Miyakogusa Predicted Gene
- Lj0g3v0255699.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0255699.1 tr|G7KTL0|G7KTL0_MEDTR DNA-binding protein
SMUBP-2 OS=Medicago truncatula GN=MTR_7g092200 PE=4
SV=1,92.05,0,AAA_12,NULL; SUBFAMILY NOT NAMED,NULL; DNA2/NAM7 HELICASE
FAMILY,NULL; no description,NULL; P-loop c,CUFF.16787.1
(176 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC | chr7:365184... 341 2e-94
Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC | chr1:147422... 133 9e-32
Medtr5g013820.2 | regulator of nonsense transcripts protein | HC... 103 7e-23
Medtr5g013820.1 | regulator of nonsense transcripts protein | HC... 103 7e-23
Medtr5g006890.1 | RNA helicase SDE3-like protein | HC | chr5:112... 91 4e-19
Medtr5g006890.2 | RNA helicase SDE3-like protein | HC | chr5:112... 91 4e-19
Medtr2g049990.1 | RNA helicase SDE3-like protein | HC | chr2:229... 88 4e-18
Medtr5g006890.4 | RNA helicase SDE3-like protein | HC | chr5:112... 87 6e-18
Medtr5g006890.3 | RNA helicase SDE3-like protein | HC | chr5:112... 87 6e-18
Medtr2g049990.2 | RNA helicase SDE3-like protein | HC | chr2:229... 85 4e-17
Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase super... 82 2e-16
Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase super... 79 2e-15
Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase super... 78 5e-15
Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase super... 78 5e-15
Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase super... 78 6e-15
Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase super... 76 1e-14
Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase super... 76 2e-14
Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-l... 76 2e-14
Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase super... 76 2e-14
Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-l... 75 2e-14
Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-l... 75 3e-14
Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase super... 75 5e-14
Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase supe... 74 8e-14
Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase super... 72 2e-13
Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase super... 70 7e-13
Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase super... 70 7e-13
Medtr7g034575.1 | DNA replication ATP-dependent helicase Dna2 | ... 60 7e-10
Medtr1g038815.1 | P-loop nucleoside triphosphate hydrolase super... 57 1e-08
Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase super... 57 1e-08
Medtr5g080800.1 | AAA domain protein | LC | chr5:34606228-346008... 48 5e-06
>Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC |
chr7:36518499-36511162 | 20130731
