Miyakogusa Predicted Gene

Lj0g3v0257189.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0257189.1 Non Characterized Hit- tr|Q9ARL7|Q9ARL7_HORVD
Putative serine/threonine kinase OS=Hordeum vulgare va,75.41,3e-19,
,CUFF.16901.1
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g045190.1 | Serine/Threonine kinase family protein | HC | ...   112   1e-25

>Medtr5g045190.1 | Serine/Threonine kinase family protein | HC |
           chr5:19824068-19812216 | 20130731
          Length = 825

 Score =  112 bits (279), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 54/57 (94%), Positives = 54/57 (94%)

Query: 22  LPPSIYQRLTSSSTLMNLAQELAYHKMCYEDMPLQELQATQEQRTIQNLLDTLRTIL 78
           LPPSI QRLTSSSTLMNLAQ LAYHKMCYEDMPLQELQATQEQRTIQNL DTLRTIL
Sbjct: 767 LPPSICQRLTSSSTLMNLAQALAYHKMCYEDMPLQELQATQEQRTIQNLSDTLRTIL 823