Miyakogusa Predicted Gene

Lj0g3v0255589.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0255589.1 tr|A5B6F1|A5B6F1_VITVI Adenylate kinase OS=Vitis
vinifera GN=adk PE=3 SV=1,75,0.00002,NUCLEOTIDE KINASE,Adenylate
kinase; Adenylate_kinase_Adk,Adenylate kinase; no description,NULL;
P-lo,CUFF.16782.1
         (243 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g103800.1 | adenylate kinase | HC | chr4:42939312-42944040...   455   e-128
Medtr4g103800.2 | adenylate kinase | HC | chr4:42939312-42944040...   342   3e-94
Medtr4g103800.3 | adenylate kinase | HC | chr4:42939312-42944040...   342   3e-94
Medtr4g035170.1 | adenylate kinase | HC | chr4:12046801-12052564...   148   6e-36
Medtr2g461290.1 | adenylate kinase | HC | chr2:25307375-25315642...   147   9e-36
Medtr1g067050.1 | adenylate kinase | HC | chr1:28853082-28857350...   108   5e-24
Medtr7g100530.1 | P-loop nucleoside triphosphate hydrolase super...   100   1e-21
Medtr8g009520.1 | UMP-CMP kinase family protein | HC | chr8:2227...    82   3e-16
Medtr5g068940.1 | uridylate kinase-like protein | HC | chr5:2918...    75   7e-14
Medtr4g035850.1 | uridylate kinase-like protein | HC | chr4:1266...    73   3e-13
Medtr4g035850.2 | uridylate kinase-like protein | HC | chr4:1266...    72   3e-13

>Medtr4g103800.1 | adenylate kinase | HC | chr4:42939312-42944040 |
           20130731
          Length = 243

 Score =  455 bits (1170), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 218/242 (90%), Positives = 233/242 (96%)

Query: 1   MASPNLEDVASVDLMTELLRRMKCAPKPDKRVILIGPPGSGKGTQSPIIKDEYCLCHLAT 60
           MAS NLEDV SVDLM+ELLRR KC+ KPDKR+IL+GPPGSGKGTQSPIIKDEYCLCHLAT
Sbjct: 1   MASSNLEDVPSVDLMSELLRRFKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLAT 60

Query: 61  GDMLRAAVAAKTPLGVKAKEAMDQGQLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVV 120
           GDMLRAAVAAKTPLG+KAKEAM++G+LVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVV
Sbjct: 61  GDMLRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVV 120

Query: 121 QAQKLDEMLEKQGVKVDKVLNFAIDDAILEERITGRWIHPPSGRSYHTKFAPPKFPGVDD 180
           QAQKLDEML+KQG K+DKVLNFAIDDAILEERITGRWIHP SGR+YHTKFAPPK  GVDD
Sbjct: 121 QAQKLDEMLQKQGAKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVSGVDD 180

Query: 181 VTGEPLIQRKDDTAAVLKSRLEAFHKQTEPVIDYYSKKHIVANLHAEKPPKEVTAEVEKV 240
           VTGEPLIQRKDDTAAVLKSRLE+FH+QTEPVIDYYSKK IVA+LHAEKPPKEVT+EVEKV
Sbjct: 181 VTGEPLIQRKDDTAAVLKSRLESFHRQTEPVIDYYSKKGIVASLHAEKPPKEVTSEVEKV 240

Query: 241 LS 242
           LS
Sbjct: 241 LS 242


>Medtr4g103800.2 | adenylate kinase | HC | chr4:42939312-42944040 |
           20130731
          Length = 192

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 162/181 (89%), Positives = 173/181 (95%)

Query: 1   MASPNLEDVASVDLMTELLRRMKCAPKPDKRVILIGPPGSGKGTQSPIIKDEYCLCHLAT 60
           MAS NLEDV SVDLM+ELLRR KC+ KPDKR+IL+GPPGSGKGTQSPIIKDEYCLCHLAT
Sbjct: 1   MASSNLEDVPSVDLMSELLRRFKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLAT 60

Query: 61  GDMLRAAVAAKTPLGVKAKEAMDQGQLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVV 120
           GDMLRAAVAAKTPLG+KAKEAM++G+LVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVV
Sbjct: 61  GDMLRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVV 120

Query: 121 QAQKLDEMLEKQGVKVDKVLNFAIDDAILEERITGRWIHPPSGRSYHTKFAPPKFPGVDD 180
           QAQKLDEML+KQG K+DKVLNFAIDDAILEERITGRWIHP SGR+YHTKFAPPK  GVDD
Sbjct: 121 QAQKLDEMLQKQGAKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVSGVDD 180

