Miyakogusa Predicted Gene
- Lj0g3v0257609.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0257609.1 CUFF.16946.1
(165 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g069345.1 | transducin/WD40 repeat protein | HC | chr1:299... 277 4e-75
Medtr3g449990.1 | transducin/WD40 repeat protein | HC | chr3:171... 120 6e-28
Medtr5g090420.1 | transducin/WD40 repeat protein | HC | chr5:393... 116 9e-27
Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC... 64 6e-11
Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC... 64 6e-11
Medtr1g072140.1 | transducin/WD40 repeat protein | HC | chr1:320... 60 7e-10
Medtr5g016350.2 | transducin family protein/WD-40 repeat protein... 60 1e-09
Medtr5g016350.1 | transducin family protein/WD-40 repeat protein... 60 1e-09
Medtr5g016370.1 | transducin family protein/WD-40 repeat protein... 59 2e-09
Medtr3g116500.5 | guanine nucleotide-binding protein beta subuni... 51 4e-07
Medtr3g116500.4 | guanine nucleotide-binding protein beta subuni... 51 4e-07
Medtr2g012630.1 | katanin p80 WD40 repeat subunit B1-like protei... 51 4e-07
Medtr3g116500.2 | guanine nucleotide-binding protein beta subuni... 51 4e-07
Medtr3g116500.1 | guanine nucleotide-binding protein beta subuni... 51 4e-07
Medtr3g116500.3 | guanine nucleotide-binding protein beta subuni... 51 4e-07
Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protei... 51 4e-07
Medtr4g119620.1 | transducin/WD40 repeat protein | HC | chr4:495... 50 8e-07
Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protei... 50 9e-07
>Medtr1g069345.1 | transducin/WD40 repeat protein | HC |
chr1:29955415-29960832 | 20130731
Length = 507
Score = 277 bits (708), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 136/172 (79%), Positives = 142/172 (82%), Gaps = 10/172 (5%)
Query: 4 LTEQLNSLWTVPSFFLGKWLVS----------KVQEDGKLTLKHTLFGHQSAVSFVAWSP 53
LT N +W V G +L S KVQEDGKLTLKHTL GHQ AVSFVAWSP
Sbjct: 212 LTGHKNEVWFVQFSNSGDYLASSSNDCTAIIWKVQEDGKLTLKHTLSGHQRAVSFVAWSP 271
Query: 54 DDTKLLTCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPNSKQFVCGSFDPEKGICM 113
DDTKLLTCGN EVLKLWDVETGTCKHTFGN GFVVSSCAWFPNS QFVCGSFDPEKGICM
Sbjct: 272 DDTKLLTCGNIEVLKLWDVETGTCKHTFGNDGFVVSSCAWFPNSTQFVCGSFDPEKGICM 331
Query: 114 WDCEGNEMRSWRGMRMPKVVDIAVTPDGEYLISIFLDKEIRILHLRTNAECV 165
WDC+GNE+R+WRGMRMPKVVD+ VTPDGEYLISIFLDKEIRILHL TNAE V
Sbjct: 332 WDCDGNELRAWRGMRMPKVVDLTVTPDGEYLISIFLDKEIRILHLATNAERV 383
>Medtr3g449990.1 | transducin/WD40 repeat protein | HC |
chr3:17129213-17120938 | 20130731
Length = 581
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 94/165 (56%), Gaps = 12/165 (7%)
Query: 9 NSLWTVPSFFLGKWLVS----------KVQEDGKLTLKHTLFGHQSAVSFVAWSPDDTKL 58
