Miyakogusa Predicted Gene
- Lj0g3v0259349.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0259349.1 Non Characterized Hit- tr|B4FQR1|B4FQR1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,45.28,4e-19,zf-RING_2,Zinc finger, RING-type; RING/U-box,NULL;
seg,NULL; no description,Zinc finger, RING/FYVE/P,CUFF.17081.1
(199 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g088100.1 | zinc finger, C3HC4 type (RING finger) protein ... 184 5e-47
Medtr1g114240.2 | RING-finger ubiquitin ligase | HC | chr1:51552... 73 2e-13
Medtr1g114240.1 | RING-finger ubiquitin ligase | HC | chr1:51552... 73 2e-13
Medtr8g037150.1 | E3 ubiquitin ligase BIG brother-like protein |... 64 1e-10
Medtr4g065670.2 | E3 ubiquitin ligase BIG brother-like protein |... 63 2e-10
Medtr4g065670.1 | E3 ubiquitin ligase BIG brother-like protein |... 63 2e-10
Medtr5g016980.1 | zinc finger, C3HC4 type (RING finger) protein ... 59 3e-09
Medtr2g078440.1 | zinc finger, C3HC4 type (RING finger) protein ... 59 3e-09
Medtr4g085630.1 | RING zinc finger protein, putative | HC | chr4... 58 5e-09
Medtr3g025940.1 | zinc finger, C3HC4 type (RING finger) protein ... 58 5e-09
Medtr2g078450.1 | zinc finger, C3HC4 type (RING finger) protein ... 57 9e-09
Medtr2g078450.2 | zinc finger, C3HC4 type (RING finger) protein ... 57 9e-09
Medtr5g016960.1 | zinc finger, C3HC4 type (RING finger) protein ... 57 1e-08
Medtr7g100950.2 | zinc finger, C3HC4 type (RING finger) protein ... 57 1e-08
Medtr7g100950.1 | zinc finger, C3HC4 type (RING finger) protein ... 57 1e-08
Medtr2g076290.1 | zinc finger, C3HC4 type (RING finger) protein ... 57 1e-08
Medtr5g016920.1 | zinc finger, C3HC4 type (RING finger) protein ... 57 2e-08
Medtr1g066430.1 | zinc finger, C3HC4 type (RING finger) protein ... 56 2e-08
Medtr6g082620.1 | zinc finger, C3HC4 type (RING finger) protein ... 56 3e-08
Medtr1g066400.2 | RING zinc finger protein, putative | LC | chr1... 55 5e-08
Medtr1g066400.1 | RING zinc finger protein, putative | LC | chr1... 55 5e-08
Medtr3g108808.3 | zinc finger (C3HC4-type RING finger) family pr... 55 6e-08
Medtr3g108808.1 | zinc finger (C3HC4-type RING finger) family pr... 55 6e-08
Medtr8g036640.1 | E3 ubiquitin ligase BIG brother, putative | HC... 54 7e-08
Medtr4g120270.1 | RING-H2 zinc finger protein | HC | chr4:498615... 54 7e-08
Medtr5g079050.1 | zinc finger, C3HC4 type (RING finger) protein ... 54 7e-08
Medtr8g072020.1 | zinc finger, C3HC4 type (RING finger) protein ... 54 1e-07
Medtr8g072020.2 | zinc finger, C3HC4 type (RING finger) protein ... 54 1e-07
Medtr8g023400.1 | zinc finger, C3HC4 type (RING finger) protein ... 53 2e-07
Medtr1g019200.3 | zinc finger (C3HC4-type RING finger) family pr... 53 2e-07
Medtr1g019200.2 | zinc finger (C3HC4-type RING finger) family pr... 53 2e-07
Medtr1g019200.1 | zinc finger (C3HC4-type RING finger) family pr... 53 2e-07
Medtr1g114320.2 | E3 ubiquitin-protein ligase RING1-like protein... 52 3e-07
Medtr1g114320.3 | E3 ubiquitin-protein ligase RING1-like protein... 52 3e-07
Medtr1g114320.1 | E3 ubiquitin-protein ligase RING1-like protein... 52 3e-07
Medtr1g114320.4 | E3 ubiquitin-protein ligase RING1-like protein... 52 3e-07
Medtr4g116460.1 | zinc finger, C3HC4 type (RING finger) protein ... 52 3e-07
Medtr4g116460.2 | zinc finger, C3HC4 type (RING finger) protein ... 52 3e-07
Medtr5g078900.1 | zinc finger, C3HC4 type (RING finger) protein ... 52 3e-07
Medtr3g110190.1 | RING-H2 finger protein ATL4J | HC | chr3:51190... 52 4e-07
Medtr5g026260.1 | zinc finger, C3HC4 type (RING finger) protein ... 51 7e-07
Medtr3g088080.1 | zinc finger, C3HC4 type (RING finger) protein ... 51 9e-07
Medtr4g110100.1 | zinc finger, C3HC4 type (RING finger) protein ... 51 9e-07
Medtr3g072630.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 1e-06
Medtr1g070140.1 | RING-H2 zinc finger protein | HC | chr1:308110... 50 1e-06
Medtr3g072630.2 | zinc finger, C3HC4 type (RING finger) protein ... 50 1e-06
Medtr6g087150.1 | RING-H2 finger protein ATL4J | HC | chr6:33511... 50 1e-06
Medtr8g019710.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 1e-06