Length = 645
Score = 341 bits (875), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 162/176 (92%), Positives = 171/176 (97%)
Query: 1 MLYDLEDVKRTSSTEPTLLLIDIAGCDMEEKKDEEESTLNEGEAEVAMAYAKRLVQSGVL 60
MLYDLE VK+TSSTEPTLLLID AGCDMEEKKDEE+STLNEGE+EVAMA+AKRLVQSGVL
Sbjct: 470 MLYDLEGVKKTSSTEPTLLLIDTAGCDMEEKKDEEDSTLNEGESEVAMAHAKRLVQSGVL 529
Query: 61 PSDIGIITPYAAQVVLLRMLRNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKNEVG 120
PSDIGIITPYAAQVVLL+ML+NKE+ LKD+EISTVDGFQGREKEAIIISMVRSNSK EVG
Sbjct: 530 PSDIGIITPYAAQVVLLKMLKNKENSLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVG 589
Query: 121 FLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYQSASEYQNE 176
FLSDRRRMNVAVTRARRQCC+VCDTETVSSDGFLKRLIEYFEEH EYQSASEYQNE
Sbjct: 590 FLSDRRRMNVAVTRARRQCCIVCDTETVSSDGFLKRLIEYFEEHGEYQSASEYQNE 645
>Medtr1g040155.1 | DNA-binding protein SMUBP-2 | HC |
chr1:14742280-14736383 | 20130731
Length = 914
Score = 133 bits (334), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 101/169 (59%), Gaps = 8/169 (4%)
Query: 1 MLYDLEDVKRTSSTEPTLLLIDI--------AGCDMEEKKDEEESTLNEGEAEVAMAYAK 52
+L D VK T T+ LLL+D GC+ + S NEGEA++ + +
Sbjct: 716 LLVDSPFVKPTWITQCPLLLLDTRMPYGSLSIGCEEHLDQAGTGSLYNEGEADIVLQHVF 775
Query: 53 RLVQSGVLPSDIGIITPYAAQVVLLRMLRNKEDRLKDVEISTVDGFQGREKEAIIISMVR 112
L+ +GV P+ I + +PY AQV LLR + + E+ST+D FQGRE +A+I+SMVR
Sbjct: 776 SLIYAGVSPNAIVVQSPYVAQVQLLRDMLDGVPEAAGTEVSTIDSFQGREADAVILSMVR 835
Query: 113 SNSKNEVGFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYF 161
SN+ VGFL D RR+NVA+TRAR+ +VCD+ T+ + FL RL+ +
Sbjct: 836 SNTLGAVGFLGDSRRINVAITRARKHLAIVCDSSTICHNTFLARLMRHI 884
>Medtr5g013820.2 | regulator of nonsense transcripts protein | HC |
chr5:4548258-4534982 | 20130731
Length = 1275
Score = 103 bits (258), Expect = 7e-23, Method: Composition-based stats.
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Query: 29 EEKKDEEESTLNEGEAEVAMAYAKRLVQSGVLPSDIGIITPYAAQ--VVLLRMLRN---K 83
EE S LN EA ++SGV+PS IG+ITPY Q ++ M RN +
Sbjct: 763 EEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALR 822
Query: 84 EDRLKDVEISTVDGFQGREKEAIIISMVRSNSKNEVGFLSDRRRMNVAVTRARRQCCLVC 143
+ K++E+++VD FQGREK+ II+S VRSN +GFL+D RR+NVA+TRAR ++
Sbjct: 823 QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILG 882
Query: 144 DTETVSSDGFLKRLIEYFEEH 164
+ + +S L+ +++EH
Sbjct: 883 NPKVLSKQPLWNGLLTHYKEH 903
>Medtr5g013820.1 | regulator of nonsense transcripts protein | HC |
chr5:4548278-4534982 | 20130731
Length = 1253
Score = 103 bits (258), Expect = 7e-23, Method: Composition-based stats.
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 5/141 (3%)
Query: 29 EEKKDEEESTLNEGEAEVAMAYAKRLVQSGVLPSDIGIITPYAAQ--VVLLRMLRN---K 83
EE S LN EA ++SGV+PS IG+ITPY Q ++ M RN +
