
K + + N I+ +++ G++ + +FDK+ ++VV+WN+++ Y H+G + +
Sbjct: 320 KFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVICGYAHNGRGAEAIS 379
Query: 90 LFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYF--AAMPERN---AASYNAMISGF 140
LF+ M + N VS ++ C ++DE F YF A + N Y M+
Sbjct: 380 LFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARIESPNLLKPEHYACMVDLL 439
Query: 141 IKFGRLCDAQRLFKEMP 157
+ GR +AQ + MP
Sbjct: 440 ARSGRFTEAQNFIRRMP 456
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 192/417 (46%), Gaps = 51/417 (12%)
Query: 85 QHSRALFDAMPMK-NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKF 143
Q+ +F P N +N M+ G V D + A + +A+M + A ++ F+
Sbjct: 54 QYPILVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASM-HKAAIVPDSFTFSFVL- 111
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK--------EGGGIARARALFDAMPRRNE 195
+ C LF + + + D V VK + G + A +FD M +N
Sbjct: 112 -KACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNV 170
Query: 196 VSWTVMINGLVENGLYEEAWELF------GRMPQ-------------------------- 223
VSWT MI G +E G + EA +LF G P
Sbjct: 171 VSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRC 230
Query: 224 -------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+NV +T+++ + K G ++EA +F + +DI W+ MI GYA NG EA
Sbjct: 231 MRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREA 290
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+ LF +M + ++PD V ++CASL L+ G L+ F S+ + +L+
Sbjct: 291 IELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDF 350
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y+KCGS+ ++ + + D V +N +I+ A + A F QM G+ P+ TF
Sbjct: 351 YAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTF 410
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ LL C AG +D+ + FN M HD+ + P EHY C+VD+++RAG L A +I+
Sbjct: 411 VGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIK 467
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 160/373 (42%), Gaps = 58/373 (15%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
DV +++ Y GF + + +FD M +KNVVSW M+ GC++ EA + F +
Sbjct: 138 DVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLL 197
Query: 127 ERNAASYNAMIS---------GFIKFGRLCDAQRLFKEMPCP-NVVSYTVMIDGYVKVKE 176
E +I G ++ GR D R +E NV T ++D Y K
Sbjct: 198 ESGLRPDGFVIVRVLRACARLGDLESGRWID--RCMRECGLSRNVFVATSLVDMYTKC-- 253
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV---------- 226
G + AR +FD M ++ V W+ MI G NGL EA ELF M + NV
Sbjct: 254 -GSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGA 312
Query: 227 -----------------------------VASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
V T++I + K G ++EA +++ ++ +D
Sbjct: 313 LSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDR 372
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+N +I+G A G+ A +F QM + G+ P++ FV L C L+D GR Y
Sbjct: 373 VVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRH-YFN 431
Query: 318 VIKHGFDSDLSVNN--ALVTMYSKCGSIVDSE-LAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ H F ++ + +V + ++ G + ++ L G + +++ W +++ H
Sbjct: 432 SMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRET 491
Query: 375 YKARSYFDQMIAV 387
A Q+I +
Sbjct: 492 QLAEHVLKQLIEL 504
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 61/311 (19%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +V+ A + +++ G++ AR VFD M KD+V W++M+ Y +G P+ + LF
Sbjct: 237 SRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFE 296
Query: 94 MPMKNV--------------VSWNAMVAG-----------CVQNDML------------- 115
M NV S A+ G + N +L
Sbjct: 297 MRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGS 356
Query: 116 -DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM-----PCPNVVSYTVMID 169
+EA + M E++ +NA+ISG +G++ A +F +M P PN ++ ++
Sbjct: 357 MEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIP-PNEHTFVGLLC 415
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTV-----MINGLVENGLYEEAWELFGRMPQK 224
G G + R F++M V+ T+ M++ L G +EA L MP K
Sbjct: 416 G---CTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMK 472
Query: 225 -NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN-----IMITGYAQNGRGEEALN 278
NV+ +++ G + A + +Q+ ++ WN ++ Y+ + R +EA
Sbjct: 473 ANVIVWGSLLGGCRLHRETQLAEHVLKQL--IELEPWNSGHYVLLSNIYSASRRWDEAEK 530
Query: 279 LFSQMVRTGMQ 289
+ S + GMQ
Sbjct: 531 IRSTVNEKGMQ 541
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 148/249 (59%), Gaps = 8/249 (3%)
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
G +A ++FG MP +N V I+G K G+++ A ++F ++ R + SW ++I GY
Sbjct: 163 GFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYT 222
Query: 269 QNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS-D 326
+ + +AL LF +M+ G++P+++ +++F A A L + + V K GF++ D
Sbjct: 223 RMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVD 282
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPD----IVSWNTIIAAFAQHVLYYKARSYFD 382
+ + NAL+ +Y+KCG I + F + PD VSWN++++ +A + +A F+
Sbjct: 283 IRIVNALIDLYAKCGCIESASGLFSE--MPDWRRNSVSWNSVMSGYATFGMVREAVDTFE 340
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M GVRP+ + FLS+LS C +G ++E + F MV+DYG+ P +HY C++D++ RA
Sbjct: 341 KMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLGRA 400
Query: 443 GQLQRACEI 451
G+L A ++
Sbjct: 401 GRLGEAEKV 409
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 143/273 (52%), Gaps = 20/273 (7%)
Query: 115 LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV 174
L +A F MP+RN ++N ISG IK+G+L A+ +F M +VVS+T++IDGY ++
Sbjct: 165 LVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRM 224
Query: 175 KEGGGIARARALFDAM-----PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----- 224
+ +A ALF M NEV+ + + G + + G + ++
Sbjct: 225 NKP---LKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAV 281
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIR--CRDIASWNIMITGYAQNGRGEEALNLFSQ 282
++ A+I + K G ++ A LF ++ R+ SWN +++GYA G EA++ F +
Sbjct: 282 DIRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEK 341
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCG 341
M + G++P+ + F+S+ +AC+ L+++G + + +V +G D+ ++ M + G
Sbjct: 342 MEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLGRAG 401
Query: 342 SIVDSE---LAFGQTSQPDIVSWNTIIAAFAQH 371
+ ++E L + D++ W T++ A + H
Sbjct: 402 RLGEAEKVALEVPHEAANDVI-WRTLLGACSVH 433
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 147/326 (45%), Gaps = 35/326 (10%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
+S G + A QVF +MP ++ VTWN ++ G + +R++FD M +++VVSW ++
Sbjct: 159 YSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVI 218
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYN--AMISGFIKFGRL-----CDAQRLFKEMPCP 159
G + + +A F M E + N +++ F L C++ + E
Sbjct: 219 DGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGF 278
Query: 160 NVVSYTV---MIDGYVKVKEGGGIARARALFDAMP--RRNEVSWTVMINGLVENGLYEEA 214
N V + +ID Y K G I A LF MP RRN VSW +++G G+ EA
Sbjct: 279 NAVDIRIVNALIDLYAKC---GCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREA 335
Query: 215 WELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQI-----RCRDIASWNIMIT 265
+ F +M + V VA ++++ G V+E F ++ DI + +I
Sbjct: 336 VDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVID 395
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK----H 321
+ GR EA + ++ +D+I+ +L AC+ ++ G++ +++ H
Sbjct: 396 MLGRAGRLGEAEKVALEVPHEA--ANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEKGH 453
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSE 347
G D L N +++ G D E
Sbjct: 454 GGDYVLMSN-----IFASVGRFKDVE 474
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRT---GMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+N +I Y+ + E+L F+ + + D L ACA+L G +
Sbjct: 79 FNNLIRSYSLSLFPHESLKFFTHTLNNLTHSLSLDSFTLTFLAHACANLDTTHFGFHLHC 138
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
+V K GF++ + V L+ MYS G +VD+ FG+ + V+WN I+ +
Sbjct: 139 IVCKMGFENHVFVQTGLLHMYSNWGFLVDAAQVFGEMPDRNTVTWNVFISGLIKWGQLEF 198
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
ARS FD+M+ V +++ ++ R K +++ LF M+ GI P +
Sbjct: 199 ARSVFDRMVVRSV----VSWTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVF 254
Query: 437 DVMSRAGQLQRACEIIR 453
++ G + + CE +
Sbjct: 255 PAIAHLGNV-KMCESVH 270
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 134/228 (58%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
++V+ + ++ K G++D A +F + RD+ SW IM++ Y++ R E L+LF +M
Sbjct: 174 DIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMR 233
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
G+ PD++ +S+ +ACA L + GR + V ++GF +++ N+L+ MY KCG +
Sbjct: 234 LAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLE 293
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
++ F +T + +++WN ++ A H A F+ MI GV PDG+T L+LL
Sbjct: 294 EAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYA 353
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
G +DE + LF M DYG+ PR EHY +VD++ R+G+LQ A ++
Sbjct: 354 HKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLL 401
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 186/434 (42%), Gaps = 63/434 (14%)
Query: 42 LNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV- 100
AA S G+++ A +FD+MP +N+++ A+ HS P S F+ M ++
Sbjct: 46 FRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAP 105
Query: 101 ---SWNAMVAG-----CVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL 152
S+ ++ + +D+ F + R+ NA+I + G A+++
Sbjct: 106 DEFSFTFLLKSRSFTMPLVHDIHGAVFKFGFC---RHLHVQNALIHLYAVGGVTISARKV 162
Query: 153 FKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
F++ ++VS++ ++ + K E + AR +FD MP R+ VSWT+M++ +
Sbjct: 163 FEDAVRVGLDVDIVSWSGLLVAHAKAGE---LDVARKVFDGMPERDVVSWTIMLSAYSKA 219
Query: 209 GLYEEAWELF------------------------------GRMPQK---------NVVAS 229
E +LF GRM K V
Sbjct: 220 KRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALC 279
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
++I + K G ++EAW +F + + + + +WN M+ A +G E+A LF M+ +G+
Sbjct: 280 NSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVV 339
Query: 290 PDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
PD + ++L A A +D+G + + ++ +G + + A+V M + G + ++
Sbjct: 340 PDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYN 399
Query: 349 AFGQTSQP-DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD-GITFLSLLSVCCRA 406
P + V W ++ A H +++ ++PD G ++ L + A
Sbjct: 400 LLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLE--LKPDEGGYYILLRDIYVAA 457
Query: 407 GKIDESMNLFNLMV 420
G+ E+ + M+
Sbjct: 458 GRTAEANEMRQAML 471
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 98/245 (40%), Gaps = 34/245 (13%)
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL- 298
G + A +F Q+ +N +I ++ + + F++M R + PD+ F L
Sbjct: 55 GDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLL 114
Query: 299 -------------------FTACASLALLD-------------QGRQTYALVIKHGFDSD 326
F C L + + R+ + ++ G D D
Sbjct: 115 KSRSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVD 174
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ + L+ ++K G + + F + D+VSW +++A+++ ++ F +M
Sbjct: 175 IVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRL 234
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
GV PD +T LS++S C G E + + V + G L+D+ + G L+
Sbjct: 235 AGVWPDEVTVLSVISACAELGDA-EMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLE 293
Query: 447 RACEI 451
A ++
Sbjct: 294 EAWQV 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV- 99
N I + + G + A QVFD+ K ++TWN+M+ + G+ + + LF+ M V
Sbjct: 280 NSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVV 339
Query: 100 ---VSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGRLCDAQR 151
V+ A++ +DE F +M E Y A++ + GRL +A
Sbjct: 340 PDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYN 399
Query: 152 LFKEMPCPN 160
L MP P+
Sbjct: 400 LLTSMPIPS 408
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 134/228 (58%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
++V+ + ++ K G++D A +F + RD+ SW IM++ Y++ R E L+LF +M
Sbjct: 174 DIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMR 233
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
G+ PD++ +S+ +ACA L + GR + V ++GF +++ N+L+ MY KCG +
Sbjct: 234 LAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLE 293
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
++ F +T + +++WN ++ A H A F+ MI GV PDG+T L+LL
Sbjct: 294 EAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYA 353
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
G +DE + LF M DYG+ PR EHY +VD++ R+G+LQ A ++
Sbjct: 354 HKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLL 401
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 186/434 (42%), Gaps = 63/434 (14%)
Query: 42 LNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV- 100
AA S G+++ A +FD+MP +N+++ A+ HS P S F+ M ++
Sbjct: 46 FRFAAVSPFGDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAP 105
Query: 101 ---SWNAMVAG-----CVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL 152
S+ ++ + +D+ F + R+ NA+I + G A+++
Sbjct: 106 DEFSFTFLLKSRSFTMPLVHDIHGAVFKFGFC---RHLHVQNALIHLYAVGGVTISARKV 162
Query: 153 FKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
F++ ++VS++ ++ + K E + AR +FD MP R+ VSWT+M++ +
Sbjct: 163 FEDAVRVGLDVDIVSWSGLLVAHAKAGE---LDVARKVFDGMPERDVVSWTIMLSAYSKA 219
Query: 209 GLYEEAWELF------------------------------GRMPQK---------NVVAS 229
E +LF GRM K V
Sbjct: 220 KRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALC 279
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
++I + K G ++EAW +F + + + + +WN M+ A +G E+A LF M+ +G+
Sbjct: 280 NSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVV 339
Query: 290 PDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
PD + ++L A A +D+G + + ++ +G + + A+V M + G + ++
Sbjct: 340 PDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYN 399
Query: 349 AFGQTSQP-DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD-GITFLSLLSVCCRA 406
P + V W ++ A H +++ ++PD G ++ L + A
Sbjct: 400 LLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLE--LKPDEGGYYILLRDIYVAA 457
Query: 407 GKIDESMNLFNLMV 420
G+ E+ + M+
Sbjct: 458 GRTAEANEMRQAML 471
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 98/245 (40%), Gaps = 34/245 (13%)
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL- 298
G + A +F Q+ +N +I ++ + + F++M R + PD+ F L
Sbjct: 55 GDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLL 114
Query: 299 -------------------FTACASLALLD-------------QGRQTYALVIKHGFDSD 326
F C L + + R+ + ++ G D D
Sbjct: 115 KSRSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVD 174
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ + L+ ++K G + + F + D+VSW +++A+++ ++ F +M
Sbjct: 175 IVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRL 234
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
GV PD +T LS++S C G E + + V + G L+D+ + G L+
Sbjct: 235 AGVWPDEVTVLSVISACAELGDA-EMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLE 293
Query: 447 RACEI 451
A ++
Sbjct: 294 EAWQV 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV- 99
N I + + G + A QVFD+ K ++TWN+M+ + G+ + + LF+ M V
Sbjct: 280 NSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSGVV 339
Query: 100 ---VSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGRLCDAQR 151
V+ A++ +DE F +M E Y A++ + GRL +A
Sbjct: 340 PDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYN 399
Query: 152 LFKEMPCPN 160
L MP P+
Sbjct: 400 LLTSMPIPS 408
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 146/257 (56%), Gaps = 2/257 (0%)
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
T +++ + G + A +F M K + AM+ G + G ++ A LF + R++
Sbjct: 118 TALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVV 177
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVR-TGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SW M++GY QN + E+AL LF +M R + P+++ S+ ACA+L L+ G++
Sbjct: 178 SWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVY 237
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ-PDIVSWNTIIAAFAQHVLYYK 376
K+GF +L V NA++ MY+KCG I + F + + ++ SWN++I A H +K
Sbjct: 238 ARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHK 297
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
A +DQM+ G PD +TF+ LL C G +++ ++F M D+ I P+ EHY C+V
Sbjct: 298 AIQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMV 357
Query: 437 DVMSRAGQLQRACEIIR 453
D++ RAG+L A E+I+
Sbjct: 358 DLLGRAGRLTEAYEVIK 374
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 132/280 (47%), Gaps = 46/280 (16%)
Query: 135 AMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN 194
A++ + K G L A+ +F EM + ++ M+ G + G + RA LF MP RN
Sbjct: 119 ALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRF---GDMERALELFWLMPSRN 175
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQ------------------------------- 223
VSWT M++G ++N YE+A LF RM +
Sbjct: 176 VVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVE 235
Query: 224 ---------KNVVASTAMITGFCKQGKVDEAWTLFQQI-RCRDIASWNIMITGYAQNGRG 273
KN+ A++ + K GK+D AW +F +I R R++ SWN MI G A +G+
Sbjct: 236 VYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQC 295
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNA 332
+A+ L+ QM+R G PDD+ FV L AC ++++G+ + ++ L
Sbjct: 296 HKAIQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGC 355
Query: 333 LVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+V + + G + ++ E+ +PD V W T++ A + H
Sbjct: 356 MVDLLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFH 395
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 136/307 (44%), Gaps = 39/307 (12%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
HT F+ KH DV+ + + +++ G + AR VFD+M K++ TWN+M+
Sbjct: 102 HTQFMKSGFKH----DVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTR 157
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN-----A 135
G + + LF MP +NVVSW MV+G +QN ++A F M S N +
Sbjct: 158 FGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLAS 217
Query: 136 MISGFIKFGRLCDAQRL---------FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARAL 186
++ G L QR+ FK + N V ++ Y K G I A +
Sbjct: 218 VLPACANLGALEIGQRVEVYARKNGFFKNLFVCNAV-----LEMYAKC---GKIDVAWKV 269
Query: 187 FDAMPR-RNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF---CKQGKV 242
FD + R RN SW MI GL +G +A +L+ +M ++ + G C G +
Sbjct: 270 FDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDVTFVGLLLACTHGGM 329
Query: 243 DEAWTLFQQIRCRD------IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
E Q RD + + M+ + GR EA + +M M+PD +I+
Sbjct: 330 VEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEAYEVIKRM---PMKPDSVIWG 386
Query: 297 SLFTACA 303
+L AC+
Sbjct: 387 TLLGACS 393
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
+ L+SQM G P+ F LFT C SL+ L G+ + +K GF D+ + AL
Sbjct: 61 HQCFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTAL 120
Query: 334 VTMYSKCG------SIVDS----ELA-----------FGQTSQP----------DIVSWN 362
+ MY+K G ++ D ELA FG + ++VSW
Sbjct: 121 LDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWT 180
Query: 363 TIIAAFAQHVLYYKARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKID 410
T+++ + Q+ Y KA F +M V P+ +T S+L C G ++
Sbjct: 181 TMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALE 229
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 127/228 (55%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+VV +M+ G ++G+V +A +F ++ RD+ SW+ MI GY QNG+ E+ L F M
Sbjct: 179 DVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMR 238
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
G++P++ I V++ +A A L LL GR ++ + F +++ LV MY+KCG I
Sbjct: 239 EKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCIE 298
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
+S F + DI +W +I A H +A F + I G RP + F+ +L+ C
Sbjct: 299 ESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNACS 358
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
RAG + E F LMV YGI P EHY C+VD+ +RAG + A +I
Sbjct: 359 RAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLI 406
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 151/316 (47%), Gaps = 48/316 (15%)
Query: 149 AQRLFKEMP---CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
A+R+F+E C +VV++ M+ G V+ G + A +FD MP+R+ VSW+ MI G
Sbjct: 165 AKRVFEEEVDEVCSDVVTWNSMLAGLVR---KGEVRDAEKMFDEMPKRDVVSWSSMIMGY 221
Query: 206 VENGLYEEAWELFGRMPQK---------------------------------------NV 226
V+NG E+ E F M +K +V
Sbjct: 222 VQNGKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISV 281
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT 286
T ++ + K G ++E+ LF + RDI +W +MI G A + R +EAL LF + +R
Sbjct: 282 AIGTGLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIRE 341
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVD 345
G +P ++IFV + AC+ L+ +GR + L++ +G ++ +V ++++ G I +
Sbjct: 342 GFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDE 401
Query: 346 S-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
+ L T +PD V W T++ A H +++I + DG ++ L +
Sbjct: 402 AVRLIETMTVEPDPVMWATLLDACEIHGFVEMGEKIGNKLIKMDPTHDG-HYVQLAGIYA 460
Query: 405 RAGKIDESMNLFNLMV 420
++ K D+ + + LMV
Sbjct: 461 KSRKWDDVVRVRRLMV 476
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 133/285 (46%), Gaps = 26/285 (9%)
Query: 56 ARQVFDKMPTK---DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQN 112
A++VF++ + DVVTWNSML G + + +FD MP ++VVSW++M+ G VQN
Sbjct: 165 AKRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQN 224
Query: 113 DMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSY 164
L++ F M E+ N + M+S + G L + + + +V
Sbjct: 225 GKLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIG 284
Query: 165 TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK 224