Medtr5g016940.1 | zinc finger, C3HC4 type (RING finger) protein ... 50 2e-06
Medtr8g106240.1 | C3HC4-type RING zinc finger protein | HC | chr... 50 2e-06
Medtr1g009680.1 | zinc finger, C3HC4 type (RING finger) protein,... 49 2e-06
Medtr7g079290.1 | anaphase-promoting complex subunit 11 RING-H2 ... 49 3e-06
Medtr5g041310.1 | zinc finger, C3HC4 type (RING finger) protein ... 49 3e-06
Medtr5g009190.1 | RING-H2 finger ATL21A-like protein | LC | chr5... 49 3e-06
Medtr2g436100.1 | RING-H2 zinc finger protein | HC | chr2:139995... 49 4e-06
Medtr1g011380.1 | zinc finger, C3HC4 type (RING finger) protein ... 49 4e-06
Medtr4g017500.1 | zinc finger, C3HC4 type (RING finger) protein ... 49 4e-06
Medtr5g009200.1 | RING-H2 finger ATL21A-like protein | LC | chr5... 48 5e-06
Medtr5g009210.1 | RING-H2 finger ATL21A-like protein | LC | chr5... 48 5e-06
Medtr1g043410.1 | RING-H2 zinc finger protein | HC | chr1:162945... 48 6e-06
Medtr7g096690.1 | RING-H2 zinc finger protein | HC | chr7:388073... 48 6e-06
Medtr5g041330.1 | anaphase-promoting complex subunit 11 RING-H2 ... 48 6e-06
Medtr8g066780.1 | anaphase-promoting complex subunit 11 RING-H2 ... 48 6e-06
Medtr8g099515.1 | RING-H2 finger protein ATL21A, putative | HC |... 48 6e-06
Medtr2g097620.1 | zinc finger, C3HC4 type (RING finger) protein,... 48 6e-06
Medtr8g091560.1 | zinc finger, C3HC4 type (RING finger) protein ... 47 8e-06
>Medtr3g088100.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr3:39940913-39941752 | 20130731
Length = 211
Score = 184 bits (467), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 124/212 (58%), Gaps = 16/212 (7%)
Query: 1 MEPEEGKQSSHKNPYVELEQVNFDYILAIGLQERERE---FTMLATIQXXXXXXXXXXXX 57
ME EEGKQSS KNPY ELE+V+ D++LAIGLQE+E E FT LATI+
Sbjct: 1 MEREEGKQSSEKNPYTELEEVSSDFVLAIGLQEQELERTTFTNLATIESESDEDISDSSF 60
Query: 58 XXXXXXXX----RQEFETDPQFLECXXXXXXXXXXXXXXXXXX-------XXLSYXXXXX 106
QEFETD QF+E LSY
Sbjct: 61 SNDDIGDADFSFSQEFETDLQFVEDEGSNIDDDDDYEDDEMELEEDEVDPDELSYEELIE 120
Query: 107 XXXXXXXXKRGLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEH 166
KRGL NEISSCLHPYT + AES SGI+RCVICQ+EYEEG E+LVAL C+H
Sbjct: 121 LGNFIGEEKRGLPANEISSCLHPYTSKIAESTSGIDRCVICQIEYEEG-ESLVAL-HCDH 178
Query: 167 PYHGDCISKWLQIKKVCPICSNEVSTSNMPSN 198
PYH DCISKWLQIKKVCPICSNEVST+N N
Sbjct: 179 PYHTDCISKWLQIKKVCPICSNEVSTTNKAKN 210
>Medtr1g114240.2 | RING-finger ubiquitin ligase | HC |
chr1:51552982-51559455 | 20130731
Length = 339
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 99 LSYXXXXXXXXXXXXXKRGLSENEISSCLHPYTFQSAESKSGI-ERCVICQVEYEEGEEA 157
LSY RGLS + I+ CL +++ + G + CVIC+V+YE+ +E+
Sbjct: 243 LSYEELLALGEVVGTESRGLSTDTIA-CLPSVNYKAGSDQLGSNDSCVICRVDYED-DES 300
Query: 158 LVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTS 193
L L C+H YH +CI+ WL+I KVCP+CS EVS S
Sbjct: 301 LTVL-SCKHLYHPECINNWLKINKVCPVCSTEVSAS 335
>Medtr1g114240.1 | RING-finger ubiquitin ligase | HC |
chr1:51552982-51559455 | 20130731
Length = 333
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 99 LSYXXXXXXXXXXXXXKRGLSENEISSCLHPYTFQSAESKSGI-ERCVICQVEYEEGEEA 157
LSY RGLS + I+ CL +++ + G + CVIC+V+YE+ +E+
Sbjct: 237 LSYEELLALGEVVGTESRGLSTDTIA-CLPSVNYKAGSDQLGSNDSCVICRVDYED-DES 294
Query: 158 LVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTS 193
L L C+H YH +CI+ WL+I KVCP+CS EVS S
Sbjct: 295 LTVL-SCKHLYHPECINNWLKINKVCPVCSTEVSAS 329
>Medtr8g037150.1 | E3 ubiquitin ligase BIG brother-like protein | HC
| chr8:13713285-13707137 | 20130731
Length = 247
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 116 RGLSENEISSC-LHPYTFQSA-ESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCI 173
RGL + I + Y F S + K+ +RCV+CQ+ Y G++ + C H YHG+CI
Sbjct: 166 RGLPQELIDTLPTSKYKFGSLFKRKNSGKRCVVCQMTYRRGDQQMKL--PCSHVYHGECI 223
Query: 174 SKWLQIKKVCPICSNEV 190
+KWL I K CP+C+ EV
Sbjct: 224 TKWLSINKKCPVCNTEV 240
>Medtr4g065670.2 | E3 ubiquitin ligase BIG brother-like protein | HC
| chr4:24500918-24495700 | 20130731
Length = 255
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 8/79 (10%)
Query: 116 RGLSENEISSCLHPYT-FQSA---ESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGD 171