Sbjct: 763 EEISASGTSYLNRTEAANVEKIVTTFLKSGVVPSQIGVITPYEGQRAYIVNYMSRNGALR 822
Query: 84 EDRLKDVEISTVDGFQGREKEAIIISMVRSNSKNEVGFLSDRRRMNVAVTRARRQCCLVC 143
+ K++E+++VD FQGREK+ II+S VRSN +GFL+D RR+NVA+TRAR ++
Sbjct: 823 QQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILG 882
Query: 144 DTETVSSDGFLKRLIEYFEEH 164
+ + +S L+ +++EH
Sbjct: 883 NPKVLSKQPLWNGLLTHYKEH 903
>Medtr5g006890.1 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 18 LLLIDIAGCDMEEKKDEEESTLNEGEAEVAMAYAKRLVQSG-VLPSDIGIITPYAAQVVL 76
+L I GCD E++ S N E + +L+ G + DIGIITPY QV+
Sbjct: 662 VLFFGIQGCD--EREGNNPSWFNRIEVSKVVETVGKLINGGKIREEDIGIITPYRQQVLK 719
Query: 77 LRM-LRNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKNE-------VGFLSDRRRM 128
++ L N E + DV++ +V+ FQG+EKE II+S VRS K+ +GFLS+ RR
Sbjct: 720 IKQTLENLE--MPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRF 777
Query: 129 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYQSAS 171
NVA+TRA ++ + + D +++ + +H+ Y S
Sbjct: 778 NVAITRAISLLVIIGNPHIICKDDHWSQMLWHCVDHSSYLGCS 820
>Medtr5g006890.2 | RNA helicase SDE3-like protein | HC |
chr5:1125101-1129505 | 20130731
Length = 940
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 18 LLLIDIAGCDMEEKKDEEESTLNEGEAEVAMAYAKRLVQSG-VLPSDIGIITPYAAQVVL 76
+L I GCD E++ S N E + +L+ G + DIGIITPY QV+
Sbjct: 662 VLFFGIQGCD--EREGNNPSWFNRIEVSKVVETVGKLINGGKIREEDIGIITPYRQQVLK 719
Query: 77 LRM-LRNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKNE-------VGFLSDRRRM 128
++ L N E + DV++ +V+ FQG+EKE II+S VRS K+ +GFLS+ RR
Sbjct: 720 IKQTLENLE--MPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRF 777
Query: 129 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYQSAS 171
NVA+TRA ++ + + D +++ + +H+ Y S
Sbjct: 778 NVAITRAISLLVIIGNPHIICKDDHWSQMLWHCVDHSSYLGCS 820
>Medtr2g049990.1 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 940
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 18 LLLIDIAGCDMEEKKDEEESTLNEGEAEVAMAYAKRLVQSG-VLPSDIGIITPYAAQVVL 76
+L I GCD E++ S N E + +L+ G + DIGIITPY QV+
Sbjct: 662 VLFFGIQGCD--EREGNNPSWFNRIEVSKVVETVGKLINGGKIREEDIGIITPYRQQVLK 719
Query: 77 LRM-LRNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKNE-------VGFLSDRRRM 128
++ L N E + DV++ +V+ FQG+EKE II+S VRS K+ +GFLS+ RR
Sbjct: 720 IKQTLENLE--MPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNHRRF 777
Query: 129 NVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYQSAS 171
NVA+TRA ++ + + D +++ + +++ Y S
Sbjct: 778 NVAITRAISLLVIIGNPHIICKDDHWSQMLWHCVDNSSYLGCS 820
>Medtr5g006890.4 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 87.4 bits (215), Expect = 6e-18, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 15 EPTLLLIDIAGCDMEEKKDEEESTLNEGEAEVAMAYAKRLVQSG-VLPSDIGIITPYAAQ 73
