Miyakogusa Predicted Gene

Lj0g3v0259609.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259609.1 CUFF.17106.1
         (494 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g089980.1 | tRNA (cytosine(34)-C(5))-methyltransferase-lik...   666   0.0  
Medtr3g086950.1 | tRNA (cytosine(34)-C(5))-methyltransferase-lik...   532   e-151

>Medtr8g089980.1 | tRNA (cytosine(34)-C(5))-methyltransferase-like
           protein | HC | chr8:37616552-37624367 | 20130731
          Length = 818

 Score =  666 bits (1718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/501 (68%), Positives = 388/501 (77%), Gaps = 18/501 (3%)

Query: 1   MVYSTCSMNPIENEAVVAEVLRRCGGSVKLVDVSSELPQLIRRPGLKKWKVYDKSTWFVS 60
           MVYSTCSMNPIENEAVVAEVLRRCG SVKLVDVSSELPQLIRRPGLK+WKVYDKS+WFVS
Sbjct: 329 MVYSTCSMNPIENEAVVAEVLRRCGESVKLVDVSSELPQLIRRPGLKRWKVYDKSSWFVS 388

Query: 61  YKDVPKFRGGAILPGMFPSGR----LDNSNRNVDM-GDIANGANGNAEDCIQAVENPVMP 115
            KDVPKFR   IL  MFPSG+    L +SN NVDM  DI +  N  AED I+A+ENPVM 
Sbjct: 389 SKDVPKFRRSVILSSMFPSGKGYQDLGDSNCNVDMEDDITSVENEKAEDVIEALENPVMA 448

Query: 116 ESVEEVSDLPLEHCMRIVPHDQNTGAFFIAVLQKVSPLPAIQEKPKIDVGGKCAEPANHS 175
           ES EEVSD PLEHCMRI+PHDQNTGAFFIAVLQKVSPLPA+ EKP           +  S
Sbjct: 449 ESAEEVSDFPLEHCMRIMPHDQNTGAFFIAVLQKVSPLPAVLEKP-----------SKQS 497

Query: 176 LQDAQVLQINXXXXXXXXXXXXXXXXNVNDNEPDTEDLEVSPVPNEEDSKETEE-PHNVQ 234
           L+DAQ L IN                 VNDN  +T+DLE SP+  EE + E  E PHN Q
Sbjct: 498 LEDAQALHINSSETTLEEVFKAVPEETVNDNVCNTDDLEDSPLTREERNSEETEEPHNAQ 557

Query: 235 NVEKKIPGIRKLQIQGKWRGVDPVVFFKDEAIISSIRDFYGIDEKFPFSGHLVTRNDDTS 294
           N  +K+PG RKLQ QGKWRGVDPVVFFKDEAI++SI++FYGIDE FPF+GHLVTRN D S
Sbjct: 558 NTAEKVPGKRKLQYQGKWRGVDPVVFFKDEAIVNSIKNFYGIDEGFPFNGHLVTRNLDNS 617

Query: 295 HVKRIYYISKSVKDVLQLNLSVGQQLKITSVGLKMFERQTARQGSDAPCAFRISSEGLPL 354
           + KRIYY+SKSVKD++ LN SVGQQLK+TSVG+KMFERQTAR+G  +PCAFRISSEGLPL
Sbjct: 618 NAKRIYYVSKSVKDIVALNFSVGQQLKMTSVGMKMFERQTAREGGSSPCAFRISSEGLPL 677

Query: 355 ILPYITKQILQASPADFKRILQXXXXXXXXXXXXEFGKNVANLLPGCCVLTLAKGNEVAT 414
           ILPYITKQI+QASP DF+R+LQ            EFG+  ANLLPGCCV+ + KGN VAT
Sbjct: 678 ILPYITKQIIQASPEDFRRLLQDKDVKYSDFADAEFGEKAANLLPGCCVVIMGKGNTVAT 737

Query: 415 ESLKVDESTIAIGCWRGKTRLTVMVTAMDCQELLERLLIRLDTENGSNGHVDKSSIN-AS 473
           ESLKVDESTIAIGCWRG+ RL+VMV+AMDCQELL RLLIRL TENGS+G VD SS +   
Sbjct: 738 ESLKVDESTIAIGCWRGRARLSVMVSAMDCQELLARLLIRLGTENGSSGQVDISSNDVGG 797