RGL++ +IS L P + F+ KS ERCVICQ+EY+ G++ + C+H YH
Sbjct: 173 RGLTQEQIS--LLPVSKFKCGFFFRKKSRNERCVICQMEYKRGDKRITL--PCKHLYHAS 228
Query: 172 CISKWLQIKKVCPICSNEV 190
C +KWL I K CPIC EV
Sbjct: 229 CGNKWLTINKACPICYTEV 247
>Medtr4g065670.1 | E3 ubiquitin ligase BIG brother-like protein | HC
| chr4:24500958-24495700 | 20130731
Length = 248
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 8/79 (10%)
Query: 116 RGLSENEISSCLHPYT-FQSA---ESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGD 171
RGL++ +IS L P + F+ KS ERCVICQ+EY+ G++ + C+H YH
Sbjct: 166 RGLTQEQIS--LLPVSKFKCGFFFRKKSRNERCVICQMEYKRGDKRITL--PCKHLYHAS 221
Query: 172 CISKWLQIKKVCPICSNEV 190
C +KWL I K CPIC EV
Sbjct: 222 CGNKWLTINKACPICYTEV 240
>Medtr5g016980.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:6151648-6153876 | 20130731
Length = 340
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 6/76 (7%)
Query: 115 KRGLSENEISSCLHPYTFQS--AESKSGIERCVICQVEYEEGEEALVALDQC--EHPYHG 170
K GL E EIS + T+Q E+ + + C ICQ +Y +GE + LD C H YH
Sbjct: 255 KAGLREEEISESIQKETYQPNIKETSTMNQTCTICQEDYIDGER-IGRLD-CIHRHIYHL 312
Query: 171 DCISKWLQIKKVCPIC 186
DCIS+WL++K VCP+C
Sbjct: 313 DCISQWLEVKNVCPVC 328
>Medtr2g078440.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr2:32685859-32684289 | 20130731
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 118 LSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWL 177
L E I S L + +S+ I+ C+ICQ E++ E+ + + QC+H YH DCI KWL
Sbjct: 228 LPEKTIESQLKTKLYSPYDSQE-IDACMICQEEFKIQEK--IGILQCKHGYHVDCIIKWL 284
Query: 178 QIKKVCPICSNEVST 192
IK +CPIC E T
Sbjct: 285 MIKNICPICKLEALT 299
>Medtr4g085630.1 | RING zinc finger protein, putative | HC |
chr4:33474621-33477283 | 20130731
Length = 557
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 117 GLSENEISSCLHPYTFQS--AESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCIS 174
GLSE+ I+ + + S ES S +E C ICQ EY +G+ + L C H +H +CI+
Sbjct: 481 GLSEDIINKLMKQRFYMSLMTESSSDLEPCCICQEEYVDGQN--LGLLDCGHEFHSNCIT 538
Query: 175 KWLQIKKVCPIC 186
+WL K +CPIC
Sbjct: 539 QWLMQKNLCPIC 550
>Medtr3g025940.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr3:7918725-7915603 | 20130731
Length = 454
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 115 KRGLSENEISSCLH--PYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDC 172
+RGL+E EI +H Y F E+ + + C ICQ ++ +GE + C H YH C
Sbjct: 369 ERGLTEEEILRSIHEETYQFNPDETSTQNQTCTICQEDFVDGES--IGRLNCIHVYHLHC 426
Query: 173 ISKWLQIKKVCPIC 186
I +WL+++ CPIC
Sbjct: 427 IKQWLEMRNACPIC 440
>Medtr2g078450.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:32697439-32693328 | 20130731
Length = 523
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 142 ERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
+ C+ICQ E++ E+ + + +CEH YH +C++KWL +K VCPIC +E
Sbjct: 469 DSCIICQEEFKNKEK--IGILRCEHEYHAECLTKWLLVKNVCPICKSEA 515
>Medtr2g078450.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:32697401-32693397 | 20130731
Length = 523
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 142 ERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
+ C+ICQ E++ E+ + + +CEH YH +C++KWL +K VCPIC +E
Sbjct: 469 DSCIICQEEFKNKEK--IGILRCEHEYHAECLTKWLLVKNVCPICKSEA 515
>Medtr5g016960.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:6138041-6140664 | 20130731
Length = 605
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 117 GLSENEISSCLHPYTFQS--AESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCIS 174
GL+E EI + T++ E+ + + C ICQ +Y +GE + C H +H DCI
Sbjct: 522 GLTEQEIFRYIQQETYRINLEETSTQNQTCTICQEDYVKGER--IGRLDCMHIFHLDCIK 579
Query: 175 KWLQIKKVCPICS 187
+WL++K VCPIC+
Sbjct: 580 QWLELKNVCPICN 592
>Medtr7g100950.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:40711119-40708394 | 20130731
Length = 554
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKW 176
GLSE+ +S C+ + S++ CVIC EY+ ++ + L C H YH CI KW
Sbjct: 474 GLSEDVLSKCVTETIYCSSDQCQDEGSCVICLEEYKNMDD-VGTLKTCGHDYHVSCIKKW 532
Query: 177 LQIKKVCPIC 186
L +KK+CPIC
Sbjct: 533 LSMKKLCPIC 542
>Medtr7g100950.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:40710823-40708276 | 20130731