+ +W V GK+L + +V + L++KH L GHQ +VS V+WSP+ +L
Sbjct: 271 DEVWFVQFSHDGKYLATASNDRTAIIWEVDTNDGLSMKHKLSGHQKSVSSVSWSPNGQEL 330
Query: 59 LTCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPNSKQFVCGSFDPEKGICMWDCEG 118
LTCG +E ++ WDV TG C + G + SCAWFP K + G D K ICMW+ +G
Sbjct: 331 LTCGVEEAVRRWDVSTGKCLQVYEKNGSGLISCAWFPCGKYILSGLSD--KSICMWELDG 388
Query: 119 NEMRSWRGMRMPKVVDIAVTPDGEYLISIFLDKEIRILHLRTNAE 163
E+ SW+G + K+ D+ +T DGE+++SI + I + + T E
Sbjct: 389 KEVESWKGQKTLKISDLEITGDGEHILSICKENAILLFNKETKVE 433
>Medtr5g090420.1 | transducin/WD40 repeat protein | HC |
chr5:39373338-39377755 | 20130731
Length = 572
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 9 NSLWTVPSFFLGKWLVSKVQEDGKLT---------LKHTLFGHQSAVSFVAWSPDDTKLL 59
+ +W V GK+L S + + +KH L GHQ +S V+WSP+D +LL
Sbjct: 265 DEVWFVQFSHNGKYLASASNDQTAIIWEVGVNGVCVKHRLSGHQKPISSVSWSPNDEELL 324
Query: 60 TCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPNSKQFVCGSFDPEKGICMWDCEGN 119
TCG +E ++ WDV TG C + G + SC WFP+ K + G D K ICMW+ +G
Sbjct: 325 TCGVEESIRRWDVSTGKCLQIYEKAGAGLVSCTWFPSGKHILSGLSD--KSICMWELDGK 382
Query: 120 EMRSWRGMRMPKVVDIAVTPDGEYLISIFLDKEIRILHLRTNAE 163
E+ SW+G + K+ D+ +T DGE +ISI + + + T E
Sbjct: 383 EVESWKGQKSLKISDLDITADGEEIISICKPNTVLLFNKETKDE 426
>Medtr4g095058.2 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623829 | 20130731
Length = 576
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 37 HTLFGHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPN 96
T GHQ V+ V W P T L +C + K+W V+ H F + + W P
Sbjct: 405 QTFAGHQGEVNCVKWDPTGTLLASCSDDITAKIWSVKQDKYLHDFREHSKEIYTIRWSPT 464
Query: 97 -------SKQFVCGSFDPEKGICMWDCE-GNEMRSWRGMRMPKVVDIAVTPDGEYLISIF 148
+K+ + S + + +WD E G + S G R P V +A +P+GEY+ S
Sbjct: 465 GPGTNNPNKKLLLASASFDSTVKLWDIELGKLIHSLNGHRHP-VYSVAFSPNGEYIASGS 523
Query: 149 LDKEIRILHLR 159
LDK + I L+
Sbjct: 524 LDKSLHIWSLK 534
>Medtr4g095058.1 | F-box-like/WD repeat TBL1XR1-like protein | HC |
chr4:39607610-39623874 | 20130731
Length = 578
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 37 HTLFGHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPN 96
T GHQ V+ V W P T L +C + K+W V+ H F + + W P
Sbjct: 407 QTFAGHQGEVNCVKWDPTGTLLASCSDDITAKIWSVKQDKYLHDFREHSKEIYTIRWSPT 466
Query: 97 -------SKQFVCGSFDPEKGICMWDCE-GNEMRSWRGMRMPKVVDIAVTPDGEYLISIF 148
+K+ + S + + +WD E G + S G R P V +A +P+GEY+ S
Sbjct: 467 GPGTNNPNKKLLLASASFDSTVKLWDIELGKLIHSLNGHRHP-VYSVAFSPNGEYIASGS 525
Query: 149 LDKEIRILHLR 159
LDK + I L+
Sbjct: 526 LDKSLHIWSLK 536
>Medtr1g072140.1 | transducin/WD40 repeat protein | HC |
chr1:32005480-32003360 | 20130731
Length = 316
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 6/143 (4%)
Query: 14 VPSFFLGKWLVSKVQEDGKLTLKHTLFGHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVE 73
