Miyakogusa Predicted Gene

Lj0g3v0258219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0258219.1 Non Characterized Hit- tr|I1IQ72|I1IQ72_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,50,0.0000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; coiled-coil,NULL,CUFF.16975.1
         (634 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g484960.1 | kinesin motor domain protein | HC | chr1:37843...   718   0.0  

>Medtr1g484960.1 | kinesin motor domain protein | HC |
            chr1:37843219-37826018 | 20130731
          Length = 1260

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/645 (62%), Positives = 477/645 (73%), Gaps = 22/645 (3%)

Query: 1    MSNINDEHFDFVSNVFMGVQEIMSEVQNSKEAVQSVMLIVDDATRSLSALRDMFLDFKTS 60
            + N++D + DF++ V MG+++IMSEVQNSKEAVQS +L+VDDAT+S S LR++FLDF+TS
Sbjct: 620  VGNVDDGNVDFITRVSMGIEDIMSEVQNSKEAVQSAILMVDDATKSFSTLRNIFLDFRTS 679

Query: 61   VAQDSAEQNLIWSNYQKLISCLREKVSTIENEKILLDSRLADLQKDLRETELDSKNSQNS 120
            ++QDS EQ LI+SN+QKL SCLR+ +S +ENEKILLDS+LA++QK  +E+ELD+++S NS
Sbjct: 680  ISQDSVEQKLIFSNHQKLNSCLRQTISDLENEKILLDSQLANIQKLHQESELDAQSSHNS 739

Query: 121  LQERLGQQELENEELISYLQTLEKDISGLTSSSVAKERETLRRDXXXXXXXXXXXXXXXX 180
            L ERLGQQELEN ELISY+QTLE+DIS LTSSSVAKE+ETLRRD                
Sbjct: 740  LLERLGQQELENGELISYIQTLEQDISCLTSSSVAKEKETLRRDLEKTKTRLKETEFKLK 799

Query: 181  XXVQEKTKLEGEKAHAEREIKRLHGQNSLLERDISKRDSLAGRRRDSIVERSGKMFDPKR 240
              +QEKTKLEGEKA AEREIKRLHGQ SLLERDI+KRDSLA RRRDS VE+S KMFDP++
Sbjct: 800  NAMQEKTKLEGEKACAEREIKRLHGQTSLLERDINKRDSLASRRRDSTVEKSSKMFDPQK 859

Query: 241  QKGVSFSMEQTLQEEHKKLEVFAFESETRITSLEEQVKAALKEKXXXXXXXXXXXXXXXX 300
             KG +FS+     EE+KKLEVFAFESETRITSLEE++ AALKEK                
Sbjct: 860  PKGPAFSL-----EEYKKLEVFAFESETRITSLEEEITAALKEKEEMISINEALNSELED 914

Query: 301  XXXXXXXSTSELCYLKEEISALKQSLEESVLNQEKLESSIKVLMEEKEELALQLTNSLLE 360
                   STSE+  LKEEISALKQ LEES +NQEK +SSIKVL EEKEELA+QLT++LLE
Sbjct: 915  LTEKLSTSTSEIYDLKEEISALKQRLEESDINQEKFKSSIKVLAEEKEELAMQLTDALLE 974

Query: 361  TEEERAIWSAKEKDVLLAIEEQATSNNVQITSLSTELSEVRNELESCREECRNLQGRLTI 420
             EEERAIWSAKEKD LLAIEEQA SNN Q TSLSTEL+EVR EL+SCREEC+  + RLTI
Sbjct: 975  IEEERAIWSAKEKDALLAIEEQARSNNEQHTSLSTELAEVRRELKSCREECKIFRERLTI 1034

Query: 421  SY----IKEQFSEKSLELDRPPNN---------LEMADAESKHSQKELHDCPEKEKANEI 467
            SY     KE+  E  L+ D    N         +     E +  + +L+ CPE E    I
Sbjct: 1035 SYENMLGKEKSRENVLDFDHMETNNDTNRQSQEISKPKFELQSIEHKLNGCPENEDG--I 1092

Query: 468  QRE-DHLNKGDNXXXXXXXXXXXXXXYEFENLKNKLSIVTKERDSLMNQMEDQQKHVMEV 526
            QRE   LNKGDN               EF+NLK+KLSIV +ERD L  +MEDQQKH++EV
Sbjct: 1093 QREVQALNKGDNLSILRELDTMSEFFIEFQNLKSKLSIVAEERDKLTTRMEDQQKHLVEV 1152

Query: 527  EFQPK-VQDELSRAKVHVEELSREISCMEVKMHVDKVTNNKETSKLRMRLRGTQAKLDAF 585
            EF  K  QDELS AK H+EELS +ISC+EVK+H DKVTN  ET+KLRMRLRGTQAKLDAF
Sbjct: 1153 EFLLKHCQDELSGAKNHIEELSHKISCIEVKIHADKVTNMNETAKLRMRLRGTQAKLDAF 1212

Query: 586  RCRYKEAIDESVLLNKKYGEAAENLKDQLASKAIEVLNLKKQLAV 630
            RCRYK AIDESV    KY EA+E LKD LAS+ +EVLNLKKQLA 
Sbjct: 1213 RCRYKGAIDESVSSKIKYREASEKLKDMLASQGLEVLNLKKQLAA 1257