Length = 556
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKW 176
GLSE+ +S C+ + S++ CVIC EY+ ++ + L C H YH CI KW
Sbjct: 476 GLSEDVLSKCVTETIYCSSDQCQDEGSCVICLEEYKNMDD-VGTLKTCGHDYHVSCIKKW 534
Query: 177 LQIKKVCPIC 186
L +KK+CPIC
Sbjct: 535 LSMKKLCPIC 544
>Medtr2g076290.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr2:31952399-31950543 | 20130731
Length = 336
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 141 IERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVST 192
I+ C ICQ E+E+ E+ + + QC+H YH +CI WL IK CPIC +E T
Sbjct: 281 IDSCTICQTEFEDHEK--IGILQCKHEYHVECIQNWLVIKNECPICKSEALT 330
>Medtr5g016920.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:6120260-6121141 | 20130731
Length = 153
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 117 GLSENEISSCLHPYTFQSA--ESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCIS 174
GL+E EI + T+QS E+ + + C ICQ +Y EGE+ + LD C +H DCI
Sbjct: 71 GLTEQEILRHIQQKTYQSCPNETSTHNQTCTICQEDYVEGEK-IGRLD-CMDIFHLDCIK 128
Query: 175 KWLQIKKVCPIC 186
+WL+++ VCPIC
Sbjct: 129 QWLELRNVCPIC 140
>Medtr1g066430.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:28541851-28546445 | 20130731
Length = 700
Score = 56.2 bits (134), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 117 GLSENEISSCLHPYTFQSAE-SKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
GLSE+ IS L + SAE S+ G C IC EY+ +++ L+ C H YH CI K
Sbjct: 625 GLSESLISKYLTKTLYCSAEQSQEGT--CAICLEEYKN-MDSIGTLETCGHDYHVSCIRK 681
Query: 176 WLQIKKVCPIC 186
WL +K +CPIC
Sbjct: 682 WLSMKNLCPIC 692
>Medtr6g082620.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr6:30792246-30787121 | 20130731
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 115 KRGLSENEISSCLHPYTF--QSAESKSGIER-CVICQVEYEEGEEALVALDQCEHPYHGD 171
K GL E+E+ + + + SK I++ C ICQ EYE +E + CEH YH
Sbjct: 280 KTGLKEDEMKNNIRKIKLLISNDSSKHQIDKKCTICQEEYESDDE--LGRLHCEHSYHFQ 337
Query: 172 CISKWLQIKKVCPICSNEV 190
CI +WL +K CP+C EV
Sbjct: 338 CIKQWLVLKNFCPVCKQEV 356
>Medtr1g066400.2 | RING zinc finger protein, putative | LC |
chr1:28529658-28532902 | 20130731
Length = 532
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 117 GLSENEISSCLHPYTFQSAE-SKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
GLSE IS L + SAE S+ G C IC VEY+ ++ + + C H YH CI K
Sbjct: 457 GLSEGLISKYLTKTLYCSAEQSQEGT--CAICLVEYKNMDD-VGTMKTCGHNYHVSCIRK 513
Query: 176 WLQIKKVCPIC 186
WL +K +CPIC
Sbjct: 514 WLSMKNMCPIC 524
>Medtr1g066400.1 | RING zinc finger protein, putative | LC |
chr1:28529658-28532787 | 20130731
Length = 532
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 117 GLSENEISSCLHPYTFQSAE-SKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
GLSE IS L + SAE S+ G C IC VEY+ ++ + + C H YH CI K
Sbjct: 457 GLSEGLISKYLTKTLYCSAEQSQEGT--CAICLVEYKNMDD-VGTMKTCGHNYHVSCIRK 513
Query: 176 WLQIKKVCPIC 186
WL +K +CPIC
Sbjct: 514 WLSMKNMCPIC 524
>Medtr3g108808.3 | zinc finger (C3HC4-type RING finger) family
protein | HC | chr3:50292649-50288412 | 20130731
Length = 541
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Query: 118 LSENEISSCLHPYTFQSAESKSGIE---------RCVICQVEYEEGEEALVALDQCEHPY 168
++E ++S CL +QS+ S + + +C ICQ EY E +E L CEH Y
Sbjct: 453 VTEEDLSECLKRSFYQSSPSDNATKCCNENKDDIKCCICQEEYVEEDEVGSLL--CEHKY 510
Query: 169 HGDCISKWLQIKKVCPICSNEVS 191
H CI +WL++K CPIC V+
Sbjct: 511 HVVCIQQWLRLKNWCPICKASVT 533
>Medtr3g108808.1 | zinc finger (C3HC4-type RING finger) family
protein | HC | chr3:50292946-50288412 | 20130731
Length = 541
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 11/83 (13%)
Query: 118 LSENEISSCLHPYTFQSAESKSGIE---------RCVICQVEYEEGEEALVALDQCEHPY 168
++E ++S CL +QS+ S + + +C ICQ EY E +E L CEH Y
Sbjct: 453 VTEEDLSECLKRSFYQSSPSDNATKCCNENKDDIKCCICQEEYVEEDEVGSLL--CEHKY 510
Query: 169 HGDCISKWLQIKKVCPICSNEVS 191
H CI +WL++K CPIC V+
Sbjct: 511 HVVCIQQWLRLKNWCPICKASVT 533
>Medtr8g036640.1 | E3 ubiquitin ligase BIG brother, putative | HC |
chr8:13654196-13648887 | 20130731
Length = 286
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 116 RGLSENEISSC-LHPYTFQSA-ESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCI 173
