Miyakogusa Predicted Gene

Lj0g3v0258199.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0258199.1 Non Characterized Hit- tr|D7MLC3|D7MLC3_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,50,0.00000000000001,seg,NULL; DUF1442,Protein of unknown
function DUF1442,CUFF.16971.1
         (116 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g023950.1 | DUF1442 family protein | HC | chr4:8171319-817...   129   6e-31
Medtr1g076800.1 | DUF1442 family protein | HC | chr1:34282105-34...    90   4e-19
Medtr6g060440.1 | DUF1442 family protein | HC | chr6:20762736-20...    80   5e-16
Medtr6g060390.1 | DUF1442 family protein | HC | chr6:20750761-20...    78   2e-15

>Medtr4g023950.1 | DUF1442 family protein | HC |
           chr4:8171319-8172599 | 20130731
          Length = 219

 Score =  129 bits (324), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 65/110 (59%), Positives = 75/110 (68%)

Query: 1   MSGWSAEKAKRAYIQALKMAKKGKEPDVAEFISALAAGNNAQLMVVANXXXXXXXXXXXX 60
           MS WS E AK+AY+QALKMAK+ KEPDVAEFISA+AAG NAQLMVVA+            
Sbjct: 1   MSEWSPENAKKAYLQALKMAKRDKEPDVAEFISAIAAGKNAQLMVVASANVASSTTLALA 60

Query: 61  XXXXXXXXXXXCVCCGENELQASKKALGVHRHGLEFVVGDAKCLLLGDYK 110
                       +  G+NELQASK+ALGVH+  +EFVVGDAK LLL DYK
Sbjct: 61  AASQQTHGRVIYISSGQNELQASKEALGVHKDSVEFVVGDAKTLLLNDYK 110


>Medtr1g076800.1 | DUF1442 family protein | HC |
           chr1:34282105-34283311 | 20130731
          Length = 222

 Score = 90.1 bits (222), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 48/111 (43%), Positives = 64/111 (57%)

Query: 1   MSGWSAEKAKRAYIQALKMAKKGKEPDVAEFISALAAGNNAQLMVVANXXXXXXXXXXXX 60
           M+ WSAE A +AY+  LKM +K KEP+VAEFISALAAGNNAQ+M+VA             
Sbjct: 1   MACWSAENATKAYLSTLKMGQKAKEPNVAEFISALAAGNNAQMMIVACANVADSTTLALI 60

Query: 61  XXXXXXXXXXXCVCCGENELQASKKALGVHRHGLEFVVGDAKCLLLGDYKE 111
                      C+     +L ASK  LG+  H ++F+VG A+ +L+ D  E
Sbjct: 61  AAANQTGGQVICIVPNHKDLIASKHVLGIASHQVQFMVGKAQEVLMLDQYE 111


>Medtr6g060440.1 | DUF1442 family protein | HC |
           chr6:20762736-20761390 | 20130731
          Length = 221

 Score = 79.7 bits (195), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 57/106 (53%)

Query: 1   MSGWSAEKAKRAYIQALKMAKKGKEPDVAEFISALAAGNNAQLMVVANXXXXXXXXXXXX 60
           M+ WSAE A +AY+  +KM +K KEP VAEFISA+AAGNNAQLMVV              
Sbjct: 1   MAYWSAENATKAYLSTMKMGQKAKEPAVAEFISAIAAGNNAQLMVVTCAGAADTTTLALV 60

Query: 61  XXXXXXXXXXXCVCCGENELQASKKALGVHRHGLEFVVGDAKCLLL 106
                      C+     +L  SKK LG   + ++F++G    L+L
Sbjct: 61  SAANQTNGKVICIVPTNEDLITSKKILGAASNQVQFMIGKEALLVL 106


>Medtr6g060390.1 | DUF1442 family protein | HC |
          chr6:20750761-20749382 | 20130731
          Length = 223

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 55/99 (55%)

Query: 1  MSGWSAEKAKRAYIQALKMAKKGKEPDVAEFISALAAGNNAQLMVVANXXXXXXXXXXXX 60
          M+ WSAE A +AY+  +KM +K KEP VAEFISA+AAGNNAQLMVVA             
Sbjct: 1  MAYWSAENATKAYLSTMKMGQKAKEPAVAEFISAIAAGNNAQLMVVACAGAADPTTLALV 60

Query: 61 XXXXXXXXXXXCVCCGENELQASKKALGVHRHGLEFVVG 99
                     C+     +L  SKK LG   + ++F++G
Sbjct: 61 AAANQTNGKVICIVPTIEDLITSKKILGAASNQVQFMIG 99