Miyakogusa Predicted Gene

Lj0g3v0259029.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259029.1 tr|A9TL62|A9TL62_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_170683,33.33,0.0000000000001, ,CUFF.17052.1
         (167 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0007s0220.1 | kinase superfamily protein | HC | scaffold000...   226   6e-60

>Medtr0007s0220.1 | kinase superfamily protein | HC |
           scaffold0007:149553-154087 | 20130731
          Length = 1008

 Score =  226 bits (577), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 105/170 (61%), Positives = 134/170 (78%), Gaps = 4/170 (2%)

Query: 1   MLLQDQWPNVTGFINSYCLWRGEETVHVKQGQPDPSSTLVSKLHWTYMDLPYMLGYYAVG 60
           +LLQD+WPNV+GF+N++CLWRGEE    K+   +PSST++ KL W+Y+DLPY+LGYYA+G
Sbjct: 649 LLLQDEWPNVSGFVNNFCLWRGEECEEFKENIQNPSSTIIQKLLWSYLDLPYILGYYAIG 708

Query: 61  KTVTFCALSTSSDANGIINRTDLLEMNLATPSDRLKAMVPCFRIGLLLHVLSKRCLSIGN 120
             VTFCALS S + +G I RTDL ++NL TPS+R KA+ PCFRIG+LL +LSK C ++  
Sbjct: 709 NKVTFCALSKSQE-DGKIIRTDLHQVNLTTPSERFKALGPCFRIGILLSMLSKACSNMQK 767

Query: 121 ---CYSDFQRVYLGHGVVTEMTPNTCTRVFSEKRKWAAVKEVYEILDHRI 167
               YSDF+R   G GV+ EMTPNTC RVF EKRK+++VKEVYEILDHRI
Sbjct: 768 GSFVYSDFERYSFGQGVLIEMTPNTCKRVFLEKRKFSSVKEVYEILDHRI 817