RGL + I + Y F S + K+ +RCV+CQ+ Y G++ + C H YHG+CI
Sbjct: 164 RGLPQELIDTLPTSKYKFGSLFKRKNSGKRCVVCQMTYRRGDQQMKL--PCSHVYHGECI 221
Query: 174 SKWLQIKKV 182
+KWL IKKV
Sbjct: 222 TKWLIIKKV 230
>Medtr4g120270.1 | RING-H2 zinc finger protein | HC |
chr4:49861539-49862357 | 20130731
Length = 272
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 116 RGLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
RGL + ISS L + F S+ + +E C +C E+E+GE V L +C H +H DCI
Sbjct: 79 RGLDASVISS-LPVFNF-SSNTDQAVE-CAVCLSEFEDGETGRV-LPKCNHSFHIDCIDM 134
Query: 176 WLQIKKVCPICSNEV 190
W Q CP+C V
Sbjct: 135 WFQSHSTCPLCRAPV 149
>Medtr5g079050.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:33803352-33800426 | 20130731
Length = 372
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 117 GLSENEISSCLHPYTFQ--SAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCIS 174
GL E EI + T+Q + E+ + + C ICQ ++ +GE + LD C H YH +CI
Sbjct: 284 GLEEEEILMYIQQETYQPNTEETSTMNQTCTICQEDFIDGE-CIGRLD-CNHIYHLNCIK 341
Query: 175 KWLQIKKVCPICSN 188
+WL+ K VCPIC N
Sbjct: 342 QWLEEKNVCPICKN 355
>Medtr8g072020.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr8:30399969-30403913 | 20130731
Length = 503
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQ-IKKVCPICSNEVSTSNMP 196
C IC VEY +G+ V C H +H CI KWL+ I +VCP+C + SN P
Sbjct: 445 CYICLVEYNDGDSVRVL--PCNHEFHRTCIDKWLKEIHRVCPLCRGNICISNSP 496
>Medtr8g072020.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr8:30399969-30403904 | 20130731
Length = 464
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQ-IKKVCPICSNEVSTSNMP 196
C IC VEY +G+ V C H +H CI KWL+ I +VCP+C + SN P
Sbjct: 406 CYICLVEYNDGDSVRVL--PCNHEFHRTCIDKWLKEIHRVCPLCRGNICISNSP 457
>Medtr8g023400.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr8:8435238-8433493 | 20130731
Length = 321
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 120 ENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQI 179
E +I L F++ + K G+E C +C + EGE+ + L +C H +H DCI W Q
Sbjct: 94 EAKILKSLPVLVFKNEDFKDGLE-CAVCLCDVVEGEKTRL-LPKCNHGFHLDCIDMWFQS 151
Query: 180 KKVCPICSNEVST 192
CP+C N VS
Sbjct: 152 HSTCPLCRNLVSV 164
>Medtr1g019200.3 | zinc finger (C3HC4-type RING finger) family
protein | HC | chr1:5742351-5747156 | 20130731
Length = 708
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 130 YTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPIC 186
Y+ S+S E C +CQ E++ E+ + +LD C H YH DCI +WL K +CPIC
Sbjct: 647 YSVDGLGSQSETEPCCVCQEEFKN-EDDIGSLD-CGHDYHIDCIKQWLTHKNICPIC 701
>Medtr1g019200.2 | zinc finger (C3HC4-type RING finger) family
protein | HC | chr1:5740491-5747161 | 20130731
Length = 708
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 130 YTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPIC 186
Y+ S+S E C +CQ E++ E+ + +LD C H YH DCI +WL K +CPIC
Sbjct: 647 YSVDGLGSQSETEPCCVCQEEFKN-EDDIGSLD-CGHDYHIDCIKQWLTHKNICPIC 701
>Medtr1g019200.1 | zinc finger (C3HC4-type RING finger) family
protein | HC | chr1:5740577-5747144 | 20130731
Length = 708
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 130 YTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPIC 186
Y+ S+S E C +CQ E++ E+ + +LD C H YH DCI +WL K +CPIC
Sbjct: 647 YSVDGLGSQSETEPCCVCQEEFKN-EDDIGSLD-CGHDYHIDCIKQWLTHKNICPIC 701
>Medtr1g114320.2 | E3 ubiquitin-protein ligase RING1-like protein |
HC | chr1:51590758-51593219 | 20130731
Length = 315
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 131 TFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
T A S + +C +CQ E+E+G + V C+H YH DC+ WL++ CP+C +E+
Sbjct: 181 TVDDALLSSELNQCAVCQDEFEKGMQ--VKQMPCKHVYHDDCLLPWLELHNSCPVCRHEL 238
Query: 191 STSN 194
T +
Sbjct: 239 PTDD 242
>Medtr1g114320.3 | E3 ubiquitin-protein ligase RING1-like protein |
HC | chr1:51590758-51593164 | 20130731
Length = 315
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 131 TFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
T A S + +C +CQ E+E+G + V C+H YH DC+ WL++ CP+C +E+
Sbjct: 181 TVDDALLSSELNQCAVCQDEFEKGMQ--VKQMPCKHVYHDDCLLPWLELHNSCPVCRHEL 238
Query: 191 STSN 194
T +
Sbjct: 239 PTDD 242
>Medtr1g114320.1 | E3 ubiquitin-protein ligase RING1-like protein |