E +L I GCD E++ S N E + +L+ G + DIGIITPY Q
Sbjct: 400 EFPVLFFGIQGCD--EREGNNPSWFNRIEVSKVVETVGKLINGGKIREEDIGIITPYRQQ 457
Query: 74 VVLLRM-LRNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSK-NE------VGFLSDR 125
V+ ++ L N E + DV++ +V+ FQG+EKE II+S VRS K NE +GFLS+
Sbjct: 458 VLKIKQTLENLE--MPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNH 515
Query: 126 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYQSAS 171
RR NVA+TRA ++ + + D +++ + +H+ Y S
Sbjct: 516 RRFNVAITRAISLLVIIGNPHIICKDDHWSQMLWHCVDHSSYLGCS 561
>Medtr5g006890.3 | RNA helicase SDE3-like protein | HC |
chr5:1125978-1129505 | 20130731
Length = 681
Score = 87.4 bits (215), Expect = 6e-18, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 15 EPTLLLIDIAGCDMEEKKDEEESTLNEGEAEVAMAYAKRLVQSG-VLPSDIGIITPYAAQ 73
E +L I GCD E++ S N E + +L+ G + DIGIITPY Q
Sbjct: 400 EFPVLFFGIQGCD--EREGNNPSWFNRIEVSKVVETVGKLINGGKIREEDIGIITPYRQQ 457
Query: 74 VVLLRM-LRNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSK-NE------VGFLSDR 125
V+ ++ L N E + DV++ +V+ FQG+EKE II+S VRS K NE +GFLS+
Sbjct: 458 VLKIKQTLENLE--MPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNH 515
Query: 126 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYQSAS 171
RR NVA+TRA ++ + + D +++ + +H+ Y S
Sbjct: 516 RRFNVAITRAISLLVIIGNPHIICKDDHWSQMLWHCVDHSSYLGCS 561
>Medtr2g049990.2 | RNA helicase SDE3-like protein | HC |
chr2:22979235-22972717 | 20130731
Length = 681
Score = 84.7 bits (208), Expect = 4e-17, Method: Composition-based stats.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 13/166 (7%)
Query: 15 EPTLLLIDIAGCDMEEKKDEEESTLNEGEAEVAMAYAKRLVQSG-VLPSDIGIITPYAAQ 73
E +L I GCD E++ S N E + +L+ G + DIGIITPY Q
Sbjct: 400 EFPVLFFGIQGCD--EREGNNPSWFNRIEVSKVVETVGKLINGGKIREEDIGIITPYRQQ 457
Query: 74 VVLLRM-LRNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSK-NE------VGFLSDR 125
V+ ++ L N E + DV++ +V+ FQG+EKE II+S VRS K NE +GFLS+
Sbjct: 458 VLKIKQTLENLE--MPDVKVGSVEQFQGQEKEVIIVSTVRSTIKHNEFDRIHCLGFLSNH 515
Query: 126 RRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYQSAS 171
RR NVA+TRA ++ + + D +++ + +++ Y S
Sbjct: 516 RRFNVAITRAISLLVIIGNPHIICKDDHWSQMLWHCVDNSSYLGCS 561
>Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28858780-28854927 |
20130731
Length = 906
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 64 IGIITPYAAQVVLLRMLRNKEDRLKD----VEISTVDGFQGREKEAIIISMVRSNSKNEV 119
IGII+PY AQV ++ + + D V + +VDGFQG E++ IIIS VRSN ++
Sbjct: 723 IGIISPYNAQVYEIQEKIKPNNSISDPNFSVSVRSVDGFQGGEEDIIIISTVRSNEDAKI 782
Query: 120 GFLSDRRRMNVAVTRARRQCCLVCDTETV--SSDGFLKRLIEYFEEHAEYQSASE 172
GFLS+R+R NVA+TRA R C + ET SD K L+ +E + +A E
Sbjct: 783 GFLSNRQRANVALTRA-RHCLWILGNETTLEKSDSIWKELVLDAKERGCFHNADE 836
>Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32616775-32612603 |
20130731
Length = 917
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 5/100 (5%)
Query: 64 IGIITPYAAQVVLLRMLRNKEDRLKDVEIS----TVDGFQGREKEAIIISMVRSNSKNEV 119
IGII+PY AQV ++ + + D + S ++DGFQG E++ IIIS VRSN V
Sbjct: 733 IGIISPYNAQVYEIQEKVKQYTSVSDTDFSVSVRSIDGFQGGEEDIIIISTVRSNGSGNV 792
Query: 120 GFLSDRRRMNVAVTRARRQCCLVCDTETVS-SDGFLKRLI 158
GFLS+R+R NVA+TRAR ++ + T++ SD ++LI
Sbjct: 793 GFLSNRQRANVAMTRARYCLWILGNASTLANSDSIWRKLI 832
>Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28870689-28861592 |
20130731
Length = 1113
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 20 LIDIAGCDMEEKKDEEESTLNEGEAEVAMAYAKRLVQSGV---LPSDIGIITPYAAQVVL 76
ID+A E++ DE S N E V L + V +G+I+PY AQVV
Sbjct: 756 FIDVAF--GEDELDEGSSRRNMVEVAVVSGIVLNLYKESVSRKQTVSVGVISPYKAQVVA 813
Query: 77 LRMLRNKE-----DRLKDVEISTVDGFQGREKEAIIISMVRSNSKNEVGFLSDRRRMNVA 131
++ +K + V++STVDGFQG E++ IIIS VR NS VGF+S+ +R NV+
Sbjct: 814 IQDTLDKRFGGDVNDGFSVKVSTVDGFQGGEEDVIIISTVRHNSMGVVGFISNIQRTNVS 873
Query: 132 VTRARRQCCLVCDTETVSSDGFLKRLIEY 160
+TRAR ++ + ET+ + G + ++ Y
Sbjct: 874 LTRARYCLWIIGNGETLMNSGSIWEVLLY 902
>Medtr2g105760.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr2:45654495-45634088 |
20130731
Length = 2328
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 15/152 (9%)
Query: 23 IAGCDMEEKKDEEESTLNEGEAEVA---MAYAKRLVQSGVLPSDIGIITPYAAQVVLLR- 78
I G + K S NE EA+ A + + K+ + + IGIITPY Q+ LLR
Sbjct: 1910 IDGREAHGKNSGAMSLCNEHEADAAIEILRFFKKRYPAEFIGGRIGIITPYKCQLSLLRS 1969
Query: 79 --MLRNKEDRLKDVEISTVDGFQGREKEAIIISMVRSN---------SKNEVGFLSDRRR 127
+ + D+E +TVDGFQGRE + +++S VR+ + + +GF++D RR
Sbjct: 1970 RFLNAFGSSTIADIEFNTVDGFQGREVDILLLSTVRAGHSGTAASEINSSSIGFVADIRR 2029
Query: 128 MNVAVTRARRQCCLVCDTETVSSDGFLKRLIE 159
MNVA+TRA+ ++ + T+ ++ L++
Sbjct: 2030 MNVALTRAKLSLWILGNARTLQTNHNWAALVK 2061
>Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32566132-32571914 |
20130731
Length = 885
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Query: 64 IGIITPYAAQVVLLRMLRNKEDRLKDVEIS----TVDGFQGREKEAIIISMVRSNSKNEV 119
IGII+PY AQV ++ + + D + S +VDGFQG E++ IIIS VRSN +V
Sbjct: 722 IGIISPYNAQVFEIQEKVKQYIAVSDTDFSVSVRSVDGFQGGEEDIIIISTVRSNESGKV 781
Query: 120 GFLSDRRRMNVAVTRARRQCCLVCDTET-VSSDGFLKRLI 158
GFLS+R+R+NVA+TRAR ++ + T ++SD + ++
Sbjct: 782 GFLSNRQRVNVAITRARYCLWILGNAATLINSDSVWRNVV 821
>Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32541203-32546485 |
20130731
Length = 898
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%), Gaps = 6/100 (6%)
Query: 64 IGIITPYAAQVVLLRMLRNKEDRLKD----VEISTVDGFQGREKEAIIISMVRSNSKNEV 119
IGII+PY AQV ++ + K+ + D V + +VDGFQG E++ IIIS VRSN +V
