Miyakogusa Predicted Gene
- Lj0g3v0259429.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0259429.1 tr|A8IE47|A8IE47_CHLRE Lipid-binding START
protein OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_188173,39.52,8e-17,SUBFAMILY NOT NAMED,NULL;
PHOSPHATIDYLCHOLINE TRANSFER PROTEIN,NULL; no description,START-like
domai,CUFF.17095.1
(208 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g092640.1 | membrane-related protein CP5, putative | HC | ... 353 6e-98
Medtr1g078030.1 | mammalian STARD2 lipid-binding START domain pr... 269 2e-72
Medtr5g007030.2 | mammalian STARD2 lipid-binding START domain pr... 213 1e-55
Medtr5g007030.1 | mammalian STARD2 lipid-binding START domain pr... 212 2e-55
Medtr4g005140.1 | homeobox/lipid-binding domain protein | HC | c... 77 1e-14
>Medtr3g092640.1 | membrane-related protein CP5, putative | HC |
chr3:42338841-42335197 | 20130731
Length = 424
Score = 353 bits (906), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 167/212 (78%), Positives = 189/212 (89%), Gaps = 4/212 (1%)
Query: 1 MKVQWIRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWC 60
MKVQWIRKFPFFCKDREYIIGRRIWECGRSYYC+TKG+DCPS+P+++KPRRVDVYYSSWC
Sbjct: 213 MKVQWIRKFPFFCKDREYIIGRRIWECGRSYYCITKGVDCPSIPRQEKPRRVDVYYSSWC 272
Query: 61 IRAVESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEXXX 120
IRAVES R NGQLTACE+LLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQE
Sbjct: 273 IRAVESKRDNGQLTACEILLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEAKA 332
Query: 121 XXXXXXXXXFMAQVNTKISPDYLQSIGTTENSS-ETENAVAT-DKPQGVNIPKMLVIGGA 178
FMA VNTKISP+YLQSIG++++ S +TE+A+ + DKP+G+ +PKMLVIGGA
Sbjct: 333 SGAPLSRSAFMAGVNTKISPEYLQSIGSSDDESLQTESAITSDDKPKGMTVPKMLVIGGA 392
Query: 179 VALACSLDRGLVTKYVIFGVARR--FANLGKR 208
VALACSLD+GLVTK VIFGVA+R FAN+GKR
Sbjct: 393 VALACSLDKGLVTKAVIFGVAKRFGFANMGKR 424
>Medtr1g078030.1 | mammalian STARD2 lipid-binding START domain
protein | HC | chr1:34888325-34884479 | 20130731
Length = 395
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 165/210 (78%), Gaps = 3/210 (1%)
Query: 1 MKVQWIRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWC 60
M VQW+RKFPFFC DREYIIGRRIW+ R+YYCVTKG+ C S+P++ KPRRVD+YYSS+
Sbjct: 186 MMVQWVRKFPFFCSDREYIIGRRIWDAERTYYCVTKGVPCSSIPRQSKPRRVDLYYSSFF 245
Query: 61 IRAVESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEXXX 120
IRAV+S R +GQLT+CEVL FH+E+MGIPWEIAKLGVR+GMWG V+K +PGLR Y++
Sbjct: 246 IRAVKS-RKDGQLTSCEVLFFHYEDMGIPWEIAKLGVRQGMWGAVKKFDPGLRTYKKERD 304
Query: 121 XXXXXXXXXFMAQVNTKISPDYLQSI-GTTENSSETENAVA-TDKPQGVNIPKMLVIGGA 178
A++NTK++ DY++ + +T N ETEN + DKP G +IPK+LV+GGA