HC | chr1:51590758-51593266 | 20130731
Length = 315
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 131 TFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
T A S + +C +CQ E+E+G + V C+H YH DC+ WL++ CP+C +E+
Sbjct: 181 TVDDALLSSELNQCAVCQDEFEKGMQ--VKQMPCKHVYHDDCLLPWLELHNSCPVCRHEL 238
Query: 191 STSN 194
T +
Sbjct: 239 PTDD 242
>Medtr1g114320.4 | E3 ubiquitin-protein ligase RING1-like protein |
HC | chr1:51590758-51593164 | 20130731
Length = 315
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 131 TFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
T A S + +C +CQ E+E+G + V C+H YH DC+ WL++ CP+C +E+
Sbjct: 181 TVDDALLSSELNQCAVCQDEFEKGMQ--VKQMPCKHVYHDDCLLPWLELHNSCPVCRHEL 238
Query: 191 STSN 194
T +
Sbjct: 239 PTDD 242
>Medtr4g116460.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:48243366-48247551 | 20130731
Length = 545
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 134 SAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQ-IKKVCPICSNEV 190
+A+ + E+C IC EYE+G++ V C+H YH C+ KWL+ I VCP+C + V
Sbjct: 474 AADGGNDAEQCYICLAEYEDGDQIRVL--PCKHEYHMSCVDKWLKEIHGVCPLCRSNV 529
>Medtr4g116460.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:48244005-48247489 | 20130731
Length = 502
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 132 FQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQ-IKKVCPICSNEV 190
+A+ + E+C IC EYE+G++ V C+H YH C+ KWL+ I VCP+C + V
Sbjct: 429 VDAADGGNDAEQCYICLAEYEDGDQIRVL--PCKHEYHMSCVDKWLKEIHGVCPLCRSNV 486
>Medtr5g078900.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:33731973-33729291 | 20130731
Length = 378
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 117 GLSENEISSCLHPYTFQ--SAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCIS 174
GL E EI + T+Q + E+ + + C ICQ ++ +GE + C H YH +CI
Sbjct: 284 GLEEEEILMYIQQETYQPNTEETSTMNQTCTICQEDFIDGE--CIGRFDCNHIYHLNCIK 341
Query: 175 KWLQIKKVCPIC 186
+WL+ K VCPIC
Sbjct: 342 QWLEEKNVCPIC 353
>Medtr3g110190.1 | RING-H2 finger protein ATL4J | HC |
chr3:51190946-51189912 | 20130731
Length = 344
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 120 ENEISSCLHPYTFQSAE-SKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQ 178
E ++ L + F S + SK G+E C +C ++E+ EE L L +C+H +H +CI KWL+
Sbjct: 68 EQKVIETLPFFKFSSLKGSKQGLE-CTVCLSKFED-EEILRLLPKCKHAFHMNCIDKWLE 125
Query: 179 IKKVCPICSNEVSTSNM 195
CP+C V S++
Sbjct: 126 SHSTCPLCRYMVEESDI 142
>Medtr5g026260.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr5:10787644-10782997 | 20130731
Length = 560
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQ-IKKVCPICSNEVSTSN 194
C IC VEYE+G+ V C H +H CI KWL+ + +VCP+C ++ S+
Sbjct: 505 CYICLVEYEDGDSMRVL--PCHHEFHTTCIDKWLKEVHRVCPLCRGDICISD 554
>Medtr3g088080.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr3:39930068-39929802 | 20130731
Length = 88
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 135 AESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSN 194
E ++ CVICQVE+ G E V C+H YH +CI +WL+ +CP+C + + TS
Sbjct: 29 VEDCDTMKMCVICQVEFNLGME--VTKMPCDHLYHHECIVQWLETSHMCPMCRHPLPTST 86
>Medtr4g110100.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:45852019-45853843 | 20130731
Length = 423
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSN 194
C +C+ E+ EE V L C H YHGDCI WL I+ CP+C E T +
Sbjct: 360 CAVCKDEFAVVEE--VKLLPCSHRYHGDCIMPWLGIRNTCPVCRCEFPTDD 408
>Medtr3g072630.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr3:32681229-32680243 | 20130731
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSN 194
C +CQ E+E G EA C+H YH DCI WL++ CPIC E+ S+
Sbjct: 221 CPVCQEEFEIGGEAREL--PCKHIYHSDCIVPWLRLHNSCPICRQEIPVSS 269
>Medtr1g070140.1 | RING-H2 zinc finger protein | HC |
chr1:30811056-30812078 | 20130731
Length = 340
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 115 KRGLSENEISSCLHPYTFQSAESKS-GIERCVICQVEYEEGEEALVALDQCEHPYHGDCI 173
RGL E+ I + + F E + + CV+C E++E ++ + L C H +H DCI
Sbjct: 101 NRGLDESVIRE-IPSFQFIKGECEDQSVYGCVVCLTEFQE-QDVIKILPNCNHAFHLDCI 158
Query: 174 SKWLQIKKVCPICSNEVS 191
WLQ CP+C + +S
Sbjct: 159 DIWLQTNSNCPLCRSSIS 176
