Miyakogusa Predicted Gene

Lj0g3v0259369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259369.1 Non Characterized Hit- tr|K4B077|K4B077_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,27.27,0.000000000000006,seg,NULL; coiled-coil,NULL,CUFF.17084.1
         (321 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g075070.1 | hypothetical protein | HC | chr3:34100987-3409...   434   e-122
Medtr8g044120.1 | hypothetical protein | HC | chr8:16904070-1689...    70   4e-12

>Medtr3g075070.1 | hypothetical protein | HC |
           chr3:34100987-34096504 | 20130731
          Length = 557

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 228/334 (68%), Positives = 262/334 (78%), Gaps = 20/334 (5%)

Query: 2   EKLRAGYAQKKMPLPDMDNGLHKAMRKELRHMESEQAVVKSRPSSSSTGDCMLSDNADVI 61
           EKLRA +AQKK+ L DM NGLHKAMRKELRHME++ A V SR S  S+G+ + SDN+D I
Sbjct: 230 EKLRAVHAQKKVGLVDMANGLHKAMRKELRHMETD-AAVNSRASPLSSGNRLPSDNSDSI 288

Query: 62  KGFKAISSIRRSYETELEQSEKRKQDLLAEIVFEEQRGRELSKIVNELVPASKINS---- 117
           +     SS+RRSYE+ELEQSEKRKQDLLAEIVFEEQRGRELSKIVNEL PA K NS    
Sbjct: 289 Q---VASSVRRSYESELEQSEKRKQDLLAEIVFEEQRGRELSKIVNELSPAKKSNSSPAK 345

Query: 118 ----IQKPARARKRSTDRSRMSMRLTEEAEKYIEDFISNVEDTDISSLDGERSETSSSIG 173
               + +P RARK+S DR RMSMRLTEEAE+YIEDFISNVEDTDISSLDGERS+TSSSIG
Sbjct: 346 KSNSLPEPPRARKKSNDRGRMSMRLTEEAERYIEDFISNVEDTDISSLDGERSDTSSSIG 405

Query: 174 GLIKPETSNSPPIPRSIPALMDGITLPWLQWETCNDASPMTSMNNTLITS---KTASSTQ 230
           GLIKPET +SPP+PRS+P LMDGITLPWLQWET ND +PM ++N  L+TS     ASSTQ
Sbjct: 406 GLIKPETFSSPPLPRSLPVLMDGITLPWLQWETNNDTTPMATLNKALLTSTPNTAASSTQ 465

Query: 231 ETTKLQDQRXXXXXXXXXXXPDCLQEYIGKDVFN---KVYGYKDQSFSAKSKELRYDIDD 287
           E   L+DQ            PD L+EY+GKDVF+   KVY   D+SFSAKSK LR+DID+
Sbjct: 466 EN--LKDQSNHSISGRGSWSPDYLKEYVGKDVFSKLGKVYSNPDESFSAKSKGLRFDIDE 523

Query: 288 YLKVKTNEDFLVERWKQRQRINSGSLLLCHPRLF 321
           YLKVK+NEDFL ERWKQ+QRINSG LLLC+  +F
Sbjct: 524 YLKVKSNEDFLTERWKQQQRINSGCLLLCNISMF 557


>Medtr8g044120.1 | hypothetical protein | HC |
           chr8:16904070-16897201 | 20130731
          Length = 529

 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 78/137 (56%), Gaps = 7/137 (5%)

Query: 22  LHKAMRKELRHMESE-QAVVKSRPSSSSTGDCMLSDNADVIKGF------KAISSIRRSY 74
           +++ +R E+R   SE Q  ++S    S+  D  ++D AD+          +    IRR Y
Sbjct: 239 IYETVRSEVRRAISEIQIDLESAIQKSNATDISVTDMADIHPDLLNPGTVELAFEIRREY 298

Query: 75  ETELEQSEKRKQDLLAEIVFEEQRGRELSKIVNELVPASKINSIQKPARARKRSTDRSRM 134
             +LE++E+R + L A++  EE R REL +I+ E++P  K  +I K   +RK S +R RM
Sbjct: 299 TKKLEEAEERARRLRADLAVEEHRVRELDRILREVLPYPKTPNIPKSRPSRKSSIERKRM 358

Query: 135 SMRLTEEAEKYIEDFIS 151
           S RL E+A+ Y ++ +S
Sbjct: 359 SKRLAEDAKAYFDECVS 375