T ++D Y K G I +R LFD M R+ +WTVMI GL + +EA LF ++
Sbjct: 285 TGLVDMYAKC---GCIEESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIRE 341
Query: 225 NVVASTAMITGF----CKQGKVDEAWTLFQQIR-----CRDIASWNIMITGYAQNGRGEE 275
+ G + G V E F+ + ++ + M+ +A+ G +E
Sbjct: 342 GFRPVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDE 401
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
A+ L M ++PD +++ +L AC ++ G + +IK
Sbjct: 402 AVRLIETMT---VEPDPVMWATLLDACEIHGFVEMGEKIGNKLIK 443
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 197/445 (44%), Gaps = 67/445 (15%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYF---- 122
+++ NS++ Y + +R LFD M +++VVS+N ++ G + + E F
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 123 AAMPERNAASYNAMISGFIKFGRLCDAQR----LFK---------EMPCPNVVSYTVMID 169
+++ + N + ++S GR+ + + LFK + ++ S +D
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173
Query: 170 GYVKV--KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV 227
++V E G I F + ++N LVE+G EA E+ GRM + VV
Sbjct: 174 LALQVLESEHGNIDNDNDAF---------CYNSVLNALVESGRLGEAVEVLGRMVDEGVV 224
Query: 228 ---ASTAMITGFCKQ------------------------------------GKVDEAWTL 248
+ + G C Q G V A +
Sbjct: 225 WDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKV 284
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F ++ R++ W ++T Y QNG EE LNL S M R G ++ F L A A +A L
Sbjct: 285 FDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAAL 344
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
G +A V K G + + V NAL+ MYSKCG I S F DI++WN +I +
Sbjct: 345 RHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGY 404
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
+QH L +A F M++ G P+ +TF+ +LS C ++E N ++ + + P
Sbjct: 405 SQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPG 464
Query: 429 SEHYACLVDVMSRAGQLQRACEIIR 453
EHY C+V V+ RAG L+ A +R
Sbjct: 465 LEHYTCVVAVLCRAGMLEEAENFMR 489
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/465 (21%), Positives = 185/465 (39%), Gaps = 123/465 (26%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
+ +++ + N I + + + AR +FD+M + VV++N ++ Y HSG LF
Sbjct: 50 YREFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLF 109
Query: 92 DAMP----MKNVVSWNAMVAGCVQNDMLDEA-------------FNYFAAMP-------- 126
M N + +++ C + + E F++F
Sbjct: 110 KNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKC 169
Query: 127 -------------------ERNAASYNAMISGFIKFGRLCDAQRLFKEMP---------- 157
+ +A YN++++ ++ GRL +A + M
Sbjct: 170 FHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVT 229
Query: 158 -------CPNVVSYTVMIDGYVKVKEGG-------------------GIARARALFDAMP 191
C + + + + ++ +GG + AR +FD +
Sbjct: 230 YVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQ 289
Query: 192 RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKN-------------------------- 225
RN V WT ++ ++NG +EE L M ++
Sbjct: 290 NRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDL 349
Query: 226 -------------VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGR 272
V+ A+I + K G +D ++ +F +R RDI +WN MI GY+Q+G
Sbjct: 350 LHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGL 409
Query: 273 GEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH-GFDSDLSVNN 331
G++AL LF M+ G P+ + FV + +ACA LAL+++G ++KH + L
Sbjct: 410 GKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYT 469
Query: 332 ALVTMYSKCGSIVDSELAFGQTSQP--DIVSWNTIIAAFAQHVLY 374
+V + + G + ++E F +T+Q D+V+W ++ A H Y
Sbjct: 470 CVVAVLCRAGMLEEAE-NFMRTTQVKWDVVAWRVLLNACNIHRNY 513
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 151/327 (46%), Gaps = 11/327 (3%)
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA-RA 185
E N N++I+ ++K +L A+ LF EM +VVSY V++ GY+ E + + +
Sbjct: 52 EFNIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKN 111
Query: 186 LFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV----ASTAMITGFCKQGK 241
+ ++ + NE +T +++ +G E + G + + +V ++++ + K
Sbjct: 112 MVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFH 171
Query: 242 VDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
VD A + + D +N ++ ++GR EA+ + +MV G+ D + +V
Sbjct: 172 VDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYV 231
Query: 297 SLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP 356
S+ C + L G Q +A ++K G D+ V + LV M+ KCG ++ + F
Sbjct: 232 SVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNR 291
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
++V W +++ A+ Q+ + + + M G + TF LL+ + +L
Sbjct: 292 NVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHG-DLL 350
Query: 417 NLMVHDYGIPPRSEHYACLVDVMSRAG 443
+ V GI R L+++ S+ G
Sbjct: 351 HARVEKLGIKNRVIVGNALINMYSKCG 377
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 201/426 (47%), Gaps = 63/426 (14%)
Query: 88 RALFDAMPMK-NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIK 142
R++F K +V SWN+++A ++ +A F++M + N +++ I
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 143 FGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSW 198
LC +++ ++ ++ + +ID Y K G + AR LFD +P RN VSW
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKC---GYLNDARKLFDEIPERNVVSW 155
Query: 199 TVMINGLVENGLYEEAWELF---------------------------------GRMPQKN 225
T MI+G V+N EA LF R+ K+
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215
Query: 226 VV-----------------ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
V ++ + K G++ + +F + D+ SWN +I YA
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275
Query: 269 QNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
QNG EA +LFS MV+ G ++ + + ++ ACA L G+ + V+K + +L
Sbjct: 276 QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNL 335
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
V ++V MY KCG + + AF + + ++ SW ++A + H +A F +MI
Sbjct: 336 VVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRC 395
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G++P+ ITF+S+L+ C AG + E + FN M ++ + P EHY+C+VD++ RAG L+
Sbjct: 396 GIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKE 455
Query: 448 ACEIIR 453
A +I+
Sbjct: 456 AYGLIQ 461
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 201/426 (47%), Gaps = 63/426 (14%)
Query: 88 RALFDAMPMK-NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIK 142
R++F K +V SWN+++A ++ +A F++M + N +++ I
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 143 FGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSW 198
LC +++ ++ ++ + +ID Y K G + AR LFD +P RN VSW
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKC---GYLNDARKLFDEIPERNVVSW 155
Query: 199 TVMINGLVENGLYEEAWELF---------------------------------GRMPQKN 225
T MI+G V+N EA LF R+ K+
Sbjct: 156 TSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKS 215
Query: 226 VV-----------------ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
V ++ + K G++ + +F + D+ SWN +I YA
Sbjct: 216 VTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYA 275
Query: 269 QNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
QNG EA +LFS MV+ G ++ + + ++ ACA L G+ + V+K + +L
Sbjct: 276 QNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNL 335
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
V ++V MY KCG + + AF + + ++ SW ++A + H +A F +MI
Sbjct: 336 VVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRC 395
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G++P+ ITF+S+L+ C AG + E + FN M ++ + P EHY+C+VD++ RAG L+
Sbjct: 396 GIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKE 455
Query: 448 ACEIIR 453
A +I+
Sbjct: 456 AYGLIQ 461
>Medtr3g077200.1 | PPR containing plant-like protein | HC |
chr3:34651569-34656476 | 20130731
Length = 553
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 220/436 (50%), Gaps = 29/436 (6%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S D + A I ++ +I A VFDK T+ V WNSM+ A+ + ++ +LF
Sbjct: 35 SKDPFYATQIIRLYAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKARRFSNAISLFRT 94
Query: 94 MPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----------SYNAMISGFIKF 143
M + ++ N A ++ ++F++ +A +A++S + K
Sbjct: 95 MLVDDIRPDNYTYACAIR--ACADSFDFGMLRVVHGSAVSVGLGLDPICCSALVSAYSKL 152
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG------GIARARALFDAMPRRNEVS 197
G + +A+R+F + P++V + +I Y GG GI ++ A + + +
Sbjct: 153 GVVHEARRVFDGIVEPDLVLWNSLISAY-----GGSGMWEIGIQMFSSMRLAGKKPDGFT 207
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNVVAS-----TAMITGFCKQGKVDEAWTLFQQI 252
++ G+ ++ L EL G + QK+ + S + +++ + + +D A+ +F I
Sbjct: 208 LAGLLGGIADSSLLSIGQELHG-LSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGI 266
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
D+ +W+ +I+GY+Q G ++AL F ++ + D ++ ++ + +A + G
Sbjct: 267 FNPDLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATVLASITQMANVLPGC 326
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
+ + V++HG +SD+ V++AL+ MYSKCG + F + +I+S+N++I A+ H
Sbjct: 327 EIHGYVLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRIMLERNIISYNSMILAYGLHG 386
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY 432
+A + FD+M+ G+ PD TF +LLS CC AG + + LF M ++ I R EHY
Sbjct: 387 CASQAFTMFDEMLQKGLVPDEGTFSALLSACCHAGLVKDGRELFWRMKDEFNIKARPEHY 446
Query: 433 ACLVDVMSRAGQLQRA 448
+V ++ G+L+ A
Sbjct: 447 VYMVKLLGGVGELEEA 462
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 219/468 (46%), Gaps = 57/468 (12%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD- 92
S DV N ++ + + G A +F M +D+V+WN+++ Y +G S +F
Sbjct: 284 SADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGN 343
Query: 93 ----AMPMKNVVSWNAMVAGCVQNDMLD---EAFNYFAAMPE--RNAASYNAMISGFIKF 143
M + + V+ +++ C Q D L + Y P + ++ NA++S + K
Sbjct: 344 LVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKC 403
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGY-------------------------------- 171
G + +A F + +++S+ ++D +
Sbjct: 404 GYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTII 463
Query: 172 ---------VKVKEGGGIA-RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM 221
KVKE G + R+ +L A +++ + G E A ++F +
Sbjct: 464 HFCASLLRVKKVKEIHGYSIRSGSLLCATA---PTVGNAILDAYSKCGNIEYANKMFQNL 520
Query: 222 PQK-NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
+K N+V ++I+G+ G +A +F + D+ +WN+M+ YA+N E+AL LF
Sbjct: 521 SEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELF 580
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
++ GM+PD + +SL C +A + RQ + +I+ F+ DL + L+ Y+KC
Sbjct: 581 LKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-DLHLKGTLLDAYAKC 639
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
G I + F + D+V + +I +A H + KA F M+ +G++PD + F S+L
Sbjct: 640 GIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSIL 699
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
S C AG+I E + +F+ + +G+ P E +AC+VD+++R G + A
Sbjct: 700 SACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEA 747
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 226/470 (48%), Gaps = 52/470 (11%)
Query: 16 SSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSML 75
S+ + H +V H S + +A LN+ +++ G + ++FD+ D V WN +L
Sbjct: 59 SNLGKCLHSYVVKQGHVSCHVTSKALLNM--YAKCGMLDDCHKLFDQFGRCDPVIWNIVL 116
Query: 76 TAYWHSGFPQHS-RALFDAMP-----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP--- 126
+ Y SG +F AM M + V+ ++ C ++ L+ + +
Sbjct: 117 SGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSG 176
Query: 127 -ERNAASYNAMISGFIKFGRL-CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
E + + NA++S + K G + CDA +F + +VVS+ MI G + E G + A
Sbjct: 177 FEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAG---LAENGLLKEAF 233
Query: 185 ALFDAMPRRN-EVSWTVMINGLV------ENGLYEEAWELFGRMPQ-----KNVVASTAM 232
+LF M + + + ++ + N L EN + ++ + Q +V A+
Sbjct: 234 SLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNAL 293
Query: 233 ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM-QPD 291
++ + K G+ EA +LF + RD+ SWN +I GYA NG ++L++F +V M D
Sbjct: 294 LSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLD 353
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFD-SDLSVNNALVTMYSKCGSIVDSELAF 350
+ VS+ ACA L L G+Q +A +++H F D S NALV+ Y+KCG I ++ F
Sbjct: 354 SVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTF 413
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC---RAG 407
S+ D++SWN+I+ AF + + + S M+ + +RPD +T L+++ C R
Sbjct: 414 SMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVK 473
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYAC---------LVDVMSRAGQLQRA 448
K+ E +H Y I RS C ++D S+ G ++ A
Sbjct: 474 KVKE--------IHGYSI--RSGSLLCATAPTVGNAILDAYSKCGNIEYA 513
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 217/500 (43%), Gaps = 96/500 (19%)
Query: 5 IIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAF----SRAGNITAARQVF 60
+I +I L S + VF SS +V +++ IA +R+GN+ + V
Sbjct: 110 VIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVH 169
Query: 61 DKMPTK----DVVTWNSMLTAYWHSGFPQ-HSRALFDAMPMKNVVSWNAMVAGCVQNDML 115
+ D N++++ Y G + A+FD++ K+VVSWNAM+AG +N +L
Sbjct: 170 GYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLL 229
Query: 116 DEAFNYFAAM-----------------------------------------PERNA--AS 132
EAF+ F+ M PE +A +
Sbjct: 230 KEAFSLFSLMMKGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSV 289
Query: 133 YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE--------GGGIARAR 184
NA++S ++K GR +A+ LF M ++VS+ +I GY E G ++
Sbjct: 290 CNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEM 349
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDE 244
L D++ + + ++ L + G A+ L ++ A A+++ + K G ++E
Sbjct: 350 LLLDSVTMVSILPACAQLDNL-QAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEE 408
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A+ F I +D+ SWN ++ + + L+L M++ ++PD + +++ CAS
Sbjct: 409 AYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCAS 468
Query: 305 LALLDQGRQTYALVIKHG---FDSDLSVNNALVTMYSKCGSI------------------ 343
L + + ++ + I+ G + +V NA++ YSKCG+I
Sbjct: 469 LLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVT 528
Query: 344 --------------VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV 389
D+ + F S+ D+ +WN ++ +A++ +A F ++ G+
Sbjct: 529 CNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGM 588
Query: 390 RPDGITFLSLLSVCCRAGKI 409
+PD +T +SL+ VC + +
Sbjct: 589 KPDVVTIMSLIPVCTQMASV 608
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVR--TGMQPDDLIFVSLFTACASLALLDQGR 312
R+ +W I + R EAL+ F ++ +PD + ++ +C++L + G+
Sbjct: 4 RNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGK 63
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
++ V+K G S + AL+ MY+KCG + D F Q + D V WN +++ +++
Sbjct: 64 CLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSG 123
Query: 373 LY-YKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAGKID 410
F M + G V P +T ++L VC R+G ++
Sbjct: 124 KNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLN 163
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 124/292 (42%), Gaps = 27/292 (9%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTK-DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKN 98
N + A+S+ GNI A ++F + K ++VT NS+++ Y G + +F M +
Sbjct: 497 GNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETD 556
Query: 99 VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
+ +WN MV +ND ++A F + + I I + L ++ C
Sbjct: 557 LTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQ--C 614
Query: 159 PNVVSYT---------VMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENG 209
+ + ++D Y K G I A +F + ++ V +T MI G +G
Sbjct: 615 HGYIIRSSFEDLHLKGTLLDAYAKC---GIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHG 671
Query: 210 LYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIR-----CRDIASW 260
+ E+A E F M + V T++++ G++ E +F I I +
Sbjct: 672 MSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQF 731
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
++ A+ G EA +S + + ++ + I+ +L AC + ++ GR
Sbjct: 732 ACVVDLLARGGHVSEA---YSFVTKIPIEANANIWGTLLGACKTYHEVELGR 780
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/438 (26%), Positives = 206/438 (47%), Gaps = 55/438 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SWNAMVAGCVQNDMLDEAFNYF 122
D + WN +++ Y + + + +++ M K V+ ++ +++ C + D
Sbjct: 157 DPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVH 216
Query: 123 AAMPERNAA----SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG 178
A+ E + +NA++ + +FG+L A+ LF MP + VS+ MI Y G
Sbjct: 217 KAIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYA---SRG 273
Query: 179 GIARARALFDAMPR----RNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMIT 234
A LF M RN + W + G + G ++ A +LF +M + S AM+
Sbjct: 274 LWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVV 333
Query: 235 GF--------CKQGK------------------------------VDEAWTLFQQIRCRD 256
G K GK ++ A+ LF++I +
Sbjct: 334 GLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKG 393
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ +WN M++G+A R EE L +M+R G++P+ + S+ CA +A L G++ +
Sbjct: 394 LITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHC 453
Query: 317 LVIK--HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
++K F L + N+LV MYS+ G ++++ F S+ D V++ ++I +
Sbjct: 454 YMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDG 513
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
A F +M + ++PD +T +++L C +G + + LF M+ YGI PR EHY+C
Sbjct: 514 ETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSC 573
Query: 435 LVDVMSRAGQLQRACEII 452
+VD+ RAG L +A E+I
Sbjct: 574 MVDLFGRAGLLDKAKEVI 591
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 292 DLIF---VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
D+IF L C +L L QG+Q +A +I G + + + L+ Y+ + D+++
Sbjct: 89 DIIFQPIKHLLLGCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQI 148
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
++ D + WN +I+ + ++ L+ A S + +M++ GV PD T+ S+L C
Sbjct: 149 VAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKAC 203
>Medtr4g006900.1 | PPR containing plant-like protein | HC |
chr4:850780-853131 | 20130731
Length = 688
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 214/496 (43%), Gaps = 86/496 (17%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFD 61
SS+I S A P + TH LL+ S D+ R L I + + G + AR+VF+
Sbjct: 220 FSSVIKSFAAAPAFYQGLK-THALLIKNGLVDS-DILRTCL-IDLYFKCGKVKLARRVFE 276
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
++P ++ ++VV W M++G N + E Y
Sbjct: 277 EIPERE-----------------------------RDVVVWGTMLSGFSHNRLQREVLEY 307
Query: 122 FAAMPERNAASYNAMISGFIK-FGRLCDAQRLFKEMPC---------PNVVSYTVMIDGY 171
M E + +++ + G +C +RL +E+ V + +ID Y
Sbjct: 308 VKWMVEEGIYPNSVIMTIVLPVIGEVCK-RRLGQEVHAFVLKTKSYAEKVPVQSALIDMY 366
Query: 172 VKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------- 224
K G ++ ARA+F + P RN V WT +++G G E+A M Q+
Sbjct: 367 CKC---GDLSSARAVFYSSPERNVVCWTALMSGYASVGRLEQALRAVIWMQQEGFRPDVV 423
Query: 225 --------------------------------NVVASTAMITGFCKQGKVDEAWTLFQQI 252
NV S++++ + K G V+ + LF +
Sbjct: 424 TVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGVVEYSTRLFGDM 483
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
R++ SW MI Y +NG EAL + M + +PD + + + C L LL G+
Sbjct: 484 EQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRMLSVCGELKLLKHGK 543
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
+ + ++K F S V+ L+ MY G + + L F ++W +I A+ +
Sbjct: 544 EIHGQILKRDFTSVHFVSAELINMYGALGDVDKANLVFSAVPVKGSMTWTALIRAYEYNE 603
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY 432
LY A FDQM + P+ TF +LSVC RAG ++++ +FNLM Y I EH+
Sbjct: 604 LYQGAIDLFDQMRSDRFSPNPFTFEVILSVCERAGFVNDASKIFNLM-PKYKIEASKEHF 662
Query: 433 ACLVDVMSRAGQLQRA 448
A +V +++R GQL++A
Sbjct: 663 AIMVRLLTRYGQLEKA 678
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 183/419 (43%), Gaps = 62/419 (14%)
Query: 44 IAAFSRAGNITAARQVFDKMP----TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKN- 98
IAA R +++ +Q+ + K+ ++ Y G + + LFD +P ++
Sbjct: 118 IAACIRTNSLSIGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELPDESS 177
Query: 99 VVSWNAMVAGCV-----QNDMLDEAFNYFAAMP---ERNAASYNAMISGFIK----FGRL 146
V WNA++ G V + +D Y E N S++++I F + L
Sbjct: 178 VYPWNALLRGTVVFGGRKKQYIDVVKTYSKMRELGVELNVYSFSSVIKSFAAAPAFYQGL 237
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE--VSWTVMING 204
L K + + T +ID Y K G + AR +F+ +P R V W M++G
Sbjct: 238 KTHALLIKNGLVDSDILRTCLIDLYFKC---GKVKLARRVFEEIPERERDVVVWGTMLSG 294
Query: 205 ----------------LVENGLYE------------------------EAWELFGRMPQK 224
+VE G+Y A+ L + +
Sbjct: 295 FSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKSYAE 354
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
V +A+I +CK G + A +F R++ W +++GYA GR E+AL M
Sbjct: 355 KVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVCWTALMSGYASVGRLEQALRAVIWMQ 414
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
+ G +PD + ++ CA L L+QG+Q +A +KH F ++S++++LV MYSKCG +
Sbjct: 415 QEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYSKCGVVE 474
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
S FG Q +++SW +I ++ ++ Y+A M RPD + +LSVC
Sbjct: 475 YSTRLFGDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRMLSVC 533
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I +A+ + EAL + + + G+ + F SL AC L G+Q + + +G
Sbjct: 83 IKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACIRTNSLSIGKQIHTHIRINGL 142
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQ-TSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
+ + + LV MY+ CGS+ D+ F + + + WN ++ V + + Y D
Sbjct: 143 EKNTFLLTKLVQMYTSCGSLEDALKLFDELPDESSVYPWNALLRGTV--VFGGRKKQYID 200