Query: 181 V 181
           V
Sbjct: 181 V 181


>Medtr4g103800.3 | adenylate kinase | HC | chr4:42939312-42944040 |
           20130731
          Length = 192

 Score =  342 bits (876), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 162/181 (89%), Positives = 173/181 (95%)

Query: 1   MASPNLEDVASVDLMTELLRRMKCAPKPDKRVILIGPPGSGKGTQSPIIKDEYCLCHLAT 60
           MAS NLEDV SVDLM+ELLRR KC+ KPDKR+IL+GPPGSGKGTQSPIIKDEYCLCHLAT
Sbjct: 1   MASSNLEDVPSVDLMSELLRRFKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLAT 60

Query: 61  GDMLRAAVAAKTPLGVKAKEAMDQGQLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVV 120
           GDMLRAAVAAKTPLG+KAKEAM++G+LVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVV
Sbjct: 61  GDMLRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVV 120

Query: 121 QAQKLDEMLEKQGVKVDKVLNFAIDDAILEERITGRWIHPPSGRSYHTKFAPPKFPGVDD 180
           QAQKLDEML+KQG K+DKVLNFAIDDAILEERITGRWIHP SGR+YHTKFAPPK  GVDD
Sbjct: 121 QAQKLDEMLQKQGAKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVSGVDD 180

Query: 181 V 181
           V
Sbjct: 181 V 181


>Medtr4g035170.1 | adenylate kinase | HC | chr4:12046801-12052564 |
           20130731
          Length = 306

 Score =  148 bits (373), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 127/213 (59%), Gaps = 11/213 (5%)

Query: 32  VILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDQGQLVSDD 91
           V++ G P SGKGTQ  +I ++Y L H+A GD+LRA +   +  G +AKE M++GQLV D+
Sbjct: 90  VMISGAPASGKGTQCHLITNKYGLVHVAAGDLLRAEIETGSENGKRAKEYMEKGQLVPDE 149

Query: 92  LVVGIIDEAMKKP-SCQKGFILDGFPRTVVQAQKLDEMLEKQGVKVDKVLNFAIDDAILE 150
           +VV ++ + + KP S + G++LDG+PR++ QA  L E+    G K D  +   + + IL 
Sbjct: 150 IVVMMVKDRLLKPDSVENGWLLDGYPRSLSQATALKEL----GFKPDIFILLEVSEDILV 205

Query: 151 ERITGRWIHPPSGRSYHTKFAPPKFPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEP 210
           ER+ GR + P +G+ YH K++PP+   + D     L QR DDT   +K RL   H+  E 
Sbjct: 206 ERVVGRRLDPVTGKIYHLKYSPPETKEIAD----RLTQRFDDTEEKVKLRLNTHHQNVEA 261

Query: 211 VIDYYSKKHIVANLHAEKPPKEVTAEVEKVLSS 243
           V+  Y  K I   ++     KEV A+++  L++
Sbjct: 262 VLSMY--KDITIKINGNSSQKEVFAQIDGALTT 292


>Medtr2g461290.1 | adenylate kinase | HC | chr2:25307375-25315642 |
           20130731
          Length = 593

 Score =  147 bits (371), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 86/225 (38%), Positives = 131/225 (58%), Gaps = 17/225 (7%)

Query: 22  MKCAPKPDKRVILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEA 81
           + C+     +V++ G P SGKGTQ  +I ++Y L H++TGD+LRA VAA T +G KAKE 
Sbjct: 65  INCSTSEPLKVMISGAPASGKGTQCELIVNKYGLVHISTGDLLRAEVAAGTEIGNKAKEF 124

Query: 82  MDQGQLVSDDLVVGIIDEAMKKPSC----QKGFILDGFPRTVVQAQKLDEMLEKQGVKVD 137
           M+ G+LV D++V  ++   +   SC    QKG++LDG+PR+  QA    E LEK  ++ D
Sbjct: 125 MNAGRLVPDEIVTAMVAARL---SCEDVKQKGWLLDGYPRSFSQA----ESLEKMQIRPD 177

Query: 138 KVLNFAIDDAILEERITGRWIHPPSGRSYHTKFAPPKFPGVDDVTGEPLIQRKDDTAAVL 197
             +   + D IL ER  GR + P +G+ YH KF PP+    +++    L+ R DDT   +
Sbjct: 178 VYIVLDVHDEILIERCVGRRLDPVTGKIYHEKFFPPE---TEEIKAR-LVTRPDDTEEKV 233