Sbjct: 305 SGVPLSPCANNAKINTKVTADYVRCLEDSTSNLLETENQDSFDDKPIGRSIPKLLVVGGA 364
Query: 179 VALACSLDRGLVTKYVIFGVARRFANLGKR 208
+ALAC+LD+GLVTK V+FG+ARRF G+R
Sbjct: 365 IALACTLDQGLVTKAVVFGIARRFGKFGRR 394
>Medtr5g007030.2 | mammalian STARD2 lipid-binding START domain
protein | HC | chr5:1173861-1179345 | 20130731
Length = 326
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 132/203 (65%), Gaps = 2/203 (0%)
Query: 3 VQWIRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWCIR 62
V WI+KFPFFC DREYII RRIW+ G +YYCVTKG+ PS+PKRDKPRRVD+Y+SSW I+
Sbjct: 122 VHWIKKFPFFCSDREYIIARRIWQAGNAYYCVTKGVPYPSLPKRDKPRRVDLYFSSWVIK 181
Query: 63 AVESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEXXXXX 122
VES +G+GQL+ACEV L HHE+MGIP ++AKLGVR GMWG V+K+ G+RAYQ
Sbjct: 182 PVESRKGDGQLSACEVTLLHHEDMGIPKDVAKLGVRHGMWGAVKKLHSGMRAYQNARKTD 241
Query: 123 XXXXXXXFMAQVNTKISPD-YLQSIGTTENSSETENAVATDKPQGVNIP-KMLVIGGAVA 180
MA T++S + L S+ E E A+ + G + K + +GG VA
Sbjct: 242 ASLSRCALMASKTTRLSSNGNLHSLEDASLMEEREQAINNARQIGHGLDWKWVALGGTVA 301
Query: 181 LACSLDRGLVTKYVIFGVARRFA 203
+ + G V + ++ G RFA
Sbjct: 302 VVLGIHSGAVGRALLLGAGHRFA 324
>Medtr5g007030.1 | mammalian STARD2 lipid-binding START domain
protein | HC | chr5:1173758-1179345 | 20130731
Length = 436
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 132/203 (65%), Gaps = 2/203 (0%)
Query: 3 VQWIRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWCIR 62
V WI+KFPFFC DREYII RRIW+ G +YYCVTKG+ PS+PKRDKPRRVD+Y+SSW I+
Sbjct: 232 VHWIKKFPFFCSDREYIIARRIWQAGNAYYCVTKGVPYPSLPKRDKPRRVDLYFSSWVIK 291
Query: 63 AVESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEXXXXX 122
VES +G+GQL+ACEV L HHE+MGIP ++AKLGVR GMWG V+K+ G+RAYQ
Sbjct: 292 PVESRKGDGQLSACEVTLLHHEDMGIPKDVAKLGVRHGMWGAVKKLHSGMRAYQNARKTD 351
Query: 123 XXXXXXXFMAQVNTKISPD-YLQSIGTTENSSETENAVATDKPQGVNIP-KMLVIGGAVA 180
MA T++S + L S+ E E A+ + G + K + +GG VA
Sbjct: 352 ASLSRCALMASKTTRLSSNGNLHSLEDASLMEEREQAINNARQIGHGLDWKWVALGGTVA 411
Query: 181 LACSLDRGLVTKYVIFGVARRFA 203
+ + G V + ++ G RFA
Sbjct: 412 VVLGIHSGAVGRALLLGAGHRFA 434
>Medtr4g005140.1 | homeobox/lipid-binding domain protein | HC |
chr4:85012-80984 | 20130731
Length = 381
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 8/111 (7%)
Query: 6 IRKFPFFCKDREYIIGRRIWEC-GRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWCIRAV 64
++KFP K REY++ ++WE +++YC K + P+++K RV+ + S W IR V
Sbjct: 172 VKKFPLL-KPREYVLTWKLWEGRDKTFYCYIKECEHTLAPRQNKYVRVEFFRSGWRIRQV 230
Query: 65 ESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAY 115
ACE+ +FH E+ G+ E+AKL KG+W V K++ LR Y
Sbjct: 231 PGR------NACEITMFHQEDAGLNVEMAKLAFSKGIWSYVCKMDNALRRY 275