Miyakogusa Predicted Gene

Lj0g3v0258459.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0258459.3 Non Characterized Hit- tr|Q8GXL0|Q8GXL0_ARATH
Putative villin 1 VLN1 OS=Arabidopsis thaliana
GN=At2g,30.48,0.004,seg,NULL; GELSOLIN,Gelsolin; no description,NULL;
Gelsolin homology domain,Gelsolin; VILLIN 1-4,NULL,CUFF.17403.3
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g091460.2 | villin | HC | chr7:36172160-36160645 | 20130731     193   6e-50
Medtr7g091460.1 | villin | HC | chr7:36172702-36160645 | 20130731     193   6e-50
Medtr3g463530.1 | actin filament bundling protein P-115-ABP | HC...    99   2e-21
Medtr3g463530.2 | actin filament bundling protein P-115-ABP | HC...    99   2e-21
Medtr4g127660.1 | actin filament bundling protein P-115-ABP | HC...    97   5e-21
Medtr2g036860.1 | actin filament bundling protein P-115-ABP | HC...    91   4e-19
Medtr2g036860.2 | actin filament bundling protein P-115-ABP | HC...    91   4e-19
Medtr3g463530.3 | actin filament bundling protein P-115-ABP | HC...    83   1e-16

>Medtr7g091460.2 | villin | HC | chr7:36172160-36160645 | 20130731
          Length = 983

 Score =  193 bits (490), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 90/127 (70%), Positives = 102/127 (80%), Gaps = 1/127 (0%)

Query: 15  VKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAASLEG 74
           +++EEVYNFSQ             HAEVF+WIG  VDPKEKQN FEI QKYI+ A SL+G
Sbjct: 637 LQIEEVYNFSQDDLLTEDILILDTHAEVFVWIGQCVDPKEKQNAFEIAQKYIEKAGSLDG 696

Query: 75  LSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEKSNGSSL 134
           LS HVPLYKVTEGNEPCFFTTYF+WDHAKA +QGNSF KK++LLFG+GH+VEEKSNGSS 
Sbjct: 697 LSPHVPLYKVTEGNEPCFFTTYFTWDHAKATVQGNSFTKKLALLFGIGHSVEEKSNGSSQ 756

Query: 135 GGA-RQR 140
           GG  RQR
Sbjct: 757 GGGPRQR 763


>Medtr7g091460.1 | villin | HC | chr7:36172702-36160645 | 20130731
          Length = 983

 Score =  193 bits (490), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 90/127 (70%), Positives = 102/127 (80%), Gaps = 1/127 (0%)

Query: 15  VKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAASLEG 74
           +++EEVYNFSQ             HAEVF+WIG  VDPKEKQN FEI QKYI+ A SL+G
Sbjct: 637 LQIEEVYNFSQDDLLTEDILILDTHAEVFVWIGQCVDPKEKQNAFEIAQKYIEKAGSLDG 696

Query: 75  LSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEKSNGSSL 134
           LS HVPLYKVTEGNEPCFFTTYF+WDHAKA +QGNSF KK++LLFG+GH+VEEKSNGSS 
Sbjct: 697 LSPHVPLYKVTEGNEPCFFTTYFTWDHAKATVQGNSFTKKLALLFGIGHSVEEKSNGSSQ 756

Query: 135 GGA-RQR 140
           GG  RQR
Sbjct: 757 GGGPRQR 763


>Medtr3g463530.1 | actin filament bundling protein P-115-ABP | HC |
           chr3:25453386-25461095 | 20130731
          Length = 884

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 4/128 (3%)

Query: 16  KVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIG-HSVDPKEKQNTFEIGQKYIDMAASLEG 74
           KV+E+YN++Q               E++IW+G HSV  K KQ    +G K+++M   +EG
Sbjct: 630 KVKEIYNYTQDDLITEDVLLLDCQREIYIWVGLHSV-VKSKQEALNLGLKFLEMDVLVEG 688

Query: 75  LSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEK--SNGS 132
           LSL VP+Y V EG EP FFT +F WDH+KA I GNSF++K+++L G           +GS
Sbjct: 689 LSLEVPIYVVMEGYEPPFFTRFFLWDHSKANIIGNSFERKLAILKGNSRDSTPNGHKSGS 748

Query: 133 SLGGARQR 140
            +   R+R
Sbjct: 749 IISNGRRR 756


>Medtr3g463530.2 | actin filament bundling protein P-115-ABP | HC |
           chr3:25454593-25459898 | 20130731
          Length = 808