Query: 383 ------QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
+M +GV + +F S++ A + + L++ + G+ CL+
Sbjct: 201 VVKTYSKMRELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKN-GLVDSDILRTCLI 259
Query: 437 DVMSRAGQLQRA 448
D+ + G+++ A
Sbjct: 260 DLYFKCGKVKLA 271
>Medtr3g088820.1 | PPR containing plant-like protein | HC |
chr3:40646143-40648516 | 20130731
Length = 698
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/481 (25%), Positives = 213/481 (44%), Gaps = 58/481 (12%)
Query: 17 STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLT 76
S ++ H L+V K S +V + + +++ G + AR++F ++P + VTWN ++
Sbjct: 181 SLSQQVHGLVV--KFGFSSNVIIGSALVDVYAKCGIMVYARRMFHEIPRPNAVTWNVIVR 238
Query: 77 AYWHSGFPQHSRALF-----DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE---- 127
Y G + + LF D + N NA+VA C L+E + +
Sbjct: 239 RYLDVGDAKEAVLLFTRMFSDGVKPLNFTFSNALVA-CSSMHALEEGMQIHGGVVKWGLH 297
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
+ +++I+ ++K G L + R+F ++ ++V +T ++ GY G AR LF
Sbjct: 298 EDTVVSSSLINMYVKCGELENGFRVFHQLGSKDLVCWTCIVSGYAM---SGKTWDARKLF 354
Query: 188 DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP------------------------- 222
D MP RN +SW M+ G + EA + M
Sbjct: 355 DQMPVRNVISWNAMLAGYTRFFKWSEALDFVCLMLDTVKDLDHVTLGLMINVSAGLLDHE 414
Query: 223 --------------QKNVVASTAMITGFCKQGKVDEAWTLFQQI-RCRDIASWNIMITGY 267
N++ A++ + K G ++ A F + RD SWN ++
Sbjct: 415 MGKQLHGFVYRHGFHSNLMVGNAILDMYGKCGNLNSARVWFNLMSNWRDRVSWNALLASC 474
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+ E+ L +FS+M + +P F +L ACA+ L G+Q + +I+H F D
Sbjct: 475 GLHHSSEQTLTMFSEM-QWEAKPSKYTFGTLLAACANTYSLHLGKQIHGFIIRHEFQIDS 533
Query: 328 SVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ AL+ MY KC + + E+ G S+ D++ WNT+I + A F M A
Sbjct: 534 VIRTALIYMYCKCYCLEYAVEILKGAVSR-DVIMWNTLILGCCHNHRGRDALELFGIMEA 592
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
G++PD +TF +L C G ++ F M ++YG+ P EHY C++++ SR G +
Sbjct: 593 EGIKPDRVTFEGILLACVEEGLVEFGTQCFESMSNEYGVLPWLEHYGCMIELYSRHGYMD 652
Query: 447 R 447
Sbjct: 653 E 653
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 213/463 (46%), Gaps = 49/463 (10%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
++ N + A+++ ++ A+++FD+MP +D +WN+++TAY +P + +LF M
Sbjct: 98 IFLRNRALEAYAKCSSLHDAQELFDEMPQRDGGSWNALITAYSRLRYPDEAISLFLWMNK 157
Query: 97 KNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCD 148
V +++ +++ C L + + + N +A++ + K G +
Sbjct: 158 DGVRANNITFASVLGSCADVYELSLSQQVHGLVVKFGFSSNVIIGSALVDVYAKCGIMVY 217
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGG--------------------------GIAR 182
A+R+F E+P PN V++ V++ Y+ V + +
Sbjct: 218 ARRMFHEIPRPNAVTWNVIVRRYLDVGDAKEAVLLFTRMFSDGVKPLNFTFSNALVACSS 277
Query: 183 ARALFDAMP----------RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAM 232
AL + M + V + +IN V+ G E + +F ++ K++V T +
Sbjct: 278 MHALEEGMQIHGGVVKWGLHEDTVVSSSLINMYVKCGELENGFRVFHQLGSKDLVCWTCI 337
Query: 233 ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
++G+ GK +A LF Q+ R++ SWN M+ GY + + EAL+ M+ T D
Sbjct: 338 VSGYAMSGKTWDARKLFDQMPVRNVISWNAMLAGYTRFFKWSEALDFVCLMLDTVKDLDH 397
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
+ + A L + G+Q + V +HGF S+L V NA++ MY KCG++ + + F
Sbjct: 398 VTLGLMINVSAGLLDHEMGKQLHGFVYRHGFHSNLMVGNAILDMYGKCGNLNSARVWFNL 457
Query: 353 TSQ-PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
S D VSWN ++A+ H + + F +M +P TF +LL+ C +
Sbjct: 458 MSNWRDRVSWNALLASCGLHHSSEQTLTMFSEM-QWEAKPSKYTFGTLLAACANTYSLHL 516
Query: 412 SMNLFNLMV-HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ ++ H++ I S L+ + + L+ A EI++
Sbjct: 517 GKQIHGFIIRHEFQID--SVIRTALIYMYCKCYCLEYAVEILK 557
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 1/150 (0%)
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
++ F C S + + ++ + + + N + Y+KC S+ D++ F +
Sbjct: 65 LYAHFFRHCRSPKSIAAAHKVEFHLVATTRNPPIFLRNRALEAYAKCSSLHDAQELFDEM 124
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
Q D SWN +I A+++ +A S F M GVR + ITF S+L C ++ S
Sbjct: 125 PQRDGGSWNALITAYSRLRYPDEAISLFLWMNKDGVRANNITFASVLGSCADVYELSLSQ 184
Query: 414 NLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
+ L+V +G + LVDV ++ G
Sbjct: 185 QVHGLVV-KFGFSSNVIIGSALVDVYAKCG 213
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 178/366 (48%), Gaps = 23/366 (6%)
Query: 94 MPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKF-------GRL 146
+P+ +++S ++ C L E A + N + +I+ FI F +
Sbjct: 24 LPLPHLIS---LIPKCTT---LKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASM 77
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
A +LF ++ PN+V + M GY ++ + R F R + + L
Sbjct: 78 EHAHQLFDQITQPNIVLFNTMARGYARLNDP---LRMITHF-----RRCLRLVSKVKALA 129
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
E G VV + +I + G +D + +F +I + ++N +I
Sbjct: 130 EGKQLHCFAVKLGVSDNMYVVPT--LINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMS 187
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
A+N R EAL LF ++ G++P D+ + + ++CA L LD GR + V K+GFD
Sbjct: 188 LARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRY 247
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ VN L+ MY+KCGS+ D+ F + D +W+ II A+A H ++A S ++M
Sbjct: 248 VKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKK 307
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
V+PD ITFL +L C G ++E F+ M ++YGI P +HY C+VD++ RAG+L
Sbjct: 308 EKVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLD 367
Query: 447 RACEII 452
A + I
Sbjct: 368 EAYKFI 373
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 105/235 (44%), Gaps = 21/235 (8%)
Query: 223 QKNVVASTAMITGFCK----QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
Q N T I FC + ++ A LF QI +I +N M GYA R + L
Sbjct: 55 QNNTNVITKFI-NFCTSNPTKASMEHAHQLFDQITQPNIVLFNTMARGYA---RLNDPLR 110
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
+ + R L VS A A +G+Q + +K G ++ V L+ MY+
Sbjct: 111 MITHFRRC------LRLVSKVKALA------EGKQLHCFAVKLGVSDNMYVVPTLINMYT 158
Query: 339 KCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
CG I S F + +P +V++N II + A++ +A + F ++ +G++P +T L
Sbjct: 159 ACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLV 218
Query: 399 LLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+LS C G +D + V YG + L+D+ ++ G L A + R
Sbjct: 219 VLSSCALLGSLDLG-RWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFR 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM--------- 94
I ++ G+I A+R+VFDK+ VV +N+++ + + + ALF +
Sbjct: 154 INMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTD 213
Query: 95 -PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
M V+S A++ + E + +R +I + K G L DA +F
Sbjct: 214 VTMLVVLSSCALLGSLDLGRWMHEYVKKYGF--DRYVKVNTTLIDMYAKCGSLDDAVNVF 271
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENG 209
++MP + +++ +I Y +G +A ++ + M + +E+++ ++ NG
Sbjct: 272 RDMPKRDTQAWSAIIVAYATHGDG---FQAISMLNEMKKEKVQPDEITFLGILYACSHNG 328
Query: 210 LYEEAWELF-GRMPQKNVVAST----AMITGFCKQGKVDEAWTLFQQIRCRDIAS-WNIM 263
L EE +E F G + +V S M+ + G++DEA+ ++ + W +
Sbjct: 329 LVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTL 388
Query: 264 ITGYAQNGRGE 274
++ + +G E
Sbjct: 389 LSACSTHGNVE 399
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 159/327 (48%), Gaps = 9/327 (2%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
N ++ ++ + A R+FK +P P+VVS+T +I G K A + + P
Sbjct: 97 NTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSINVKP-- 154
Query: 194 NEVSWTVMIN-----GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTL 248
N ++ I+ G ++ G A+ L M N+V A + + K G A +
Sbjct: 155 NALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNV 214
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLAL 307
F ++ RD+ SW ++ YA+ G+ EA+ +F QM+ +G +P++ V++ +ACAS+
Sbjct: 215 FVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGS 274
Query: 308 LDQGRQTYALVIKH-GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
L G + + K D D ++ NALV MY KCG + F D++SW T+I
Sbjct: 275 LSLGCWVHDYIEKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVIC 334
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
A + + F M+ GV PD +TF+ LLS C G + E M F M YGI
Sbjct: 335 GLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIV 394
Query: 427 PRSEHYACLVDVMSRAGQLQRACEIIR 453
P+ HY C+VD+ RA + A ++
Sbjct: 395 PQMSHYGCMVDMYGRASLFEEAVAFLK 421
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 167/394 (42%), Gaps = 77/394 (19%)
Query: 23 HFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG 82
H L+ + H +D + N + + + ++ +A +VF +P+ DVV+W S+++ G
Sbjct: 81 HARLIKSGHI--FDGFIKNTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCG 138
Query: 83 FPQHSRALFDAMPMK-NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFI 141
F + F ++ +K N ++ + ++ C G I
Sbjct: 139 FETEAIEAFSSINVKPNALTLVSAISACSS--------------------------IGAI 172
Query: 142 KFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
KFG+ A L M N+V Y +D Y K G + AR +F M +R+ +SWT +
Sbjct: 173 KFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKC---GFFSNARNVFVKMSKRDVISWTTL 229
Query: 202 INGLVENGLYEEAWELFGRM-------PQKNVVAS------------------------- 229
+ G EA E+F +M P ++ V +
Sbjct: 230 LMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKRI 289
Query: 230 ---------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
A++ + K G + +F + +D+ SW +I G A NG G++ + +F
Sbjct: 290 DLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYGKQVVQMF 349
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSK 339
S M+ G+ PDD+ F+ L +AC+ + L+ +G + A+ +G +S +V MY +
Sbjct: 350 SHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGCMVDMYGR 409
Query: 340 CGSIVDSELAF--GQTSQPDIVSWNTIIAAFAQH 371
S+ + +AF G + + W+ ++ A H
Sbjct: 410 -ASLFEEAVAFLKGMPVEAEGPIWSALLQACKTH 442
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
NL +QM+ + F AC S +G + +A +IK G D + N L+
Sbjct: 43 FNLCNQMLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYF 102
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y +V + F PD+VSW ++I+ ++ +A F ++ V+P+ +T
Sbjct: 103 YLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFS---SINVKPNALTL 159
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+S +S C G I F +H YG+
Sbjct: 160 VSAISACSSIGAIK-----FGKAIHAYGL 183
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/461 (29%), Positives = 210/461 (45%), Gaps = 36/461 (7%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFD 61
LSSI L+ + + H+H L F S A S GN++ A +F
Sbjct: 16 LSSISELKQLQAIITKSGLHSHIPLTTKLIFFS-----------ALSPFGNLSHAYSLFQ 64
Query: 62 --KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAF 119
+ + N+M+ A+ HS FP + +++ M + NVVS + N +L
Sbjct: 65 HSSILIHNPFISNTMIRAFSHSCFPLQALLIYNQMLINNVVSDSYTC-----NFVLKACS 119
Query: 120 NYFAAMPERNAASYNAMISGFIKFGRL-CDAQRL-FKEMP-CPNVVSYTVMIDGYVKVKE 176
+ + E + + ++ + K + C ++ F+ P N + Y G V V
Sbjct: 120 RAYKLIQESGSCDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSV-- 177
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF 236
AR LFD + + VSW +MI+ YE A L MP K VV+ +I +
Sbjct: 178 ------ARHLFDQIKDTSLVSWNIMISAYDLVNDYESADYLLELMPCKTVVSWNTLIARY 231
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
+ G V A +F + R+ SWN MI G AL LFS+M G++P ++ +
Sbjct: 232 IRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLI 291
Query: 297 SLFTACASLALLDQGRQTYA--LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
S+ ACA L+ G + Y V +H +S L NALV MY KCG++ + F
Sbjct: 292 SILGACAETGALEIGHKIYESLKVCEHKIESYL--GNALVNMYCKCGNLSLAWEIFNGMK 349
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQM---IAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ WN ++ A H + F +M + +RPD +TF+ +L C G +D+
Sbjct: 350 MKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDK 409
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+ F+ MV Y I P S+HY C+VD++SR G L+ A +II
Sbjct: 410 ARWYFDHMVKRYKIVPDSKHYGCMVDLLSRWGLLEEAYQII 450
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 28/283 (9%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N+ I+A+ + +A + + MP K VV+WN+++ Y G Q +R +F MP +N V
Sbjct: 194 NIMISAYDLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRVFGCMPERNAV 253
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEM 156
SWN+M+AGCV A F+ M + + +++ + G L ++++ +
Sbjct: 254 SWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESL 313
Query: 157 P-CPNVV-SY--TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
C + + SY +++ Y K G ++ A +F+ M + W M+ GL +G E
Sbjct: 314 KVCEHKIESYLGNALVNMYCKC---GNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCE 370
Query: 213 EAWELFGRMPQK-------NVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASW 260
E ++LF M + + V ++ +G VD+A F + R D +
Sbjct: 371 EVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHY 430
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTAC 302
M+ ++ G EEA Q++ T Q +++ +L AC
Sbjct: 431 GCMVDLLSRWGLLEEAY----QIIMTAPFQNSVVLWRTLLGAC 469
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 122/299 (40%), Gaps = 60/299 (20%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV- 99
N IA + R G++ AAR+VF MP ++ V+WNSM+ + LF M V
Sbjct: 225 NTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVK 284
Query: 100 ---VSWNAMVAGCVQNDMLDEAFNYFAAMP--ERNAASY--NAMISGFIKFGRLCDAQRL 152
V+ +++ C + L+ + ++ E SY NA+++ + K G L A +
Sbjct: 285 PTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEI 344
Query: 153 F-----KEMPCPNVVSYTVMIDGY------------------------------VKVKEG 177
F K + C N + + + GY V
Sbjct: 345 FNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHK 404
Query: 178 GGIARARALFDAMPRRNEV-----SWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAM 232
G + +AR FD M +R ++ + M++ L GL EEA+++ P +N V
Sbjct: 405 GLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRT 464
Query: 233 ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG--------YAQNGRGEEALNLFSQM 283
+ G C+ ++ T +I + +A +I G YA+ GR +E L S+M
Sbjct: 465 LLGACRT----QSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEM 519
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 134/246 (54%), Gaps = 1/246 (0%)
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
G E+A ++F M + VV MI GFCK G ++ LF+++ R + SWN+MI+ A
Sbjct: 157 GKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLA 216
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD-L 327
Q + EA +F +M+ G +PDD V++ CA L +D G ++ G +
Sbjct: 217 QRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVI 276
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
SV N+LV Y KCG++ + F + ++ ++VSWN +I+ + F++M
Sbjct: 277 SVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARK 336
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
GV P TF+ +L+ C AG +D+ +F+ M + + P+ EHY C+VD++ R G ++
Sbjct: 337 GVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKE 396
Query: 448 ACEIIR 453
A ++IR
Sbjct: 397 AYDLIR 402
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 180/412 (43%), Gaps = 63/412 (15%)
Query: 17 STARHTHFLLVFAKHFSSYDVYRANLNIAAF----SRAGNITAARQVFDKMPTKDVVTWN 72
+T TH + A HF + ++ +N ++ F + I A +F+ +++ +N
Sbjct: 18 NTKTQTHLPQIHA-HFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPNILLFN 76
Query: 73 SMLTAYWHSGFP--QHSRALFDAMPM-KNVVSWNAMVAGCVQN-------DMLDEAFNYF 122
S++ A HS FP S F+ M M N++ N ++ D+ +
Sbjct: 77 SIIKA--HSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLHAHV 134
Query: 123 AAMP-ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
A+ R++ ++ + G++ DA ++F EM VV + +MI+G+ K+ G +
Sbjct: 135 TALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKM---GDLE 191
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ------------------ 223
LF M +R+ VSW +MI+ L + EA+ +F M +
Sbjct: 192 IGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCA 251
Query: 224 ----------------------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
K + +++ +CK G ++ AW +F ++ +++ SWN
Sbjct: 252 RLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWN 311
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIK 320
MI+G NG+GE + LF +M R G+ P D FV + CA +D+GR+ + ++ +K
Sbjct: 312 AMISGLGLNGKGELGVELFEKMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVK 371
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
L +V + +CG + ++ +L P+ W +++A H
Sbjct: 372 FKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGALLSACRTH 423
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 32/202 (15%)
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLF 299
++ A T+F +I +N +I ++ ++ + F+ M T + PD+ F L
Sbjct: 56 QIPYATTIFNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLL 115
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ------- 352
A + L D G+ +A V GF V L+ +YS CG + D+ F +
Sbjct: 116 KATSYLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVV 175
Query: 353 ------------------------TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
Q +VSWN +I+ AQ +A F +M+ G
Sbjct: 176 VWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQG 235
Query: 389 VRPDGITFLSLLSVCCRAGKID 410
PD T +++L VC R G +D
Sbjct: 236 FEPDDATLVTVLPVCARLGDVD 257
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 213/418 (50%), Gaps = 31/418 (7%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM---PMK-NVVSWNAMVA 107
+++ AR +FD + KDV++W S+++ Y S P S +LF M P++ N + ++++
Sbjct: 103 HLSHARHLFDSLHVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIK 162
Query: 108 GC-VQNDMLDEAFNYFAAMPERNAASYNAMISGFI--KFG---RLCDAQRLFKEMPCP-N 160
C ND+ F +M +N ++S + +G + DA+R+F E+ +
Sbjct: 163 ACSALNDV--NLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDD 220
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV-----SWTVMINGLVENGLYEEAW 215
V +T +I + + + F M R V ++ ++ GL +
Sbjct: 221 VFCWTSIISCFTR---NDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGK 277
Query: 216 ELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRC-RDIASWNIMITGYAQN 270
E+ G++ NVV ++++ + K G V + +F+++ ++ SW M+ Y QN
Sbjct: 278 EVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQN 337
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
+ L+L VR + F + AC+ LA ++ G++ + + ++ G D+ +
Sbjct: 338 KEYQNVLDL----VRERGDLNFYAFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIE 393
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
+ALV +Y+KCG + + F ++++WN++++ FAQ+ +A + F+ MI G++
Sbjct: 394 SALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIK 453
Query: 391 PDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
PD ITF+++L C AG +DE +F LM +YGI P EHY C++D++ RAG + A
Sbjct: 454 PDSITFVAVLFACSHAGLVDEGRKVFTLM-GEYGIKPVVEHYNCMIDLLGRAGFIDEA 510
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 200/437 (45%), Gaps = 60/437 (13%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWN-----SMLTAYWHSGFPQHSRALFDAMPMKN 98
I A S ++ R F M WN S++ Y + +R +FD + +K+
Sbjct: 161 IKACSALNDVNLGR-CFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKD 219
Query: 99 -VVSWNAMVAGCVQNDMLDEAFNYFAAMPE-----RNAASYNAMISGFIKFGRLCDAQRL 152
V W ++++ +NDM E+ +F M + ++ +++ G L + +
Sbjct: 220 DVFCWTSIISCFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEV 279
Query: 153 FKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP-RRNEVSWTVMINGLVE 207
++ NVV + ++D Y K G + +R +F+ + +N VSWT M+ +
Sbjct: 280 HGKVVGLGFGGNVVVESSLLDMYGKC---GCVRHSRIVFERLSDEKNNVSWTAMLGVYCQ 336
Query: 208 NGLYEEAWEL-----------FG------------------------RMPQKNVVASTAM 232
N Y+ +L FG + K+V+ +A+
Sbjct: 337 NKEYQNVLDLVRERGDLNFYAFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIESAL 396
Query: 233 ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
+ + K G VD A T+F + R++ +WN M++G+AQNGRG EAL LF M++ G++PD
Sbjct: 397 VDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPDS 456
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE-LAFG 351
+ FV++ AC+ L+D+GR+ + L+ ++G + N ++ + + G I ++E L
Sbjct: 457 ITFVAVLFACSHAGLVDEGRKVFTLMGEYGIKPVVEHYNCMIDLLGRAGFIDEAECLLEN 516
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD-GITFLSLLSVCCRAGKID 410
+ D W ++ A + Y A +MI + PD ++++ L ++ G+ D
Sbjct: 517 ADCRYDKSLWAALLGACTKCSDYRTAERVARKMIE--LEPDFHLSYVLLNNIYREVGRWD 574
Query: 411 ESMNLFNLMVHDYGIPP 427
+++ + LM D G+
Sbjct: 575 DALEIRKLM-EDRGVKK 590
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 264 ITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
I + + G A++L + T ++P +I+ SL G +A V+K G
Sbjct: 23 ILHHLKTGSLSHAIHLLNTSQPTLSLKP--VIYASLLQTSVKTNSFHHGASVHAHVLKSG 80
Query: 323 FDSDLSVNNALVTMYSKCG---SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
SD V N+L+T+Y K + + F D++SW ++I+ + + L +++ S
Sbjct: 81 LHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSLHVKDVISWTSLISGYTRSDLPHQSIS 140
Query: 380 YFDQMIAVGVRPDGITFLSLLSVC 403
F +M+A V+P+ T S++ C
Sbjct: 141 LFYEMLAFPVQPNAFTLSSVIKAC 164
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 96/210 (45%), Gaps = 11/210 (5%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQH 86
++ + S DV + + +++ G + A +F M ++++TWNSM++ + +G
Sbjct: 380 MYVRKGGSKDVIIESALVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQNGRGVE 439
Query: 87 SRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERN----AASYNAMIS 138
+ ALF+ M + + +++ A++ C ++DE F M E YN MI
Sbjct: 440 ALALFEDMIKEGIKPDSITFVAVLFACSHAGLVDEGRKVFTLMGEYGIKPVVEHYNCMID 499
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVS-YTVMIDGYVKVKEGGGIAR-ARALFDAMPRRNEV 196
+ G + +A+ L + C S + ++ K + R AR + + P + +
Sbjct: 500 LLGRAGFIDEAECLLENADCRYDKSLWAALLGACTKCSDYRTAERVARKMIELEPDFH-L 558
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKNV 226
S+ ++ N E G +++A E+ M + V
Sbjct: 559 SYVLLNNIYREVGRWDDALEIRKLMEDRGV 588
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 140/243 (57%), Gaps = 5/243 (2%)
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
