Miyakogusa Predicted Gene

Lj0g3v0257209.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0257209.1 tr|E5GCD1|E5GCD1_CUCME Ubiquitin-protein ligase
OS=Cucumis melo subsp. melo PE=4 SV=1,25.61,0.0000000000002,no
description,NULL; F-box domain,F-box domain, cyclin-like; seg,NULL;
FBOX,F-box domain, cyclin-lik,CUFF.16903.1
         (323 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g069850.1 | hypothetical protein | LC | chr7:25756191-2575...    58   2e-08
Medtr7g069800.1 | F-box protein | LC | chr7:25733806-25732646 | ...    56   5e-08
Medtr7g069820.1 | F-box protein | LC | chr7:25741507-25740350 | ...    53   4e-07

>Medtr7g069850.1 | hypothetical protein | LC |
           chr7:25756191-25755091 | 20130731
          Length = 366

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 141/343 (41%), Gaps = 83/343 (24%)

Query: 28  KDYLKCRQVCRSWRSKVNDATKTRCXXXXXXXXXXXXXIAHSLIRNEDPATLLDNITAQN 87
           KDYL+ R +CRS R  V++  + +                H     E P+          
Sbjct: 9   KDYLRLRAICRSCRETVSNIIENK----------------HCCPLPEMPS---------- 42

Query: 88  INRRQRTFIPTHLWEGFSALVRSQEGWLMFQDLIIRCNSGHSLFWIFNPVSREKYKLPRI 147
           ++ +    + T L +  +  + S EGWL+  D     + G + F+  NPV+  +  +P  
Sbjct: 43  LSTKSLLCLRTPLLKS-NKCIGSVEGWLIVVD---NSDKGFAKFFFLNPVTDVRITIPS- 97

Query: 148 RLASPHL--------KVSFSYAP--DSQDLFVVIGSLGKPKSTPHLCFCRVSDKSWTRIE 197
           +L  P +        K++ S  P  D  D ++V    G      H+   ++ +KSWT +E
Sbjct: 98  KLHLPSIIGQRIYVRKMTASSKPNCDGSDCYLV----GLLSDYCHIAIYKLFEKSWTIVE 153

Query: 198 ------TPFKDIMLLGWKLYVV--NDDSVTIFNLRDSKS----IRLVLQLPKLRYDGKRS 245
                 T F DI ++G KLYV+  + +S+ +++L+DS +     +++ + P++   G  S
Sbjct: 154 PDKDSGTYFTDIEIIGRKLYVIGSSSNSILVYDLKDSTNGPPKAQVLAEFPRMP-AGSSS 212

Query: 246 ETCRLVRDSTCEQVLLI--LYTSEYKDIR----------------------IFKFDMS-S 280
               L +D T  ++  I   Y  E +  R                      +FK D + S
Sbjct: 213 YCIFLAKDKTLRELYFISMFYNCEIETQRVVSDRFSIILAYAKPPHVTCFEVFKLDTNKS 272

Query: 281 PNWTELESLSGRALFVDRTGAHVISAANFNTPLEFAGDNCVFF 323
           P   +   L  + +F+    + VIS    N   E    N ++F
Sbjct: 273 PIGWQNVRLDDKVVFLSCCKSMVISRDELNNIEELVRGNSIYF 315


>Medtr7g069800.1 | F-box protein | LC | chr7:25733806-25732646 |
           20130731
          Length = 386

 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 78/346 (22%), Positives = 133/346 (38%), Gaps = 88/346 (25%)

Query: 28  KDYLKCRQVCRSWRSKVNDATKTRCXXXXXXXXXXXXXIAHSLIRNED--PATLLDNITA 85
           KDYL+ R +CRS R                        I  ++I N+   P   L +++ 
Sbjct: 27  KDYLRLRAICRSCRK-----------------------IVSNIIENKHCCPLPELPSLST 63

Query: 86  QNINRRQRTFIPTHLWEGFSALVRSQEGWLMFQDLIIRCNSGHSLFWIFNPVSREKYKLP 145
           ++++R +   +  +   G      S +GWL+  D       G +  +  NPVS  +  +P
Sbjct: 64  KSLHRVRTPLLRDNTCIG------SVDGWLIVSDY---SEKGFAKVFFLNPVSDVRITIP 114