Query: 198 KSRLEAFHKQTEPVIDYYSKKHIVANLHAEKPPKEVTAEVEKVLS 242
            SRL  + +  E V   YS  +I   +   +P +EV  ++E +LS
Sbjct: 234 MSRLNIYKQNAESVSSSYS--NITNKIDGSRPKEEVFKDIESLLS 276


>Medtr1g067050.1 | adenylate kinase | HC | chr1:28853082-28857350 |
           20130731
          Length = 286

 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 111/203 (54%), Gaps = 22/203 (10%)

Query: 31  RVILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDQGQLVSD 90
           R + +G PG GKGT +  + +   + H+ATGD++R  +++  PL  +  E + QGQLVSD
Sbjct: 55  RWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVREELSSSGPLSSQLSEIVKQGQLVSD 114

Query: 91  DLVVGIIDEAMK--KPSCQKGFILDGFPRTVVQAQKLDEMLEKQGVKVDKVLNFAIDDAI 148
           ++++ ++ + +   +   + GFILDGFPRT+ QA+ L+ + +     +D V+N  + + +
Sbjct: 115 EIIINLLSKRLDDGEAKGELGFILDGFPRTIKQAEILEGVAD-----IDLVINLRLPENV 169

Query: 149 LEERITGRWIHPPSGRSYHTK-------------FAPPKFPGVDDVTGEPLIQRKDDTAA 195
           L E+  GR I    G +++                  P  P  D ++   LI R DDT A
Sbjct: 170 LLEKCLGRRICNQCGGNFNVASIDIKAENGIPGIVMAPLLPPTDCMS--KLITRSDDTEA 227

Query: 196 VLKSRLEAFHKQTEPVIDYYSKK 218
           V+K RL  +++ + PV ++Y  +
Sbjct: 228 VVKERLRIYNETSRPVEEFYRSR 250


>Medtr7g100530.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr7:40481478-40478498 |
           20130731
          Length = 268

 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 113/208 (54%), Gaps = 20/208 (9%)

Query: 26  PKPDKRV--ILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMD 83
           P+ ++ +  + +G PG GKGT +  + +   + H+ATGD++R  +++  PL  +  E ++
Sbjct: 31  PRENRNIQWVFLGCPGVGKGTYASRLCNLLGVPHIATGDLVRHELSSNGPLSSQLSEIVN 90

Query: 84  QGQLVSDDLVVGIIDEAMKKPSC--QKGFILDGFPRTVVQAQKLDEMLEKQGVKVDKVLN 141
           QGQLVSD++++ ++ + + +     + GFILDGFPRT+ QA+ L+ + +     +D V+N
Sbjct: 91  QGQLVSDEIIMSLLSKRLAEGQAKGESGFILDGFPRTIKQAEILEGVTD-----IDLVVN 145

Query: 142 FAIDDAILEERITGRWIHPPSGRSYHTKFAPPKFP-GVDDVTGEP----------LIQRK 190
             I +  L  +  GR      G +++      K   G   ++ +P          LI R 
Sbjct: 146 LKIREEALLAKCLGRRTCSQCGGNFNVASINIKGENGCPGISMDPLLPPEHCMSKLITRS 205

Query: 191 DDTAAVLKSRLEAFHKQTEPVIDYYSKK 218
           DDT  V+K RL  +++ ++PV  +Y  +
Sbjct: 206 DDTEPVVKERLRIYNELSQPVEGFYRSR 233


>Medtr8g009520.1 | UMP-CMP kinase family protein | HC |
           chr8:2227119-2223648 | 20130731
          Length = 208

 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 33/211 (15%)

Query: 32  VILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAMDQGQLVSDD 91
           V ++G PGSGKGTQ   + + +   HL+ GD+LRA + + +  G   +  + +G++V  +
Sbjct: 24  VFVLGGPGSGKGTQCANVVEHFGFTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSE 83

Query: 92  LVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKQGVKVDKVLNFAIDDAILEE 151
           + + ++ +A+K     K F++DGFPR        + +    G++   VL F   +  +E 
Sbjct: 84  VTIRLLQQAIKDNGNDK-FLIDGFPRNEENRAAFERV---TGIEPAFVLYFDCPEEEMER 139

Query: 152 RITGRWIHPPSGRSYHTKFAPPKFPGVDDVTGEPLIQRKDDTAAVLKSRLEAFHKQTEPV 211
           R+  R                                R+DD    ++ R + F   + PV
Sbjct: 140 RLLSRNQG-----------------------------REDDNIETIRKRFKVFLDSSLPV 170

Query: 212 IDYYSKKHIVANLHAEKPPKEVTAEVEKVLS 242
           I+YY  K  V  + A +P +EV   V+ +  
Sbjct: 171 INYYDAKGKVRKVDAARPVEEVFESVKAIFG 201