+ S L K L+ + L+L H L GH ++ +AWS D + + + + L++WD
Sbjct: 42 LASASLDKTLI--IYSSTTLSLLHRLTGHSEGINDIAWSSDSHYICSASDDKTLRIWDAN 99
Query: 74 TGTCKHTFGNQGFVVSSCAWFPNSKQFVCGSFDPEKGICMWDCE-GNEMRSWRGMRMPKV 132
TG C T G V + P S V GSFD + + +W+ + G + + MP V
Sbjct: 100 TGDCVKTLRGHGHNVFCVNFNPQSNYIVSGSFD--ETVRVWEVKTGKSVHVIKAHAMP-V 156
Query: 133 VDIAVTPDGEYLISIFLDKEIRI 155
+ DG ++S D +I
Sbjct: 157 TSVDFNRDGSLIVSGSHDGSCKI 179
>Medtr5g016350.2 | transducin family protein/WD-40 repeat protein |
HC | chr5:5861710-5850637 | 20130731
Length = 519
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 38 TLFGHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPN- 96
T GHQS V+ + W P + L +C + K+W ++ H F V + W P
Sbjct: 349 TFEGHQSEVNCIKWDPTGSLLASCSDDNTAKIWSMKQDKYIHDFREHSKEVYTIRWSPTG 408
Query: 97 ------SKQFVCGSFDPEKGICMWDCE-GNEMRSWRGMRMPKVVDIAVTPDGEYLISIFL 149
+K+ V S + + +WD E G + S G R V +A +P+GEYL S
Sbjct: 409 PGTNNPNKKLVLASASFDSTVKLWDAELGKLIYSLSGHR-DGVYSVAFSPNGEYLASGSP 467
Query: 150 DKEIRILHL 158
DK I I L
Sbjct: 468 DKSINIWSL 476
>Medtr5g016350.1 | transducin family protein/WD-40 repeat protein |
HC | chr5:5861710-5850637 | 20130731
Length = 583
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 38 TLFGHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPN- 96
T GHQS V+ + W P + L +C + K+W ++ H F V + W P
Sbjct: 413 TFEGHQSEVNCIKWDPTGSLLASCSDDNTAKIWSMKQDKYIHDFREHSKEVYTIRWSPTG 472
Query: 97 ------SKQFVCGSFDPEKGICMWDCE-GNEMRSWRGMRMPKVVDIAVTPDGEYLISIFL 149
+K+ V S + + +WD E G + S G R V +A +P+GEYL S
Sbjct: 473 PGTNNPNKKLVLASASFDSTVKLWDAELGKLIYSLSGHR-DGVYSVAFSPNGEYLASGSP 531
Query: 150 DKEIRILHLR 159
DK I I L
Sbjct: 532 DKSINIWSLN 541
>Medtr5g016370.1 | transducin family protein/WD-40 repeat protein |
HC | chr5:5874227-5866099 | 20130731
Length = 595
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Query: 38 TLFGHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPN- 96
T GHQ V+ + W P + L +C + K+W ++ H F + + W P
Sbjct: 425 TFAGHQGEVNCIKWDPTGSILASCSDDNTAKIWSMKQDKYIHDFREHSKEIYAIRWSPTG 484
Query: 97 ------SKQFVCGSFDPEKGICMWDCE-GNEMRSWRGMRMPKVVDIAVTPDGEYLISIFL 149
+K+ V S + + +WD E G + S G R +V I+ +P+GEYL S
Sbjct: 485 PGTNNPNKKLVLASASCDSTVKLWDAELGKLIHSLNGHR-DRVYTISFSPNGEYLASGSP 543
Query: 150 DKEIRILHL 158
DK I I L
Sbjct: 544 DKSINIWSL 552
>Medtr3g116500.5 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr3:54501139-54496286 |
20130731
Length = 268
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Query: 23 LVSKVQEDGKLTLKHTLFGHQSAVSFVAWSP-DDTKLLTCGNKEVLKLWDVETGTCKHTF 81
L S DG L + L GH+ VS + P +DT L+T + LWD+ TG F
Sbjct: 26 LNSPTDRDGNLNVSRMLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRTSVF 85