Query: 146 RIRLASPHLKVSFSYAP----------DSQDLFVVIGSLGKPKSTPHLCFCRVSDKSWTR 195
                S  +    SY            D  D ++     G      H+   ++ +KSWT 
Sbjct: 115 SKLYLSSIIGQRISYVSKMTASSKPNCDGSDCYLA----GLLSDYCHIAIYKLFEKSWTI 170

Query: 196 IE------TPFKDIMLLGWKLYVVN--DDSVTIFNLRDS----KSIRLVLQLPKLRYDGK 243
           +E      T F DI ++G KLYV+    DS+ +++L+DS    +   ++ +LP+    G 
Sbjct: 171 VEPDKDSGTYFTDIEIIGTKLYVIGSLSDSILVYDLKDSTNAPRKPEVLAELPR-ALAGS 229

Query: 244 RSETCRLVRDSTCEQVLLI--LYTSE----------------------YKDIRIFKFDMS 279
              +  L +D T  ++ LI   Y  E                           +FK D +
Sbjct: 230 SIYSSFLAKDKTLRELYLIYVFYNGEIDTEQHISDRFNVVSSFVKPPKLTSFEVFKLDTN 289

Query: 280 -SP-NWTELESLSGRALFVDRTGAHVISAANFNTPLEFAGDNCVFF 323
            SP  W  ++ L  +  FV    + V+S    N   E    N ++F
Sbjct: 290 KSPIGWQNVK-LEDKVAFVSNCKSMVMSRDELNYSEELVRGNSIYF 334


>Medtr7g069820.1 | F-box protein | LC | chr7:25741507-25740350 |
           20130731
          Length = 385

 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 77/347 (22%), Positives = 137/347 (39%), Gaps = 90/347 (25%)

Query: 28  KDYLKCRQVCRSWRSKVNDATKTRCXXXXXXXXXXXXXIAHSLIRNED--PATLLDNITA 85
           KDYL+ R +CRS R                        I  ++I N+   P   L +++ 
Sbjct: 27  KDYLRLRAICRSCRK-----------------------IVSNIIENKHCCPLPELPSLST 63

Query: 86  QNINRRQRTFIPTHLWEGFSALVRSQEGWLMFQDLIIRCNSGHSLFWIFNPVSREKYKLP 145
           ++++R +   +  +   G      S +GWL+  D       G +  +  NPV+  +  +P
Sbjct: 64  KSLHRVRTPLLRDNTCIG------SVDGWLIVSD---NSEKGFAKIFFLNPVTDVRITIP 114

Query: 146 RIRLASPHL---------KVSFSYAP--DSQDLFVVIGSLGKPKSTPHLCFCRVSDKSWT 194
             +L  P +         K++ S  P  D  D ++     G      H+   ++ +KSWT
Sbjct: 115 S-KLHLPSIVGQSISYVTKLTASSKPNCDGSDCYLA----GLFSDYCHIAIYKLFEKSWT 169

Query: 195 RIE------TPFKDIMLLGWKLYVVN--DDSVTIFNLRDS----KSIRLVLQLPKLRYDG 242
            +E      T F DI ++G KLYV+    DS+ +++L+DS    +   ++ +LP+    G
Sbjct: 170 IVESDKDSGTYFTDIEIIGTKLYVIGSLSDSILVYDLKDSTNAPRKAEVLAELPRAP-AG 228

Query: 243 KRSETCRLVRDSTCEQVLLI--LYTSE----------------------YKDIRIFKFDM 278
               +  L +D    ++ LI   Y  E                           +FK D 
Sbjct: 229 SSIHSSFLAKDKMLRELYLISVFYNGEIDTEQHISDRFNVVSSFVKPPKLTSFEVFKLDT 288

Query: 279 S-SP-NWTELESLSGRALFVDRTGAHVISAANFNTPLEFAGDNCVFF 323
           + SP  W  ++ L  +  FV    + V++    N   E    N ++F
Sbjct: 289 NKSPIGWQNVK-LEDKVAFVSNWKSMVLARDELNYSEELVRGNSIYF 334