G +A LF + +K+VV TAMI G+ K G V+ A +F ++ R++ SW+ M+ Y+
Sbjct: 164 GELRKARVLFDQTGRKDVVLWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYS 223
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD---S 325
+ E L+LF +M G++P+D + V++ TACA L L QG ++ + FD S
Sbjct: 224 RVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGALTQGMWVHSYARR--FDRVSS 281
Query: 326 DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI 385
+ + ALV MYSKCG + + F S D+ +WN +I+ A + K+ F QMI
Sbjct: 282 NPILATALVDMYSKCGCVESALSVFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMI 341
Query: 386 AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
G +P+ TF+++L+ C A + E + LF M YG+ P +EHYAC+VD++SR+G +
Sbjct: 342 VCGNKPNETTFVAVLTACTHARMVREGLRLFEEMSGTYGVEPCAEHYACVVDLLSRSGMV 401
Query: 446 QRA 448
+ A
Sbjct: 402 EEA 404
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 134/308 (43%), Gaps = 27/308 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D Y + I +S G + AR +FD+ KDVV W +M+ Y G + +R +FD MP
Sbjct: 149 DAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLWTAMIDGYGKIGDVESAREMFDEMP 208
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQ- 150
+NVVSW+AM+A + E + F M N + +++ G L
Sbjct: 209 ERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGALTQGMW 268
Query: 151 -----RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
R F + N + T ++D Y K G + A ++FD + ++ +W MI+G+
Sbjct: 269 VHSYARRFDRVS-SNPILATALVDMYSKC---GCVESALSVFDGISDKDVGAWNAMISGV 324
Query: 206 VENGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQIR-------C 254
NG ++ ELF +M + N A++T V E LF+++ C
Sbjct: 325 ALNGDARKSLELFQQMIVCGNKPNETTFVAVLTACTHARMVREGLRLFEEMSGTYGVEPC 384
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
+ + ++ +++G EEA + + D ++ ++ AC ++ G +
Sbjct: 385 AE--HYACVVDLLSRSGMVEEAERFIEEKMGGFAAGDANVWGAILNACRIYKNINVGNRV 442
Query: 315 YALVIKHG 322
+ +I G
Sbjct: 443 WKKLIDMG 450
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 138/345 (40%), Gaps = 42/345 (12%)
Query: 65 TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAA 124
T D + + Y G + +R LFD K+VV W AM+ G + ++ A F
Sbjct: 147 TNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLWTAMIDGYGKIGDVESAREMFDE 206
Query: 125 MPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNV-VSYTVMIDGYVKVKEGGGIARA 183
MPERN S++AM++ + + + LF EM V + +V++ G + +
Sbjct: 207 MPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEGVRPNDSVLVTVLTACAHLGALTQG 266
Query: 184 RALFDAMPRRNEVS-----WTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCK 238
+ R + VS T +++ + G E A +F + K+V A AMI+G
Sbjct: 267 MWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALSVFDGISDKDVGAWNAMISGVAL 326
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
G ++L LF QM+ G +P++ FV++
Sbjct: 327 NGD-------------------------------ARKSLELFQQMIVCGNKPNETTFVAV 355
Query: 299 FTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL----AFGQT 353
TAC ++ +G + + + +G + +V + S+ G + ++E G
Sbjct: 356 LTACTHARMVREGLRLFEEMSGTYGVEPCAEHYACVVDLLSRSGMVEEAERFIEEKMGGF 415
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
+ D W I+ A + + ++I +GV G L+
Sbjct: 416 AAGDANVWGAILNACRIYKNINVGNRVWKKLIDMGVADCGTHVLT 460
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 245 AWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
A ++F + R R+ N MI Y QN A++ ++ M++ G+ ++ F L +C
Sbjct: 58 ARSIFHNLTHRNRNTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIAVNNYTFPPLIKSC 117
Query: 303 ASLALLDQ--------GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
+L G + V+ G +D V + + YS G + + + F QT
Sbjct: 118 TALIAASSKCASSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTG 177
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
+ D+V W +I + + AR FD+M V +++ ++++ R + E ++
Sbjct: 178 RKDVVLWTAMIDGYGKIGDVESAREMFDEMPERNV----VSWSAMMAAYSRVSEFREVLD 233
Query: 415 LFNLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
LF L + G+ P + LV V++ L
Sbjct: 234 LF-LEMQSEGVRPND---SVLVTVLTACAHL 260
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 194/423 (45%), Gaps = 33/423 (7%)
Query: 45 AAFSRAGNITAARQVFD--KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS- 101
+A S GN++ A +F + + N+M+ A+ HS FP + +++ M + NVVS
Sbjct: 48 SALSPFGNLSHAYSLFQHSSILIHNPFISNTMIRAFSHSCFPLQALLIYNQMLINNVVSD 107
Query: 102 ---WNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNA---MISGFIKFGRLCDAQRLFKE 155
N ++ C + L + + YN + IK G F+
Sbjct: 108 SYTCNFVLKACSRAYKLIQESGSCDDDDDNLVVVYNKGTEIHCRVIKIG--------FQN 159
Query: 156 MP-CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEA 214
P N + Y G V V AR LFD + + VSW +MI+ YE A
Sbjct: 160 DPSVQNSLLYFYSQCGLVSV--------ARYLFDQIKDTSLVSWNIMISAYDRVDDYELA 211
Query: 215 WELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
L MP K V++ +I + + G V A +F + R+ SWN MI G
Sbjct: 212 DHLLELMPCKTVISWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYA 271
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA--LVIKHGFDSDLSVNNA 332
AL LFS+M G++P ++ +S+ ACA L+ G + Y V +H +S L NA
Sbjct: 272 GALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYL--GNA 329
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM---IAVGV 389
LV MY KCG++ + F + WN ++ A H + F +M + +
Sbjct: 330 LVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSI 389
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
RPD +TF+ +L C G +D++ F+ MV Y I P S+HY C+VD+++R G L+ A
Sbjct: 390 RPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRRGLLEEAY 449
Query: 450 EII 452
+II
Sbjct: 450 QII 452
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 177/375 (47%), Gaps = 19/375 (5%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
NS+L Y G +R LFD + ++VSWN M++ + D + A + MP +
Sbjct: 165 NSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNIMISAYDRVDDYELADHLLELMPCKTVI 224
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
S+N +I+ +I+ G + A+R+F MP N VS+ MI G V V++ G A LF M
Sbjct: 225 SWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAG---ALELFSEMQ 281
Query: 192 ----RRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVD 243
+ EV+ ++ E G E +++ + + A++ +CK G +
Sbjct: 282 NAGVKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLS 341
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT---GMQPDDLIFVSLFT 300
AW +F ++ + ++ WN M+ G A +G EE LF++M + ++PD + F+ +
Sbjct: 342 LAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLV 401
Query: 301 ACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDI 358
AC+ L+D+ R + +V ++ D +V + ++ G + ++ ++ Q +
Sbjct: 402 ACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSV 461
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
V W T++ A A F Q+ + DG ++ L ++ AG+ DE L +
Sbjct: 462 VLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDG-DYVLLSNIYAEAGRWDEVERLRSE 520
Query: 419 MVHDYGIPPRSEHYA 433
M DY PR Y+
Sbjct: 521 M--DYLHVPRQAGYS 533
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 28/283 (9%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N+ I+A+ R + A + + MP K V++WN+++ Y G Q +R +F MP +N V
Sbjct: 196 NIMISAYDRVDDYELADHLLELMPCKTVISWNTLIARYIRLGDVQAARRVFGCMPERNAV 255
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEM 156
SWN+M+AGCV A F+ M + + +++ + G L ++++ +
Sbjct: 256 SWNSMIAGCVSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESL 315
Query: 157 P-CPNVV-SY--TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
C + + SY +++ Y K G ++ A +F+ M + W M+ GL +G E
Sbjct: 316 KVCEHKIESYLGNALVNMYCKC---GNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCE 372
Query: 213 EAWELFGRMPQK-------NVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASW 260
E ++LF M + + V ++ +G VD+A F + R D +
Sbjct: 373 EVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHY 432
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTAC 302
M+ + G EEA Q++ T Q +++ +L AC
Sbjct: 433 GCMVDLLTRRGLLEEAY----QIIMTAPFQNSVVLWRTLLGAC 471
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 142/262 (54%), Gaps = 21/262 (8%)
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQG-----KVDEAW--TLFQQ 251
T +I+ E G YE A ++F M Q NVVA A++T + G V W +F +
Sbjct: 152 TTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWREVVFCE 211
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
++ RD ASW+ MI G+A++G +A F +++R +P ++ + +ACA + G
Sbjct: 212 MKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFG 271
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
+ + + K GF +SVNNAL+ YSKCG++ ++L F + A H
Sbjct: 272 KILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFN--------------ISLAMH 317
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
+A F +M GVRPDG+TF+SLL C +G +++ LF+ M + YGI P EH
Sbjct: 318 GRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEH 377
Query: 432 YACLVDVMSRAGQLQRACEIIR 453
Y C+VD+ RA +LQ+A E IR
Sbjct: 378 YGCMVDLYGRAARLQKAYEFIR 399
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 168/391 (42%), Gaps = 68/391 (17%)
Query: 1 MLSSIIVSIALKPTPSSTARHTHFLL----VFAKHFSSYDVYRANLNIAAFSRAG---NI 53
M +++I S++ TP S+ + LL + FS + N R G +
Sbjct: 78 MYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDGCSKRQGIQLHS 137
Query: 54 TAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQND 113
A R FD + ++++ Y G +++R +FD M NVV+WNA+V C +
Sbjct: 138 HAFRHGFDD----HIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCG 193
Query: 114 M---LDEAFNY----FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
M L +F + F M R+ AS++ MI GF K G DA FKE
Sbjct: 194 MWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKE----------- 242
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKN- 225
L R +EVS T +++ + G +E L G M +
Sbjct: 243 -------------------LLRDRNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGF 283
Query: 226 ---VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
V + A+I + K G VD A +F NI + A +GR +EA+ +F +
Sbjct: 284 LCIVSVNNALIDTYSKCGNVDMAKLVF-----------NISL---AMHGRADEAIRVFHE 329
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCG 341
M +G++PD + F+SL AC+ L++QG ++ + +G + + +V +Y +
Sbjct: 330 MEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAA 389
Query: 342 SIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ + E P+++ W T++ A + H
Sbjct: 390 RLQKAYEFIRQMPILPNVIIWRTLLGACSIH 420
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 41/241 (17%)
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR-TGMQPDDLIFVSLFTACASLA 306
LF D +N +I + + +L F Q++R + PD F A+
Sbjct: 67 LFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIANDG 126
Query: 307 LLD-QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN--- 362
QG Q ++ +HGFD + V L++MY++CG + F + SQP++V+WN
Sbjct: 127 CSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVV 186
Query: 363 -----------------------------------TIIAAFAQHVLYYKARSYFDQMIAV 387
T+I FA+ ++ A +F +++
Sbjct: 187 TACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRD 246
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
RP ++ +LS C +AG + L M + S + A L+D S+ G +
Sbjct: 247 RNRPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNA-LIDTYSKCGNVDM 305
Query: 448 A 448
A
Sbjct: 306 A 306
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 160/328 (48%), Gaps = 43/328 (13%)
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF-------- 218
+ID Y ++ G + AR +FD + R+ W +I G G + EA ++
Sbjct: 58 LIDKYSQLG-GTNVEHARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGA 116
Query: 219 ----------------------GRMPQKNVV---------ASTAMITGFCKQGKVDEAWT 247
GR+ NVV A + + K +++ +
Sbjct: 117 APNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRK 176
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT-GMQ-PDDLIFVSLFTACASL 305
+F ++ RDI SWN M++GY NG +EA+ LF M+R G+ PD+ V++ A A
Sbjct: 177 VFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEK 236
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
A + G + ++K G D +V L+T+YS CG I ++ F Q +++ W+ II
Sbjct: 237 ADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAII 296
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+ H +A S F Q++ +G+ DGI FLSLLS C AG +E +LF M YG+
Sbjct: 297 RCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTM-ETYGV 355
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEIIR 453
HYAC+VD++ RAG L++A E+I+
Sbjct: 356 VKGEAHYACMVDLLGRAGNLEKAMELIQ 383
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 166/373 (44%), Gaps = 26/373 (6%)
Query: 20 RHTHFLLVFAKHFSSYDVYRANLNIAAFSRAG--NITAARQVFDKMPTKDVVTWNSMLTA 77
+ TH ++ H D + A I +S+ G N+ AR+VFD + +DV WN+++
Sbjct: 37 KQTHAQIIIGGH--KQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKG 94
Query: 78 YWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGC-VQNDMLDEAF---NYFAAMPERN 129
Y + G + +++AM + N ++ ++ C + D L N E +
Sbjct: 95 YANMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFD 154
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDA 189
NA ++ + K + ++++F EM ++VS+ M+ GY+ G + A LF
Sbjct: 155 LFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIA---NGYVDEAVMLFCD 211
Query: 190 MPRRNEVSW------TVMINGLVENGLYEEAWELFGRMPQKNVVASTA----MITGFCKQ 239
M R + + + ++ E + + + + + A +IT +
Sbjct: 212 MLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNC 271
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
G + A +F QI R++ W+ +I Y +G +EAL++F Q+V G+ D ++F+SL
Sbjct: 272 GYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLL 331
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDI 358
+AC+ + ++G + + +G + +V + + G++ + EL QP
Sbjct: 332 SACSHAGMHEEGWHLFQTMETYGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQPGK 391
Query: 359 VSWNTIIAAFAQH 371
+ ++ A H
Sbjct: 392 NVYGALLGASRIH 404
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 167/315 (53%), Gaps = 7/315 (2%)
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE-GGGIARARALFDAMPRRNEVSWTVMI 202
G L A +F+++ P Y ++ G + E I+ R + + R + ++ + +
Sbjct: 33 GNLSLAGNIFRQIQNPTTNDYNAILRGLAQSSEPTQSISWYRDMLCCVQRVDALTCSFAL 92
Query: 203 NGLVENGLYEEAWELFGRMPQKNVVASTAMITG----FCKQGKVDEAWTLFQQIRCRDIA 258
G + EA +L ++ + A ++T + K G +D A +F ++ RDIA
Sbjct: 93 KGCARALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIA 152
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SWN MI+G AQ R +EA+ LF++M G +P+D+ + +AC+ L L +G + V
Sbjct: 153 SWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGEIVHRYV 212
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKA 377
+ D ++ V NA++ M++KCG + + F S + +++WNT+I AFA + YKA
Sbjct: 213 LDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAMNGDGYKA 272
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
D+M G PD +++L L C AG +DE + LF+LM G+ +HY +VD
Sbjct: 273 LDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLFDLMKVS-GVKLNVKHYGSMVD 331
Query: 438 VMSRAGQLQRACEII 452
++ RAG+L+ A EII
Sbjct: 332 LLGRAGRLKEAYEII 346
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 118/265 (44%), Gaps = 23/265 (8%)
Query: 78 YWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASY 133
Y +GF ++R +FD M +++ SWNAM++G Q DEA F M E N +
Sbjct: 130 YAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRPNDVTV 189
Query: 134 NAMISGFIKFGRLCDAQRLFK----EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDA 189
+S + G L + + + + E NV+ +ID + K G + +A ++F++
Sbjct: 190 LGALSACSQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKC---GFVDKAYSVFES 246
Query: 190 MP-RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITG-FC---KQGKVDE 244
M R++ ++W MI NG +A +L RM G C G VDE
Sbjct: 247 MSCRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDE 306
Query: 245 AWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
LF ++ ++ + M+ + GR +EA + + M M PD +++ SL
Sbjct: 307 GVRLFDLMKVSGVKLNVKHYGSMVDLLGRAGRLKEAYEIINSM---PMFPDVVLWQSLLG 363
Query: 301 ACASLALLDQGRQTYALVIKHGFDS 325
AC + ++ +++ G +S
Sbjct: 364 ACKTYGNVEMAEMASKKLVEMGSNS 388
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 176/341 (51%), Gaps = 13/341 (3%)
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEG 177
F +P N YN++I+ + + +F +M PN ++T ++ V +
Sbjct: 45 FTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSS- 103
Query: 178 GGIARARALFDAMPRRNEVSW-TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF 236
+ + L + ++V + + +IN ++ A ++F +NVV T++++G+
Sbjct: 104 --LEQVFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGY 161
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-----MQPD 291
C G V+EA +F ++ R+ AS++ M++GY +NG E + LF ++ + ++ +
Sbjct: 162 CSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFN 221
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
+ VS+ AC + ++G+ ++ V ++G + DL + AL+ Y KCG + +E F
Sbjct: 222 GALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFN 281
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ D+ +W+ +I A + A F++M VG +P+ +TF+ +L+ C E
Sbjct: 282 KMPVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGE 341
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
S LF +M Y I P EHY C+VDV++R+GQ+++A I
Sbjct: 342 SARLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTFI 382
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 191/459 (41%), Gaps = 89/459 (19%)
Query: 46 AFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY-----WHSGFPQHSRALFDAMPMKNVV 100
A S G+ A +F +P ++ +NS++T+Y +H F ++ L + N
Sbjct: 31 ALSPRGDFRYAETLFTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKML-NTNIRPNSH 89
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY-NAMISGFIKFGRLCDAQRLFKEMPCP 159
++ +V CV L++ F + + + +++I+ F K + A+++F E
Sbjct: 90 TFTTLVKACVSLSSLEQVFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNR 149
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG 219
NVV +T ++ GY G + AR +FD MP RNE S++ M++G V NG + E +LF
Sbjct: 150 NVVCWTSLVSGYCSC---GLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFR 206
Query: 220 RMPQK--------------------------------------------NVVASTAMITG 235
+ +K ++ TA+I
Sbjct: 207 ELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDF 266
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+ K G V A +F ++ +D+A+W+ MI G A NG + AL LF +M + G +P+++ F
Sbjct: 267 YMKCGWVKGAEKVFNKMPVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTF 326
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
V + TAC +L + + + + ++
Sbjct: 327 VGVLTACNHKSLFGESARLFGI------------------------------MSEKYNIT 356
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
P I + ++ A+ KA ++ + M + PDG + SLL+ C G + +
Sbjct: 357 PSIEHYGCVVDVLARSGQVKKALTFINSM---HIEPDGAIWGSLLNGCLMHGHYELGQKV 413
Query: 416 FNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
++ P S Y L ++ + G+ + E+ +L
Sbjct: 414 GKYLIEFE--PKHSGRYVLLANMYANMGKWEGVSEVRKL 450
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 28/310 (9%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
+S DVY + I AFS+ I ARQVFD+ ++VV W S+++ Y G +R +FD
Sbjct: 116 NSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFD 175
Query: 93 AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRL--CDAQ 150
MP++N S++AMV+G V+N E F + +++ +G + L C
Sbjct: 176 KMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMV 235
Query: 151 RLFKEMPC------PNVVSY-----TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWT 199
F+E N + Y T +ID Y+K G + A +F+ MP ++ +W+
Sbjct: 236 GAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKC---GWVKGAEKVFNKMPVKDVATWS 292
Query: 200 VMINGLVENGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
MI GL NG + A ELF +M P+ N V ++T + E+ LF + +
Sbjct: 293 AMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEK 352
Query: 256 -----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
I + ++ A++G+ ++AL + M ++PD I+ SL C +
Sbjct: 353 YNITPSIEHYGCVVDVLARSGQVKKALTFINSM---HIEPDGAIWGSLLNGCLMHGHYEL 409
Query: 311 GRQTYALVIK 320
G++ +I+
Sbjct: 410 GQKVGKYLIE 419
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 134/238 (56%), Gaps = 1/238 (0%)
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+F +P NVV+ + MI+G+ K G VD A F + +D W MI+GY QN +E+
Sbjct: 164 VFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKES 223
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF-DSDLSVNNALVT 335
L LF M T + PD+ IFVS+ +ACA L L+ G + + + + ++ +L+
Sbjct: 224 LYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLD 283
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
MY+KCG++ ++ F + D+V WN +I+ A H A F M VGV+PD IT
Sbjct: 284 MYAKCGNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDIT 343
Query: 396 FLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F+++ + C +G E + L + M Y I P+SEHY CLVD++SRAG + A +IR
Sbjct: 344 FIAVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIR 401
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 16/203 (7%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+D+Y N +A + G++ AAR VFD++P+ +VV+W+ M++ Y G +R FD
Sbjct: 140 FDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEA 199
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM------PERNAASYNAMISGFIKFGRLCD 148
P K+ W AM++G VQN E+ F M P+ + + +++S G L
Sbjct: 200 PEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESI--FVSILSACAHLGALEI 257
Query: 149 AQRLFKEMPCPNVVSYTV-----MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
+ + + +V +V ++D Y K G + A+ LFD+M R+ V W MI+
Sbjct: 258 GVWIHQHLNQLKLVPLSVRLSTSLLDMYAKC---GNLELAKRLFDSMNMRDVVCWNAMIS 314
Query: 204 GLVENGLYEEAWELFGRMPQKNV 226
G+ +G + A +LF M + V
Sbjct: 315 GMAMHGDGKGALKLFYDMEKVGV 337
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 110/261 (42%), Gaps = 36/261 (13%)
Query: 224 KNVVASTAMITGFCKQGK-----VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
+N + + + FC K + A +F+QI+ + +N +I + N + + AL
Sbjct: 34 ENNTFALSRVLAFCSSHKHHHESLTYACRVFEQIQNPTVCIYNTLIKAFLVNNKFKSALQ 93