 Score = 99.0 bits (245), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 4/128 (3%)

Query: 16  KVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIG-HSVDPKEKQNTFEIGQKYIDMAASLEG 74
           KV+E+YN++Q               E++IW+G HSV  K KQ    +G K+++M   +EG
Sbjct: 630 KVKEIYNYTQDDLITEDVLLLDCQREIYIWVGLHSV-VKSKQEALNLGLKFLEMDVLVEG 688

Query: 75  LSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEK--SNGS 132
           LSL VP+Y V EG EP FFT +F WDH+KA I GNSF++K+++L G           +GS
Sbjct: 689 LSLEVPIYVVMEGYEPPFFTRFFLWDHSKANIIGNSFERKLAILKGNSRDSTPNGHKSGS 748

Query: 133 SLGGARQR 140
            +   R+R
Sbjct: 749 IISNGRRR 756


>Medtr4g127660.1 | actin filament bundling protein P-115-ABP | HC |
           chr4:53041132-53049570 | 20130731
          Length = 960

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 73/126 (57%), Gaps = 2/126 (1%)

Query: 15  VKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAASLEG 74
           ++V E++NFSQ             H+++F+W+G  VDPK +     IG+K+++    LE 
Sbjct: 636 LQVIEIHNFSQDDLMTEDIFILDCHSQIFVWVGQQVDPKRRVQALPIGEKFLEQDFLLET 695

Query: 75  LSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLF--GVGHAVEEKSNGS 132
           +S   P+Y V EG+EP FFT +F WD AK+ + GNS+Q+K++++   G    V+ K   S
Sbjct: 696 ISCSAPIYIVMEGSEPPFFTRFFKWDSAKSAMLGNSYQRKLAIMKNGGTPPLVKPKRRAS 755

Query: 133 SLGGAR 138
              G R
Sbjct: 756 VSYGGR 761


>Medtr2g036860.1 | actin filament bundling protein P-115-ABP | HC |
           chr2:15969223-15955481 | 20130731
          Length = 962

 Score = 90.9 bits (224), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 68/114 (59%)

Query: 15  VKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAASLEG 74
           +KV E+YNFSQ             ++++F+W+G  VD K +     IG+K+++    LE 
Sbjct: 634 LKVTEIYNFSQDDLMTEDIFILDCYSDIFVWVGQEVDSKSRMQALTIGEKFLENDFLLEK 693

Query: 75  LSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEK 128
           LS    +Y V EG+EP FFT +F+W+ AK+ + GNSFQ+K+ ++   G A  +K
Sbjct: 694 LSRVATIYVVMEGSEPPFFTRFFNWESAKSAMLGNSFQRKLKIVKNGGTAPLDK 747


>Medtr2g036860.2 | actin filament bundling protein P-115-ABP | HC |
           chr2:15969212-15955553 | 20130731
          Length = 962

 Score = 90.9 bits (224), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 68/114 (59%)

Query: 15  VKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAASLEG 74
           +KV E+YNFSQ             ++++F+W+G  VD K +     IG+K+++    LE 
Sbjct: 634 LKVTEIYNFSQDDLMTEDIFILDCYSDIFVWVGQEVDSKSRMQALTIGEKFLENDFLLEK 693

Query: 75  LSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEK 128
           LS    +Y V EG+EP FFT +F+W+ AK+ + GNSFQ+K+ ++   G A  +K
Sbjct: 694 LSRVATIYVVMEGSEPPFFTRFFNWESAKSAMLGNSFQRKLKIVKNGGTAPLDK 747


>Medtr3g463530.3 | actin filament bundling protein P-115-ABP | HC |
           chr3:25453412-25461095 | 20130731
          Length = 727

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 56/90 (62%), Gaps = 2/90 (2%)

Query: 16  KVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIG-HSVDPKEKQNTFEIGQKYIDMAASLEG 74
           KV+E+YN++Q               E++IW+G HSV  K KQ    +G K+++M   +EG
Sbjct: 630 KVKEIYNYTQDDLITEDVLLLDCQREIYIWVGLHSV-VKSKQEALNLGLKFLEMDVLVEG 688

Query: 75  LSLHVPLYKVTEGNEPCFFTTYFSWDHAKA 104
           LSL VP+Y V EG EP FFT +F WDH+KA
Sbjct: 689 LSLEVPIYVVMEGYEPPFFTRFFLWDHSKA 718