Miyakogusa Predicted Gene
- Lj0g3v0258939.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0258939.1 Non Characterized Hit- tr|K3Z576|K3Z576_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si021694,33.72,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.17174.1
(414 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g077190.1 | hypothetical protein | HC | chr1:34432907-3445... 504 e-143
Medtr1g077190.2 | hypothetical protein | HC | chr1:34432907-3445... 491 e-139
Medtr8g010360.1 | hypothetical protein | HC | chr8:2669120-26789... 79 6e-15
Medtr8g010360.2 | hypothetical protein | HC | chr8:2669122-26789... 79 6e-15
>Medtr1g077190.1 | hypothetical protein | HC |
chr1:34432907-34450619 | 20130731
Length = 753
Score = 504 bits (1299), Expect = e-143, Method: Compositional matrix adjust.
Identities = 280/437 (64%), Positives = 322/437 (73%), Gaps = 38/437 (8%)
Query: 1 MENGHDGKLAEKFSGLAINQQHGQQG-----VHD--QSNLSSNHNESLYQVMKAVESAEV 53
MENG+DGKLA+KFSGL IN Q+GQQ VHD Q + ++ +N++L+QVMKAVE+AE
Sbjct: 1 MENGYDGKLADKFSGLGINNQNGQQQQTQQHVHDDHQPDNNNTNNDNLFQVMKAVEAAEA 60
Query: 54 TIKQQ---------------------RRNEQVDQNSHP---WKEQVYGSYEARQSIPSSA 89
TIKQQ R E +D+ S P WKE +G+YEARQS PSS
Sbjct: 61 TIKQQVEENNRLRSELLGKIQELEKYRLYEPLDKKSSPVAPWKEPGHGTYEARQSFPSSG 120
Query: 90 ISNTSNYSGSSEINGTLRVQPNERLPVENTGNSQLSSPFTRSISPNRHLLGGDLDPQFNP 149
N+ +S+INGTLRV PN++LPV+N G+SQLSSPF RSISP+ HL GD D +F+
Sbjct: 121 -----NHFENSQINGTLRVHPNDQLPVDNVGHSQLSSPFMRSISPSMHLPEGDHDSRFSS 175
Query: 150 PRQGLTPMAETNNSNTSLQQDLAIKVXXXXXXXXXXXKHLADYAAKEAQIRNEKYVLDKR 209
PRQGL M ETNNSN+ L+QDLAIK KHLADY+AKE+QIRNEKYVL+KR
Sbjct: 176 PRQGLMAMPETNNSNSLLKQDLAIKAREHEEEIILLRKHLADYSAKESQIRNEKYVLEKR 235
Query: 210 IAYMRVAFDQQQQDLVDAASKALSYRQDVIEENIRLTYALQDAQQERSTFVSSLVPLLAE 269
IAYMR+AFDQQQQDLVDAASKALSYRQD+IEENIRLTYALQDAQQERSTFVSSL+PLLAE
Sbjct: 236 IAYMRLAFDQQQQDLVDAASKALSYRQDIIEENIRLTYALQDAQQERSTFVSSLLPLLAE 295
Query: 270 YSLQPNVLDAQSIVSNVKVLFKHXXXXXXXXXXXXXXXXYQLTPWRSDMNQNHATAATQS 329
YSLQP V DAQSIVSNVKVLFKH YQ+TPWRSDM NH ATQS
Sbjct: 296 YSLQPPVPDAQSIVSNVKVLFKHLQEKLYRTESKLKESQYQMTPWRSDM--NHTNVATQS 353
Query: 330 PSHSIGAPLATSNKNGLELVPRHIYSQVKTQVSVDTQAGTDWGMLGRHQSGLGGGVASNV 389
P +SIGAPLATSNKN LELVP+H YSQV TQ VD QAGT W ++GR+QSG+GGG+A+NV
Sbjct: 354 PLNSIGAPLATSNKNSLELVPQHRYSQVMTQAPVDPQAGTGWDVMGRYQSGIGGGLAANV 413
Query: 390 DADDLERYSPLASRGIL 406
DADDL RYSPL SR L
Sbjct: 414 DADDLGRYSPLGSRNSL 430
>Medtr1g077190.2 | hypothetical protein | HC |
chr1:34432907-34450619 | 20130731
Length = 747
Score = 491 bits (1264), Expect = e-139, Method: Compositional matrix adjust.
