Miyakogusa Predicted Gene

Lj0g3v0258079.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0258079.1 Non Characterized Hit- tr|K4CQZ2|K4CQZ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,57.32,6e-19,seg,NULL; PROTEASE U48 CAAX PRENYL PROTEASE
RCE1,NULL,CUFF.16968.1
         (118 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g060300.1 | CAAX amino terminal protease family protein | ...   132   6e-32

>Medtr1g060300.1 | CAAX amino terminal protease family protein | HC
           | chr1:26237608-26244119 | 20130731
          Length = 316

 Score =  132 bits (333), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 1/90 (1%)

Query: 21  MDLQDGVVSKPVAVSACVAMALLYVASLYAPTVLFRLPPPSSLNSFMIRRFLCAAVSTVL 80
           MDLQ+  VSKP++V AC+AMALLYV +LYAPT L RLPPPSS  +FMIRRFLCA VST +
Sbjct: 1   MDLQNDAVSKPISVLACIAMALLYVVTLYAPTFLLRLPPPSSFTNFMIRRFLCAVVSTTI 60

Query: 81  SLFLSALILPV-TKELPYIFGAYGIRGDHI 109
           SLFL+ LILPV T++LPYI G YGIR DH+
Sbjct: 61  SLFLTPLILPVQTRDLPYILGVYGIRVDHM 90