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
+F +M+++ ++PD+ + AC + G+ + K G D+ V N+L+ MY
Sbjct: 94 VFVKMLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYC 153
Query: 339 KCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ--------------- 383
G +V + F + ++VSW+ +I+ +A+ AR +FD+
Sbjct: 154 VFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISG 213
Query: 384 ----------------MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
M + PD F+S+LS C G ++ + + + +P
Sbjct: 214 YVQNSCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPL 273
Query: 428 RSEHYACLVDVMSRAGQLQRA 448
L+D+ ++ G L+ A
Sbjct: 274 SVRLSTSLLDMYAKCGNLELA 294
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 110/247 (44%), Gaps = 27/247 (10%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +V ++ I+ +++ G++ +AR FD+ P KD W +M++ Y + + S LF
Sbjct: 170 SLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRL 229
Query: 94 MPMKNVVS----WNAMVAGCVQNDMLD------EAFNYFAAMPERNAASYNAMISGFIKF 143
M + ++V + ++++ C L+ + N +P S +++ + K
Sbjct: 230 MQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLS-TSLLDMYAKC 288
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWT 199
G L A+RLF M +VV + MI G +G G A LF M + +++++
Sbjct: 289 GNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKG---ALKLFYDMEKVGVKPDDITFI 345
Query: 200 VMINGLVENGLYEEAWELFGRMPQ-KNVVAST----AMITGFCKQGKVDEAWTLFQQIRC 254
+ +G+ E L +M N+V + ++ + G +EA + ++I
Sbjct: 346 AVFTACSYSGMAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKI-- 403
Query: 255 RDIASWN 261
SWN
Sbjct: 404 --TNSWN 408
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 175/337 (51%), Gaps = 13/337 (3%)
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEG 177
F MP N YN++I+ + + + +F +M PN ++T ++ V +
Sbjct: 65 FTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTL--- 121
Query: 178 GGIARARALFDAMPRRNEVSW-TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF 236
+ + L ++V + + +IN ++G A ++F +NVV T++++G+
Sbjct: 122 SSLEQVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGY 181
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV-----RTGMQPD 291
C G V+E +F ++ R+ AS + M++GY +N E + LF ++ R ++ +
Sbjct: 182 CSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFN 241
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
+ VS+ AC + ++G+ ++ V ++G + DL + AL+ Y+KCG + D+E F
Sbjct: 242 GALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFD 301
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ D+ +W+ +I A + A F++M VG +P+ +TF+ +L+ C E
Sbjct: 302 KMLVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGE 361
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
S LF +M Y I P EHY C+VD+++R+GQ+++A
Sbjct: 362 SSRLFGIMSEKYNITPSIEHYGCIVDILARSGQVKKA 398
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 189/457 (41%), Gaps = 91/457 (19%)
Query: 46 AFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----S 101
A S G+ A +F MP ++ +NS++T+Y + S ++F M N+ +
Sbjct: 51 AASPRGDFRYAETLFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHT 110
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPERNAAS---YNAMISGFIKFGRLCDAQRLFKEMPC 158
+ +V CV L++ F M N++ +++I+ F K G + A+++F E
Sbjct: 111 FTTLVKSCVTLSSLEQVFTL--TMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSN 168
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
NVV +T ++ GY G + R +FD MP+RNE S + M++G V N + E +LF
Sbjct: 169 RNVVCWTSLVSGYCSC---GLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLF 225
Query: 219 GRMPQK--------------------------------------------NVVASTAMIT 234
+ +K ++ TA+I
Sbjct: 226 RELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALID 285
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
+ K G V +A +F ++ +D+A+W+ MI G A NG + AL LF +M + G +P+++
Sbjct: 286 FYAKCGWVKDAEKVFDKMLVKDVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVT 345
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
FV + TAC +L + + + + ++
Sbjct: 346 FVGVLTACNHKSLFGESSRLFGI------------------------------MSEKYNI 375
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
P I + I+ A+ KA + + M + PDG + SLL+ C G +
Sbjct: 376 TPSIEHYGCIVDILARSGQVKKALIFINSM---HIEPDGAIWGSLLNGCLMHGHYELGQK 432
Query: 415 LFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ ++ P S Y L ++ + G+ + E+
Sbjct: 433 VGKYLIE--FDPEHSGRYVLLANMYANMGKWEGVSEV 467
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 175/401 (43%), Gaps = 43/401 (10%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
K +S DVY + I FS+ G I ARQVFD+ ++VV W S+++ Y G R
Sbjct: 133 KSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRD 192
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRL--C 147
+FD MP +N S +AMV+G V+N E F + +++ +G + L C
Sbjct: 193 VFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNAC 252
Query: 148 DAQRLFKEMPC------PNVVSY-----TVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
F+E N + Y T +ID Y K G + A +FD M ++
Sbjct: 253 TVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKC---GWVKDAEKVFDKMLVKDVA 309
Query: 197 SWTVMINGLVENGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQI 252
+W+ MI GL NG + A ELF +M P+ N V ++T + E+ LF +
Sbjct: 310 TWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIM 369
Query: 253 RCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
+ I + ++ A++G+ ++AL + M ++PD I+ SL C
Sbjct: 370 SEKYNITPSIEHYGCIVDILARSGQVKKALIFINSM---HIEPDGAIWGSLLNGCLMHGH 426
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALV-TMYSKCGSIVD-SELA------FGQTSQPDIV 359
+ G++ +I+ FD + S L+ MY+ G SE+A Q I
Sbjct: 427 YELGQKVGKYLIE--FDPEHSGRYVLLANMYANMGKWEGVSEVAEVKSLFIAPNKQKSIE 484
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
+ +IA +L K+R + I V + F+SL
Sbjct: 485 NQENVIA-----ILLVKSRIKPNNFIDVFTDIGDMAFVSLF 520
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 158/333 (47%), Gaps = 43/333 (12%)
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF- 218
N++ ++ YV+ K I A LFD MP R+ +W++M+ G + G Y + F
Sbjct: 34 NLIVANKLLHFYVQHK---AINDAYYLFDEMPTRDPTTWSIMVGGFSKLGDYNNCYATFR 90
Query: 219 -----------------------------GRMPQKNVV---------ASTAMITGFCKQG 240
GRM V+ ++ + K
Sbjct: 91 EILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCATLVDMYAKCA 150
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
+++A LF + +D+ +W +MI YA E+L LF ++ G D + V++
Sbjct: 151 VIEDARKLFDVMVSKDLVTWTVMIGCYADYD-AYESLVLFDRLREEGFVSDKVAMVTVVN 209
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
ACA L + + R + +G D+ + A++ MY+KCG + + F + + +++S
Sbjct: 210 ACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVIS 269
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
W+ +IAA+ H +A F M++ G+ P+ ITF+SLL C +G DE ++ F+ M
Sbjct: 270 WSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDEGLHFFDSMW 329
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
DYG+ P +HY C+VD++ RAG+L A ++I
Sbjct: 330 RDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIE 362
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 177/412 (42%), Gaps = 82/412 (19%)
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGR 145
H+ AL + N++ N ++ VQ+ +++A+ F MP R+ +++ M+ GF K G
Sbjct: 23 HANALING-TFNNLIVANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKLGD 81
Query: 146 LCDAQRLFKEMPCPN------------------------------VVSYTVMIDGYV--- 172
+ F+E+ N V+ Y +++D +V
Sbjct: 82 YNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCAT 141
Query: 173 ---KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----- 224
+ I AR LFD M ++ V+WTVMI + YE + LF R+ ++
Sbjct: 142 LVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADYDAYE-SLVLFDRLREEGFVSD 200
Query: 225 ----------------------------------NVVASTAMITGFCKQGKVDEAWTLFQ 250
+V+ TAMI + K G VD A +F
Sbjct: 201 KVAMVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFD 260
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
+++ +++ SW+ MI Y +G+G+EAL+LF M+ G+ P+ + FVSL AC+ L D+
Sbjct: 261 RMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLTDE 320
Query: 311 GRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT--SQPDIVSWNTIIAA 367
G + ++ +G D+ +V + + G + D L +T + D W+ ++ A
Sbjct: 321 GLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRL-DEALKLIETMNVEKDERLWSALLGA 379
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
H A + ++ + + GI L L ++ +AGK ++ +LM
Sbjct: 380 CRVHGNMELAGKVAESLLELQPKNPGIYVL-LSNIYAKAGKWEKVGEFRDLM 430
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 111/274 (40%), Gaps = 51/274 (18%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ +++ I AR++FD M +KD+VTW M+ Y S LFD + + VS
Sbjct: 143 VDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADYD-AYESLVLFDRLREEGFVS-- 199
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN--- 160
+ + +++ K G + A R E C N
Sbjct: 200 -------------------------DKVAMVTVVNACAKLGAMHRA-RFVNEYICGNGLS 233
Query: 161 --VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
V+ T MID Y K G + AR +FD M +N +SW+ MI +G +EA +LF
Sbjct: 234 LDVILGTAMIDMYAKC---GCVDSAREVFDRMKEKNVISWSAMIAAYGYHGKGKEALDLF 290
Query: 219 GRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQ------IRCRDIASWNIMITGYA 268
M N + +++ G DE F +R D+ + ++
Sbjct: 291 HMMLSCGISPNRITFVSLLYACSHSGLTDEGLHFFDSMWRDYGVR-PDVKHYTCVVDLLG 349
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ GR +EAL L M ++ D+ ++ +L AC
Sbjct: 350 RAGRLDEALKLIETM---NVEKDERLWSALLGAC 380
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S DV I +++ G + +AR+VFD+M K+V++W++M+ AY + G + + LF
Sbjct: 233 SLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIAAYGYHGKGKEALDLFHM 292
Query: 94 M----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM-----PERNAASYNAMISGFIKFG 144
M N +++ +++ C + + DE ++F +M + Y ++ + G
Sbjct: 293 MLSCGISPNRITFVSLLYACSHSGLTDEGLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAG 352
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSWTVMI 202
RL +A +L + M + G +V +A A +L + P +N + ++
Sbjct: 353 RLDEALKLIETMNVEKDERLWSALLGACRVHGNMELAGKVAESLLELQP-KNPGIYVLLS 411
Query: 203 NGLVENGLYEEAWELFGRMPQKNV 226
N + G +E+ E M Q+ +
Sbjct: 412 NIYAKAGKWEKVGEFRDLMTQRKL 435
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 184/415 (44%), Gaps = 80/415 (19%)
Query: 51 GNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ---HSRALF-----DAMPMKNVVSW 102
++T A ++FD++P D+ +N+M+ + HS P S A+F D+ N S+
Sbjct: 57 ASLTYAHKLFDQIPQPDLFIYNTMIKS--HSMSPHSYLDSIAVFRSLIRDSGYFPNRYSF 114
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
C + E F + N NA+I F K+GR+ DA
Sbjct: 115 VFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDA--------- 165
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
R +FD+ R+ SW MI V +G A ELF
Sbjct: 166 -------------------------RNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELF 200
Query: 219 GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
M + RD+ SW+ +I GY Q G EAL+
Sbjct: 201 DEMHE-------------------------------RDVVSWSTIIAGYVQVGCFMEALD 229
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
F +M+++ ++P++ VS AC++L LDQG+ + + + + + +L+ MY+
Sbjct: 230 FFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYA 289
Query: 339 KCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
KCG I + F + + + WN +I FA H +A + F++M V P+ +TF+
Sbjct: 290 KCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFI 349
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+LL+ C + E + F LM DYGI P EHY C+VD++SR+G L+ + E+I
Sbjct: 350 ALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMI 404
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 25/324 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V+ N I F + G + AR VFD +D +WN+M+ AY SG ++ LFD M
Sbjct: 145 NVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMH 204
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN-AMISGFIKFGRLCDAQR--- 151
++VVSW+ ++AG VQ EA ++F M + M+S L +
Sbjct: 205 ERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKW 264
Query: 152 ----LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV-SWTVMINGLV 206
+ ++ N +ID Y K G I A ++F + +V W MI G
Sbjct: 265 IHVYIRRDNIKMNDRLLASLIDMYAKC---GEIDSASSVFHEHKVKRKVWPWNAMIGGFA 321
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGF---CKQG-KVDEAWTLFQQIRCR-----DI 257
+G EEA +F +M + V + C G V E + F+ + +I
Sbjct: 322 MHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEI 381
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+ M+ +++G +++ + M M PD I+ +L AC +++G +
Sbjct: 382 EHYGCMVDLLSRSGHLKDSEEMILSM---PMAPDVAIWGALLNACRIYKDMERGYRI-GR 437
Query: 318 VIKHGFDSDLSVNNALVTMYSKCG 341
+IK + + N L +YS G
Sbjct: 438 IIKEIDPNHIGCNVLLGNIYSTSG 461
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 140/346 (40%), Gaps = 60/346 (17%)
Query: 44 IAAFSRAGN---ITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
+ AF GN + QVF +V N+++ + G + +R +FD+
Sbjct: 115 VFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVD 174
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM 156
++ SWN M+ V + + A F M ER+ S++ +I+G+++ G +A F +M
Sbjct: 175 RDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKM 234
Query: 157 ----PCPN---VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWT-----VMING 204
PN +VS V + +G I RR+ + +I+
Sbjct: 235 LQSEVKPNEYTMVSALAACSNLVALDQGKWI-------HVYIRRDNIKMNDRLLASLIDM 287
Query: 205 LVENGLYEEAWELFGRMP-QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
+ G + A +F ++ V AMI GF GK +
Sbjct: 288 YAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPE-------------------- 327
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HG 322
EA+N+F +M + P+ + F++L AC+ ++ +G+ + L+ +G
Sbjct: 328 -----------EAINVFEKMKVEKVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYG 376
Query: 323 FDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAA 367
+ ++ +V + S+ G + DS E+ PD+ W ++ A
Sbjct: 377 INPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWGALLNA 422
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 136/249 (54%), Gaps = 9/249 (3%)
Query: 214 AWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
A ++F +P +VAS AMI F G ++ A +F+ + RD+ SW M+ G+A +G
Sbjct: 138 AQKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYRDVVSWTTMVNGFALSGNF 197
Query: 274 EEALNLFSQMVRTG------MQPDDLIFVSLFTACASL---ALLDQGRQTYALVIKHGFD 324
A+ F M+R ++P++ +VS+ ++C L LD GRQ + ++ G D
Sbjct: 198 GAAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVKGVD 257
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+ V +L+ +Y K G + S F ++ +WN +I++ A + +A F++M
Sbjct: 258 LGVFVGTSLINLYGKMGCLNYSASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEKM 317
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
G++P+ ITF+++L+ C R G + E + LF M + + P EHY C+VD++ RAG
Sbjct: 318 KLQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKFQVVPVMEHYGCVVDLLGRAGH 377
Query: 445 LQRACEIIR 453
+Q A EIIR
Sbjct: 378 IQEAAEIIR 386
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 123/265 (46%), Gaps = 31/265 (11%)
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDE 117
Q + D ++L Y + ++ +F+ +PM +V+ NAM+ N ++
Sbjct: 109 QALKRGILSDPFVLTTLLVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNGNMEG 168
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
A F MP R+ S+ M++GF G A R F
Sbjct: 169 ALLVFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFF------------------------ 204
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVE---NGLYEEAWELFGRMPQK----NVVAST 230
G + R + + D + + NE ++ +++ E G + ++ G + K V T
Sbjct: 205 GTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVKGVDLGVFVGT 264
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
++I + K G ++ + ++F+ + R++ +WN MI+ A NGR +EAL+LF +M G++P
Sbjct: 265 SLINLYGKMGCLNYSASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKP 324
Query: 291 DDLIFVSLFTACASLALLDQGRQTY 315
+ + FV++ TACA + +G + +
Sbjct: 325 NSITFVAVLTACARGGFVSEGLELF 349
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 131/297 (44%), Gaps = 34/297 (11%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ ++R +I A++VF+++P +V N+M+ A+ +G + + +F+ MP ++VVSW
Sbjct: 126 LVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYRDVVSWT 185
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPER----------NAASYNAMIS--------GFIKFGR 145
MV G + A +F M N A+Y +++S G + FGR
Sbjct: 186 TMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGKGALDFGR 245
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
+ K + V T +I+ Y K+ G + + ++F M R +W MI+ L
Sbjct: 246 QVHGYIVVKGVDL-GVFVGTSLINLYGKM---GCLNYSASVFRVMVVREVCTWNAMISSL 301
Query: 206 VENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----D 256
NG +EA +LF +M + N + A++T + G V E LF+ + +
Sbjct: 302 ASNGREKEALDLFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKFQVVPV 361
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
+ + ++ + G +EA + M PD + + AC ++ G +
Sbjct: 362 MEHYGCVVDLLGRAGHIQEAAEIIRNM---PFPPDKTVLGAFLGACRIHGAIELGEE 415
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 207/439 (47%), Gaps = 35/439 (7%)
Query: 44 IAAFSRAGNITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
I A S + A ++ ++M DV T+N ++ +G + L D M +++
Sbjct: 242 IHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 100 VSWNAMVAGCVQNDM-----LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL-F 153
+ +A++ G + + + +DEA + +P N YN +I+G++ GR +A+ L +
Sbjct: 302 TA-DALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLY 360
Query: 154 KEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGL 205
K M P+ ++ +MIDG K G + A D M ++ N +++T++I+G
Sbjct: 361 KNMVIAGFEPDAFTFNIMIDGLCK---KGYLVSALEFLDEMVKKGFEPNVITYTILIDGF 417
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
+ G +EEA ++ M K N V +I CK GK+ +A ++ ++ + DI
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++N +I G +N + EEAL L+ M+ G+ + + + +L A L L+ Q +
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGE 537
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDS----ELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ G D N L+ K G+ E FG+ P I S N +I +F +
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
A + MI G+ PD +T+ SL++ C+ G+ E++NLFN + GI P + Y
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN-GLQAKGIHPDAVTYN 656
Query: 434 CLVDVMSRAGQLQRACEII 452
L+ G AC+++
Sbjct: 657 TLISRYCYEGLFNDACQLL 675
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 189/431 (43%), Gaps = 69/431 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ-----HSRAL 90
DV N I +AG I A ++ D+M +D T ++++ Y G + +RA+
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF-TADALIQGYLMHGLCRMGKVDEARAM 327
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAF-----NYFAAMPERNAASYNAMISGFIKFGR 145
+P N V +N ++ G V + +EA N A E +A ++N MI G K G
Sbjct: 328 LSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY 387
Query: 146 LCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVS 197
L A EM PNV++YT++IDG+ K G A + ++M + N V
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCK---QGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIR 253
+ +I L ++G ++A +++G M K ++ ++I G CK K++EA L++ +
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 254 CRDI----ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA-CAS---- 304
+ ++N +I + + ++A L +M G D++ + L A C +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 305 --LALLDQ-----------------------GRQTYAL-----VIKHGFDSDLSVNNALV 334
L L++Q G+ AL +I+ G D+ N+L+
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 335 TMYSKCGSIVDSELAF----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
K G ++ F + PD V++NT+I+ + L+ A + ++ G
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684
Query: 391 PDGITFLSLLS 401
P+ IT+ L++
Sbjct: 685 PNEITWSILIN 695
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 215 WELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS----WNIMITGYAQN 270
+++ R V ++ FC +VD A +L + + + ++I ++N
Sbjct: 189 YDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSEN 248
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
R EA+ L +M G +PD F + + + + + ++ F +D +
Sbjct: 249 NRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQ 308
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS-YFDQMIAVGV 389
L+ + G + ++ + P+ V +NT+I + + +A+ + M+ G
Sbjct: 309 GYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
PD TF ++ C+ G + ++ + MV G P Y L+D + G + A
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITYTILIDGFCKQGHFEEAS 427
Query: 450 EII 452
+++
Sbjct: 428 KVV 430
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
N I AF R I A ++ +M + D +T+N ++ A +G + L + M
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575
Query: 97 KNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCD 148
+ + S N ++ + +++A + M +R + +YN++I+G K GR +
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Query: 149 AQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR---RNEVSWTVM 201
A LF + P+ V+Y +I Y EG + LF + NE++W+++
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLISRYCY--EGLFNDACQLLFKGVSNGFIPNEITWSIL 693
Query: 202 INGLVE 207
IN V+
Sbjct: 694 INYFVK 699
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 207/439 (47%), Gaps = 35/439 (7%)
Query: 44 IAAFSRAGNITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
I A S + A ++ ++M DV T+N ++ +G + L D M +++
Sbjct: 242 IHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 100 VSWNAMVAGCVQNDM-----LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL-F 153
+ +A++ G + + + +DEA + +P N YN +I+G++ GR +A+ L +
Sbjct: 302 TA-DALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLY 360
Query: 154 KEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGL 205
K M P+ ++ +MIDG K G + A D M ++ N +++T++I+G
