Miyakogusa Predicted Gene

Lj0g3v0255149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0255149.1 tr|G7I3E3|G7I3E3_MEDTR Appr-1-p processing enzyme
family protein OS=Medicago truncatula GN=MTR_1g007,80.4,0,Appr-1"-p
processing enzyme,Appr-1-p processing; seg,NULL; LOC799852 PROTEIN
(FRAGMENT),NULL; GANGLI,NODE_47902_length_923_cov_60.669556.path1.1
         (204 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g007640.1 | appr-1-P processing enzyme family protein | HC...   340   8e-94
Medtr5g043560.1 | appr-1-P processing enzyme family protein | HC...    74   1e-13
Medtr5g043560.2 | appr-1-P processing enzyme family protein | HC...    74   1e-13
Medtr4g082640.1 | appr-1-P processing enzyme family protein | HC...    72   3e-13

>Medtr1g007640.1 | appr-1-P processing enzyme family protein | HC |
           chr1:472208-476611 | 20130731
          Length = 233

 Score =  340 bits (871), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 161/199 (80%), Positives = 179/199 (89%), Gaps = 1/199 (0%)

Query: 1   MDAPARASASSNGAV-RFPLSPTTALIIQQGDITQWSIDSSSDAIVNPANERMLGGGGAD 59
           M+  A AS++ NG V RFPLS + ALIIQ+GDIT+WSID S+DAIVNPANERMLGGGGAD
Sbjct: 34  MNTSAMASSNGNGGVVRFPLSSSNALIIQKGDITKWSIDGSTDAIVNPANERMLGGGGAD 93

Query: 60  GAIHRAAGPELLQACYSVPEVRRGVRCPVGEARITPGFRLPVSHVVHTVGPIYHSNSDPA 119
           GAIHRAAGP+LL+AC +VPEVR GVRCP GEARITPGF LP SHV+HTVGPIY  +S+PA
Sbjct: 94  GAIHRAAGPDLLRACRNVPEVRPGVRCPTGEARITPGFLLPASHVIHTVGPIYDVDSNPA 153

Query: 120 TSLASAYRNSLRVAKEKNIQYIAFPAISCGVYGYPYDEAATVAISTIKEFQNDFKEVHFV 179
            SLASAYRNSLRVAKE NIQYIAFPAISCGVYGYPYDEAATVAISTIKEFQNDFKEVHFV
Sbjct: 154 ASLASAYRNSLRVAKENNIQYIAFPAISCGVYGYPYDEAATVAISTIKEFQNDFKEVHFV 213

Query: 180 LFLRDIYEVWLNKANDLLK 198
           LF+ DIY+ WLNK+++LLK
Sbjct: 214 LFMSDIYDTWLNKSDELLK 232


>Medtr5g043560.1 | appr-1-P processing enzyme family protein | HC |
           chr5:19148819-19137379 | 20130731
          Length = 560

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 19/182 (10%)

Query: 2   DAPARASASSNGA----VRFPLSP--TTALIIQQGDITQWSIDSSSDAIVNPANERMLGG 55
           D  A  S + NGA     RFP+     + L + +GD   W+++   DA+VN  NE +   
Sbjct: 56  DPLAFQSGTGNGAGGSVSRFPVDHEINSRLYLWRGD--PWNLEV--DAVVNSTNEALDEA 111

Query: 56  GGADGAIHRAAGPELLQACYSVPEVRRGVRCPVGEARITPGFRLPVSHVVHTVGPIYHSN 115
             + G +H AAGP L + C ++        C  G A+++  + LP   V+HTVGP Y   
Sbjct: 112 HSSPG-LHAAAGPGLAEECATLGG------CRTGMAKVSNAYDLPARKVIHTVGPKYAVK 164

Query: 116 SDPA--TSLASAYRNSLRVAKEKNIQYIAFPAISCGVYGYPYDEAATVAISTIKEFQNDF 173
              A   +L+  YR+ L +  E  ++ IA   I      YP + AA VAI T++ F    
Sbjct: 165 YHTAAENALSHCYRSCLELLIENGLRSIAMGCIYTDAKNYPREPAAHVAIRTVRRFLEKQ 224

Query: 174 KE 175
           K+
Sbjct: 225 KD 226


>Medtr5g043560.2 | appr-1-P processing enzyme family protein | HC |
           chr5:19148819-19137379 | 20130731
          Length = 539

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 19/182 (10%)

Query: 2   DAPARASASSNGA----VRFPLSP--TTALIIQQGDITQWSIDSSSDAIVNPANERMLGG 55
           D  A  S + NGA     RFP+     + L + +GD   W+++   DA+VN  NE +   
Sbjct: 56  DPLAFQSGTGNGAGGSVSRFPVDHEINSRLYLWRGD--PWNLEV--DAVVNSTNEALDEA 111

Query: 56  GGADGAIHRAAGPELLQACYSVPEVRRGVRCPVGEARITPGFRLPVSHVVHTVGPIYHSN 115
             + G +H AAGP L + C ++        C  G A+++  + LP   V+HTVGP Y   
Sbjct: 112 HSSPG-LHAAAGPGLAEECATLGG------CRTGMAKVSNAYDLPARKVIHTVGPKYAVK 164

Query: 116 SDPA--TSLASAYRNSLRVAKEKNIQYIAFPAISCGVYGYPYDEAATVAISTIKEFQNDF 173
              A   +L+  YR+ L +  E  ++ IA   I      YP + AA VAI T++ F    
Sbjct: 165 YHTAAENALSHCYRSCLELLIENGLRSIAMGCIYTDAKNYPREPAAHVAIRTVRRFLEKQ 224

Query: 174 KE 175
           K+
Sbjct: 225 KD 226


>Medtr4g082640.1 | appr-1-P processing enzyme family protein | HC |
           chr4:32173838-32166307 | 20130731
          Length = 556

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 78/169 (46%), Gaps = 11/169 (6%)

Query: 3   APARASASSNGAVRFPLSPTTALIIQQGDITQWSIDSSSDAIVNPANERMLGGGGADGAI 62
           A A  +  S    RFP+       I       W+++   DA+VN  NE M     + G +
Sbjct: 57  ASASGADGSTSVSRFPVDHEINSRIYLWRGNPWNLEV--DAVVNSTNENMDEAHSSPG-L 113

Query: 63  HRAAGPELLQACYSVPEVRRGVRCPVGEARITPGFRLPVSHVVHTVGPIYHSNSDPA--T 120
           H AAGP L + C ++        C  G A++T  + LP   ++HTVGP Y      A   
Sbjct: 114 HDAAGPGLAEECATLGG------CRTGMAKVTNAYDLPARRIIHTVGPKYAVKYHTAAEN 167

Query: 121 SLASAYRNSLRVAKEKNIQYIAFPAISCGVYGYPYDEAATVAISTIKEF 169
           +L+  YR+ L +  +  ++ IA   I      YP + AA VAI T++ F
Sbjct: 168 ALSHCYRSCLELLVDSGLRSIAMGCIYTEAKNYPREPAAHVAIRTVRRF 216