Query: 474 EVQPLPELNGGNEDDVKATVS 494
           E Q + ELN  +++D+KA VS
Sbjct: 798 EAQAVQELNDKSDNDLKAAVS 818


>Medtr3g086950.1 | tRNA (cytosine(34)-C(5))-methyltransferase-like
           protein | HC | chr3:39418089-39425597 | 20130731
          Length = 784

 Score =  532 bits (1371), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 281/467 (60%), Positives = 341/467 (73%), Gaps = 13/467 (2%)

Query: 1   MVYSTCSMNPIENEAVVAEVLRRCGGSVKLVDVSSELPQLIRRPGLKKWKVYDKSTWFVS 60
           MVYSTCS+NPIENEAV+AE+LRRC GS++LVDVS ELPQLI RPGLK WKV DK  + VS
Sbjct: 322 MVYSTCSINPIENEAVIAEILRRCEGSIELVDVSGELPQLICRPGLKTWKVCDKGKYLVS 381

Query: 61  YKDVPKFRGGAILPGMFPSG---RLDNSNRNVDMGDIANGANGNAEDCIQAVENPVMPES 117
            K+VPK     +LP MFP+G   +  + N N D+       NG++ED +Q  EN +M E 
Sbjct: 382 CKEVPKVLRNVVLPSMFPNGGSYQDTDCNSNCDV-------NGHSEDGVQEAENHMMHEF 434

Query: 118 VEEVSDLPLEHCMRIVPHDQNTGAFFIAVLQKVSPLPAIQEKPKIDVGGKCAEPANHSLQ 177
            EE+SD PL+ CMR++PHDQN+GAFFIAVLQKVS LPAI+ K +  V  +  E  N   +
Sbjct: 435 TEELSDFPLDRCMRLLPHDQNSGAFFIAVLQKVSHLPAIEVKIRKKVDRQHVESVNQGNE 494

Query: 178 DAQVLQINXXXXXXXXXXXXXXXXNVNDNEPDTEDLEVSPVPNEEDSKETEEPHNVQNVE 237
           DAQVLQIN                + N NEP+T DL+ SPV +E DS+E +EPHN +N+ 
Sbjct: 495 DAQVLQINPSESTRDEEVCEQVSED-NKNEPNTADLKFSPVIDEGDSEEAQEPHNEENMA 553

Query: 238 KKIPGIRKLQIQGKWRGVDPVVFFKDEAIISSIRDFYGIDEKFPFSGHLVTRNDDTSHVK 297
           K  P  RKLQIQGKWRGVDPVVFFKDEAII SI+ FYGI+E FP  GHL+TRN DTS+VK
Sbjct: 554 KITPSKRKLQIQGKWRGVDPVVFFKDEAIIKSIKAFYGINEHFPLDGHLLTRNSDTSNVK 613

Query: 298 RIYYISKSVKDVLQLNLSVGQQLKITSVGLKMFERQTARQGSDAPCAFRISSEGLPLILP 357
           R+YYISK VK+VL+LNLSVGQQLKITSVG+K+FERQ +R+G    CAFRI+SEGLPLILP
Sbjct: 614 RLYYISKPVKNVLELNLSVGQQLKITSVGVKIFERQKSREGRSVECAFRITSEGLPLILP 673

Query: 358 YITKQILQASPADFKRILQXXXXXXXXXXXXEFGKNVANLLPGCCVLTLAKGNEVATESL 417
           +ITKQIL ASP DFK +LQ            +FG+   NL+PGCCV+ L +GN  A E+L
Sbjct: 674 HITKQILSASPIDFKHLLQYKNIKFAEFVDAKFGEKATNLMPGCCVVVLGEGNRTAAEAL 733

Query: 418 KVDESTIAIGCWRGKTRLTVMVTAMDCQELLERLLIRLD--TENGSN 462
            V ES+IAI CW+G   LTVMVT+++CQELLERLL+RLD  TE GS+
Sbjct: 734 HVHESSIAIACWKGGASLTVMVTSIECQELLERLLMRLDRATEKGSS 780