Miyakogusa Predicted Gene

Lj0g3v0259169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259169.1 Non Characterized Hit- tr|G7KHT3|G7KHT3_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,49.23,0.000000001,UBN2_3,NULL,CUFF.17065.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g461050.1 | hypothetical protein | LC | chr4:22466787-2246...    50   5e-07
Medtr7g024770.1 | hypothetical protein | LC | chr7:8173121-81729...    49   1e-06
Medtr4g048330.1 | hypothetical protein | LC | chr4:17127732-1712...    47   4e-06

>Medtr4g461050.1 | hypothetical protein | LC |
          chr4:22466787-22464225 | 20130731
          Length = 397

 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/40 (52%), Positives = 30/40 (75%)

Query: 19 YYIHPNENLSLVLVTPILDGSNYHSWTRAMEMSLQMKNKF 58
          +++HP++ LS + V+PILDGSNYHS  R+M  +L  K KF
Sbjct: 24 FFVHPSDGLSSITVSPILDGSNYHSPARSMRRALGGKMKF 63


>Medtr7g024770.1 | hypothetical protein | LC |
          chr7:8173121-8172927 | 20130731
          Length = 50

 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 29/39 (74%)

Query: 19 YYIHPNENLSLVLVTPILDGSNYHSWTRAMEMSLQMKNK 57
          +Y++P+EN +  LV P  DG  YHSW+R+++ ++ MKNK
Sbjct: 11 FYVYPSENPTASLVNPFFDGRIYHSWSRSLKKAIIMKNK 49


>Medtr4g048330.1 | hypothetical protein | LC |
          chr4:17127732-17129246 | 20130731
          Length = 422

 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 5/57 (8%)

Query: 4  QSPITRENLQDSTHD--YYIHPNENLSLVLVTPILDGSNYHSWTRAMEMSLQMKNKF 58
          Q+PI    +Q +  D  +Y+HP+E  + V VTP+L  SNY +W+R+M+ +L  KN F
Sbjct: 5  QAPII---VQQANTDSVFYVHPSEGPNSVAVTPLLTDSNYLAWSRSMKRALGAKNNF 58