Query: 82 GNQ------GFVVSSCAWFPNSKQFVCGSFDPEKGICMWDCE--GNEMRSWRGMRMPKVV 133
G + V+S NSK FV GS D +WD +R++ G V
Sbjct: 86 GGEFQSGHTADVLSISINGSNSKMFVSGSCDATAR--LWDTRVASRAVRTFHGHE-GDVN 142
Query: 134 DIAVTPDGEYLISIFLDKEIRILHLRTNAE 163
+ PDG + D R+ +RT +
Sbjct: 143 SVKFFPDGNRFGTGSEDGTCRLFDIRTGHQ 172
>Medtr3g116500.4 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr3:54501139-54496286 |
20130731
Length = 268
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Query: 23 LVSKVQEDGKLTLKHTLFGHQSAVSFVAWSP-DDTKLLTCGNKEVLKLWDVETGTCKHTF 81
L S DG L + L GH+ VS + P +DT L+T + LWD+ TG F
Sbjct: 26 LNSPTDRDGNLNVSRMLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRTSVF 85
Query: 82 GNQ------GFVVSSCAWFPNSKQFVCGSFDPEKGICMWDCE--GNEMRSWRGMRMPKVV 133
G + V+S NSK FV GS D +WD +R++ G V
Sbjct: 86 GGEFQSGHTADVLSISINGSNSKMFVSGSCDATAR--LWDTRVASRAVRTFHGHE-GDVN 142
Query: 134 DIAVTPDGEYLISIFLDKEIRILHLRTNAE 163
+ PDG + D R+ +RT +
Sbjct: 143 SVKFFPDGNRFGTGSEDGTCRLFDIRTGHQ 172
>Medtr2g012630.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190941-3179834 | 20130731
Length = 1111
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 26 KVQEDGKLTLKHTLFGHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVETGTCKHTFGNQG 85
K+ ++ K HT GH +S + ++PD +++ G V+K+WD+ G H F
Sbjct: 125 KIWDNRKKGCIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFNFHD 184
Query: 86 FVVSSCAWFPNSKQFVCGSFDPEKGICMWDCEGNEMRSWRGMRMPKVVDIAVTPDGEYLI 145
++S + P +F+ + ++ + WD E E+ V +A PDG L
Sbjct: 185 GHITSLDFHP--LEFLLATGSADRTVKFWDLESFELIGSARREATGVRSMAFHPDGRTLF 242
Query: 146 S 146
S
Sbjct: 243 S 243
>Medtr3g116500.2 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr3:54501019-54496204 |
20130731
Length = 378
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Query: 23 LVSKVQEDGKLTLKHTLFGHQSAVSFVAWSP-DDTKLLTCGNKEVLKLWDVETGTCKHTF 81
L S DG L + L GH+ VS + P +DT L+T + LWD+ TG F
Sbjct: 136 LNSPTDRDGNLNVSRMLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRTSVF 195
Query: 82 GNQ------GFVVSSCAWFPNSKQFVCGSFDPEKGICMWDCE--GNEMRSWRGMRMPKVV 133
G + V+S NSK FV GS D +WD +R++ G V
Sbjct: 196 GGEFQSGHTADVLSISINGSNSKMFVSGSCDATAR--LWDTRVASRAVRTFHGHE-GDVN 252
Query: 134 DIAVTPDGEYLISIFLDKEIRILHLRTNAE 163
+ PDG + D R+ +RT +
Sbjct: 253 SVKFFPDGNRFGTGSEDGTCRLFDIRTGHQ 282
>Medtr3g116500.1 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr3:54501139-54496286 |
20130731
Length = 378
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Query: 23 LVSKVQEDGKLTLKHTLFGHQSAVSFVAWSP-DDTKLLTCGNKEVLKLWDVETGTCKHTF 81
L S DG L + L GH+ VS + P +DT L+T + LWD+ TG F
Sbjct: 136 LNSPTDRDGNLNVSRMLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRTSVF 195