Identities = 276/437 (63%), Positives = 317/437 (72%), Gaps = 44/437 (10%)
Query: 1 MENGHDGKLAEKFSGLAINQQHGQQG-----VHD--QSNLSSNHNESLYQVMKAVESAEV 53
MENG+DGKLA+KFSGL IN Q+GQQ VHD Q + ++ +N++L+QVMKAVE+AE
Sbjct: 1 MENGYDGKLADKFSGLGINNQNGQQQQTQQHVHDDHQPDNNNTNNDNLFQVMKAVEAAEA 60
Query: 54 TIKQQ---------------------RRNEQVDQNSHP---WKEQVYGSYEARQSIPSSA 89
TIKQQ R E +D+ S P WKE +G+YEARQS PSS
Sbjct: 61 TIKQQVEENNRLRSELLGKIQELEKYRLYEPLDKKSSPVAPWKEPGHGTYEARQSFPSSG 120
Query: 90 ISNTSNYSGSSEINGTLRVQPNERLPVENTGNSQLSSPFTRSISPNRHLLGGDLDPQFNP 149
N+ +S+INGTLRV PN++LPV+N G+SQLSSPF R HL GD D +F+
Sbjct: 121 -----NHFENSQINGTLRVHPNDQLPVDNVGHSQLSSPFMR------HLPEGDHDSRFSS 169
Query: 150 PRQGLTPMAETNNSNTSLQQDLAIKVXXXXXXXXXXXKHLADYAAKEAQIRNEKYVLDKR 209
PRQGL M ETNNSN+ L+QDLAIK KHLADY+AKE+QIRNEKYVL+KR
Sbjct: 170 PRQGLMAMPETNNSNSLLKQDLAIKAREHEEEIILLRKHLADYSAKESQIRNEKYVLEKR 229
Query: 210 IAYMRVAFDQQQQDLVDAASKALSYRQDVIEENIRLTYALQDAQQERSTFVSSLVPLLAE 269
IAYMR+AFDQQQQDLVDAASKALSYRQD+IEENIRLTYALQDAQQERSTFVSSL+PLLAE
Sbjct: 230 IAYMRLAFDQQQQDLVDAASKALSYRQDIIEENIRLTYALQDAQQERSTFVSSLLPLLAE 289
Query: 270 YSLQPNVLDAQSIVSNVKVLFKHXXXXXXXXXXXXXXXXYQLTPWRSDMNQNHATAATQS 329
YSLQP V DAQSIVSNVKVLFKH YQ+TPWRSDM NH ATQS
Sbjct: 290 YSLQPPVPDAQSIVSNVKVLFKHLQEKLYRTESKLKESQYQMTPWRSDM--NHTNVATQS 347
Query: 330 PSHSIGAPLATSNKNGLELVPRHIYSQVKTQVSVDTQAGTDWGMLGRHQSGLGGGVASNV 389
P +SIGAPLATSNKN LELVP+H YSQV TQ VD QAGT W ++GR+QSG+GGG+A+NV
Sbjct: 348 PLNSIGAPLATSNKNSLELVPQHRYSQVMTQAPVDPQAGTGWDVMGRYQSGIGGGLAANV 407
Query: 390 DADDLERYSPLASRGIL 406
DADDL RYSPL SR L
Sbjct: 408 DADDLGRYSPLGSRNSL 424
>Medtr8g010360.1 | hypothetical protein | HC | chr8:2669120-2678964
| 20130731
Length = 538
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 67/103 (65%)
Query: 187 KHLADYAAKEAQIRNEKYVLDKRIAYMRVAFDQQQQDLVDAASKALSYRQDVIEENIRLT 246
+ +A KE Q+ NEK L++ + +R+A D +Q + + +AS L+ R+ +EEN++L
Sbjct: 71 EQIAVSCMKELQLVNEKCKLEREFSELRMAIDDKQNEAITSASNDLARRKGYLEENLKLA 130
Query: 247 YALQDAQQERSTFVSSLVPLLAEYSLQPNVLDAQSIVSNVKVL 289
+ L+ A+ ER F+SS++ LLAEY L P V++A S+ + VK L
Sbjct: 131 HDLKVAEDERYIFMSSMLGLLAEYGLWPRVMNASSVSNYVKHL 173
>Medtr8g010360.2 | hypothetical protein | HC | chr8:2669122-2678964
| 20130731
Length = 529
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 67/103 (65%)
Query: 187 KHLADYAAKEAQIRNEKYVLDKRIAYMRVAFDQQQQDLVDAASKALSYRQDVIEENIRLT 246
+ +A KE Q+ NEK L++ + +R+A D +Q + + +AS L+ R+ +EEN++L
Sbjct: 71 EQIAVSCMKELQLVNEKCKLEREFSELRMAIDDKQNEAITSASNDLARRKGYLEENLKLA 130
Query: 247 YALQDAQQERSTFVSSLVPLLAEYSLQPNVLDAQSIVSNVKVL 289
+ L+ A+ ER F+SS++ LLAEY L P V++A S+ + VK L
Sbjct: 131 HDLKVAEDERYIFMSSMLGLLAEYGLWPRVMNASSVSNYVKHL 173