Sbjct: 719 IGIISPYKAQVHEIQE-KVKQYMVSDPNFSVSVRSVDGFQGGEEDIIIISTVRSNLSGKV 777
Query: 120 GFLSDRRRMNVAVTRARRQCCLVCDTET-VSSDGFLKRLI 158
GFLS+R+R NVA+TRAR +V + T V+S+ ++++
Sbjct: 778 GFLSNRQRANVAITRARYCLWIVGNATTLVNSNSVWRKVV 817
>Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32517067-32511573 |
20130731
Length = 897
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 65/105 (61%), Gaps = 16/105 (15%)
Query: 64 IGIITPYAAQVVLLRMLRNKEDRLK---------DVEISTVDGFQGREKEAIIISMVRSN 114
IGII+PY AQV ++R+K + + +VDGFQG E++ IIIS VRSN
Sbjct: 744 IGIISPYKAQV------HEIQERVKQYMVSAPNFSINVRSVDGFQGGEEDLIIISTVRSN 797
Query: 115 SKNEVGFLSDRRRMNVAVTRARRQCCLVCDTET-VSSDGFLKRLI 158
+VGFLS+R+R NVA+TRAR +V + T ++S+ ++++
Sbjct: 798 FGGKVGFLSNRQRTNVAITRARYCLWIVGNATTLINSNSVWRKVV 842
>Medtr8g020390.1 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139957-7131293 | 20130731
Length = 1373
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 70/105 (66%), Gaps = 9/105 (8%)
Query: 50 YAKRLVQSGVLPS-DIGIITPYAAQVVLLR-----MLRNKEDRLKDVEISTVDGFQGREK 103
+ ++ V+S LP +GIITPY Q+ L+ +L ++E KD+ I+TVD FQG+E+
Sbjct: 1143 HIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLNSEEG--KDIYINTVDAFQGQER 1200
Query: 104 EAIIISMVRSNSKNEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 148
+ II+S VR+ S + VGF++D RRMNVA+TRARR ++ + +
Sbjct: 1201 DVIIMSCVRA-STHGVGFVADIRRMNVALTRARRALWVMGNANAL 1244
>Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32527815-32524102 |
20130731
Length = 860
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 64/100 (64%), Gaps = 5/100 (5%)
Query: 64 IGIITPYAAQV--VLLRMLRNKEDRLKD--VEISTVDGFQGREKEAIIISMVRSNSKNEV 119
IGII+PY AQV + ++ + D D V + +VDGFQG E++ IIIS VRSN V
Sbjct: 700 IGIISPYNAQVNEIQEKVKQYTWDTTSDFSVNVRSVDGFQGGEEDIIIISTVRSNGSGNV 759
Query: 120 GFLSDRRRMNVAVTRARRQCCLVCDTET-VSSDGFLKRLI 158
GFLS+R+R NVA+TRAR ++ + T ++SD + ++
Sbjct: 760 GFLSNRQRANVAMTRARYCLWILGNAATLINSDSVWRNVV 799
>Medtr8g020390.3 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 868
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 70/105 (66%), Gaps = 9/105 (8%)
Query: 50 YAKRLVQSGVLPS-DIGIITPYAAQVVLLR-----MLRNKEDRLKDVEISTVDGFQGREK 103
+ ++ V+S LP +GIITPY Q+ L+ +L ++E KD+ I+TVD FQG+E+
Sbjct: 638 HIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLNSEEG--KDIYINTVDAFQGQER 695
Query: 104 EAIIISMVRSNSKNEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 148
+ II+S VR+ S + VGF++D RRMNVA+TRARR ++ + +
Sbjct: 696 DVIIMSCVRA-STHGVGFVADIRRMNVALTRARRALWVMGNANAL 739
>Medtr8g020390.2 | tRNA-splicing endonuclease positive effector-like
protein | HC | chr8:7139954-7131293 | 20130731
Length = 1156
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 70/105 (66%), Gaps = 9/105 (8%)