Query: 82 GNQ------GFVVSSCAWFPNSKQFVCGSFDPEKGICMWDCE--GNEMRSWRGMRMPKVV 133
G + V+S NSK FV GS D +WD +R++ G V
Sbjct: 196 GGEFQSGHTADVLSISINGSNSKMFVSGSCDATAR--LWDTRVASRAVRTFHGHE-GDVN 252
Query: 134 DIAVTPDGEYLISIFLDKEIRILHLRTNAE 163
+ PDG + D R+ +RT +
Sbjct: 253 SVKFFPDGNRFGTGSEDGTCRLFDIRTGHQ 282
>Medtr3g116500.3 | guanine nucleotide-binding protein beta
subunit-like protein | HC | chr3:54501139-54496286 |
20130731
Length = 378
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 62/150 (41%), Gaps = 12/150 (8%)
Query: 23 LVSKVQEDGKLTLKHTLFGHQSAVSFVAWSP-DDTKLLTCGNKEVLKLWDVETGTCKHTF 81
L S DG L + L GH+ VS + P +DT L+T + LWD+ TG F
Sbjct: 136 LNSPTDRDGNLNVSRMLSGHKGYVSSCQYVPGEDTHLITGSGDQTCVLWDITTGLRTSVF 195
Query: 82 GNQ------GFVVSSCAWFPNSKQFVCGSFDPEKGICMWDCE--GNEMRSWRGMRMPKVV 133
G + V+S NSK FV GS D +WD +R++ G V
Sbjct: 196 GGEFQSGHTADVLSISINGSNSKMFVSGSCDATAR--LWDTRVASRAVRTFHGHE-GDVN 252
Query: 134 DIAVTPDGEYLISIFLDKEIRILHLRTNAE 163
+ PDG + D R+ +RT +
Sbjct: 253 SVKFFPDGNRFGTGSEDGTCRLFDIRTGHQ 282
>Medtr2g012630.2 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr2:3190921-3179833 | 20130731
Length = 1030
Score = 51.2 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 2/121 (1%)
Query: 26 KVQEDGKLTLKHTLFGHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVETGTCKHTFGNQG 85
K+ ++ K HT GH +S + ++PD +++ G V+K+WD+ G H F
Sbjct: 125 KIWDNRKKGCIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFNFHD 184
Query: 86 FVVSSCAWFPNSKQFVCGSFDPEKGICMWDCEGNEMRSWRGMRMPKVVDIAVTPDGEYLI 145
++S + P +F+ + ++ + WD E E+ V +A PDG L
Sbjct: 185 GHITSLDFHP--LEFLLATGSADRTVKFWDLESFELIGSARREATGVRSMAFHPDGRTLF 242
Query: 146 S 146
S
Sbjct: 243 S 243
>Medtr4g119620.1 | transducin/WD40 repeat protein | HC |
chr4:49575751-49578750 | 20130731
Length = 326
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 41 GHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPNSKQF 100
GHQ VS +A+S D L++ + + ++LWDV TG+ T V + P S
Sbjct: 76 GHQHGVSDLAFSSDSRYLVSASDDKTIRLWDVPTGSLVKTLHGHTNYVFCVNFNPQSNVI 135
Query: 101 VCGSFDPEKGICMWDCEGNEMRSWRGMRMPKVVDIAVTPDGEYLISIFLDKEIRI 155
V GSFD + + +WD + + V + DG ++S D RI
Sbjct: 136 VSGSFD--ETVRVWDVKSGKCLKVLPAHSDPVTAVDFNRDGTLIVSSSYDGLCRI 188
>Medtr6g004040.1 | katanin p80 WD40 repeat subunit B1-like protein |
HC | chr6:91770-77124 | 20130731
Length = 760
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 37 HTLFGHQSAVSFVAWSPDDTKLLTCGNKEVLKLWDVETGTCKHTFGNQGFVVSSCAWFPN 96
HT GH V+ + ++PD +++ G +KLWD+ G H F + + + P+
Sbjct: 137 HTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHDFKSHEGQIQCIDFHPS 196
Query: 97 SKQFVCGSFDPEKGICMWDCEGNEMRSWRGMRMPKVVDIAVTPDGEYLI 145
+F+ + ++ + WD E E+ G V + +PDG L+
Sbjct: 197 --EFLLATGSADRTVKFWDLETFELIGSAGPETTGVRSLTFSPDGRTLL 243