Sbjct: 361 KNMVIAGFEPDAFTFNIMIDGLCK---KGYLVSALEFLDEMVKKGFEPNVITYTILIDGF 417
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
+ G +EEA ++ M K N V +I CK GK+ +A ++ ++ + DI
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++N +I G +N + EEAL L+ M+ G+ + + + +L A L L+ Q +
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGE 537
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDS----ELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ G D N L+ K G+ E FG+ P I S N +I +F +
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
A + MI G+ PD +T+ SL++ C+ G+ E++NLFN + GI P + Y
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN-GLQAKGIHPDAVTYN 656
Query: 434 CLVDVMSRAGQLQRACEII 452
L+ G AC+++
Sbjct: 657 TLISRYCYEGLFNDACQLL 675
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 189/431 (43%), Gaps = 69/431 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ-----HSRAL 90
DV N I +AG I A ++ D+M +D T ++++ Y G + +RA+
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF-TADALIQGYLMHGLCRMGKVDEARAM 327
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAF-----NYFAAMPERNAASYNAMISGFIKFGR 145
+P N V +N ++ G V + +EA N A E +A ++N MI G K G
Sbjct: 328 LSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY 387
Query: 146 LCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVS 197
L A EM PNV++YT++IDG+ K G A + ++M + N V
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCK---QGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIR 253
+ +I L ++G ++A +++G M K ++ ++I G CK K++EA L++ +
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 254 CRDI----ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA-CAS---- 304
+ ++N +I + + ++A L +M G D++ + L A C +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 305 --LALLDQ-----------------------GRQTYAL-----VIKHGFDSDLSVNNALV 334
L L++Q G+ AL +I+ G D+ N+L+
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 335 TMYSKCGSIVDSELAF----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
K G ++ F + PD V++NT+I+ + L+ A + ++ G
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684
Query: 391 PDGITFLSLLS 401
P+ IT+ L++
Sbjct: 685 PNEITWSILIN 695
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 215 WELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS----WNIMITGYAQN 270
+++ R V ++ FC +VD A +L + + + ++I ++N
Sbjct: 189 YDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSEN 248
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
R EA+ L +M G +PD F + + + + + ++ F +D +
Sbjct: 249 NRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQ 308
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS-YFDQMIAVGV 389
L+ + G + ++ + P+ V +NT+I + + +A+ + M+ G
Sbjct: 309 GYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
PD TF ++ C+ G + ++ + MV G P Y L+D + G + A
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITYTILIDGFCKQGHFEEAS 427
Query: 450 EII 452
+++
Sbjct: 428 KVV 430
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
N I AF R I A ++ +M + D +T+N ++ A +G + L + M
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575
Query: 97 KNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCD 148
+ + S N ++ + +++A + M +R + +YN++I+G K GR +
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Query: 149 AQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR---RNEVSWTVM 201
A LF + P+ V+Y +I Y EG + LF + NE++W+++
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLISRYCY--EGLFNDACQLLFKGVSNGFIPNEITWSIL 693
Query: 202 INGLVE 207
IN V+
Sbjct: 694 INYFVK 699
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 207/439 (47%), Gaps = 35/439 (7%)
Query: 44 IAAFSRAGNITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
I A S + A ++ ++M DV T+N ++ +G + L D M +++
Sbjct: 242 IHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 100 VSWNAMVAGCVQNDM-----LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL-F 153
+ +A++ G + + + +DEA + +P N YN +I+G++ GR +A+ L +
Sbjct: 302 TA-DALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLY 360
Query: 154 KEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGL 205
K M P+ ++ +MIDG K G + A D M ++ N +++T++I+G
Sbjct: 361 KNMVIAGFEPDAFTFNIMIDGLCK---KGYLVSALEFLDEMVKKGFEPNVITYTILIDGF 417
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
+ G +EEA ++ M K N V +I CK GK+ +A ++ ++ + DI
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++N +I G +N + EEAL L+ M+ G+ + + + +L A L L+ Q +
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGE 537
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDS----ELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ G D N L+ K G+ E FG+ P I S N +I +F +
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
A + MI G+ PD +T+ SL++ C+ G+ E++NLFN + GI P + Y
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN-GLQAKGIHPDAVTYN 656
Query: 434 CLVDVMSRAGQLQRACEII 452
L+ G AC+++
Sbjct: 657 TLISRYCYEGLFNDACQLL 675
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 189/431 (43%), Gaps = 69/431 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ-----HSRAL 90
DV N I +AG I A ++ D+M +D T ++++ Y G + +RA+
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF-TADALIQGYLMHGLCRMGKVDEARAM 327
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAF-----NYFAAMPERNAASYNAMISGFIKFGR 145
+P N V +N ++ G V + +EA N A E +A ++N MI G K G
Sbjct: 328 LSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY 387
Query: 146 LCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVS 197
L A EM PNV++YT++IDG+ K G A + ++M + N V
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCK---QGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIR 253
+ +I L ++G ++A +++G M K ++ ++I G CK K++EA L++ +
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 254 CRDI----ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA-CAS---- 304
+ ++N +I + + ++A L +M G D++ + L A C +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 305 --LALLDQ-----------------------GRQTYAL-----VIKHGFDSDLSVNNALV 334
L L++Q G+ AL +I+ G D+ N+L+
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 335 TMYSKCGSIVDSELAF----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
K G ++ F + PD V++NT+I+ + L+ A + ++ G
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684
Query: 391 PDGITFLSLLS 401
P+ IT+ L++
Sbjct: 685 PNEITWSILIN 695
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 215 WELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS----WNIMITGYAQN 270
+++ R V ++ FC +VD A +L + + + ++I ++N
Sbjct: 189 YDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSEN 248
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
R EA+ L +M G +PD F + + + + + ++ F +D +
Sbjct: 249 NRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQ 308
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS-YFDQMIAVGV 389
L+ + G + ++ + P+ V +NT+I + + +A+ + M+ G
Sbjct: 309 GYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
PD TF ++ C+ G + ++ + MV G P Y L+D + G + A
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITYTILIDGFCKQGHFEEAS 427
Query: 450 EII 452
+++
Sbjct: 428 KVV 430
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
N I AF R I A ++ +M + D +T+N ++ A +G + L + M
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575
Query: 97 KNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCD 148
+ + S N ++ + +++A + M +R + +YN++I+G K GR +
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Query: 149 AQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR---RNEVSWTVM 201
A LF + P+ V+Y +I Y EG + LF + NE++W+++
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLISRYCY--EGLFNDACQLLFKGVSNGFIPNEITWSIL 693
Query: 202 INGLVE 207
IN V+
Sbjct: 694 INYFVK 699
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 207/439 (47%), Gaps = 35/439 (7%)
Query: 44 IAAFSRAGNITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
I A S + A ++ ++M DV T+N ++ +G + L D M +++
Sbjct: 242 IHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 100 VSWNAMVAGCVQNDM-----LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL-F 153
+ +A++ G + + + +DEA + +P N YN +I+G++ GR +A+ L +
Sbjct: 302 TA-DALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLY 360
Query: 154 KEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGL 205
K M P+ ++ +MIDG K G + A D M ++ N +++T++I+G
Sbjct: 361 KNMVIAGFEPDAFTFNIMIDGLCK---KGYLVSALEFLDEMVKKGFEPNVITYTILIDGF 417
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
+ G +EEA ++ M K N V +I CK GK+ +A ++ ++ + DI
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++N +I G +N + EEAL L+ M+ G+ + + + +L A L L+ Q +
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGE 537
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDS----ELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ G D N L+ K G+ E FG+ P I S N +I +F +
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
A + MI G+ PD +T+ SL++ C+ G+ E++NLFN + GI P + Y
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN-GLQAKGIHPDAVTYN 656
Query: 434 CLVDVMSRAGQLQRACEII 452
L+ G AC+++
Sbjct: 657 TLISRYCYEGLFNDACQLL 675
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 189/431 (43%), Gaps = 69/431 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ-----HSRAL 90
DV N I +AG I A ++ D+M +D T ++++ Y G + +RA+
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF-TADALIQGYLMHGLCRMGKVDEARAM 327
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAF-----NYFAAMPERNAASYNAMISGFIKFGR 145
+P N V +N ++ G V + +EA N A E +A ++N MI G K G
Sbjct: 328 LSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY 387
Query: 146 LCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVS 197
L A EM PNV++YT++IDG+ K G A + ++M + N V
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCK---QGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIR 253
+ +I L ++G ++A +++G M K ++ ++I G CK K++EA L++ +
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 254 CRDI----ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA-CAS---- 304
+ ++N +I + + ++A L +M G D++ + L A C +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 305 --LALLDQ-----------------------GRQTYAL-----VIKHGFDSDLSVNNALV 334
L L++Q G+ AL +I+ G D+ N+L+
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 335 TMYSKCGSIVDSELAF----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
K G ++ F + PD V++NT+I+ + L+ A + ++ G
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684
Query: 391 PDGITFLSLLS 401
P+ IT+ L++
Sbjct: 685 PNEITWSILIN 695
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 215 WELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS----WNIMITGYAQN 270
+++ R V ++ FC +VD A +L + + + ++I ++N
Sbjct: 189 YDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSEN 248
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
R EA+ L +M G +PD F + + + + + ++ F +D +
Sbjct: 249 NRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQ 308
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS-YFDQMIAVGV 389
L+ + G + ++ + P+ V +NT+I + + +A+ + M+ G
Sbjct: 309 GYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
PD TF ++ C+ G + ++ + MV G P Y L+D + G + A
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITYTILIDGFCKQGHFEEAS 427
Query: 450 EII 452
+++
Sbjct: 428 KVV 430
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
N I AF R I A ++ +M + D +T+N ++ A +G + L + M
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575
Query: 97 KNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCD 148
+ + S N ++ + +++A + M +R + +YN++I+G K GR +
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Query: 149 AQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR---RNEVSWTVM 201
A LF + P+ V+Y +I Y EG + LF + NE++W+++
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLISRYCY--EGLFNDACQLLFKGVSNGFIPNEITWSIL 693
Query: 202 INGLVE 207
IN V+
Sbjct: 694 INYFVK 699
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 207/439 (47%), Gaps = 35/439 (7%)
Query: 44 IAAFSRAGNITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
I A S + A ++ ++M DV T+N ++ +G + L D M +++
Sbjct: 242 IHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 100 VSWNAMVAGCVQNDM-----LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL-F 153
+ +A++ G + + + +DEA + +P N YN +I+G++ GR +A+ L +
Sbjct: 302 TA-DALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLY 360
Query: 154 KEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGL 205
K M P+ ++ +MIDG K G + A D M ++ N +++T++I+G
Sbjct: 361 KNMVIAGFEPDAFTFNIMIDGLCK---KGYLVSALEFLDEMVKKGFEPNVITYTILIDGF 417
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
+ G +EEA ++ M K N V +I CK GK+ +A ++ ++ + DI
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++N +I G +N + EEAL L+ M+ G+ + + + +L A L L+ Q +
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGE 537
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDS----ELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ G D N L+ K G+ E FG+ P I S N +I +F +
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
A + MI G+ PD +T+ SL++ C+ G+ E++NLFN + GI P + Y
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN-GLQAKGIHPDAVTYN 656
Query: 434 CLVDVMSRAGQLQRACEII 452
L+ G AC+++
Sbjct: 657 TLISRYCYEGLFNDACQLL 675
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 189/431 (43%), Gaps = 69/431 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ-----HSRAL 90
DV N I +AG I A ++ D+M +D T ++++ Y G + +RA+
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF-TADALIQGYLMHGLCRMGKVDEARAM 327
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAF-----NYFAAMPERNAASYNAMISGFIKFGR 145
+P N V +N ++ G V + +EA N A E +A ++N MI G K G
Sbjct: 328 LSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY 387
Query: 146 LCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVS 197
L A EM PNV++YT++IDG+ K G A + ++M + N V
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCK---QGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIR 253
+ +I L ++G ++A +++G M K ++ ++I G CK K++EA L++ +
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 254 CRDI----ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA-CAS---- 304
+ ++N +I + + ++A L +M G D++ + L A C +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 305 --LALLDQ-----------------------GRQTYAL-----VIKHGFDSDLSVNNALV 334
L L++Q G+ AL +I+ G D+ N+L+
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 335 TMYSKCGSIVDSELAF----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
K G ++ F + PD V++NT+I+ + L+ A + ++ G
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684
Query: 391 PDGITFLSLLS 401
P+ IT+ L++
Sbjct: 685 PNEITWSILIN 695
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 215 WELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS----WNIMITGYAQN 270
+++ R V ++ FC +VD A +L + + + ++I ++N
Sbjct: 189 YDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSEN 248
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
R EA+ L +M G +PD F + + + + + ++ F +D +
Sbjct: 249 NRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQ 308
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS-YFDQMIAVGV 389
L+ + G + ++ + P+ V +NT+I + + +A+ + M+ G
Sbjct: 309 GYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
PD TF ++ C+ G + ++ + MV G P Y L+D + G + A
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITYTILIDGFCKQGHFEEAS 427
Query: 450 EII 452
+++
Sbjct: 428 KVV 430
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
N I AF R I A ++ +M + D +T+N ++ A +G + L + M
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575
Query: 97 KNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCD 148
+ + S N ++ + +++A + M +R + +YN++I+G K GR +
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635
Query: 149 AQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR---RNEVSWTVM 201
A LF + P+ V+Y +I Y EG + LF + NE++W+++
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLISRYCY--EGLFNDACQLLFKGVSNGFIPNEITWSIL 693
Query: 202 INGLVE 207
IN V+
Sbjct: 694 INYFVK 699
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 115/439 (26%), Positives = 207/439 (47%), Gaps = 35/439 (7%)
Query: 44 IAAFSRAGNITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
I A S + A ++ ++M DV T+N ++ +G + L D M +++
Sbjct: 242 IHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF 301
Query: 100 VSWNAMVAGCVQNDM-----LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL-F 153
+ +A++ G + + + +DEA + +P N YN +I+G++ GR +A+ L +
Sbjct: 302 TA-DALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLY 360
Query: 154 KEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGL 205
K M P+ ++ +MIDG K G + A D M ++ N +++T++I+G
Sbjct: 361 KNMVIAGFEPDAFTFNIMIDGLCK---KGYLVSALEFLDEMVKKGFEPNVITYTILIDGF 417
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
+ G +EEA ++ M K N V +I CK GK+ +A ++ ++ + DI
Sbjct: 418 CKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDI 477
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++N +I G +N + EEAL L+ M+ G+ + + + +L A L L+ Q +
Sbjct: 478 YTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGE 537
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDS----ELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ G D N L+ K G+ E FG+ P I S N +I +F +
Sbjct: 538 MRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGK 597
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
A + MI G+ PD +T+ SL++ C+ G+ E++NLFN + GI P + Y
Sbjct: 598 VNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFN-GLQAKGIHPDAVTYN 656
Query: 434 CLVDVMSRAGQLQRACEII 452
L+ G AC+++
Sbjct: 657 TLISRYCYEGLFNDACQLL 675
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 193/442 (43%), Gaps = 69/442 (15%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ-----HSRAL 90
DV N I +AG I A ++ D+M +D T ++++ Y G + +RA+
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDF-TADALIQGYLMHGLCRMGKVDEARAM 327
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAF-----NYFAAMPERNAASYNAMISGFIKFGR 145
+P N V +N ++ G V + +EA N A E +A ++N MI G K G
Sbjct: 328 LSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGY 387
Query: 146 LCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVS 197
L A EM PNV++YT++IDG+ K G A + ++M + N V
Sbjct: 388 LVSALEFLDEMVKKGFEPNVITYTILIDGFCK---QGHFEEASKVVNSMSAKGLSLNTVG 444
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIR 253
+ +I L ++G ++A +++G M K ++ ++I G CK K++EA L++ +
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDML 504
Query: 254 CRDI----ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA-CAS---- 304
+ ++N +I + + ++A L +M G D++ + L A C +
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564
Query: 305 --LALLDQ-----------------------GRQTYAL-----VIKHGFDSDLSVNNALV 334
L L++Q G+ AL +I+ G D+ N+L+
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624
Query: 335 TMYSKCGSIVDSELAF----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
K G ++ F + PD V++NT+I+ + L+ A + ++ G
Sbjct: 625 NGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFI 684
Query: 391 PDGITFLSLLSVCCRAGKIDES 412
P+ IT+ L++ + + D S
Sbjct: 685 PNEITWSILINYFVKKHQRDNS 706
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/243 (18%), Positives = 100/243 (41%), Gaps = 6/243 (2%)
Query: 215 WELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS----WNIMITGYAQN 270
+++ R V ++ FC +VD A +L + + + ++I ++N
Sbjct: 189 YDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSEN 248
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
R EA+ L +M G +PD F + + + + + ++ F +D +
Sbjct: 249 NRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQ 308
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS-YFDQMIAVGV 389
L+ + G + ++ + P+ V +NT+I + + +A+ + M+ G
Sbjct: 309 GYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGF 368
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
PD TF ++ C+ G + ++ + MV G P Y L+D + G + A
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK-GFEPNVITYTILIDGFCKQGHFEEAS 427
Query: 450 EII 452
+++
Sbjct: 428 KVV 430
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 180/404 (44%), Gaps = 79/404 (19%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPM--KNVVSWNAMVAGC---------VQNDMLDEAFN 120
N++L Y P H+R LFD +P K+ V + A++ C +Q D +
Sbjct: 61 NALLHLYGSCSLPSHARKLFDEIPQSHKDSVDYTALIRHCPPFESLKLFIQMRQFDLPLD 120
Query: 121 YFAAMPERNAAS--------------YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
+ NA + + GF+KF ++C+A
Sbjct: 121 GVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNA----------------- 163
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
+++ YVK G + AR +F+ + R+ VSW+ + GLV+ E LF MP++N
Sbjct: 164 LMNVYVKF---GLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNE 220
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV-R 285
V +W +MI GY NG +EA L +MV
Sbjct: 221 V-------------------------------AWTVMIVGYVGNGFTKEAFLLLKEMVFG 249
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH-GFDSDLSVNNALVTMYSKCGSIV 344
G + + S+ +AC+ + GR + +K G D + V +LV MY+KCG I
Sbjct: 250 CGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRIN 309
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
+ F + ++V+WN ++ A H + A F M+ V+PDG+TF++LLS C
Sbjct: 310 AALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVE-EVKPDGVTFMALLSACS 368
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+G +++ + F+ + Y I P EHYAC+V ++ RAG+L+ A
Sbjct: 369 HSGLVEKGWDYFHDLEPVYRIKPEIEHYACMVGLLGRAGRLEEA 412
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 34/213 (15%)
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ--GRQTYALVIKHGFDSDLSVNNA 332
E+L LF QM + + D ++ V ACA L D G Q + V+K GF V NA