>Medtr3g072630.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr3:32681229-32679334 | 20130731
Length = 338
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSN 194
C +CQ E+E G EA C+H YH DCI WL++ CPIC E+ S+
Sbjct: 221 CPVCQEEFEIGGEAREL--PCKHIYHSDCIVPWLRLHNSCPICRQEIPVSS 269
>Medtr6g087150.1 | RING-H2 finger protein ATL4J | HC |
chr6:33511896-33513722 | 20130731
Length = 376
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 117 GLSENEISSCLHPYTFQSAE-SKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
G+ + I S L + F S + SK G+E C IC ++E+ E L L +C+H +H DCI
Sbjct: 93 GIDKTAIES-LPFFKFSSLKGSKQGLE-CSICLSKFEDIE-ILRLLPKCKHAFHIDCIDH 149
Query: 176 WLQIKKVCPICSNEVS 191
WL+ CPIC ++V+
Sbjct: 150 WLEKHSSCPICRHKVN 165
>Medtr8g019710.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr8:7010138-7009722 | 20130731
Length = 138
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 9/87 (10%)
Query: 119 SENEISSCL----HPYTF--QSAESKSGIER--CVICQVEYEEGEEALVALDQCEHPYHG 170
S ++ S+C+ H TF A++ GI + CVIC ++E +E++ L C+H +H
Sbjct: 21 SNDKFSACMSLESHSITFLYNEADAAKGINQTECVICLTIFQE-DESVRKLHTCKHMFHT 79
Query: 171 DCISKWLQIKKVCPICSNEVSTSNMPS 197
CI KWL CP+C +++ P+
Sbjct: 80 SCIDKWLASHLGCPLCRSQIDQVTSPN 106
>Medtr5g016940.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr5:6125789-6128429 | 20130731
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 130 YTFQSAESKSGIER-CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPIC 186
Y Q+ E S + + C ICQ +Y +GE + C H YH DCI +W ++K CP C
Sbjct: 284 YIQQNTEETSTMNQTCTICQEDYIDGEH--IGRLHCTHIYHLDCIKQWFEVKNACPFC 339
>Medtr8g106240.1 | C3HC4-type RING zinc finger protein | HC |
chr8:44874738-44878306 | 20130731
Length = 354
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 117 GLSENEISSCLHPYTFQSAESKSG---IERCVICQVEYEEGEEALVALDQCEHPYHGDCI 173
GL E+EI + Q ++ S ++C ICQ E+E +E + C+H YH CI
Sbjct: 276 GLKEDEIEPYIRKTKLQFSDDASKHQVDKKCSICQEEFEADDE--LGRLNCDHLYHFQCI 333
Query: 174 SKWLQIKKVCPICSNEVST 192
+W+ K CP+C +V+
Sbjct: 334 QQWVAHKNFCPVCKQQVAA 352
>Medtr1g009680.1 | zinc finger, C3HC4 type (RING finger) protein,
putative | HC | chr1:1431581-1436375 | 20130731
Length = 481
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIE---------RCVICQVEYEEGEEALVALDQCEHP 167
L+E +S L +QS S + +C ICQ EY +G+E V QC H
Sbjct: 392 ALTEEALSDSLKRSIYQSEPSDDAADYVNEEKDDTKCCICQEEYVDGDE--VGRLQCVHK 449
Query: 168 YHGDCISKWLQIKKVCPIC 186
+H CI WL++K CP C
Sbjct: 450 FHVLCIEDWLRLKNWCPFC 468
>Medtr7g079290.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | LC | chr7:30086096-30084201 | 20130731
Length = 213
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 117 GLSENEISSCLHPYTFQ----SAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDC 172
GL + I+S H +TF + + C IC +Y+E E L + QC H +H DC
Sbjct: 125 GLPRSIINS-YHTFTFNKNNIATINHDYDTVCSICISDYKESE-ILRMMPQCHHYFHRDC 182
Query: 173 ISKWLQIKKVCPICSNEV--STSNMPS 197
+ WL++ CP+C N + ++ N+P+
Sbjct: 183 VDTWLKVNGSCPVCRNLLLPASKNVPN 209
>Medtr5g041310.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr5:18157114-18158100 | 20130731
Length = 222
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 129 PYTFQSAESKSGIE-------RCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKK 181
P T +S E+ IE CV+C E+E G +V C+H +HG CI KWL I
Sbjct: 93 PATKESIEAMDKIEIEEGDGGECVVCLEEFEVG--GVVKEMPCKHRFHGKCIEKWLGIHG 150
Query: 182 VCPIC 186
CP+C
Sbjct: 151 SCPVC 155
>Medtr5g009190.1 | RING-H2 finger ATL21A-like protein | LC |
chr5:2142420-2140769 | 20130731
Length = 340
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 133 QSAES----KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSN 188
Q AES KS C IC EY+ E L ++ QC H +H DCI WL++ CP+C N
Sbjct: 279 QLAESGQLPKSIDNVCSICLSEYKP-METLRSIPQCNHHFHADCIDVWLKMNATCPLCKN 337
>Medtr2g436100.1 | RING-H2 zinc finger protein | HC |
chr2:13999588-13998012 | 20130731
Length = 288
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 116 RGLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
RGL I+S L + + + C +C E+E GE V L +C+H +H +CI
Sbjct: 92 RGLDATVIAS-LPLFFYDAKNYPENAPECAVCLSEFESGETGRV-LPKCKHSFHTECIDM 149
Query: 176 WLQIKKVCPICSNEV 190