Query: 50 YAKRLVQSGVLPS-DIGIITPYAAQVVLLR-----MLRNKEDRLKDVEISTVDGFQGREK 103
+ ++ V+S LP +GIITPY Q+ L+ +L ++E KD+ I+TVD FQG+E+
Sbjct: 926 HIQKTVKSLGLPKISVGIITPYKLQLKCLQREFEEVLNSEEG--KDIYINTVDAFQGQER 983
Query: 104 EAIIISMVRSNSKNEVGFLSDRRRMNVAVTRARRQCCLVCDTETV 148
+ II+S VR+ S + VGF++D RRMNVA+TRARR ++ + +
Sbjct: 984 DVIIMSCVRA-STHGVGFVADIRRMNVALTRARRALWVMGNANAL 1027
>Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:12235889-12229184 |
20130731
Length = 1644
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 17 TLLLIDIAGCDMEEKKDEEESTLNEGEAEVAMAYAKRLVQSGVLPSD---IGIITPYAAQ 73
T I++AG EE D+ S N E V M K L + + + IGI++PYA Q
Sbjct: 685 TYSFINVAG-GREEFDDDGRSYKNIAEVAVVMTILKNLHKVWLAKKEKLSIGIVSPYAGQ 743
Query: 74 VVL----LRMLRNKEDRLKDVEISTVDGFQGREKEAIIISMVRSNSKNEVGFLSDRRRMN 129
V+ L M+ +V + ++DGFQG E++ II+S VR+N + + F+S +R N
Sbjct: 744 VLKIQEKLAMMNYSSHDGFNVNVKSIDGFQGGEQDIIILSTVRTNYRTSLQFISSPQRTN 803
Query: 130 VAVTRARRQCCLVCDTE 146
VA+TRA R C + E
Sbjct: 804 VALTRA-RYCLWILGNE 819
>Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | scaffold0189:14094-24465 |
20130731
Length = 2395
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 7/137 (5%)
Query: 20 LIDIAGCDMEEKKDEEESTLNEGEAEVAMAYAKRLVQSGVLPSD---IGIITPYAAQVVL 76
I+I G EE D S N E V M K ++ ++ IG+++PYAAQV
Sbjct: 668 FINIIG-GTEEFDDAGRSQKNIVEMVVVMQIIKNCFRAWRDSNENLSIGVVSPYAAQVFA 726
Query: 77 LR-MLRNKEDRLK--DVEISTVDGFQGREKEAIIISMVRSNSKNEVGFLSDRRRMNVAVT 133
++ ML + D + V++ T+DGFQG E++ II+S VR++ +GF+S+ +R NVA+T
Sbjct: 727 IQDMLGRRYDSHEGFSVKVKTIDGFQGGEQDIIILSTVRTDCSTSLGFISNNQRTNVALT 786
Query: 134 RARRQCCLVCDTETVSS 150
RAR ++ + T+ S
Sbjct: 787 RARHCLWILGNERTLVS 803
>Medtr1g052700.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:21642650-21636231 |
20130731
Length = 336
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 14/154 (9%)
Query: 29 EEKKDEEESTLNEGEAEVAMAYAKRLV------QSGVLPSDIGIITPYAAQVVLLRMLRN 82
E K S +N E + + ++LV +SG + + II+PY+ QV L + R
Sbjct: 158 EAKPSGSGSWVNVEEVDFVLLLYQKLVSLYPTLKSG---NQVAIISPYSGQVNLFKQ-RF 213
Query: 83 KE----DRLKDVEISTVDGFQGREKEAIIISMVRSNSKNEVGFLSDRRRMNVAVTRARRQ 138
+E K V+I TVDG QGREK+ I S VR++ + +GF+ D+RRMNV +TRA+
Sbjct: 214 EETFGVSAEKLVDICTVDGCQGREKDVAIFSCVRASKEGGIGFVDDKRRMNVGITRAKSA 273
Query: 139 CCLVCDTETVSSDGFLKRLIEYFEEHAEYQSASE 172
+V T+ +L+E E+ + AS+
Sbjct: 274 VLVVGSASTLRRSVQWNKLVESAEKRDCFFKASK 307
>Medtr5g053930.2 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Query: 64 IGIITPYAAQVVLLRMLRNKE----DRLKDVEISTVDGFQGREKEAIIISMVRSNSKNEV 119
+ II+PY AQV L + R +E K V+I TVDG QGREK+ I S VR++ + +
Sbjct: 642 VAIISPYKAQVNLFQQ-RFEETFGVSAEKLVDICTVDGCQGREKDVAIFSCVRASKEGGI 700
Query: 120 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYQSASE 172