Sbjct: 104 ESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNA 163
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM-------- 384
L+ +Y K G + ++ F +VSW+ + + R FD+M
Sbjct: 164 LMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAW 223
Query: 385 ------------------------IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
G R +T S+LS C ++G + + V
Sbjct: 224 TVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAV 283
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ G+ LVD+ ++ G++ A + R
Sbjct: 284 KEMGLDFGVMVGTSLVDMYAKCGRINAALSVFR 316
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 186/402 (46%), Gaps = 54/402 (13%)
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI---------SGFIKFGRLCDAQRL 152
WN ++ ++ + E+F F M N + + S +K G++ + +
Sbjct: 185 WNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVV 244
Query: 153 FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
+ C + T ++ Y K+ + AR +F+ MP ++ V W +MI+ +G +
Sbjct: 245 ASNL-CKELTVNTALLSMYAKLD---SLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPK 300
Query: 213 EAWEL------------------------------FGRMPQKNVV---------ASTAMI 233
E+ EL +G+ V+ +++
Sbjct: 301 ESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLV 360
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ ++ A +F I+ R + SW+ MI GYA + EAL+LF +M +G + D +
Sbjct: 361 DMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLV 420
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ- 352
I +++ A A + L + +K DS S+ +L+ Y+KCG I + F +
Sbjct: 421 IVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEE 480
Query: 353 -TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+S DIV+WN++I A++ H +++ ++Q+ V+PD +TFL +L+ C +G +D+
Sbjct: 481 KSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDK 540
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+F MV YG P EH AC+VD++ RAG++ A +II
Sbjct: 541 GKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKIIE 582
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 183/411 (44%), Gaps = 69/411 (16%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
++ +++ ++ AR +F+KMP KDVV WN M++ Y SG P+ S L
Sbjct: 259 LSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELV-----------Y 307
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPE---------------------RNAASY-----NAMI 137
MV ++ DM F A+P RN + Y N+++
Sbjct: 308 CMVRSGIRPDM-------FTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLV 360
Query: 138 SGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR-NEV 196
+ L A+++F + VVS++ MI GY A +LF M +V
Sbjct: 361 DMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAM---HDNCLEALSLFIEMKLSGTKV 417
Query: 197 SWTVMINGL---VENGLYEEAWELFGRMPQKNVVA----STAMITGFCKQGKVDEAWTLF 249
++IN L + G L G + N+ + T+++ + K G ++ A LF
Sbjct: 418 DLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLF 477
Query: 250 QQIRC--RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
+ + +DI +WN MIT Y+ +G + L++Q+ + ++PD + F+ + TAC + L
Sbjct: 478 NEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGL 537
Query: 308 LDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ--PDIVSWNTI 364
+D+G++ + +V +GF N +V + + G I D +T+Q D + +
Sbjct: 538 VDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKI-DEARKIIETNQLNSDARVYGPL 596
Query: 365 IAAFAQHVLYYKARSYFDQMIA---VGVRPDGITFLSLLS-VCCRAGKIDE 411
++A H L + F ++ A + + P+ LLS + AGK D+
Sbjct: 597 LSACKMHGL----ETDFAELAAEKLIKMEPENPANYVLLSNIFAAAGKWDK 643
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 130/232 (56%), Gaps = 3/232 (1%)
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+F M + +V + T MI G+ K G VD A LF ++ +++ +W+ MI GY +N ++A
Sbjct: 40 IFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKA 99
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+ +F ++ G+ ++ V +ACA L L G + Y I+ D ++ + A+V M
Sbjct: 100 VEIFEILIDEGLVANE---VGAVSACAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDM 156
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y++CG++ + F + + D++SW ++I+ A H +A YF M+ G+ P ITF
Sbjct: 157 YARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGIVPRDITF 216
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
++L G +++ +F M DY + PR EHY C+VD++ RAG+L+ A
Sbjct: 217 TAVLKAYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEA 268
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 123/247 (49%), Gaps = 19/247 (7%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQ 111
++ AA+ +F M DV +W M+ Y+ G +R LFD MP+KN+V+W+ M+ G ++
Sbjct: 33 DLMAAKCIFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLR 92
Query: 112 NDMLDEAFNYFAAMPERN-AASYNAMISGFIKFGRLCDAQRLFKEMPCP----NVVSYTV 166
N+ D+A F + + A+ +S G L ++ ++ NV+ T
Sbjct: 93 NNCFDKAVEIFEILIDEGLVANEVGAVSACAHLGALAAGEKAYEHAIRINLDLNVILGTA 152
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
++D Y + G + +A +F+ M ++ +SWT +I+G+ +G EEA E F M + +
Sbjct: 153 IVDMYARC---GNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNGI 209
Query: 227 VAS----TAMITGFCKQGKVDEAWTLFQQIRCRD------IASWNIMITGYAQNGRGEEA 276
V TA++ + G V++ +F+ ++ RD + + M+ + G+ EEA
Sbjct: 210 VPRDITFTAVLKAYSHGGLVEKGQEIFESMK-RDYRLEPRLEHYGCMVDLLGRAGKLEEA 268
Query: 277 LNLFSQM 283
N +M
Sbjct: 269 ENFILEM 275
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 125/229 (54%), Gaps = 17/229 (7%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
NV +++I+ + + G + +A+ +F ++ R++ SW +I G+AQ R + L LF +M
Sbjct: 142 NVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRMR 201
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
++P+ + SL +AC L GR + +I+ GF L V NAL+ MYSKCG IV
Sbjct: 202 GLELKPNYFTYTSLLSACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGVIV 261
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
D+ F D+V+WN++I M +GV PD +TFL +LS C
Sbjct: 262 DALYIFENMVSKDVVTWNSMIVG----------------MRIMGVNPDAVTFLGILSSCR 305
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G + E F+ MV D+G+ P +HY+C+VD++ RAG L A + I+
Sbjct: 306 HGGLVKEGQVYFSSMV-DHGLQPELDHYSCIVDLLGRAGLLLEALDFIQ 353
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Query: 292 DLIFVS-LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
D+ F+S + C S G Q + L I+ GF +++ V ++L+++YS+CG + D+ F
Sbjct: 107 DVCFLSHALSLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVF 166
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
+ S ++VSW IIA FAQ F +M + ++P+ T+ SLLS C +G +
Sbjct: 167 DEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSGAL 225
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 21/139 (15%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
++ N IA +S+ G I A +F+ M +KDVVTWNSM+ G
Sbjct: 244 LHVENALIAMYSKCGVIVDALYIFENMVSKDVVTWNSMIVGMRIMGVN------------ 291
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAM------PERNAASYNAMISGFIKFGRLCDAQ 150
+ V++ +++ C ++ E YF++M PE + Y+ ++ + G L +A
Sbjct: 292 PDAVTFLGILSSCRHGGLVKEGQVYFSSMVDHGLQPELD--HYSCIVDLLGRAGLLLEAL 349
Query: 151 RLFKEMP-CPNVVSYTVMI 168
+ MP CPN V + ++
Sbjct: 350 DFIQNMPVCPNAVIWGSLL 368
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 20/185 (10%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQN---DMLDEAFNYFA 123
+V +S+++ Y G + +FD M ++NVVSW A++AG Q DM E F
Sbjct: 142 NVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRMR 201
Query: 124 AMPER-NAASYNAMI-----SGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
+ + N +Y +++ SG + GR Q + C V +I Y K
Sbjct: 202 GLELKPNYFTYTSLLSACMGSGALGHGRGVHCQIIQMGFHCYLHVE-NALIAMYSKC--- 257
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFC 237
G I A +F+ M ++ V+W MI G+ G+ +A G + S+ G
Sbjct: 258 GVIVDALYIFENMVSKDVVTWNSMIVGMRIMGVNPDAVTFLG-------ILSSCRHGGLV 310
Query: 238 KQGKV 242
K+G+V
Sbjct: 311 KEGQV 315
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 180/368 (48%), Gaps = 42/368 (11%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF-IKFGRLCDAQRLFKEM 156
N++ ++ C + ++ A N F +P+ ++ +N MI GF +A FK M
Sbjct: 43 NLILSGKIIMFCAVSQNMNYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRM 102
Query: 157 PC---PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
P+ +++ ++ K+ IAR R V + + L++
Sbjct: 103 QLAHRPDNFTFSFIL----KI-----IARLRF--------------VNLGKQLHCSLFK- 138
Query: 214 AWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
FG V S + G K ++ A LF+++ ++ SWN +I + G+
Sbjct: 139 ----FGFENHTYVRNSLIHMYGMLKD--IEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKY 192
Query: 274 EEALNLFSQMVR---TGM--QPDDLIFVSLFTACASLALLDQGRQTYALVIK--HGFDSD 326
EA++LF++MV+ GM QPD V +AC ++ LD GR+ ++ V + F
Sbjct: 193 NEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGES 252
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+SV NALV MY+KCG++ ++ F + ++VSWN +I FA H +A + F +M+
Sbjct: 253 ISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLH 312
Query: 387 VGV-RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
V RPD ITFL +L C G +DE F +M DY I P +HY C+VD++ RAG
Sbjct: 313 ENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLF 372
Query: 446 QRACEIIR 453
A E+I+
Sbjct: 373 VEAYELIK 380
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 39/347 (11%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHS------RALFDAMPMKNVVSWNAM 105
N+ A VFDK+P D WN+M+ + +S H+ R P S+
Sbjct: 59 NMNYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHRPDNFTFSFILK 118
Query: 106 VAGCVQNDMLDEAFN--YFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS 163
+ ++ L + + F E + N++I + + A +LF+EM PN+VS
Sbjct: 119 IIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVS 178
Query: 164 YTVMIDGYVKVKEGGGIARARALFDAMPRR---------NEVSWTVMINGLVENGLYEEA 214
+ +ID +V G A LF M ++ + + V ++ G +
Sbjct: 179 WNSIIDCHVYC---GKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLD-- 233
Query: 215 WELFGRMPQ-----------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
FGR +++ A++ + K G V+EA+ F ++ +++ SWN+M
Sbjct: 234 ---FGRKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVM 290
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQ-PDDLIFVSLFTACASLALLDQGRQTYALVIK-H 321
I G+A +G GEEAL LF++M+ ++ PD++ F+ + AC+ L+D+GR+ + ++ + +
Sbjct: 291 ILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDY 350
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAA 367
+ +V + + G V++ EL + + + W T++AA
Sbjct: 351 NIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAA 397
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 128/302 (42%), Gaps = 46/302 (15%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER--- 128
NS++ Y + + LF+ M N+VSWN+++ V +EA + F M ++
Sbjct: 149 NSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHN 208
Query: 129 ------NAASYNAMIS-----GFIKFGR-----LCDAQRLFKEMPCPNVVSYTVMIDGYV 172
+ A+ +S G + FGR + D F E ++ + ++D Y
Sbjct: 209 GMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGE----SISVFNALVDMYA 264
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAM 232
K G + A F M R+N VSW VMI G +G EEA LF RM +NV
Sbjct: 265 KC---GAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDE- 320
Query: 233 ITGFC------KQGKVDEAWTLFQQIRCRD------IASWNIMITGYAQNGRGEEALNLF 280
IT C G VDE F +I RD I + M+ + G EA L
Sbjct: 321 ITFLCVLCACSHGGLVDEGRRYF-EIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELI 379
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV-TMYSK 339
M ++ + +I+ +L AC + ++ G + +++ + D S + L+ MY+
Sbjct: 380 KSM---PVECNAIIWRTLLAACRNYGNVELGEKVRKHLME--LEPDHSSDYVLLANMYAS 434
Query: 340 CG 341
G
Sbjct: 435 TG 436
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 99/252 (39%), Gaps = 60/252 (23%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQH 86
+F F ++ R +L I + +I A Q+F++M ++V+WNS++ + + G
Sbjct: 136 LFKFGFENHTYVRNSL-IHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNE 194
Query: 87 SRALFDAMPMK----------------------------------------------NVV 100
+ LF M + ++
Sbjct: 195 AIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESIS 254
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN 160
+NA+V + ++EA+ F+ M +N S+N MI GF G +A LF M N
Sbjct: 255 VFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHEN 314
Query: 161 V-----VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV-----MINGLVENGL 210
V +++ ++ GG + R F+ M R + T+ M++ L GL
Sbjct: 315 VERPDEITFLCVL---CACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGL 371
Query: 211 YEEAWELFGRMP 222
+ EA+EL MP
Sbjct: 372 FVEAYELIKSMP 383
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
+ +++ G + A + F M K+VV+WN M+ + G + + ALF M +NV
Sbjct: 260 VDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPD 319
Query: 100 -VSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGRLCDAQRLF 153
+++ ++ C ++DE YF M + Y M+ + G +A L
Sbjct: 320 EITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELI 379
Query: 154 KEMP--CPNVVSYTVM 167
K MP C ++ T++
Sbjct: 380 KSMPVECNAIIWRTLL 395
>Medtr8g063450.1 | PPR containing plant-like protein | HC |
chr8:26602939-26605163 | 20130731
Length = 699
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/442 (26%), Positives = 203/442 (45%), Gaps = 43/442 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V+ + + +++ G + A VF MP + V+WN+++ Y G + L
Sbjct: 134 NVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQE 193
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----------ERNAASYNAMISGFIKFGR 145
++ V + V+ + +LD Y M E NA+I+ + +
Sbjct: 194 LEGVGIDDGTVSPLLT--LLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCS 251
Query: 146 LCDAQRLF---KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSW 198
L DA+R+F + C ++V++ M+ Y+ K+ A +F M ++ S+
Sbjct: 252 LQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKEN---LAFDVFIEMQSFGFEPDDYSY 308
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVAST-------AMITGFCKQGKVDEAWTLFQQ 251
T +I+G L G + ++ S AM GF + +++A +F
Sbjct: 309 TGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC-MEDALRIFFS 367
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+ +D +WN ++ GY Q GR E+AL LF Q+ ++ DD F ++ C+ LA L G
Sbjct: 368 MDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATLQLG 427
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
+Q + L +K GFD++ V D++ F TS + + WN+II +AQH
Sbjct: 428 QQVHVLSLKVGFDTNKYVGK-------------DAKKCFETTSNDNAIIWNSIIFGYAQH 474
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
A F M V+PD ITF+++L+ C G ++E + M D+GIP R EH
Sbjct: 475 GQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEH 534
Query: 432 YACLVDVMSRAGQLQRACEIIR 453
YAC VD+ RAG L+ ++
Sbjct: 535 YACAVDLYGRAGYLEEGKALVE 556
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 192/409 (46%), Gaps = 38/409 (9%)
Query: 22 THFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHS 81
TH L + K S D+Y +N I A+S+ + A Q+FDKMP +D V+WN++++ Y ++
Sbjct: 21 THCLAI--KSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNT 78
Query: 82 GFPQHSRALFDAMPMKNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASY 133
+ L +AM + ++ + + G + L+ + M + N S
Sbjct: 79 ADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSG 138
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
+A++ + K GR+ DA +F+ MP N VS+ +I GY +V G + A L R
Sbjct: 139 SALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRV---GDLDMAFWLM----RC 191
Query: 194 NEVSWTVMINGLVENGL--------YEEAWELFGRMPQKNV----VASTAMITGFCKQGK 241
E+ + +G V L Y +L ++ + + + A+IT + +
Sbjct: 192 QELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCS 251
Query: 242 VDEAWTLF---QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
+ +A +F + CRD+ +WN M+ Y + + A ++F +M G +PDD + +
Sbjct: 252 LQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGV 311
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY----SKCGSIVDSELAFGQTS 354
+ C+ +G + LVIK G + + V+NAL+ MY ++C + D+ F
Sbjct: 312 ISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGFDNRC--MEDALRIFFSMD 369
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
D +WN+++A + Q A F Q+ ++ V D TF +++ C
Sbjct: 370 VKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCC 418
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
T+ L IK G SDL +N L+T YSKC + + F + Q D VSWN +I+ +
Sbjct: 21 THCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTAD 80
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
+ M G D TF S L RA +++ L ++M+ + +
Sbjct: 81 LDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELGQQLHSVMI-KMRLNENVFSGS 139
Query: 434 CLVDVMSRAGQLQRACEIIR 453
L+D+ ++ G++ A + R
Sbjct: 140 ALLDMYAKCGRVDDALVVFR 159
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 122/225 (54%), Gaps = 3/225 (1%)
Query: 231 AMITGFCKQGKVDEAWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
AMI + K G V A LF + R +D+ SW MI+GY Q EA+ LF +M +
Sbjct: 181 AMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENV 240
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
+PD++ +++ +ACA L L G + + KH + + N+L+ MY+K G+I +
Sbjct: 241 KPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALE 300
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAG 407
F I++W T+IA A H L +A F M V+P+ +TF+++LS C G
Sbjct: 301 LFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVG 360
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
++ + F M YGI P+ EHY C++D++ RAG LQ A E++
Sbjct: 361 LVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMV 405
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 126/266 (47%), Gaps = 48/266 (18%)
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE--VSWTVMIN 203
+C A++LF E V MI YVKV G ++ AR LFD+M R++ SWT MI+
Sbjct: 162 VCSARKLFDEFGGNGCV-LNAMIVAYVKV---GDVSNARKLFDSMLERDKDVFSWTAMIS 217
Query: 204 GLVENGLYEEAWELFGRMPQKNVVAS---------------------------------- 229
G + EA +LF RM +NV
Sbjct: 218 GYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSK 277
Query: 230 -----TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
++I + K G + +A LF+ ++ + I +W MI G A +G G+EAL +FS M
Sbjct: 278 IVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVFSCME 337
Query: 285 RTG-MQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGS 342
+ ++P+++ F+++ +AC+ + L++ GR + ++ ++G + + ++ + + G
Sbjct: 338 KEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGH 397
Query: 343 IVDS-ELAFGQTSQPDIVSWNTIIAA 367
+ ++ E+ + + W +++AA
Sbjct: 398 LQEAKEMVLRMPFEANAAIWGSLLAA 423
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 110/255 (43%), Gaps = 38/255 (14%)
Query: 41 NLNIAAFSRAGNITAARQVFDKM--PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKN 98
N I A+ + G+++ AR++FD M KDV +W +M++ Y + P + LF M ++N
Sbjct: 180 NAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLEN 239
Query: 99 VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
V + + +A + A I +I + +L K +P
Sbjct: 240 VKPDEIAILAVL------------SACADLGALHLGEWIHNYI------EKHKLSKIVPL 281
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
Y +ID Y K G I +A LF+ M + ++WT MI GL +GL +EA +F
Sbjct: 282 -----YNSLIDMYAK---SGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVF 333
Query: 219 GRMPQK-----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYA 268
M ++ N V A+++ G V+ F +R R I + MI
Sbjct: 334 SCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLG 393
Query: 269 QNGRGEEALNLFSQM 283
+ G +EA + +M
Sbjct: 394 RAGHLQEAKEMVLRM 408
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 10/138 (7%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
KH S V N I ++++GNI A ++F+ M K ++TW +M+ G + +
Sbjct: 272 KHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALR 331
Query: 90 LFDAMPMK-----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISG 139
+F M + N V++ A+++ C +++ +YF +M R Y MI
Sbjct: 332 VFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDL 391
Query: 140 FIKFGRLCDAQRLFKEMP 157
+ G L +A+ + MP
Sbjct: 392 LGRAGHLQEAKEMVLRMP 409
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 128/220 (58%), Gaps = 2/220 (0%)
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+ K GK+ EA T+F+ + RD+ S +I+GYAQ G EEAL LF ++ GM+ + + +
Sbjct: 2 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 61
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
+ TA + LA LD G+Q + V++ S + + N+L+ MYSKCG++ S F +
Sbjct: 62 TGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYE 121
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQM-IAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
++SWN ++ +++H + F M V+PD +T L++LS C G D+ +N
Sbjct: 122 RTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLN 181
Query: 415 LFNLMVH-DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+FN M + P+ EHY C+VD++ R+G+++ A E I+
Sbjct: 182 IFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIK 221
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 103/237 (43%), Gaps = 43/237 (18%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMI 233
G I AR +F+ +P R+ VS T +I+G + GL EEA ELF R+ + N V T ++
Sbjct: 6 GKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVL 65
Query: 234 TG-----------------------------------FCKQGKVDEAWTLFQQIRCRDIA 258
T + K G + + +F + R +
Sbjct: 66 TALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVI 125
Query: 259 SWNIMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SWN M+ GY+++G G E L LF+ M T ++PD + +++ + C+ L D+G +
Sbjct: 126 SWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFND 185
Query: 318 VIKHGFDSDLSVNN--ALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ + + + + +V + + G + ++ E +P W +++ A H
Sbjct: 186 MSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 242
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 114/277 (41%), Gaps = 40/277 (14%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
+++ G I AR VF+ +P +DVV+ ++++ Y G + + LF + + + S
Sbjct: 2 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTY 61