W CP+C V
Sbjct: 150 WFHSHDTCPLCRAPV 164
>Medtr1g011380.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr1:2002136-1996826 | 20130731
Length = 403
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVS 191
C IC +YE +E L L C H +H DC+ KWL+I +CP+C +EV
Sbjct: 341 CCICLAKYENNDE-LREL-PCSHLFHKDCVDKWLKINALCPLCKSEVG 386
>Medtr4g017500.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:5470381-5470727 | 20130731
Length = 85
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 141 IERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSN 194
I+ C+IC++E+++ ++ + + QC+H YH DCI WL IK C I E TS
Sbjct: 30 IDACIICKIEFKDQKK--IEIPQCKHEYHVDCIKNWLVIKNECHIFKTEAYTST 81
>Medtr5g009200.1 | RING-H2 finger ATL21A-like protein | LC |
chr5:2146586-2145303 | 20130731
Length = 396
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 138 KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSN 188
KS C IC EY+ E L ++ QC H +H DCI WL++ CP+C N
Sbjct: 344 KSIDNVCSICLGEYKP-METLRSIPQCNHHFHADCIDVWLKMNATCPLCRN 393
>Medtr5g009210.1 | RING-H2 finger ATL21A-like protein | LC |
chr5:2151891-2149778 | 20130731
Length = 361
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSN 188
C IC EY+ E L ++ QC H +H DCI WL++ CP+C N
Sbjct: 315 CSICLSEYKP-METLRSIPQCNHHFHADCIDVWLKMNATCPLCRN 358
>Medtr1g043410.1 | RING-H2 zinc finger protein | HC |
chr1:16294568-16295633 | 20130731
Length = 321
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 116 RGLSENEISS--CLHPYTFQSAESKSGIER-CVICQVEYEEGEEALVALDQCEHPYHGDC 172
RGL ++ I+S +H Y + + GI C C E++E +E L + C H +H DC
Sbjct: 93 RGLEQSVINSIPVIH-YKLEKDYGELGISSECAFCLSEFQE-DEKLRVIPNCNHLFHIDC 150
Query: 173 ISKWLQIKKVCPICSNEVSTS 193
+ WLQ CP+C +VS +
Sbjct: 151 VDIWLQNNANCPLCRRKVSMT 171
>Medtr7g096690.1 | RING-H2 zinc finger protein | HC |
chr7:38807386-38806219 | 20130731
Length = 324
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 116 RGLSENEISSCLHPYTFQSAESKS----GIERCVICQVEYEEGEEALVALDQCEHPYHGD 171
RG+ E+ I + + F E ++ CV+C ++E + L L C H +H D
Sbjct: 69 RGVDESVIQG-IPTFQFTKGEGDDDNHQSVKGCVVCLNSFQE-HDMLKVLPNCSHHFHLD 126
Query: 172 CISKWLQIKKVCPICSNEVS-TSNMPSN 198
CI+ WLQ CP+C +S + P N
Sbjct: 127 CINIWLQTNANCPLCRTSISGNTQFPMN 154
>Medtr5g041330.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr5:18160913-18161896 | 20130731
Length = 218
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 129 PYTFQSAESKSGIE-------RCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKK 181
P T +S E+ IE CV+C E+E G +V C+H +HG CI KWL I
Sbjct: 83 PATKESIEAMEKIEIEEGDGGECVVCLEEFEVG--GVVKEMPCKHRFHGKCIEKWLGIHG 140
Query: 182 VCPIC 186
CP+C
Sbjct: 141 SCPVC 145
>Medtr8g066780.1 | anaphase-promoting complex subunit 11 RING-H2
finger protein | HC | chr8:27772738-27770951 | 20130731
Length = 356
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 117 GLSENEISS-CLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
GL + +I S + Y A + + C +C E+++ +E++ L C H +H CI
Sbjct: 114 GLDDAQIKSIAVFSYKKGDAFFSTTVTDCSVCLSEFQD-DESVRLLPMCNHVFHLPCIDT 172
Query: 176 WLQIKKVCPICSNEVSTSN 194
WL+ CP+C + V TSN
Sbjct: 173 WLKSNSSCPLCRSSVFTSN 191
>Medtr8g099515.1 | RING-H2 finger protein ATL21A, putative | HC |
chr8:42009468-42013480 | 20130731
Length = 408
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 138 KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSN--EVSTSNM 195
K+ C IC EY+ +E L ++ +C H +H CI +WL++ CPIC N E +S
Sbjct: 331 KANDNTCSICLSEYQP-KETLRSIPECNHYFHAACIDEWLKMNGTCPICRNSPETYSSTG 389
Query: 196 PS 197
PS
Sbjct: 390 PS 391
>Medtr2g097620.1 | zinc finger, C3HC4 type (RING finger) protein,
putative | HC | chr2:41698510-41696642 | 20130731
Length = 355
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
C +C+ ++E G EA C H YH DCI WL ++ CP+C +E+
Sbjct: 189 CAVCKEQFELGSEARKM--PCNHLYHSDCILPWLSMRNSCPVCRHEL 233
>Medtr8g091560.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr8:38207315-38209834 | 20130731
Length = 228
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWL---QIKKVCPICSNEVSTSNMPS 197
C +C E+EEG+ +V CEH +H DC+ KW Q CP+C N+V + ++ S
Sbjct: 68 CRVCLSEFEEGD--IVRSLNCEHTFHKDCLDKWFLQEQYCATCPLCRNKVLSDDVVS 122