>Medtr5g068940.1 | uridylate kinase-like protein | HC |
           chr5:29183060-29178755 | 20130731
          Length = 218

 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 35/221 (15%)

Query: 25  APKPDKRVI--LIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAM 82
           +PK    VI  ++G PGSGKGTQ   I + +   HL+ GD+LR A+ + +  G    E +
Sbjct: 25  SPKHMDSVITFVLGGPGSGKGTQCARIVETFGFKHLSAGDLLRKAMVSDSEYGAMILETI 84

Query: 83  DQGQLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKQGVKVDKVLNF 142
            +G++V   + V +I   M+    +K F++DGFPR+       + +    G + D VL F
Sbjct: 85  REGRIVPSAVTVRLILREMQYGDNRK-FLIDGFPRSEENRIAFEHI---TGTEPDFVLYF 140

Query: 143 AIDDAILEERITGRWIHPPSGRSYHTKFAPPKFPGVDDVTGEPLIQRKDDTAAVLKSRLE 202
                  EE +  R +    GR                          DD    +K RL+
Sbjct: 141 DCP----EEEMVKRVLSRNQGRI-------------------------DDNIDTIKKRLK 171

Query: 203 AFHKQTEPVIDYYSKKHIVANLHAEKPPKEVTAEVEKVLSS 243
            F     PVID+Y+++  +  ++A     E+  +V  V ++
Sbjct: 172 VFEALNLPVIDHYARRGRLHRINAVGTEDEIFEQVRPVFAA 212


>Medtr4g035850.1 | uridylate kinase-like protein | HC |
           chr4:12665969-12671433 | 20130731
          Length = 241

 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 35/221 (15%)

Query: 25  APKPDKRVI--LIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAM 82
           +PK    VI  ++G PGSGKGTQ   I + +   HL+ GD+LR  + + +  G    E +
Sbjct: 48  SPKHMDSVITFVLGGPGSGKGTQCARIVETFGFKHLSAGDLLRKEMVSDSEYGAMILETI 107

Query: 83  DQGQLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKQGVKVDKVLNF 142
            +G++V   + V +I   M+    +K F++DGFPR+       + +    G + D VL F
Sbjct: 108 REGRIVPSAVTVRLILREMQYGDNRK-FLIDGFPRSEENRIAFEHI---TGTEPDFVLFF 163

Query: 143 AIDDAILEERITGRWIHPPSGRSYHTKFAPPKFPGVDDVTGEPLIQRKDDTAAVLKSRLE 202
                  EE +  R +    GR                          DD    +K RL+
Sbjct: 164 DCP----EEEMVKRVLSRNQGRI-------------------------DDNIDTIKKRLK 194

Query: 203 AFHKQTEPVIDYYSKKHIVANLHAEKPPKEVTAEVEKVLSS 243
            F     PVID+Y+++  +  ++A     E+  +V  V ++
Sbjct: 195 VFEALNLPVIDHYARRGRLHRINAVGTEDEIFEQVRPVFAA 235


>Medtr4g035850.2 | uridylate kinase-like protein | HC |
           chr4:12665969-12671433 | 20130731
          Length = 218

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 35/221 (15%)

Query: 25  APKPDKRVI--LIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGVKAKEAM 82
           +PK    VI  ++G PGSGKGTQ   I + +   HL+ GD+LR  + + +  G    E +
Sbjct: 25  SPKHMDSVITFVLGGPGSGKGTQCARIVETFGFKHLSAGDLLRKEMVSDSEYGAMILETI 84

Query: 83  DQGQLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAQKLDEMLEKQGVKVDKVLNF 142
            +G++V   + V +I   M+    +K F++DGFPR+       + +    G + D VL F
Sbjct: 85  REGRIVPSAVTVRLILREMQYGDNRK-FLIDGFPRSEENRIAFEHI---TGTEPDFVLFF 140

Query: 143 AIDDAILEERITGRWIHPPSGRSYHTKFAPPKFPGVDDVTGEPLIQRKDDTAAVLKSRLE 202
                  EE +  R +    GR                          DD    +K RL+
Sbjct: 141 DCP----EEEMVKRVLSRNQGRI-------------------------DDNIDTIKKRLK 171

Query: 203 AFHKQTEPVIDYYSKKHIVANLHAEKPPKEVTAEVEKVLSS 243
            F     PVID+Y+++  +  ++A     E+  +V  V ++
Sbjct: 172 VFEALNLPVIDHYARRGRLHRINAVGTEDEIFEQVRPVFAA 212