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
G + A + AA+ G+ L E+P VV
Sbjct: 62 TGVLT------ALSGLAAL----------------DLGKQVHNHVLRSEIP-SFVVLQNS 98
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK-- 224
+ID Y K G + +R +FD M R +SW M+ G ++G E +LF M ++
Sbjct: 99 LIDMYSKC---GNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETK 155
Query: 225 ---NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI------ASWNIMITGYAQNGRGEE 275
+ V A+++G G D+ +F + I + ++ ++GR EE
Sbjct: 156 VKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEE 215
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
A +M +P I+ SL AC + +D G
Sbjct: 216 AFEFIKKMP---FEPTAAIWGSLLGACRVHSNVDIGE 249
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 18/219 (8%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H V S+ V + +L I +S+ GN+T +R++FD M + V++WN+ML Y
Sbjct: 81 HNH---VLRSEIPSFVVLQNSL-IDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSK 136
Query: 81 SGFPQHSRALFDAMPMKNVVSWN-----AMVAGCVQNDMLDEAFNYFAAMP------ERN 129
G + LF M + V + A+++GC + D+ N F M E
Sbjct: 137 HGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPK 196
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR--ARALF 187
Y ++ + GR+ +A K+MP + + G +V I + L
Sbjct: 197 MEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLL 256
Query: 188 DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
+ P N ++ ++ N G +E+ L M +K V
Sbjct: 257 EIEP-GNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTV 294
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 166/336 (49%), Gaps = 35/336 (10%)
Query: 115 LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV 174
L+ + F M R+ ++N ++S F++ G+ +A R+ +EM NV + +K
Sbjct: 109 LNSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKC 168
Query: 175 KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMIT 234
A +AL + ++GLV M + VV STA+I
Sbjct: 169 -----CASLKAL----------EFGRQVHGLVV------------AMGRDLVVLSTALID 201
Query: 235 GFCKQGKVDEAWTLFQQIRC-RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ G V A +F ++ +D N +++G +NGR EA + S + +P+ +
Sbjct: 202 FYSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYREAFKVMSLV-----KPNAV 256
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
S+ C+ + L G+Q + + ++ GF + + N L+ MY+KCG I+ + F
Sbjct: 257 ALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSVFDGI 316
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG--VRPDGITFLSLLSVCCRAGKIDE 411
Q D++SW +I + ++ Y+A F +M+ G V P+ +TFLS+LS C +G ++E
Sbjct: 317 FQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPNSVTFLSVLSACGHSGLVEE 376
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
FN+M YGI P EHYAC +D++ RAG+++
Sbjct: 377 GKQCFNIMKEKYGIDPEPEHYACFIDILGRAGKIEE 412
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 156/385 (40%), Gaps = 105/385 (27%)
Query: 11 LKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVT 70
L+P+P+S + H ++ S A L++ +SR G++ ++ +VFD+M +DVV
Sbjct: 69 LRPSPTSLGKQLHSQMIKTGSDSGTVPKTALLDM--YSRHGSLNSSLKVFDEMLHRDVVA 126
Query: 71 WNSMLTAYWHSGFPQHSRALFDAMPMKN-------------------------------- 98
WN++L+ + G P + + M +N
Sbjct: 127 WNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVV 186
Query: 99 ------VVSWNAMV-----AGCVQNDMLDEAFNYFAAMPE-RNAASYNAMISGFIKFGRL 146
VV A++ GCV + A N F + ++ +N+++SG IK GR
Sbjct: 187 AMGRDLVVLSTALIDFYSSVGCVHH-----ALNVFYGLKGWKDDMIHNSLVSGCIKNGRY 241
Query: 147 CDAQRLFKEMPC--PNVVSYT-----------------------------------VMID 169
+A FK M PN V+ T V++D
Sbjct: 242 REA---FKVMSLVKPNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNVLLD 298
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----- 224
Y K G I +A ++FD + +++ +SWT MI+G NG EA ELF +M +
Sbjct: 299 MYAKC---GKILQAWSVFDGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVL 355
Query: 225 -NVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALN 278
N V ++++ G V+E F ++ + + + I + G+ EE +
Sbjct: 356 PNSVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDPEPEHYACFIDILGRAGKIEEVWS 415
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACA 303
+ M+ G P +++SL AC+
Sbjct: 416 AYQNMIDQGTSPTAGVWISLLNACS 440
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 114/228 (50%), Gaps = 16/228 (7%)
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
V TA++ + + G ++ + +F ++ RD+ +WN +++ + + G+ +EA+ + +M R
Sbjct: 93 TVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGR 152
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
++ + S+ CASL L+ GRQ + LV+ G D + ++ AL+ YS G +
Sbjct: 153 ENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMGRDL-VVLSTALIDFYSSVGCVHH 211
Query: 346 S-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
+ + +G D + N++++ ++ Y R F M V+P+ + S+L VCC
Sbjct: 212 ALNVFYGLKGWKDDMIHNSLVSGCIKNGRY---REAFKVMSL--VKPNAVALTSVL-VCC 265
Query: 405 RAGKIDESMNLFNLMVH----DYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ES L VH G ++ L+D+ ++ G++ +A
Sbjct: 266 S----EESDLLTGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQA 309
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 4/171 (2%)
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
Q+ R I+ N +IT Y + G A NLF + R + D F L +
Sbjct: 20 HQLLHRPISELNSLITSYIRRGHPISAFNLFLSLRRIRIDLDSHTFTPLLRPSPT----S 75
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFA 369
G+Q ++ +IK G DS AL+ MYS+ GS+ S F + D+V+WNT+++ F
Sbjct: 76 LGKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFL 135
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
+ +A +M V T S+L C ++ + L+V
Sbjct: 136 RCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVV 186
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 148/316 (46%), Gaps = 40/316 (12%)
Query: 178 GGIARARALFDAMPRRNE-VSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS------- 229
G I AR +FD P RN+ VSW +++ G V Y ++LF + + AS
Sbjct: 158 GRIDDARKVFDECPERNDLVSWNILMGGCVLVSDYSFVFDLFLKRGCSGIRASVATTLSL 217
Query: 230 --------------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDI 257
TA+I + K G + A +F + +D+
Sbjct: 218 LSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDV 277
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
WN +I YA++ EEA+ L M + G++P+ V L + ++ + R +L
Sbjct: 278 VLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSL 337
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+ + + D+ + ALV +Y+KCG + ++ F + D+ SW +I+ H A
Sbjct: 338 IEEEKLELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVISGHGIHGQAINA 397
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
S F++M G RP+ ITFL++L+ C G + E + F MV ++G P EHY CL+D
Sbjct: 398 ISLFNRMENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGFSPWVEHYGCLID 457
Query: 438 VMSRAGQLQRACEIIR 453
++ RAG L A E+I+
Sbjct: 458 LLGRAGMLHEAFELIK 473
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 158/350 (45%), Gaps = 53/350 (15%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKN-VVSWNAMVAGCVQNDMLDEAFNYF----AAMP 126
N++L Y G +R +FD P +N +VSWN ++ GCV F+ F +
Sbjct: 148 NTILQFYCVCGRIDDARKVFDECPERNDLVSWNILMGGCVLVSDYSFVFDLFLKRGCSGI 207
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRL----FKEMPCPNVVSYTVMIDGYVKVKEGGGIAR 182
+ A+ +++S G + L K C N+ T +ID Y K G I
Sbjct: 208 RASVATTLSLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKT---GCIYL 264
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------------ 224
AR +FD + ++ V W +I + L EEA L M Q+
Sbjct: 265 ARKVFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSA 324
Query: 225 ---------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
+V+ TA++ + K G +DEA +F+++ +D+ SW +
Sbjct: 325 SGSMQGVRYVTSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAV 384
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA-LVIKHG 322
I+G+ +G+ A++LF++M G +P+++ F+++ TAC+ L+ +G + + +V +HG
Sbjct: 385 ISGHGIHGQAINAISLFNRMENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHG 444
Query: 323 FDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
F + L+ + + G + ++ EL + D SW T+++A H
Sbjct: 445 FSPWVEHYGCLIDLLGRAGMLHEAFELIKSLPIKGDATSWRTLLSACRVH 494
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 139/316 (43%), Gaps = 17/316 (5%)
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
A +F + PN+ Y M+ GY +A +F+ + RN + + +
Sbjct: 62 ASTIFTCIQNPNLFMYNTMLRGYSVSNSSN---KALPIFNKL--RNSGNGLDPFSFIAVM 116
Query: 209 GLYEEAWEL-FGRMPQKNVVAS---------TAMITGFCKQGKVDEAWTLFQQIRCR-DI 257
++E+ FGR VV S ++ +C G++D+A +F + R D+
Sbjct: 117 KACGRSFEVGFGRGVHGIVVKSGNRFFVDLNNTILQFYCVCGRIDDARKVFDECPERNDL 176
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SWNI++ G +LF + +G++ +SL +A + G+ +
Sbjct: 177 VSWNILMGGCVLVSDYSFVFDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSLHGY 236
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
IK GF +L+V AL+ MY+K G I + F + D+V WN +I +A+ L +A
Sbjct: 237 CIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARSCLVEEA 296
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
+ M GV+P+ T + LLSV +G + + + ++ + + LVD
Sbjct: 297 VALLQSMRQEGVKPNSSTLVGLLSVYSASGSM-QGVRYVTSLIEEEKLELDVILGTALVD 355
Query: 438 VMSRAGQLQRACEIIR 453
V ++ G L A EI
Sbjct: 356 VYAKCGFLDEAMEIFE 371
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 129/303 (42%), Gaps = 38/303 (12%)
Query: 26 LVFAKHFSSYDV---YRANLNIAA-----FSRAGNITAARQVFDKMPTKDVVTWNSMLTA 77
V K Y + + NLN+ +++ G I AR+VFD + KDVV WN ++
Sbjct: 227 FVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKN 286
Query: 78 YWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCV-----QNDMLDEAFNYFAAMPERNAAS 132
Y S + + AL +M + V ++ + G + M + Y ++ E
Sbjct: 287 YARSCLVEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSM--QGVRYVTSLIEEEKLE 344
Query: 133 YN-----AMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
+ A++ + K G L +A +F+ M +V S+T +I G+ G A +LF
Sbjct: 345 LDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVISGH---GIHGQAINAISLF 401
Query: 188 DAMP----RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKN-----VVASTAMITGFCK 238
+ M R NE+++ ++ GL E E F RM Q++ V +I +
Sbjct: 402 NRMENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGFSPWVEHYGCLIDLLGR 461
Query: 239 QGKVDEAWTLFQQIRCR-DIASWNIMITGYAQNGR---GEEALNLFSQMVRTGMQPDDLI 294
G + EA+ L + + + D SW +++ +G GE ++ S P D +
Sbjct: 462 AGMLHEAFELIKSLPIKGDATSWRTLLSACRVHGDVKLGECVKDVLSNFYTP--HPTDSL 519
Query: 295 FVS 297
+S
Sbjct: 520 LIS 522
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 203/445 (45%), Gaps = 67/445 (15%)
Query: 61 DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFN 120
D +P + N ++ Y + + LF + ++VSWNAM++G QN ++A N
Sbjct: 251 DHLPLR-----NGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQN 305
Query: 121 YFAAM--PERNAASYN--AMISGF-----IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGY 171
F + +N +S A++S + FG+ +L +++T++++
Sbjct: 306 LFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLK-----SGFLNHTLLVNSL 360
Query: 172 VK--VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----- 224
++ + G + L + + SW +I G V ++EA E F M Q
Sbjct: 361 MQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLMRQGPSFNY 420
Query: 225 ------NVVASTAMITGFCKQGKVDEAWTLFQQI---------------RCRDIAS---- 259
NV+++ A I QGK + L RCRDI S
Sbjct: 421 DSITLVNVLSAVANIE-LLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKV 479
Query: 260 -----------WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
WN MI+ + N EAL LF + +P++ VS+ +AC + +L
Sbjct: 480 FKFHSISNLCTWNCMISALSHNKESREALELFRHL---QFKPNEFTIVSVLSACTRIGVL 536
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
G+Q + ++G+ + ++ ALV +YS CG + D+ + + SQ +WN++IAA+
Sbjct: 537 IHGKQVHGYTFRYGYQQNSFISAALVDLYSTCGRL-DNAVKVFRHSQKSESAWNSMIAAY 595
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
H KA F +M +G++ TF+SLLS C +G +++ + + M+ YGI P
Sbjct: 596 GNHGNGEKAIELFHEMCDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECMLEKYGIKPE 655
Query: 429 SEHYACLVDVMSRAGQLQRACEIIR 453
+EH +V++++R+G++ A + +
Sbjct: 656 AEHQVYVVNMLARSGRIDEAYQFTK 680
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 197/448 (43%), Gaps = 65/448 (14%)
Query: 62 KMPTKD---VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEA 118
K+ KD V NS+++ Y + +F M K++VSWNAM+ G N+ + EA
Sbjct: 141 KLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEA 200
Query: 119 FNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV---MIDGYVKVK 175
F+ M + + I LC L++E + Y + M+ ++ ++
Sbjct: 201 FDLMVEM--QTTGCFQPDIVTLTTMLPLCAELMLYREGR--TIHGYAIRRHMVPDHLPLR 256
Query: 176 EG--------GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM--PQKN 225
G + +A LF + + + VSW MI+G +N YE+A LF + +N
Sbjct: 257 NGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQN 316
Query: 226 VVAST-------------------------------------AMITGFCKQGKVDEAWTL 248
+ST +++ + G + +++
Sbjct: 317 CSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSI 376
Query: 249 FQQ-IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG--MQPDDLIFVSLFTACASL 305
Q+ DIASWN +I G + + +EAL F ++R G D + V++ +A A++
Sbjct: 377 LQENSSIADIASWNTIIVGCVRGDQFQEALETF-MLMRQGPSFNYDSITLVNVLSAVANI 435
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
LL+QG+ ++L +K F SD V N+L+TMY +C I + F S ++ +WN +I
Sbjct: 436 ELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMI 495
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+A + + ++R + + +P+ T +S+LS C R G + + YG
Sbjct: 496 SALSHN---KESREALELFRHLQFKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFR-YGY 551
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEIIR 453
S A LVD+ S G+L A ++ R
Sbjct: 552 QQNSFISAALVDLYSTCGRLDNAVKVFR 579
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 150/292 (51%), Gaps = 19/292 (6%)
Query: 134 NAMISGFIKFGRL--CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM- 190
NA+I+ + K G + D++ LF+EM +VVS+ ++ G + G + ++ F M
Sbjct: 49 NALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLY---NGDLEKSLCYFRRMN 105
Query: 191 ---PRRNEVSWTVMINGLVENG-------LYEEAWELFGRMPQKNVVASTAMITGFCKQG 240
R + VS + I+ G ++ + +L G V + ++I+ + +
Sbjct: 106 FSEERADHVSLSCAISACSSLGELAFGECIHGQGIKL-GYKDNSFVSVANSLISLYSQCE 164
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLF 299
VD A T+F+++ +DI SWN M+ GYA N EA +L +M TG QPD + ++
Sbjct: 165 AVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTML 224
Query: 300 TACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDI 358
CA L L +GR + I+ H L + N L+ MYSKC + +EL F T+Q D+
Sbjct: 225 PLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDL 284
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
VSWN +I+ ++Q+ Y KA++ F +++ G T ++LS C A ++
Sbjct: 285 VSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLN 336
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 175/407 (42%), Gaps = 58/407 (14%)
Query: 67 DVVTWNSMLTAYWHSG--FPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAA 124
D+ N+++ Y G S LF+ M K+VVSWN+++ GC+ N L+++ YF
Sbjct: 44 DISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRR 103
Query: 125 M---PER-NAASYNAMISGFIKFGRL---------------------------------C 147
M ER + S + IS G L C
Sbjct: 104 MNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQC 163
Query: 148 DA----QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP-----RRNEVSW 198
+A + +F+EM ++VS+ M++GY + I A L M + + V+
Sbjct: 164 EAVDVAETVFREMAYKDIVSWNAMMEGYASNEN---IHEAFDLMVEMQTTGCFQPDIVTL 220
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVAS-----TAMITGFCKQGKVDEAWTLFQQIR 253
T M+ E LY E + G ++++V +I + K V++A LF
Sbjct: 221 TTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTA 280
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
D+ SWN MI+GY+QN E+A NLF +++ G ++ ++C S L+ G+
Sbjct: 281 QIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKS 340
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHV 372
+ +K GF + + N+L+ MY G + + +S DI SWNTII +
Sbjct: 341 VHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGD 400
Query: 373 LYYKARSYFDQM-IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
+ +A F M D IT +++LS +++ +L +L
Sbjct: 401 QFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSL 447
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M++ + D + + + + L QGR + + IK G D+S+ NAL+ MY+KCG
Sbjct: 1 MIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGD 60
Query: 343 I--VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
+ DSE F + D+VSWN+I+ + K+ YF +M R D ++ +
Sbjct: 61 VNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAI 120
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIP 426
S C G++ F +H GI
Sbjct: 121 SACSSLGEL-----AFGECIHGQGIK 141
>Medtr4g087150.2 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 576
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 175/379 (46%), Gaps = 52/379 (13%)
Query: 53 ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQ- 111
I A VF+++ ++ V W+ ML Y + +F+ MP+++VV+W +++G +
Sbjct: 154 IREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKR 213
Query: 112 NDMLDEAFNYFAAMPE---------------RNAASYNAMISGFIKFGRLC--------- 147
D + A + F M R A + G + G LC
Sbjct: 214 EDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHG-LCIKDGFDFDN 272
Query: 148 -----------------DAQRLFKEM---PCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
DA+R+++ M C NV +I G V + G + A +F
Sbjct: 273 SVSSALAEFYCVSDAVDDAKRVYESMVGEACSNVAD--SLIGGLVSM---GRVKEAGMIF 327
Query: 188 DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWT 247
+ + +S +MI G +G ++++ +LF +M K++ + MIT + K G++DEA
Sbjct: 328 YGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTMITVYSKNGELDEAVK 387
Query: 248 LFQQIRC-RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
LF + + R+ +WN M++GY NG EAL L+ M R ++ F LF ACA L
Sbjct: 388 LFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLC 447
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
QG+ +A + K + ++ V ALV YSKCG + D++ +F P++ +W +I
Sbjct: 448 SFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSIFSPNVAAWTALIN 507
Query: 367 AFAQHVLYYKARSYFDQMI 385
+A H +A S F M+
Sbjct: 508 GYAYHGCGSEAISRFRSML 526
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 201/473 (42%), Gaps = 83/473 (17%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
V N++IA ++ G + AR +FD+MP + V +WN+M++ Y G + L M
Sbjct: 37 VISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHS 96
Query: 97 K----NVVSWNAMVAGC-----------------------------------VQNDMLDE 117
N VS++A ++ C VQ + E
Sbjct: 97 SCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIRE 156
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
A F + + N ++ M++G+++ + DA +F++MP +VV++T +I GY K ++
Sbjct: 157 AEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRED- 215
Query: 178 GGIARARALFDAMPRRNEV---------------SWTVMINGLVENGL-YEEAWELFGRM 221
G RA LF M R +EV ++ G V +GL ++ ++
Sbjct: 216 -GCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDF---- 270
Query: 222 PQKNVVASTAMITGFCKQGKVDEAWTLFQQI---RCRDIASWNIMITGYAQNGRGEEALN 278
N V S+A+ +C VD+A +++ + C ++A + +I G GR +EA
Sbjct: 271 --DNSV-SSALAEFYCVSDAVDDAKRVYESMVGEACSNVA--DSLIGGLVSMGRVKEA-- 323
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
M+ G++ LI +L A+ Q +++ L K L+ N ++T+YS
Sbjct: 324 ---GMIFYGLRDKTLISNNLMI--KGYAMSGQFKKSKKLFEKMSLK-HLTSLNTMITVYS 377
Query: 339 KCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
K G + ++ F +T + + V+WN++++ + + + +A + M V TF
Sbjct: 378 KNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYSRSTFS 437
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY--ACLVDVMSRAGQLQRA 448
L C + L H P + Y LVD S+ G L A
Sbjct: 438 VLFRACAYLCSFQQGQLLH---AHLAKTPYQENVYVGTALVDFYSKCGHLADA 487
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 163/389 (41%), Gaps = 103/389 (26%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL--FKE 155
+V+S N +A + L EA + F MP R +S+N MISG+ ++G+ +A L F
Sbjct: 36 HVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMH 95
Query: 156 MPCP--NVVSYTVMI---------------------DGYVKVKEGG-----------GIA 181
C N VS++ + GY + G GI
Sbjct: 96 SSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIR 155
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
A +F+ + N V W++M+ G V+ + +A E+F +MP ++VVA T +I+G+ K+
Sbjct: 156 EAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKR-- 213
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFT 300
++G E AL+LF M R+ + P++ +
Sbjct: 214 ---------------------------EDG-CERALDLFGCMRRSSEVLPNEFTLDCVLR 245
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY------------------SKCGS 342
CA L +L G+ + L IK GFD D SV++AL Y C +
Sbjct: 246 VCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACSN 305
Query: 343 IVDSELA--------------FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
+ DS + F ++S N +I +A + K++ F++M
Sbjct: 306 VADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKH 365
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNLFN 417
+ + ++++V + G++DE++ LF+
Sbjct: 366 L----TSLNTMITVYSKNGELDEAVKLFD 390
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 114/218 (52%), Gaps = 5/218 (2%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+V+++ I K GK+ EA +F ++ R ++SWN MI+GY+Q G+ EAL L S M
Sbjct: 36 HVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMH 95
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
+ ++ +++ F + +AC L G+Q ++L+ K G+ V +AL+ Y +C I
Sbjct: 96 SSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIR 155
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS-VC 403
++E+ F + + V W+ ++A + Q + A F++M VR D + + +L+S
Sbjct: 156 EAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKM---PVR-DVVAWTTLISGYA 211
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
R + +++LF M + P C++ V +R
Sbjct: 212 KREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCAR 249