Miyakogusa Predicted Gene

Lj0g3v0254459.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0254459.1 Non Characterized Hit- tr|I3T709|I3T709_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,71.21,2e-18,
,CUFF.16695.1
         (66 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g076220.3 | transmembrane protein, putative | HC | chr8:32...    75   1e-14
Medtr8g076220.2 | transmembrane protein, putative | HC | chr8:32...    75   1e-14
Medtr8g076220.1 | transmembrane protein, putative | HC | chr8:32...    75   1e-14

>Medtr8g076220.3 | transmembrane protein, putative | HC |
          chr8:32282629-32278679 | 20130731
          Length = 282

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/66 (62%), Positives = 44/66 (66%)

Query: 1  MTVSGLSGCLSRCLHLTTGCLASPHVRVLFNPVPGKHKQGTACLQLERTSFSSLRLNCNK 60
          M VSGLSG LSRC  L   CL S HVRV+   V GK  Q TA   +ERTSFSS RL CN+
Sbjct: 1  MIVSGLSGSLSRCPQLPPRCLESRHVRVMSFSVAGKCIQRTAFPSVERTSFSSPRLKCNR 60

Query: 61 RQVHLV 66
          RQV LV
Sbjct: 61 RQVQLV 66


>Medtr8g076220.2 | transmembrane protein, putative | HC |
          chr8:32282020-32278679 | 20130731
          Length = 282

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/66 (62%), Positives = 44/66 (66%)

Query: 1  MTVSGLSGCLSRCLHLTTGCLASPHVRVLFNPVPGKHKQGTACLQLERTSFSSLRLNCNK 60
          M VSGLSG LSRC  L   CL S HVRV+   V GK  Q TA   +ERTSFSS RL CN+
Sbjct: 1  MIVSGLSGSLSRCPQLPPRCLESRHVRVMSFSVAGKCIQRTAFPSVERTSFSSPRLKCNR 60

Query: 61 RQVHLV 66
          RQV LV
Sbjct: 61 RQVQLV 66


>Medtr8g076220.1 | transmembrane protein, putative | HC |
          chr8:32282744-32278679 | 20130731
          Length = 282

 Score = 75.1 bits (183), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/66 (62%), Positives = 44/66 (66%)

Query: 1  MTVSGLSGCLSRCLHLTTGCLASPHVRVLFNPVPGKHKQGTACLQLERTSFSSLRLNCNK 60
          M VSGLSG LSRC  L   CL S HVRV+   V GK  Q TA   +ERTSFSS RL CN+
Sbjct: 1  MIVSGLSGSLSRCPQLPPRCLESRHVRVMSFSVAGKCIQRTAFPSVERTSFSSPRLKCNR 60

Query: 61 RQVHLV 66
          RQV LV
Sbjct: 61 RQVQLV 66