GFL D RRMNV +TRA+ +V T+ +L+E E+ + AS+
Sbjct: 701 GFLDDIRRMNVGITRAKSAVLVVGSASTLRRSVQWNKLVESAEKRDCFFKASK 753
>Medtr5g053930.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:22211102-22194060 |
20130731
Length = 821
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
Query: 64 IGIITPYAAQVVLLRMLRNKE----DRLKDVEISTVDGFQGREKEAIIISMVRSNSKNEV 119
+ II+PY AQV L + R +E K V+I TVDG QGREK+ I S VR++ + +
Sbjct: 642 VAIISPYKAQVNLFQQ-RFEETFGVSAEKLVDICTVDGCQGREKDVAIFSCVRASKEGGI 700
Query: 120 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKRLIEYFEEHAEYQSASE 172
GFL D RRMNV +TRA+ +V T+ +L+E E+ + AS+
Sbjct: 701 GFLDDIRRMNVGITRAKSAVLVVGSASTLRRSVQWNKLVESAEKRDCFFKASK 753
>Medtr7g034575.1 | DNA replication ATP-dependent helicase Dna2 | HC |
chr7:13072986-13090873 | 20130731
Length = 1335
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
Query: 40 NEGEAEVAMAYAKRLVQSGVLPSDIGIITPYAAQVVLLRMLRNKEDRLKDVEISTVDGFQ 99
N EA + AK LV++G+ +IGIITPY +Q L+R + +EI T+D +Q
Sbjct: 1178 NPIEAHIIAEVAKELVKNGIGGENIGIITPYNSQANLIR----HATCITSLEIHTIDKYQ 1233
Query: 100 GREKEAIIISMVRS--NSKNEVG-FLSDRRRMNVAVTRARRQCCLV 142
GR+K+ I++S VRS N + V L D R+NVA+TRA+R+ +V
Sbjct: 1234 GRDKDCILVSFVRSCENPTSCVASLLGDWHRINVALTRAKRKLIMV 1279
>Medtr1g038815.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr1:14386619-14375144 |
20130731
Length = 1545
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 40 NEGEAEVAMAYAKRLVQSGVLPSDIGIITPYAAQVVLLRMLRNKEDRLKDV-----EIST 94
NEGEAE ++ + G + I I+T Y Q +L+R + N+ + +++T
Sbjct: 1271 NEGEAEYIVSVYIYMRLLGYPANKISILTTYNGQKLLIRDVINRRCVPYNFIGAPSKVAT 1330
Query: 95 VDGFQGREKEAIIISMVRSNSKNEVGFLSDRRRMNVAVTRARRQCCLVC 143
VD FQG++ + I++S+VR+ VG L D RR+ VA++RAR + C
Sbjct: 1331 VDKFQGQQNDFILLSLVRTRF---VGHLRDVRRLVVAMSRARLGLYVFC 1376
>Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32534161-32530565 |
20130731
Length = 884
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 14/97 (14%)
Query: 64 IGIITPYAAQVVLLRMLRNKEDRLKD----VEISTVDGFQGREKEAIIISMVRSNSKNEV 119
IGI++PY AQV ++ + ++ + V + +VDGFQG E++ IIIS VRSN
Sbjct: 747 IGIVSPYNAQVYEIQEEIEQYTKVANSKFSVNVRSVDGFQGGEEDIIIISTVRSNG---- 802
Query: 120 GFLSDRRRMNVAVTRARRQCCLVCDTETVSSDGFLKR 156
RR NVA+TRAR ++ + T+ + G + R
Sbjct: 803 ------RRTNVALTRARYCLWILGNASTLINSGSVWR 833
>Medtr5g080800.1 | AAA domain protein | LC | chr5:34606228-34600879
| 20130731
Length = 1281
Score = 47.8 bits (112), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 79 MLRNKEDRLKD--VEISTVDGFQGREKEAIIISMVRSNSKNEVGFLSDRRRMNVAVTRAR 136
ML K D+ +D V++ T+DGFQG E++ II S VR++ + +R NVA+TRAR
Sbjct: 1 MLGQKYDKHEDFNVKVKTIDGFQGGEQDIIIFSTVRTDCSTSLD-----QRTNVALTRAR 55
Query: 137 RQCCLVCDTET-VSSDGFLKRLI 158
++ + T VS D K L+
Sbjct: 56 HCLWILGNERTLVSQDNVWKALV 78